{"id":"https://openalex.org/W2785356965","doi":"https://doi.org/10.1093/database/bax082","title":"Biomarker identification of hepatocellular carcinoma using a methodical literature mining strategy","display_name":"Biomarker identification of hepatocellular carcinoma using a methodical literature mining strategy","publication_year":2017,"publication_date":"2017-01-01","ids":{"openalex":"https://openalex.org/W2785356965","doi":"https://doi.org/10.1093/database/bax082","mag":"2785356965","pmid":"https://pubmed.ncbi.nlm.nih.gov/31725857"},"language":"en","primary_location":{"id":"doi:10.1093/database/bax082","is_oa":true,"landing_page_url":"https://doi.org/10.1093/database/bax082","pdf_url":"https://academic.oup.com/database/article-pdf/doi/10.1093/database/bax082/22304576/bax082.pdf","source":{"id":"https://openalex.org/S4210201630","display_name":"Database","issn_l":"1758-0463","issn":["1758-0463"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311647","host_organization_name":"University of Oxford","host_organization_lineage":["https://openalex.org/P4310311647"],"host_organization_lineage_names":["University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Database","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://academic.oup.com/database/article-pdf/doi/10.1093/database/bax082/22304576/bax082.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5083180396","display_name":"Nai\u2010Wen Chang","orcid":"https://orcid.org/0000-0002-6842-9693"},"institutions":[{"id":"https://openalex.org/I16733864","display_name":"National Taiwan University","ror":"https://ror.org/05bqach95","country_code":"TW","type":"education","lineage":["https://openalex.org/I16733864"]},{"id":"https://openalex.org/I4210098366","display_name":"Institute of Information Science, Academia Sinica","ror":"https://ror.org/00z83z196","country_code":"TW","type":"facility","lineage":["https://openalex.org/I4210098366","https://openalex.org/I84653119"]}],"countries":["TW"],"is_corresponding":true,"raw_author_name":"Nai-Wen Chang","raw_affiliation_strings":["Graduate Institute of Biomedical Electronics and Bioinformatics, National Taiwan University, Taipei, Taiwan","Institute of Information Science, Academia Sinica, Taipei, Taiwan"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Graduate Institute of Biomedical Electronics and Bioinformatics, National Taiwan University, Taipei, Taiwan","institution_ids":["https://openalex.org/I16733864"]},{"raw_affiliation_string":"Institute of Information Science, Academia Sinica, Taipei, Taiwan","institution_ids":["https://openalex.org/I4210098366"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5037362113","display_name":"Hong-Jie Dai","orcid":"https://orcid.org/0000-0002-1516-7255"},"institutions":[{"id":"https://openalex.org/I178613991","display_name":"National Taitung University","ror":"https://ror.org/05j9d8v51","country_code":"TW","type":"education","lineage":["https://openalex.org/I178613991"]}],"countries":["TW"],"is_corresponding":true,"raw_author_name":"Hong-Jie Dai","raw_affiliation_strings":["Department of Computer Science and Information Engineering, National Taitung University, Taitung, Taiwan","Interdisciplinary Program of Green and Information Technology, National Taitung University, Taitung, Taiwan"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Computer Science and Information Engineering, National Taitung University, Taitung, Taiwan","institution_ids":["https://openalex.org/I178613991"]},{"raw_affiliation_string":"Interdisciplinary Program of Green and Information Technology, National Taitung University, Taitung, Taiwan","institution_ids":["https://openalex.org/I178613991"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5066864218","display_name":"Yung-Yu Shih","orcid":"https://orcid.org/0009-0003-5194-8803"},"institutions":[{"id":"https://openalex.org/I4210098366","display_name":"Institute of Information Science, Academia Sinica","ror":"https://ror.org/00z83z196","country_code":"TW","type":"facility","lineage":["https://openalex.org/I4210098366","https://openalex.org/I84653119"]}],"countries":["TW"],"is_corresponding":false,"raw_author_name":"Yung-Yu Shih","raw_affiliation_strings":["Institute of Information Science, Academia Sinica, Taipei, Taiwan"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Institute of Information Science, Academia Sinica, Taipei, Taiwan","institution_ids":["https://openalex.org/I4210098366"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5020796354","display_name":"Chi-Yang