{"id":"https://openalex.org/W2890863347","doi":"https://doi.org/10.1093/database/bay087","title":"MetaHCR: a web-enabled metagenome data management system for hydrocarbon resources","display_name":"MetaHCR: a web-enabled metagenome data management system for hydrocarbon resources","publication_year":2018,"publication_date":"2018-01-01","ids":{"openalex":"https://openalex.org/W2890863347","doi":"https://doi.org/10.1093/database/bay087","mag":"2890863347","pmid":"https://pubmed.ncbi.nlm.nih.gov/30212909"},"language":"en","primary_location":{"id":"doi:10.1093/database/bay087","is_oa":true,"landing_page_url":"https://doi.org/10.1093/database/bay087","pdf_url":"https://academic.oup.com/database/article-pdf/doi/10.1093/database/bay087/27329445/bay087.pdf","source":{"id":"https://openalex.org/S4210201630","display_name":"Database","issn_l":"1758-0463","issn":["1758-0463"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311647","host_organization_name":"University of Oxford","host_organization_lineage":["https://openalex.org/P4310311647"],"host_organization_lineage_names":["University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Database","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://academic.oup.com/database/article-pdf/doi/10.1093/database/bay087/27329445/bay087.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5060671000","display_name":"Peter C. Marks","orcid":null},"institutions":[{"id":"https://openalex.org/I4210150951","display_name":"Shell (United States)","ror":"https://ror.org/04wedba92","country_code":"US","type":"company","lineage":["https://openalex.org/I4210150951","https://openalex.org/I7923278"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Peter C Marks","raw_affiliation_strings":["Shell International Exploration and Production Inc., Houston, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Shell International Exploration and Production Inc., Houston, USA","institution_ids":["https://openalex.org/I4210150951"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5091637080","display_name":"Marc B. Bigler","orcid":"https://orcid.org/0000-0002-8232-6228"},"institutions":[{"id":"https://openalex.org/I4210143948","display_name":"\u00c9cole Sup\u00e9rieure de Biotechnologie de Strasbourg","ror":"https://ror.org/05eyymj94","country_code":"FR","type":"education","lineage":["https://openalex.org/I4210143948"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Marc Bigler","raw_affiliation_strings":["Ecole Sup\u00e9rieure de Biotechnologie Strasbourg, Illkirch-Graffenstaden, France"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Ecole Sup\u00e9rieure de Biotechnologie Strasbourg, Illkirch-Graffenstaden, France","institution_ids":["https://openalex.org/I4210143948"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5035552644","display_name":"Eric Alsop","orcid":"https://orcid.org/0000-0002-2717-7573"},"institutions":[{"id":"https://openalex.org/I196679689","display_name":"Joint Genome Institute","ror":"https://ror.org/04xm1d337","country_code":"US","type":"facility","lineage":["https://openalex.org/I1330989302","https://openalex.org/I148283060","https://openalex.org/I196679689","https://openalex.org/I39565521"]},{"id":"https://openalex.org/I4210150951","display_name":"Shell (United States)","ror":"https://ror.org/04wedba92","country_code":"US","type":"company","lineage":["https://openalex.org/I4210150951","https://openalex.org/I7923278"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Eric B Alsop","raw_affiliation_strings":["DOE Joint Genome Institute,Walnut Creek, California, USA","Shell International Exploration and Production Inc., Houston, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"DOE Joint Genome Institute,Walnut Creek, California, USA","institution_ids":["https://openalex.org/I196679689"]},{"raw_affiliation_string":"Shell International Exploration and Production Inc., Houston, USA","institution_ids":["https://openalex.org/I4210150951"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5023361775","display_name":"Adrien Vigneron","orcid":"https://orcid.org/0000-0003-3552-8369"},"institutions":[{"id":"https://openalex.org/I4210150951","display_name":"Shell (United States)","ror":"https://ror.org/04wedba92","country_code":"US","type":"company","lineage":["https://openalex.org/I4210150951","https://openalex.org/I7923278"]},{"id":"https://openalex.org/I84884186","display_name":"Newcastle University","ror":"https://ror.org/01kj2bm70","country_code":"GB","type":"education","lineage":["https://openalex.org/I84884186"]}],"countries":["GB","US"],"is_corresponding":false,"raw_author_name":"Adrien Vigneron","raw_affiliation_strings":["School of Natural and Environmental Sciences, Newcastle University, Newcastle upon Tyne, UK","Shell