{"id":"https://openalex.org/W2800847400","doi":"https://doi.org/10.1093/database/bay042","title":"PVCbase: an integrated web resource for the PVC bacterial proteomes","display_name":"PVCbase: an integrated web resource for the PVC bacterial proteomes","publication_year":2018,"publication_date":"2018-01-01","ids":{"openalex":"https://openalex.org/W2800847400","doi":"https://doi.org/10.1093/database/bay042","mag":"2800847400","pmid":"https://pubmed.ncbi.nlm.nih.gov/29718141"},"language":"en","primary_location":{"id":"doi:10.1093/database/bay042","is_oa":true,"landing_page_url":"https://doi.org/10.1093/database/bay042","pdf_url":"https://academic.oup.com/database/article-pdf/doi/10.1093/database/bay042/27438412/bay042.pdf","source":{"id":"https://openalex.org/S4210201630","display_name":"Database","issn_l":"1758-0463","issn":["1758-0463"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311647","host_organization_name":"University of Oxford","host_organization_lineage":["https://openalex.org/P4310311647"],"host_organization_lineage_names":["University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Database","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://academic.oup.com/database/article-pdf/doi/10.1093/database/bay042/27438412/bay042.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5038645988","display_name":"Nicola Bordin","orcid":"https://orcid.org/0000-0002-6568-9035"},"institutions":[{"id":"https://openalex.org/I4210111405","display_name":"Centro Andaluz de Biolog\u00eda del Desarrollo","ror":"https://ror.org/01v5e3436","country_code":"ES","type":"facility","lineage":["https://openalex.org/I134820265","https://openalex.org/I4210111405","https://openalex.org/I918821925","https://openalex.org/I95013407"]},{"id":"https://openalex.org/I95013407","display_name":"Universidad Pablo de Olavide","ror":"https://ror.org/02z749649","country_code":"ES","type":"education","lineage":["https://openalex.org/I95013407"]}],"countries":["ES"],"is_corresponding":true,"raw_author_name":"Nicola Bordin","raw_affiliation_strings":["Centro Andaluz de Biolog\u00eda del Desarrollo, CSIC, Universidad Pablo de Olavide, Carretera de Utrera, Km. 1, Seville 41013, Spain"],"raw_orcid":"https://orcid.org/0000-0002-6568-9035","affiliations":[{"raw_affiliation_string":"Centro Andaluz de Biolog\u00eda del Desarrollo, CSIC, Universidad Pablo de Olavide, Carretera de Utrera, Km. 1, Seville 41013, Spain","institution_ids":["https://openalex.org/I4210111405","https://openalex.org/I95013407"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5091552526","display_name":"Juan Carlos Gonz\u00e1lez\u2010S\u00e1nchez","orcid":"https://orcid.org/0000-0002-7493-3669"},"institutions":[{"id":"https://openalex.org/I223822909","display_name":"Heidelberg University","ror":"https://ror.org/038t36y30","country_code":"DE","type":"education","lineage":["https://openalex.org/I223822909"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Juan Carlos Gonz\u00e1lez-S\u00e1nchez","raw_affiliation_strings":["Biochemie Zentrum Heidelberg (BZH), Heidelberg University, Im Neuenheimer Feld 328, 69120 Heidelberg, Germany","CellNetworks, BioQuant, University of Heidelberg, Im Neuenheimer Feld 267, 69120 Heidelberg, Germany"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Biochemie Zentrum Heidelberg (BZH), Heidelberg University, Im Neuenheimer Feld 328, 69120 Heidelberg, Germany","institution_ids":["https://openalex.org/I223822909"]},{"raw_affiliation_string":"CellNetworks, BioQuant, University of Heidelberg, Im Neuenheimer Feld 267, 69120 Heidelberg, Germany","institution_ids":["https://openalex.org/I223822909"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5040059021","display_name":"Damien P. Devos","orcid":"https://orcid.org/0000-0002-9453-4753"},"institutions":[{"id":"https://openalex.org/I4210111405","display_name":"Centro Andaluz de Biolog\u00eda del Desarrollo","ror":"https://ror.org/01v5e3436","country_code":"ES","type":"facility","lineage":["https://openalex.org/I134820265","https://openalex.org/I4210111405","https://openalex.org/I918821925","https://openalex.org/I95013407"]},{"id":"https://openalex.org/I95013407","display_name":"Universidad Pablo de Olavide","ror":"https://ror.org/02z749649","country_code":"ES","type":"education","lineage":["https://openalex.org/I95013407"]}],"countries":["ES"],"is_corresponding":true,"raw_author_name":"Damien P Devos","raw_affiliation_strings":["Centro Andaluz de Biolog\u00eda del Desarrollo, CSIC, Universidad Pablo de Olavide, Carretera de Utrera, Km. 1, Seville 41013, Spain"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Centro Andaluz de Biolog\u00eda del Desarrollo, CSIC, Universidad Pablo de Olavide, Carretera de Utrera, Km. 1, Seville 