{"id":"https://openalex.org/W2601787998","doi":"https://doi.org/10.1093/database/bax039","title":"GenomeHubs: simple containerized setup of a custom Ensembl database and web server for any species","display_name":"GenomeHubs: simple containerized setup of a custom Ensembl database and web server for any species","publication_year":2017,"publication_date":"2017-01-01","ids":{"openalex":"https://openalex.org/W2601787998","doi":"https://doi.org/10.1093/database/bax039","mag":"2601787998","pmid":"https://pubmed.ncbi.nlm.nih.gov/28605774"},"language":"en","primary_location":{"id":"doi:10.1093/database/bax039","is_oa":true,"landing_page_url":"https://doi.org/10.1093/database/bax039","pdf_url":"https://academic.oup.com/database/article-pdf/doi/10.1093/database/bax039/19234611/bax039.pdf","source":{"id":"https://openalex.org/S4210201630","display_name":"Database","issn_l":"1758-0463","issn":["1758-0463"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311647","host_organization_name":"University of Oxford","host_organization_lineage":["https://openalex.org/P4310311647"],"host_organization_lineage_names":["University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Database","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://academic.oup.com/database/article-pdf/doi/10.1093/database/bax039/19234611/bax039.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5065255983","display_name":"Richard Challis","orcid":"https://orcid.org/0000-0002-3502-1122"},"institutions":[{"id":"https://openalex.org/I98677209","display_name":"University of Edinburgh","ror":"https://ror.org/01nrxwf90","country_code":"GB","type":"education","lineage":["https://openalex.org/I98677209"]}],"countries":["GB"],"is_corresponding":true,"raw_author_name":"Richard J. Challis","raw_affiliation_strings":["Institute of Evolutionary Biology, The University of Edinburgh, Ashworth Laboratories, Charlotte Auerbach Road, Edinburgh, EH9 3FL, UK"],"affiliations":[{"raw_affiliation_string":"Institute of Evolutionary Biology, The University of Edinburgh, Ashworth Laboratories, Charlotte Auerbach Road, Edinburgh, EH9 3FL, UK","institution_ids":["https://openalex.org/I98677209"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5084853678","display_name":"Sujai Kumar","orcid":"https://orcid.org/0000-0001-5902-6641"},"institutions":[{"id":"https://openalex.org/I98677209","display_name":"University of Edinburgh","ror":"https://ror.org/01nrxwf90","country_code":"GB","type":"education","lineage":["https://openalex.org/I98677209"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Sujai Kumar","raw_affiliation_strings":["Institute of Evolutionary Biology, The University of Edinburgh, Ashworth Laboratories, Charlotte Auerbach Road, Edinburgh, EH9 3FL, UK"],"affiliations":[{"raw_affiliation_string":"Institute of Evolutionary Biology, The University of Edinburgh, Ashworth Laboratories, Charlotte Auerbach Road, Edinburgh, EH9 3FL, UK","institution_ids":["https://openalex.org/I98677209"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5009232364","display_name":"Lewis Stevens","orcid":"https://orcid.org/0000-0002-6075-8273"},"institutions":[{"id":"https://openalex.org/I98677209","display_name":"University of Edinburgh","ror":"https://ror.org/01nrxwf90","country_code":"GB","type":"education","lineage":["https://openalex.org/I98677209"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Lewis Stevens","raw_affiliation_strings":["Institute of Evolutionary Biology, The University of Edinburgh, Ashworth Laboratories, Charlotte Auerbach Road, Edinburgh, EH9 3FL, UK"],"affiliations":[{"raw_affiliation_string":"Institute of Evolutionary Biology, The University of Edinburgh, Ashworth Laboratories, Charlotte Auerbach Road, Edinburgh, EH9 3FL, UK","institution_ids":["https://openalex.org/I98677209"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5060637041","display_name":"Mark Blaxter","orcid":"https://orcid.org/0000-0003-2861-949X"},"institutions":[{"id":"https://openalex.org/I98677209","display_name":"University of Edinburgh","ror":"https://ror.org/01nrxwf90","country_code":"GB","type":"education","lineage":["https://openalex.org/I98677209"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Mark Blaxter","raw_affiliation_strings":["Institute of Evolutionary Biology, The University of Edinburgh, Ashworth Laboratories, Charlotte Auerbach Road, Edinburgh, EH9 