International Exploration and Production Inc., Houston, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Natural and Environmental Sciences, Newcastle University, Newcastle upon Tyne, UK","institution_ids":["https://openalex.org/I84884186"]},{"raw_affiliation_string":"Shell International Exploration and Production Inc., Houston, USA","institution_ids":["https://openalex.org/I4210150951"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5112513283","display_name":"Bart P. Lomans","orcid":null},"institutions":[{"id":"https://openalex.org/I7923278","display_name":"Shell (Netherlands)","ror":"https://ror.org/00b5m4j81","country_code":"NL","type":"company","lineage":["https://openalex.org/I7923278"]}],"countries":["NL"],"is_corresponding":false,"raw_author_name":"Bart P Lomans","raw_affiliation_strings":["Shell Global Solutions International B.V., HW Amsterdam, Netherlands"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Shell Global Solutions International B.V., HW Amsterdam, Netherlands","institution_ids":["https://openalex.org/I7923278"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5085922586","display_name":"Renato De Paula","orcid":"https://orcid.org/0000-0002-5835-5918"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Renato De Paula","raw_affiliation_strings":["RD & E Microbiology Group, NALCO Champion, Sugar Land, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"RD & E Microbiology Group, NALCO Champion, Sugar Land, USA","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5038891321","display_name":"Brett Geissler","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Brett Geissler","raw_affiliation_strings":["RD & E Microbiology Group, NALCO Champion, Sugar Land, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"RD & E Microbiology Group, NALCO Champion, Sugar Land, USA","institution_ids":[]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5042355184","display_name":"Nicolas Tsesmetzis","orcid":"https://orcid.org/0000-0001-5246-0568"},"institutions":[{"id":"https://openalex.org/I4210150951","display_name":"Shell (United States)","ror":"https://ror.org/04wedba92","country_code":"US","type":"company","lineage":["https://openalex.org/I4210150951","https://openalex.org/I7923278"]},{"id":"https://openalex.org/I84884186","display_name":"Newcastle University","ror":"https://ror.org/01kj2bm70","country_code":"GB","type":"education","lineage":["https://openalex.org/I84884186"]}],"countries":["GB","US"],"is_corresponding":true,"raw_author_name":"Nicolas Tsesmetzis","raw_affiliation_strings":["School of Natural and Environmental Sciences, Newcastle University, Newcastle upon Tyne, UK","Shell International Exploration and Production Inc., Houston, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Natural and Environmental Sciences, Newcastle University, Newcastle upon Tyne, UK","institution_ids":["https://openalex.org/I84884186"]},{"raw_affiliation_string":"Shell International Exploration and Production Inc., Houston, USA","institution_ids":["https://openalex.org/I4210150951"]}]}],"institutions":[],"countries_distinct_count":4,"institutions_distinct_count":5,"corresponding_author_ids":["https://openalex.org/A5042355184"],"corresponding_institution_ids":["https://openalex.org/I4210150951","https://openalex.org/I84884186"],"apc_list":{"value":1415,"currency":"GBP","value_usd":1735},"apc_paid":{"value":1415,"currency":"GBP","value_usd":1735},"fwci":0.0824,"has_fulltext":true,"cited_by_count":2,"citation_normalized_percentile":{"value":0.43618282,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":97},"biblio":{"volume":"2018","issue":null,"first_page":"1","last_page":"10"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9987000226974487,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9987000226974487,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11791","display_name":"Microbial Community Ecology and Physiology","score":0.9958000183105469,"subfield":{"id":"https://openalex.org/subfields/2303","display_name":"Ecology"},"field":{"id":"https://openalex.org/fields/23","display_name":"Environmental Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10885","display_name":"Gene expression and cancer classification","score":0.9898999929428101,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/metagenomics","display_name":"Metagenomics","score":0.8969376087188721},{"id":"https://openalex.org/keywords/contextualization","display_name":"Contextualization","score":0.8187131881713867},{"id":"https://openalex.org/keywords/metadata","display_name":"Metadata","score":0.8166794180870056},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6571356654167175},{"id":"https://openalex.org/keywords/modular-design","display_name":"Modular