Wu","orcid":null},"institutions":[{"id":"https://openalex.org/I4210098366","display_name":"Institute of Information Science, Academia Sinica","ror":"https://ror.org/00z83z196","country_code":"TW","type":"facility","lineage":["https://openalex.org/I4210098366","https://openalex.org/I84653119"]}],"countries":["TW"],"is_corresponding":false,"raw_author_name":"Chi-Yang Wu","raw_affiliation_strings":["Institute of Information Science, Academia Sinica, Taipei, Taiwan"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Institute of Information Science, Academia Sinica, Taipei, Taiwan","institution_ids":["https://openalex.org/I4210098366"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5109945340","display_name":"Mira Anne C. dela Rosa","orcid":null},"institutions":[{"id":"https://openalex.org/I4210157360","display_name":"Institute of Chemistry, Academia Sinica","ror":"https://ror.org/04xjjma71","country_code":"TW","type":"facility","lineage":["https://openalex.org/I4210157360","https://openalex.org/I84653119"]}],"countries":["TW"],"is_corresponding":false,"raw_author_name":"Mira Anne C Dela Rosa","raw_affiliation_strings":["Institute of Chemistry, Academia Sinica, Taipei, Taiwan"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Institute of Chemistry, Academia Sinica, Taipei, Taiwan","institution_ids":["https://openalex.org/I4210157360"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5062946539","display_name":"Rofeamor P. Obena","orcid":"https://orcid.org/0000-0003-3080-8222"},"institutions":[{"id":"https://openalex.org/I4210157360","display_name":"Institute of Chemistry, Academia Sinica","ror":"https://ror.org/04xjjma71","country_code":"TW","type":"facility","lineage":["https://openalex.org/I4210157360","https://openalex.org/I84653119"]}],"countries":["TW"],"is_corresponding":false,"raw_author_name":"Rofeamor P Obena","raw_affiliation_strings":["Institute of Chemistry, Academia Sinica, Taipei, Taiwan"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Institute of Chemistry, Academia Sinica, Taipei, Taiwan","institution_ids":["https://openalex.org/I4210157360"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5032536480","display_name":"Yu\u2010Ju Chen","orcid":"https://orcid.org/0000-0002-3178-6697"},"institutions":[{"id":"https://openalex.org/I4210157360","display_name":"Institute of Chemistry, Academia Sinica","ror":"https://ror.org/04xjjma71","country_code":"TW","type":"facility","lineage":["https://openalex.org/I4210157360","https://openalex.org/I84653119"]}],"countries":["TW"],"is_corresponding":false,"raw_author_name":"Yu-Ju Chen","raw_affiliation_strings":["Institute of Chemistry, Academia Sinica, Taipei, Taiwan"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Institute of Chemistry, Academia Sinica, Taipei, Taiwan","institution_ids":["https://openalex.org/I4210157360"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5119558606","display_name":"Wen\u2212Lian Hsu","orcid":"https://orcid.org/0000-0001-7061-3513"},"institutions":[{"id":"https://openalex.org/I4210098366","display_name":"Institute of Information Science, Academia Sinica","ror":"https://ror.org/00z83z196","country_code":"TW","type":"facility","lineage":["https://openalex.org/I4210098366","https://openalex.org/I84653119"]}],"countries":["TW"],"is_corresponding":true,"raw_author_name":"Wen-Lian Hsu","raw_affiliation_strings":["Institute of Information Science, Academia Sinica, Taipei, Taiwan"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Institute of Information Science, Academia Sinica, Taipei, Taiwan","institution_ids":["https://openalex.org/I4210098366"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5025555646","display_name":"Yen\u2010Jen Oyang","orcid":null},"institutions":[{"id":"https://openalex.org/I16733864","display_name":"National Taiwan University","ror":"https://ror.org/05bqach95","country_code":"TW","type":"education","lineage":["https://openalex.org/I16733864"]}],"countries":["TW"],"is_corresponding":true,"raw_author_name":"Yen-Jen Oyang","raw_affiliation_strings":["Graduate Institute of Biomedical Electronics and Bioinformatics, National Taiwan University, Taipei, Taiwan"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Graduate Institute of Biomedical Electronics and Bioinformatics, National Taiwan