3FL, UK"],"affiliations":[{"raw_affiliation_string":"Institute of Evolutionary Biology, The University of Edinburgh, Ashworth Laboratories, Charlotte Auerbach Road, Edinburgh, EH9 3FL, UK","institution_ids":["https://openalex.org/I98677209"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":4,"corresponding_author_ids":["https://openalex.org/A5065255983"],"corresponding_institution_ids":["https://openalex.org/I98677209"],"apc_list":{"value":1415,"currency":"GBP","value_usd":1735},"apc_paid":{"value":1415,"currency":"GBP","value_usd":1735},"fwci":1.4547,"has_fulltext":false,"cited_by_count":20,"citation_normalized_percentile":{"value":0.81449194,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":91,"max":98},"biblio":{"volume":"2017","issue":null,"first_page":null,"last_page":null},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9990000128746033,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9990000128746033,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10434","display_name":"Chromosomal and Genetic Variations","score":0.9983999729156494,"subfield":{"id":"https://openalex.org/subfields/1110","display_name":"Plant Science"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10878","display_name":"CRISPR and Genetic Engineering","score":0.995199978351593,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/ensembl","display_name":"Ensembl","score":0.9443261623382568},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6899416446685791},{"id":"https://openalex.org/keywords/database","display_name":"Database","score":0.6747249960899353},{"id":"https://openalex.org/keywords/simple","display_name":"Simple (philosophy)","score":0.5802589058876038},{"id":"https://openalex.org/keywords/world-wide-web","display_name":"World Wide Web","score":0.530224621295929},{"id":"https://openalex.org/keywords/database-query","display_name":"Database query","score":0.45360904932022095},{"id":"https://openalex.org/keywords/web-server","display_name":"Web server","score":0.4215741455554962},{"id":"https://openalex.org/keywords/operating-system","display_name":"Operating system","score":0.3546537160873413},{"id":"https://openalex.org/keywords/the-internet","display_name":"The Internet","score":0.27498751878738403},{"id":"https://openalex.org/keywords/chemistry","display_name":"Chemistry","score":0.23965713381767273}],"concepts":[{"id":"https://openalex.org/C141674004","wikidata":"https://www.wikidata.org/wiki/Q1344256","display_name":"Ensembl","level":5,"score":0.9443261623382568},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6899416446685791},{"id":"https://openalex.org/C77088390","wikidata":"https://www.wikidata.org/wiki/Q8513","display_name":"Database","level":1,"score":0.6747249960899353},{"id":"https://openalex.org/C2780586882","wikidata":"https://www.wikidata.org/wiki/Q7520643","display_name":"Simple (philosophy)","level":2,"score":0.5802589058876038},{"id":"https://openalex.org/C136764020","wikidata":"https://www.wikidata.org/wiki/Q466","display_name":"World Wide Web","level":1,"score":0.530224621295929},{"id":"https://openalex.org/C2989070954","wikidata":"https://www.wikidata.org/wiki/Q8513","display_name":"Database query","level":2,"score":0.45360904932022095},{"id":"https://openalex.org/C11392498","wikidata":"https://www.wikidata.org/wiki/Q11288","display_name":"Web server","level":3,"score":0.4215741455554962},{"id":"https://openalex.org/C111919701","wikidata":"https://www.wikidata.org/wiki/Q9135","display_name":"Operating system","level":1,"score":0.3546537160873413},{"id":"https://openalex.org/C110875604","wikidata":"https://www.wikidata.org/wiki/Q75","display_name":"The Internet","level":2,"score":0.27498751878738403},{"id":"https://openalex.org/C185592680","wikidata":"https://www.wikidata.org/wiki/Q2329","display_name":"Chemistry","level":0,"score":0.23965713381767273},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.0},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.0},{"id":"https://openalex.org/C189206191","wikidata":"https://www.wikidata.org/wiki/Q222046","display_name":"Genomics","level":4,"score":0.0},{"id":"https://openalex.org/C111472728","wikidata":"https://www.wikidata.org/wiki/Q9471","display_name":"Epistemology","level":1,"score":0.0},{"id":"https://openalex.org/C138885662","wikidata":"https://www.wikidata.org/wiki/Q5891","display_name":"Philosophy","level":0,"score":0.0},{"id":"https://openalex.org/C141231307","wikidata":"https://www.wikidata.org/wiki/Q7020","display_name":"Genome","level":3,"score":0.0}],"mesh":[{"descriptor_ui":"D000073458","descriptor_name":"Data