design","score":0.49355900287628174},{"id":"https://openalex.org/keywords/web-resource","display_name":"Web resource","score":0.4589262306690216},{"id":"https://openalex.org/keywords/metadata-management","display_name":"Metadata management","score":0.45089319348335266},{"id":"https://openalex.org/keywords/resource","display_name":"Resource (disambiguation)","score":0.4349452257156372},{"id":"https://openalex.org/keywords/information-retrieval","display_name":"Information retrieval","score":0.41885268688201904},{"id":"https://openalex.org/keywords/data-science","display_name":"Data science","score":0.4012010991573334},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.36549603939056396},{"id":"https://openalex.org/keywords/world-wide-web","display_name":"World Wide Web","score":0.3166005611419678},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.18419361114501953}],"concepts":[{"id":"https://openalex.org/C15151743","wikidata":"https://www.wikidata.org/wiki/Q903778","display_name":"Metagenomics","level":3,"score":0.8969376087188721},{"id":"https://openalex.org/C2780712339","wikidata":"https://www.wikidata.org/wiki/Q5165204","display_name":"Contextualization","level":3,"score":0.8187131881713867},{"id":"https://openalex.org/C93518851","wikidata":"https://www.wikidata.org/wiki/Q180160","display_name":"Metadata","level":2,"score":0.8166794180870056},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6571356654167175},{"id":"https://openalex.org/C101468663","wikidata":"https://www.wikidata.org/wiki/Q1620158","display_name":"Modular design","level":2,"score":0.49355900287628174},{"id":"https://openalex.org/C65603577","wikidata":"https://www.wikidata.org/wiki/Q3427877","display_name":"Web resource","level":2,"score":0.4589262306690216},{"id":"https://openalex.org/C2779489174","wikidata":"https://www.wikidata.org/wiki/Q6822246","display_name":"Metadata management","level":3,"score":0.45089319348335266},{"id":"https://openalex.org/C206345919","wikidata":"https://www.wikidata.org/wiki/Q20380951","display_name":"Resource (disambiguation)","level":2,"score":0.4349452257156372},{"id":"https://openalex.org/C23123220","wikidata":"https://www.wikidata.org/wiki/Q816826","display_name":"Information retrieval","level":1,"score":0.41885268688201904},{"id":"https://openalex.org/C2522767166","wikidata":"https://www.wikidata.org/wiki/Q2374463","display_name":"Data science","level":1,"score":0.4012010991573334},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.36549603939056396},{"id":"https://openalex.org/C136764020","wikidata":"https://www.wikidata.org/wiki/Q466","display_name":"World Wide Web","level":1,"score":0.3166005611419678},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.18419361114501953},{"id":"https://openalex.org/C111919701","wikidata":"https://www.wikidata.org/wiki/Q9135","display_name":"Operating system","level":1,"score":0.0},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.0},{"id":"https://openalex.org/C527412718","wikidata":"https://www.wikidata.org/wiki/Q855395","display_name":"Interpretation (philosophy)","level":2,"score":0.0},{"id":"https://openalex.org/C31258907","wikidata":"https://www.wikidata.org/wiki/Q1301371","display_name":"Computer network","level":1,"score":0.0},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.0},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D006838","descriptor_name":"Hydrocarbons","qualifier_ui":"Q000032","qualifier_name":"analysis","is_major_topic":false},{"descriptor_ui":"D006838","descriptor_name":"Hydrocarbons","qualifier_ui":"Q000032","qualifier_name":"analysis","is_major_topic":false},{"descriptor_ui":"D006838","descriptor_name":"Hydrocarbons","qualifier_ui":"Q000032","qualifier_name":"analysis","is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D054892","descriptor_name":"Metagenome","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D054892","descriptor_name":"Metagenome","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D054892","descriptor_name":"Metagenome","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true}],"locations_count":4,"locations":[{"id":"doi:10.1093/database/bay087","is_oa":true,"landing_page_url":"https://doi.org/10.1093/database/bay087","pdf_url":"https://academic.oup.com/database/article-pdf/doi/10.1093/database/bay087/27329445/bay087.pdf","source":{"id":"https://openalex.org/S4210201630","display_name":"Database","issn_l":"1758-0463","issn":["1758-0463"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311647","host_organization_name":"University of Oxford","host_organization_lineage":["https://openalex.org/P4310311647"],"host_organization_lineage_names":["University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Database","raw_type":"journal-article"},{"id":"pmid:30212909","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/30212909","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Database : the journal of biological databases and curation","raw_type":null},{"id":"pmh:oai:europepmc.org:5099534","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/6146120","pdf_url":null,"source":{"id":"https://openalex.org/S4306400806","display_name":"Europe PMC (PubMed Central)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1303153112","host_organization_name":"European Bioinformatics Institute","host_organization_lineage":["https://openalex.org/I1303153112"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Text"},{"id":"pmh:oai:osti.gov:1625310","is_oa":true,"landing_page_url":"https://www.osti.gov/biblio/1625310","pdf_url":null,"source":{"id":"https://openalex.org/S4306402487","display_name":"OSTI OAI (U.S. Department of Energy Office of Scientific and Technical Information)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I139351228","host_organization_name":"Office of Scientific and Technical Information","host_organization_lineage":["https://openalex.org/I139351228"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":null}],"best_oa_location":{"id":"doi:10.1093/database/bay087","is_oa":true,"landing_page_url":"https://doi.org/10.1093/database/bay087","pdf_url":"https://academic.oup.com/database/article-pdf/doi/10.1093/database/bay087/27329445/bay087.pdf","source":{"id":"https://openalex.org/S4210201630","display_name":"Database","issn_l":"1758-0463","issn":["1758-0463"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311647","host_organization_name":"University of Oxford","host_organization_lineage":["https://openalex.org/P4310311647"],"host_organization_lineage_names":["University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Database","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G1286236842","display_name":null,"funder_award_id":"-AC02-05CH11231","funder_id":"https://openalex.org/F4320306084","funder_display_name":"U.S. Department of Energy"},{"id":"https://openalex.org/G3083819904","display_name":null,"funder_award_id":"05CH11231","funder_id":"https://openalex.org/F4320306084","funder_display_name":"U.S. Department of Energy"},{"id":"https://openalex.org/G4501827968","display_name":null,"funder_award_id":"AC02-05CH11231","funder_id":"https://openalex.org/F4320332359","funder_display_name":"Office of Science"},{"id":"https://openalex.org/G4565140552","display_name":null,"funder_award_id":"-AC02-05CH11231","funder_id":"https://openalex.org/F4320332359","funder_display_name":"Office of Science"},{"id":"https://openalex.org/G498139845","display_name":null,"funder_award_id":"DE-AC02","funder_id":"https://openalex.org/F4320332359","funder_display_name":"Office of Science"},{"id":"https://openalex.org/G5183079102","display_name":null,"funder_award_id":"10202","funder_id":"https://openalex.org/F4320310787","funder_display_name":"Genome Canada"},{"id":"https://openalex.org/G5602503670","display_name":null,"funder_award_id":"DE-AC02-05CH11231","funder_id":"https://openalex.org/F4320316170","funder_display_name":"Joint Genome Institute"},{"id":"https://openalex.org/G6348972864","display_name":null,"funder_award_id":"AC02-05CH11231","funder_id":"https://openalex.org/F4320306084","funder_display_name":"U.S. Department of Energy"},{"id":"https://openalex.org/G6558272803","display_name":null,"funder_award_id":"DE-AC02","funder_id":"https://openalex.org/F4320306084","funder_display_name":"U.S. Department of Energy"},{"id":"https://openalex.org/G7205239661","display_name":null,"funder_award_id":"AC02-05CH11231","funder_id":"https://openalex.org/F4320316170","funder_display_name":"Joint Genome Institute"},{"id":"https://openalex.org/G7368046788","display_name":null,"funder_award_id":"DE-AC02-05CH11231","funder_id":"https://openalex.org/F4320306084","funder_display_name":"U.S. Department of Energy"},{"id":"https://openalex.org/G969889393","display_name":null,"funder_award_id":"DE-AC02-","funder_id":"https://openalex.org/F4320306084","funder_display_name":"U.S. Department of Energy"}],"funders":[{"id":"https://openalex.org/F4320306084","display_name":"U.S. Department of Energy","ror":"https://ror.org/01bj3aw27"},{"id":"https://openalex.org/F4320307816","display_name":"Shell","ror":"https://ror.org/00b5m4j81"},{"id":"https://openalex.org/F4320310787","display_name":"Genome Canada","ror":"https://ror.org/029s29983"},{"id":"https://openalex.org/F4320316170","display_name":"Joint Genome Institute","ror":"https://ror.org/04xm1d337"},{"id":"https://openalex.org/F4320316852","display_name":"Shell Global Solutions International","ror":null},{"id":"https://openalex.org/F4320332359","display_name":"Office of