University, Taipei, Taiwan","institution_ids":["https://openalex.org/I16733864"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":4,"corresponding_author_ids":["https://openalex.org/A5025555646","https://openalex.org/A5037362113","https://openalex.org/A5083180396","https://openalex.org/A5119558606"],"corresponding_institution_ids":["https://openalex.org/I16733864","https://openalex.org/I178613991","https://openalex.org/I4210098366"],"apc_list":{"value":1415,"currency":"GBP","value_usd":1735},"apc_paid":{"value":1415,"currency":"GBP","value_usd":1735},"fwci":0.4372,"has_fulltext":true,"cited_by_count":9,"citation_normalized_percentile":{"value":0.63979843,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":97},"biblio":{"volume":"2017","issue":null,"first_page":null,"last_page":null},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9976000189781189,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9976000189781189,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9926999807357788,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T13937","display_name":"Genetics, Bioinformatics, and Biomedical Research","score":0.9646000266075134,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7160472273826599},{"id":"https://openalex.org/keywords/identification","display_name":"Identification (biology)","score":0.6196236610412598},{"id":"https://openalex.org/keywords/pipeline","display_name":"Pipeline (software)","score":0.560535728931427},{"id":"https://openalex.org/keywords/biomarker-discovery","display_name":"Biomarker discovery","score":0.4815447926521301},{"id":"https://openalex.org/keywords/biomarker","display_name":"Biomarker","score":0.46802693605422974},{"id":"https://openalex.org/keywords/information-retrieval","display_name":"Information retrieval","score":0.40891098976135254},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.34930163621902466},{"id":"https://openalex.org/keywords/bioinformatics","display_name":"Bioinformatics","score":0.34055909514427185},{"id":"https://openalex.org/keywords/data-science","display_name":"Data science","score":0.3382927179336548},{"id":"https://openalex.org/keywords/proteomics","display_name":"Proteomics","score":0.1070355474948883},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.10209250450134277},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.07869938015937805}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7160472273826599},{"id":"https://openalex.org/C116834253","wikidata":"https://www.wikidata.org/wiki/Q2039217","display_name":"Identification (biology)","level":2,"score":0.6196236610412598},{"id":"https://openalex.org/C43521106","wikidata":"https://www.wikidata.org/wiki/Q2165493","display_name":"Pipeline (software)","level":2,"score":0.560535728931427},{"id":"https://openalex.org/C124535831","wikidata":"https://www.wikidata.org/wiki/Q4915074","display_name":"Biomarker discovery","level":4,"score":0.4815447926521301},{"id":"https://openalex.org/C2781197716","wikidata":"https://www.wikidata.org/wiki/Q864574","display_name":"Biomarker","level":2,"score":0.46802693605422974},{"id":"https://openalex.org/C23123220","wikidata":"https://www.wikidata.org/wiki/Q816826","display_name":"Information retrieval","level":1,"score":0.40891098976135254},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.34930163621902466},{"id":"https://openalex.org/C60644358","wikidata":"https://www.wikidata.org/wiki/Q128570","display_name":"Bioinformatics","level":1,"score":0.34055909514427185},{"id":"https://openalex.org/C2522767166","wikidata":"https://www.wikidata.org/wiki/Q2374463","display_name":"Data science","level":1,"score":0.3382927179336548},{"id":"https://openalex.org/C46111723","wikidata":"https://www.wikidata.org/wiki/Q471857","display_name":"Proteomics","level":3,"score":0.1070355474948883},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.10209250450134277},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.07869938015937805},{"id":"https://openalex.org/C59822182","wikidata":"https://www.wikidata.org/wiki/Q441","display_name":"Botany","level":1,"score":0.0},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.0},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.0}],"mesh":[],"locations_count":3,"locations":[{"id":"doi:10.1093/database/bax082","is_oa":true,"landing_page_url":"https://doi.org/10.1093/database/bax082","pdf_url":"https://academic.oup.com/database/article-pdf/doi/10.1093/database/bax082/22304576/bax082.pdf","source":{"id":"https://openalex.org/S4210201630","display_name":"Database","issn_l":"1758-0463","issn":["1758-0463"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311647","host_organization_name":"University of