Warehousing","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D000073458","descriptor_name":"Data Warehousing","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D000073458","descriptor_name":"Data Warehousing","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D000073458","descriptor_name":"Data Warehousing","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016678","descriptor_name":"Genome","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016678","descriptor_name":"Genome","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016678","descriptor_name":"Genome","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016678","descriptor_name":"Genome","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D017422","descriptor_name":"Sequence Analysis, DNA","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D017422","descriptor_name":"Sequence Analysis, DNA","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D017422","descriptor_name":"Sequence Analysis, DNA","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D017422","descriptor_name":"Sequence Analysis, DNA","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030561","descriptor_name":"Databases, Nucleic Acid","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030561","descriptor_name":"Databases, Nucleic Acid","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030561","descriptor_name":"Databases, Nucleic Acid","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030561","descriptor_name":"Databases, Nucleic Acid","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D064878","descriptor_name":"Web Browser","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D064878","descriptor_name":"Web Browser","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D064878","descriptor_name":"Web Browser","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D064878","descriptor_name":"Web Browser","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true}],"locations_count":5,"locations":[{"id":"doi:10.1093/database/bax039","is_oa":true,"landing_page_url":"https://doi.org/10.1093/database/bax039","pdf_url":"https://academic.oup.com/database/article-pdf/doi/10.1093/database/bax039/19234611/bax039.pdf","source":{"id":"https://openalex.org/S4210201630","display_name":"Database","issn_l":"1758-0463","issn":["1758-0463"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311647","host_organization_name":"University of Oxford","host_organization_lineage":["https://openalex.org/P4310311647"],"host_organization_lineage_names":["University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Database","raw_type":"journal-article"},{"id":"pmid:28605774","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/28605774","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Database : the journal of biological databases and curation","raw_type":null},{"id":"pmh:oai:pure.ed.ac.uk:openaire/3136a1b3-c868-4088-8a42-35a6643e4c5c","is_oa":true,"landing_page_url":"https://www.research.ed.ac.uk/en/publications/3136a1b3-c868-4088-8a42-35a6643e4c5c","pdf_url":null,"source":{"id":"https://openalex.org/S4406922455","display_name":"Edinburgh Research Explorer","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Challis, R J, Kumar, S, Stevens, L & Blaxter, M 2017, 'GenomeHubs : simple containerized setup of a custom Ensembl database and web server for any species', Database: The Journal of Biological Databases and Curation, vol. 2017. https://doi.org/10.1093/database/bax039","raw_type":"info:eu-repo/semantics/publishedVersion"},{"id":"pmh:oai:europepmc.org:4323788","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/5467552","pdf_url":null,"source":{"id":"https://openalex.org/S4306400806","display_name":"Europe PMC (PubMed Central)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1303153112","host_organization_name":"European Bioinformatics Institute","host_organization_lineage":["https://openalex.org/I1303153112"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Text"},{"id":"pmh:oai:pure.ed.ac.uk:publications/3136a1b3-c868-4088-8a42-35a6643e4c5c","is_oa":true,"landing_page_url":"https://www.research.ed.ac.uk/portal/en/publications/genomehubs(3136a1b3-c868-4088-8a42-35a6643e4c5c).html","pdf_url":null,"source":{"id":"https://openalex.org/S4406922455","display_name":"Edinburgh