Science","ror":"https://ror.org/00mmn6b08"}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2890863347.pdf","grobid_xml":"https://content.openalex.org/works/W2890863347.grobid-xml"},"referenced_works_count":50,"referenced_works":["https://openalex.org/W1490137556","https://openalex.org/W1525521077","https://openalex.org/W1576707831","https://openalex.org/W1651004564","https://openalex.org/W1976514666","https://openalex.org/W1988794341","https://openalex.org/W1989348205","https://openalex.org/W2000259070","https://openalex.org/W2014559751","https://openalex.org/W2040704692","https://openalex.org/W2064632793","https://openalex.org/W2072970694","https://openalex.org/W2085926377","https://openalex.org/W2095909724","https://openalex.org/W2097877306","https://openalex.org/W2103017472","https://openalex.org/W2108718991","https://openalex.org/W2113142309","https://openalex.org/W2123152121","https://openalex.org/W2123171788","https://openalex.org/W2129687578","https://openalex.org/W2130956021","https://openalex.org/W2156296225","https://openalex.org/W2168099578","https://openalex.org/W2281609546","https://openalex.org/W2530686607","https://openalex.org/W6629169928","https://openalex.org/W6631642569","https://openalex.org/W6636848685","https://openalex.org/W6644401444","https://openalex.org/W6647407410","https://openalex.org/W6647441512","https://openalex.org/W6650715021","https://openalex.org/W6654163678","https://openalex.org/W6660530569","https://openalex.org/W6666355140","https://openalex.org/W6668563363","https://openalex.org/W6671909064","https://openalex.org/W6674519627","https://openalex.org/W6674627641","https://openalex.org/W6676100584","https://openalex.org/W6677003940","https://openalex.org/W6678028490","https://openalex.org/W6678466468","https://openalex.org/W6679412497","https://openalex.org/W6683049075","https://openalex.org/W6684432171","https://openalex.org/W6695574317","https://openalex.org/W6728397085","https://openalex.org/W7073800979"],"related_works":["https://openalex.org/W2374913837","https://openalex.org/W2460834149","https://openalex.org/W1512114296","https://openalex.org/W2907247951","https://openalex.org/W2354316773","https://openalex.org/W2376038160","https://openalex.org/W4205875026","https://openalex.org/W2389651964","https://openalex.org/W3181164120","https://openalex.org/W2001042954"],"abstract_inverted_index":{"The":[0,88],"ever-increasing":[1],"metagenomic":[2,168],"data":[3,29,90,107],"necessitate":[4],"appropriate":[5],"cataloguing":[6],"in":[7],"a":[8,79,143],"way":[9],"that":[10],"facilitates":[11],"the":[12,18,27,33,37,98,128,137,154],"comparison":[13],"and":[14,36,67,103,120,147,151,170,183],"better":[15],"contextualization":[16,66],"of":[17,100,156,181],"underlying":[19],"investigations.":[20],"To":[21,46],"this":[22],"extent,":[23],"information":[24],"associated":[25,115],"with":[26,116,164],"sequencing":[28,71,106],"as":[30,32,108,110],"well":[31,109],"original":[34],"sample":[35],"environment":[38],"where":[39],"it":[40,141,152],"was":[41],"obtained":[42],"from":[43,74,136],"is":[44,77],"crucial.":[45],"date,":[47],"there":[48],"are":[49],"not":[50],"any":[51,132],"publicly":[52,166],"available":[53,167],"repositories":[54],"able":[55],"to":[56,61,78],"capture":[57],"environmental":[58,182],"metadata":[59],"pertaining":[60],"hydrocarbon-rich":[62],"environments.":[63],"As":[64],"such,":[65],"comparative":[68],"analysis":[69],"among":[70,123],"datasets":[72],"derived":[73],"these":[75],"environments":[76,119],"certain":[80],"degree":[81],"hindered":[82],"or":[83],"cannot":[84],"be":[85,175],"fully":[86],"evaluated.":[87],"metagenomics":[89,184],"management":[91],"system":[92],"for":[93,178],"hydrocarbon":[94],"resources":[95],"(MetaHCRs)":[96],"enables":[97,153],"capturing":[99],"marker":[101],"gene":[102],"whole":[104],"metagenome":[105],"over":[111],"300":[112],"contextual":[113],"attributes":[114],"samples,":[117],"organisms,":[118],"geological":[121],"properties,":[122],"others.":[124],"Moreover,":[125],"MetaHCR":[126,160],"implements":[127],"Minimum":[129],"Information":[130],"about":[131],"Sequence-hydrocarbon":[133],"resource":[134],"specification":[135],"Genomic":[138],"Standards":[139],"Consortium;":[140],"integrates":[142],"user-friendly":[144],"web":[145],"interface":[146],"relational":[148],"database":[149],"model,":[150],"generation":[155],"complex":[157],"custom":[158],"search.":[159],"has":[161],"been":[162],"tested":[163],"36":[165],"studies,":[169],"its":[171],"modular":[172],"architecture":[173],"can":[174],"easily":[176],"customized":[177],"other":[179],"types":[180],"studies.":[185]},"counts_by_year":[{"year":2026,"cited_by_count":1},{"year":2021,"cited_by_count":1}],"updated_date":"2026-07-26T07:53:14.480251","created_date":"2025-10-10T00:00:00"}