Oxford","host_organization_lineage":["https://openalex.org/P4310311647"],"host_organization_lineage_names":["University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Database","raw_type":"journal-article"},{"id":"pmid:31725857","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/31725857","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Database : the journal of biological databases and curation","raw_type":null},{"id":"pmh:oai:pubmedcentral.nih.gov:7243925","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/7243925","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Database (Oxford)","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1093/database/bax082","is_oa":true,"landing_page_url":"https://doi.org/10.1093/database/bax082","pdf_url":"https://academic.oup.com/database/article-pdf/doi/10.1093/database/bax082/22304576/bax082.pdf","source":{"id":"https://openalex.org/S4210201630","display_name":"Database","issn_l":"1758-0463","issn":["1758-0463"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311647","host_organization_name":"University of Oxford","host_organization_lineage":["https://openalex.org/P4310311647"],"host_organization_lineage_names":["University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Database","raw_type":"journal-article"},"sustainable_development_goals":[{"id":"https://metadata.un.org/sdg/3","score":0.5699999928474426,"display_name":"Good health and well-being"}],"awards":[{"id":"https://openalex.org/G2584108489","display_name":null,"funder_award_id":"MOST106-","funder_id":"https://openalex.org/F4320322795","funder_display_name":"Ministry of Science and Technology, Taiwan"},{"id":"https://openalex.org/G7433390515","display_name":null,"funder_award_id":"MOST105-","funder_id":"https://openalex.org/F4320322795","funder_display_name":"Ministry of Science and Technology, Taiwan"},{"id":"https://openalex.org/G7897398179","display_name":null,"funder_award_id":"MOST105","funder_id":"https://openalex.org/F4320322795","funder_display_name":"Ministry of Science and Technology, Taiwan"},{"id":"https://openalex.org/G951433114","display_name":null,"funder_award_id":"007-MY3","funder_id":"https://openalex.org/F4320322795","funder_display_name":"Ministry of Science and Technology, Taiwan"}],"funders":[{"id":"https://openalex.org/F4320322795","display_name":"Ministry of Science and Technology, Taiwan","ror":"https://ror.org/02kv4zf79"}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2785356965.pdf","grobid_xml":"https://content.openalex.org/works/W2785356965.grobid-xml"},"referenced_works_count":88,"referenced_works":["https://openalex.org/W90362830","https://openalex.org/W91108901","https://openalex.org/W1220301675","https://openalex.org/W1509926796","https://openalex.org/W1512072225","https://openalex.org/W1524224136","https://openalex.org/W1524991052","https://openalex.org/W1600604896","https://openalex.org/W1607026529","https://openalex.org/W1612597062","https://openalex.org/W1624509705","https://openalex.org/W1637237455","https://openalex.org/W1834106404","https://openalex.org/W1889335134","https://openalex.org/W1964670939","https://openalex.org/W1980183403","https://openalex.org/W1985532482","https://openalex.org/W1993177012","https://openalex.org/W1996109529","https://openalex.org/W1998222399","https://openalex.org/W2007383996","https://openalex.org/W2008676682","https://openalex.org/W2010115073","https://openalex.org/W2020301095","https://openalex.org/W2032069669","https://openalex.org/W2035794058","https://openalex.org/W2045870710","https://openalex.org/W2046831513","https://openalex.org/W2065615506","https://openalex.org/W2070412833","https://openalex.org/W2074194840","https://openalex.org/W2081589784","https://openalex.org/W2098740402","https://openalex.org/W2102345429","https://openalex.org/W2110256992","https://openalex.org/W2112227057","https://openalex.org/W2115550587","https://openalex.org/W2117024463","https://openalex.org/W2118151336","https://openalex.org/W2126415088","https://openalex.org/W2129769331","https://openalex.org/W2132288458","https://openalex.org/W2133146717","https://openalex.org/W2134711219","https://openalex.org/W2135113383","https://openalex.org/W2140283616","https://openalex.org/W2141869602","https://openalex.org/W2142846876","https://openalex.org/W2146980885","https://openalex.org/W2147418473","https://openalex.org/W2148499186","https://openalex.org/W2150577353","https://openalex.org/W2152982702","https://openalex.org/W2153283984","https://openalex.org/W2156216776","https://openalex.org/W2156224520","https://openalex.org/W2158063174","https://openalex.org/