41013, Spain","institution_ids":["https://openalex.org/I4210111405","https://openalex.org/I95013407"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":3,"corresponding_author_ids":["https://openalex.org/A5038645988","https://openalex.org/A5040059021"],"corresponding_institution_ids":["https://openalex.org/I4210111405","https://openalex.org/I95013407"],"apc_list":{"value":2729,"currency":"USD","value_usd":2729},"apc_paid":{"value":2729,"currency":"USD","value_usd":2729},"fwci":0.9616,"has_fulltext":true,"cited_by_count":15,"citation_normalized_percentile":{"value":0.74144779,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":98},"biblio":{"volume":"2018","issue":null,"first_page":null,"last_page":null},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10066","display_name":"Gut microbiota and health","score":0.991599977016449,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10066","display_name":"Gut microbiota and health","score":0.991599977016449,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9884999990463257,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10252","display_name":"Microbial Natural Products and Biosynthesis","score":0.9782000184059143,"subfield":{"id":"https://openalex.org/subfields/2736","display_name":"Pharmacology"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7150720357894897},{"id":"https://openalex.org/keywords/annotation","display_name":"Annotation","score":0.5819199085235596},{"id":"https://openalex.org/keywords/resource","display_name":"Resource (disambiguation)","score":0.5700207352638245},{"id":"https://openalex.org/keywords/world-wide-web","display_name":"World Wide Web","score":0.5343422293663025},{"id":"https://openalex.org/keywords/web-resource","display_name":"Web resource","score":0.5308799743652344},{"id":"https://openalex.org/keywords/verrucomicrobia","display_name":"Verrucomicrobia","score":0.524577796459198},{"id":"https://openalex.org/keywords/in-silico","display_name":"In silico","score":0.5010359287261963},{"id":"https://openalex.org/keywords/proteome","display_name":"Proteome","score":0.4797981083393097},{"id":"https://openalex.org/keywords/web-browser","display_name":"Web browser","score":0.43511447310447693},{"id":"https://openalex.org/keywords/web-server","display_name":"Web server","score":0.43027007579803467},{"id":"https://openalex.org/keywords/web-service","display_name":"Web service","score":0.4254592955112457},{"id":"https://openalex.org/keywords/database","display_name":"Database","score":0.3377472758293152},{"id":"https://openalex.org/keywords/bioinformatics","display_name":"Bioinformatics","score":0.23695066571235657},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.2101987898349762},{"id":"https://openalex.org/keywords/the-internet","display_name":"The Internet","score":0.18269535899162292},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.1294565498828888},{"id":"https://openalex.org/keywords/16s-ribosomal-rna","display_name":"16S ribosomal RNA","score":0.0749630331993103}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7150720357894897},{"id":"https://openalex.org/C2776321320","wikidata":"https://www.wikidata.org/wiki/Q857525","display_name":"Annotation","level":2,"score":0.5819199085235596},{"id":"https://openalex.org/C206345919","wikidata":"https://www.wikidata.org/wiki/Q20380951","display_name":"Resource (disambiguation)","level":2,"score":0.5700207352638245},{"id":"https://openalex.org/C136764020","wikidata":"https://www.wikidata.org/wiki/Q466","display_name":"World Wide Web","level":1,"score":0.5343422293663025},{"id":"https://openalex.org/C65603577","wikidata":"https://www.wikidata.org/wiki/Q3427877","display_name":"Web resource","level":2,"score":0.5308799743652344},{"id":"https://openalex.org/C2777907754","wikidata":"https://www.wikidata.org/wiki/Q18667425","display_name":"Verrucomicrobia","level":5,"score":0.524577796459198},{"id":"https://openalex.org/C2775905019","wikidata":"https://www.wikidata.org/wiki/Q192572","display_name":"In silico","level":3,"score":0.5010359287261963},{"id":"https://openalex.org/C104397665","wikidata":"https://www.wikidata.org/wiki/Q860947","display_name":"Proteome","level":2,"score":0.4797981083393097},{"id":"https://openalex.org/C2983909278","wikidata":"https://www.wikidata.org/wiki/Q6368","display_name":"Web browser","level":3,"score":0.43511447310447693},{"id":"https://openalex.org/C11392498","wikidata":"https://www.wikidata.org/wiki/Q11288","display_name":"Web server","level":3,"score":0.43027007579803467},{"id":"https://openalex.org/C35578498","wikidata":"https://www.wikidata.org/wiki/Q193424","display_name":"Web