W2159482845","https://openalex.org/W2159937720","https://openalex.org/W2160717412","https://openalex.org/W2161604082","https://openalex.org/W2164631148","https://openalex.org/W2167902628","https://openalex.org/W2170752702","https://openalex.org/W2171697766","https://openalex.org/W2322107446","https://openalex.org/W2328441816","https://openalex.org/W2341128841","https://openalex.org/W2344539657","https://openalex.org/W2489896305","https://openalex.org/W2554634780","https://openalex.org/W2559034752","https://openalex.org/W2559588208","https://openalex.org/W2564671332","https://openalex.org/W2566288566","https://openalex.org/W2594373254","https://openalex.org/W2739999456","https://openalex.org/W2918064359","https://openalex.org/W2963082289","https://openalex.org/W2977393556","https://openalex.org/W3021982608","https://openalex.org/W3137135981","https://openalex.org/W4245881395","https://openalex.org/W4294216483","https://openalex.org/W6603694148","https://openalex.org/W6631252893","https://openalex.org/W6635873800","https://openalex.org/W6682437006"],"related_works":["https://openalex.org/W112583468","https://openalex.org/W96119380","https://openalex.org/W3023706879","https://openalex.org/W4298030740","https://openalex.org/W2108949684","https://openalex.org/W4246773350","https://openalex.org/W1965976436","https://openalex.org/W2012655824","https://openalex.org/W3177170977","https://openalex.org/W2326771431"],"abstract_inverted_index":{"Hepatocellular":[0],"carcinoma":[1],"(HCC),":[2],"one":[3],"of":[4,9,17,27,31,36,54,83,89,95,152,188],"the":[5,20,28,37,51,86,109,186,193,208],"most":[6],"common":[7],"causes":[8],"cancer-related":[10],"deaths,":[11],"carries":[12],"a":[13,125,171,201],"5-year":[14],"survival":[15],"rate":[16],"18%,":[18],"underscoring":[19],"need":[21,62],"for":[22,45,57,97,134,204],"robust":[23],"biomarkers.":[24],"In":[25],"spite":[26],"increased":[29],"availability":[30],"HCC":[32],"related":[33],"literatures,":[34],"many":[35],"promising":[38],"biomarkers":[39,56,98,133,169,177,218],"reported":[40],"have":[41],"not":[42],"been":[43],"validated":[44],"clinical":[46,59],"use.":[47],"To":[48],"narrow":[49],"down":[50],"wide":[52],"range":[53],"possible":[55],"further":[58],"validation,":[60],"bioinformaticians":[61],"to":[63,80,130,143,225],"sort":[64],"them":[65],"out":[66],"using":[67,170],"information":[68,82],"provided":[69],"in":[70],"published":[71],"works.":[72],"Biomedical":[73],"text":[74,126],"mining":[75],"is":[76],"an":[77],"automated":[78],"way":[79],"obtain":[81],"interest":[84],"within":[85],"massive":[87],"collection":[88],"biomedical":[90],"knowledge,":[91],"thus":[92],"enabling":[93],"extraction":[94],"data":[96],"associated":[99],"with":[100],"certain":[101],"diseases.":[102,121],"This":[103],"method":[104],"can":[105],"significantly":[106],"reduce":[107],"both":[108],"time":[110],"and":[111,148,158,190,192,197],"effort":[112],"spent":[113],"on":[114,181,207],"studying":[115],"important":[116],"maladies":[117],"such":[118,184],"as":[119,167,185],"liver":[120,135],"Herein,":[122],"we":[123,211],"report":[124],"mining-aided":[127],"curation":[128,138],"pipeline":[129,139],"identify":[131],"potential":[132],"cancer.":[136],"The":[137],"integrates":[140],"PubMed":[141,147,221],"E-Utilities":[142],"collect":[144],"abstracts":[145],"from":[146,162,220,223],"recognize":[149],"several":[150,182],"types":[151],"named":[153],"entities":[154],"by":[155],"machine":[156],"learning-based":[157],"pattern-based":[159],"methods.":[160],"Genes/proteins":[161],"evidential":[163],"sentences":[164],"were":[165,178],"classified":[166],"candidate":[168,217],"convolutional":[172],"neural":[173],"network.":[174],"Lastly,":[175],"extracted":[176,219],"ranked":[179],"depending":[180],"criteria,":[183],"frequency":[187],"keywords":[189],"articles":[191],"journal":[194],"impact":[195],"factor,":[196],"then":[198],"integrated":[199],"into":[200],"meaningful":[202],"list":[203],"bioinformaticians.":[205],"Based":[206],"developed":[209],"pipeline,":[210],"constructed":[212],"MarkerHub,":[213],"which":[214],"contains":[215],"2128":[216],"publications":[222],"2008":[224],"2017.":[226],"Database":[227],"URL:":[228],"http://markerhub.iis.sinica.edu.tw.":[229]},"counts_by_year":[{"year":2024,"cited_by_count":1},{"year":2023,"cited_by_count":1},{"year":2021,"cited_by_count":2},{"year":2020,"cited_by_count":3},{"year":2019,"cited_by_count":1},{"year":2016,"cited_by_count":1}],"updated_date":"2026-05-21T06:26:12.895304","created_date":"2025-10-10T00:00:00"}