service","level":2,"score":0.4254592955112457},{"id":"https://openalex.org/C77088390","wikidata":"https://www.wikidata.org/wiki/Q8513","display_name":"Database","level":1,"score":0.3377472758293152},{"id":"https://openalex.org/C60644358","wikidata":"https://www.wikidata.org/wiki/Q128570","display_name":"Bioinformatics","level":1,"score":0.23695066571235657},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.2101987898349762},{"id":"https://openalex.org/C110875604","wikidata":"https://www.wikidata.org/wiki/Q75","display_name":"The Internet","level":2,"score":0.18269535899162292},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.1294565498828888},{"id":"https://openalex.org/C42062724","wikidata":"https://www.wikidata.org/wiki/Q1209205","display_name":"16S ribosomal RNA","level":3,"score":0.0749630331993103},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.0},{"id":"https://openalex.org/C523546767","wikidata":"https://www.wikidata.org/wiki/Q10876","display_name":"Bacteria","level":2,"score":0.0},{"id":"https://openalex.org/C31258907","wikidata":"https://www.wikidata.org/wiki/Q1301371","display_name":"Computer network","level":1,"score":0.0},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.0},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.0},{"id":"https://openalex.org/C2778169975","wikidata":"https://www.wikidata.org/wiki/Q130914","display_name":"Actinobacteria","level":4,"score":0.0}],"mesh":[{"descriptor_ui":"D001426","descriptor_name":"Bacterial Proteins","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D001426","descriptor_name":"Bacterial Proteins","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D001426","descriptor_name":"Bacterial Proteins","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D001426","descriptor_name":"Bacterial Proteins","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D001426","descriptor_name":"Bacterial Proteins","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D001426","descriptor_name":"Bacterial Proteins","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D001426","descriptor_name":"Bacterial Proteins","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D001426","descriptor_name":"Bacterial Proteins","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D002693","descriptor_name":"Chlamydiaceae","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D002693","descriptor_name":"Chlamydiaceae","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D002693","descriptor_name":"Chlamydiaceae","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D002693","descriptor_name":"Chlamydiaceae","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D002693","descriptor_name":"Chlamydiaceae","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D002693","descriptor_name":"Chlamydiaceae","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D002693","descriptor_name":"Chlamydiaceae","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D002693","descriptor_name":"Chlamydiaceae","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D020543","descriptor_name":"Proteome","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D020543","descriptor_name":"Proteome","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D020543","descriptor_name":"Proteome","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D020543","descriptor_name":"Proteome","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D020543","descriptor_name":"Proteome","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D020543","descriptor_name":"Proteome","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D020543","descriptor_name":"Proteome","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D020543","descriptor_name":"Proteome","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D030562","descriptor_name":"Databases, Protein","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030562","descriptor_name":"Databases, Protein","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030562","descriptor_name":"Databases, Protein","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030562","descriptor_name":"Databases, Protein","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D061327","descriptor_name":"Verrucomicrobia","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D061327","descriptor_name":"Verrucomicrobia","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D061327","descriptor_name":"Verrucomicrobia","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D061327","descriptor_name":"Verrucomicrobia","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D061327","descriptor_name":"Verrucomicrobia","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D061327","descriptor_name":"Verrucomicrobia","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D061327","descriptor_name":"Verrucomicrobia","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D061327","descriptor_name":"Verrucomicrobia","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D061328","descriptor_name":"Planctomycetales","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D061328","descriptor_name":"Planctomycetales","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D061328","descriptor_name":"Planctomycetales","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D061328","descriptor_name":"Planctomycetales","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D061328","descriptor_name":"Planctomycetales","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D061328","descriptor_name":"Planctomycetales","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D061328","descriptor_name":"Planctomycetales","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D061328","descriptor_name":"Planctomycetales","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D064878","descriptor_name":"Web Browser","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D064878","descriptor_name":"Web Browser","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D064878","descriptor_name":"Web Browser","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D064878","descriptor_name":"Web Browser","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":7,"locations":[{"id":"doi:10.1093/database/bay042","is_oa":true,"landing_page_url":"https://doi.org/10.1093/database/bay042","pdf_url":"https://academic.oup.com/database/article-pdf/doi/10.1093/database/bay042/27438412/bay042.pdf","source":{"id":"https://openalex.org/S4210201630","display_name":"Database","issn_l":"1758-0463","issn":["1758-0463"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311647","host_organization_name":"University of Oxford","host_organization_lineage":["https://openalex.org/P4310311647"],"host_organization_lineage_names":["University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Database","raw_type":"journal-article"},{"id":"pmid:29718141","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/29718141","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Database : the journal of biological databases and curation","raw_type":"Journal Article"},{"id":"pmh:oai:europepmc.org:4849275","is_oa":true,"landing_page_url":"http://europepmc.org/pmc/articles/PMC5915940","pdf_url":null,"source":{"id":"https://openalex.org/S4306400806","display_name":"Europe PMC (PubMed Central)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1303153112","host_organization_name":"European Bioinformatics Institute","host_organization_lineage":["https://openalex.org/I1303153112"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"Text"},{"id":"pmh:oai:pubmedcentral.nih.gov:5915940","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/5915940","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Database (Oxford)","raw_type":"Text"},{"id":"pmh:oai:digital.csic.es:10261/242450","is_oa":true,"landing_page_url":"http://hdl.handle.net/10261/242450","pdf_url":null,"source":{"id":"https://openalex.org/S4306400616","display_name":"DIGITAL.CSIC (Spanish National Research Council (CSIC))","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I134820265","host_organization_name":"Consejo Superior de Investigaciones Cient\u00edficas","host_organization_lineage":["https://openalex.org/I134820265"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"http://purl.org/coar/resource_type/c_6501"},{"id":"pmh:oai:eprints.ucl.ac.uk.OAI2:10068566","is_oa":false,"landing_page_url":"https://discovery.ucl.ac.uk/id/eprint/10068566/","pdf_url":null,"source":{"id":"https://openalex.org/S4306400024","display_name":"UCL Discovery (University College London)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I45129253","host_organization_name":"University College London","host_organization_lineage":["https://openalex.org/I45129253"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Database , 2018 , Article bay042. (2018)","raw_type":"Article"},{"id":"pmh:oai:www.research.unipd.it:11577/3597620","is_oa":true,"landing_page_url":"https://hdl.handle.net/11577/3597620","pdf_url":null,"source":{"id":"https://openalex.org/S4306402547","display_name":"Padua Research Archive (University of Padova)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I138689650","host_organization_name":"University of Padua","host_organization_lineage":["https://openalex.org/I138689650"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"info:eu-repo/semantics/article"}],"best_oa_location":{"id":"doi:10.1093/database/bay042","is_oa":true,"landing_page_url":"https://doi.org/10.1093/database/bay042","pdf_url":"https://academic.oup.com/database/article-pdf/doi/10.1093/database/bay042/27438412/bay042.pdf","source":{"id":"https://openalex.org/S4210201630","display_name":"Database","issn_l":"1758-0463","issn":["1758-0463"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311647","host_organization_name":"University of Oxford","host_organization_lineage":["https://openalex.org/P4310311647"],"host_organization_lineage_names":["University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Database","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G3999237788","display_name":null,"funder_award_id":"BFU2016-78326-P","funder_id":"https://openalex.org/F4320321837","funder_display_name":"Ministerio de Econom\u00eda y Competitividad"},{"id":"https://openalex.org/G6484350113","display_name":null,"funder_award_id":"BFU2013-40866-P","funder_id":"https://openalex.org/F4320321837","funder_display_name":"Ministerio de Econom\u00eda y Competitividad"}],"funders":[{"id":"https://openalex.org/F4320321837","display_name":"Ministerio de Econom\u00eda y Competitividad","ror":"https://ror.org/034900433"}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2800847400.pdf","grobid_xml":"https://content.openalex.org/works/W2800847400.grobid-xml"},"referenced_works_count":43,"referenced_works":["https://openalex.org/W767528777","https://openalex.org/W1034366565","https://openalex.org/W1861493427","https://openalex.org/W1975448988","https://openalex.org/W1994196120","https://openalex.org/W2010133923","https://openalex.org/W2013474582","https://openalex.org/W2014705404","https://openalex.org/W2018503447","https://openalex.org/W2023848437","https://openalex.org/W2034299708","https://openalex.org/W2041504755","https://openalex.org/W2047544230","https://openalex.org/W2051210555","https://openalex.org/W2059324308","https://openalex.org/W2060592742","https://openalex.org/W2061134340","https://openalex.org/W2061657565","https://openalex.org/W2083420122","https://openalex.org/W2089222249","https://openalex.org/W2094201044","https://openalex.org/W2101291993","https://openalex.org/W2103017472","https://openalex.org/W2104682068","https://openalex.org/W2116423958","https://openalex.org/W2124321152","https://openalex.org/W2142529984","https://openalex.org/W2145268834","https://openalex.org/W2150425414","https://openalex.org/W2152770371","https://openalex.org/W2156407548","https://openalex.org/W2158714788","https://openalex.org/W2159482845","https://openalex.org/W2161529001","https://openalex.org/W2170463736","https://openalex.org/W2256152883","https://openalex.org/W2265493775","https://openalex.org/W2560672877","https://openalex.org/W2607004112","https://openalex.org/W2766342395","https://openalex.org/W2967528950","https://openalex.org/W4294216483","https://openalex.org/W6693093711"],"related_works":["https://openalex.org/W2564060708","https://openalex.org/W2043847867","https://openalex.org/W1999380467","https://openalex.org/W4243596707","https://openalex.org/W2034009024","https://openalex.org/W2108187864","https://openalex.org/W2084305201","https://openalex.org/W2033854691","https://openalex.org/W2046139284","https://openalex.org/W2115315232"],"abstract_inverted_index":{"Interest":[0],"in":[1,24,27,46,49],"the":[2,10,35,87,94,121],"Planctomycetes-Verrucomicrobia-Chlamydiae":[3],"(PVC)":[4],"bacterial":[5],"superphylum":[6],"is":[7,136],"growing":[8],"within":[9],"microbiology":[11],"community.":[12],"These":[13],"organisms":[14],"do":[15],"not":[16],"have":[17,109],"a":[18,40,72,78,90,110],"specialized":[19,41],"web":[20,42],"resource":[21,43],"that":[22,44,83],"gathers":[23,45],"silico":[25,47],"predictions":[26,48],"an":[28,50],"integrated":[29,51],"fashion.":[30,52],"Hence,":[31],"we":[32,118],"are":[33],"providing":[34],"PVC":[36,69],"community":[37],"with":[38],"PVCbase,":[39],"PVCbase":[53,135],"integrates":[54],"protein":[55,73,115],"function":[56],"annotations":[57],"obtained":[58],"through":[59],"sequence":[60],"analysis":[61],"and":[62,77],"tertiary":[63],"structure":[64],"prediction":[65],"for":[66],"39":[67],"representative":[68],"proteomes":[70],"(PVCdb),":[71],"feature":[74],"visualizer":[75],"(Foundation)":[76],"custom":[79],"BLAST":[80],"webserver":[81],"(PVCBlast)":[82],"allows":[84],"to":[85,108,128],"retrieve":[86],"annotation":[88],"of":[89,114,123],"hit":[91],"directly":[92],"from":[93,99,132],"DataTables.":[95],"We":[96],"display":[97],"results":[98],"various":[100],"predictors,":[101],"encompassing":[102],"most":[103],"functional":[104],"aspects,":[105],"allowing":[106],"users":[107],"more":[111],"comprehensive":[112],"overview":[113],"identities.":[116],"Additionally,":[117],"illustrate":[119],"how":[120],"application":[122],"PVCdb":[124],"can":[125],"be":[126],"used":[127],"address":[129],"biological":[130],"questions":[131],"raw":[133],"data.":[134],"freely":[137],"accessible":[138],"at:":[139],"www.pvcbacteria.org/pvcbase.":[140]},"counts_by_year":[{"year":2025,"cited_by_count":1},{"year":2023,"cited_by_count":2},{"year":2022,"cited_by_count":1},{"year":2021,"cited_by_count":2},{"year":2020,"cited_by_count":5},{"year":2019,"cited_by_count":3},{"year":2018,"cited_by_count":1}],"updated_date":"2026-08-27T14:10:00.468798","created_date":"2025-10-10T00:00:00"}