Research Explorer","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":""}],"best_oa_location":{"id":"doi:10.1093/database/bax039","is_oa":true,"landing_page_url":"https://doi.org/10.1093/database/bax039","pdf_url":"https://academic.oup.com/database/article-pdf/doi/10.1093/database/bax039/19234611/bax039.pdf","source":{"id":"https://openalex.org/S4210201630","display_name":"Database","issn_l":"1758-0463","issn":["1758-0463"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311647","host_organization_name":"University of Oxford","host_organization_lineage":["https://openalex.org/P4310311647"],"host_organization_lineage_names":["University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Database","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G1346897714","display_name":"Building a genome analytic resource for the lepidopteran community","funder_award_id":"BB/K019945/1","funder_id":"https://openalex.org/F4320334629","funder_display_name":"Biotechnology and Biological Sciences Research Council"},{"id":"https://openalex.org/G2452490429","display_name":"Building a genome analytic resource for the lepidopteran community","funder_award_id":"BB/K020129/1","funder_id":"https://openalex.org/F4320334629","funder_display_name":"Biotechnology and Biological Sciences Research Council"},{"id":"https://openalex.org/G3661854420","display_name":null,"funder_award_id":"BB/K020129/1","funder_id":"https://openalex.org/F4320334629","funder_display_name":"Biotechnology and Biological Sciences Research Council"},{"id":"https://openalex.org/G4810612134","display_name":null,"funder_award_id":"BB/K019945/1","funder_id":"https://openalex.org/F4320334629","funder_display_name":"Biotechnology and Biological Sciences Research Council"},{"id":"https://openalex.org/G8420442382","display_name":null,"funder_award_id":"BB/K020161/1","funder_id":"https://openalex.org/F4320334629","funder_display_name":"Biotechnology and Biological Sciences Research Council"},{"id":"https://openalex.org/G8714970698","display_name":"Building a genome analytic resource for the lepidopteran community","funder_award_id":"BB/K020161/1","funder_id":"https://openalex.org/F4320334629","funder_display_name":"Biotechnology and Biological Sciences Research Council"}],"funders":[{"id":"https://openalex.org/F4320334629","display_name":"Biotechnology and Biological Sciences Research Council","ror":"https://ror.org/00cwqg982"}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2601787998.pdf","grobid_xml":"https://content.openalex.org/works/W2601787998.grobid-xml"},"referenced_works_count":27,"referenced_works":["https://openalex.org/W1926375504","https://openalex.org/W2053551770","https://openalex.org/W2097505739","https://openalex.org/W2100791897","https://openalex.org/W2101786683","https://openalex.org/W2106780701","https://openalex.org/W2115950580","https://openalex.org/W2120141270","https://openalex.org/W2155628349","https://openalex.org/W2155983825","https://openalex.org/W2167155938","https://openalex.org/W2170648600","https://openalex.org/W2176686025","https://openalex.org/W2179282661","https://openalex.org/W2179575365","https://openalex.org/W2351507149","https://openalex.org/W2417483443","https://openalex.org/W2472351724","https://openalex.org/W2557496587","https://openalex.org/W2559577985","https://openalex.org/W2950177783","https://openalex.org/W2950218595","https://openalex.org/W2967528950","https://openalex.org/W4252232449","https://openalex.org/W4252553099","https://openalex.org/W6717041367","https://openalex.org/W6730476936"],"related_works":["https://openalex.org/W2156564520","https://openalex.org/W4307843054","https://openalex.org/W2104570606","https://openalex.org/W4210430020","https://openalex.org/W4205247356","https://openalex.org/W4248160505","https://openalex.org/W4393697786","https://openalex.org/W4393720305","https://openalex.org/W4394027046","https://openalex.org/W2122735960"],"abstract_inverted_index":{"As":[0],"the":[1,17,74,96],"generation":[2],"and":[3,24,48,57,76,89,117,120,133],"use":[4],"of":[5,15,78,86,91,105,114,131],"genomic":[6,93],"datasets":[7],"is":[8,33,40],"becoming":[9,34],"increasingly":[10],"common":[11],"in":[12],"all":[13],"areas":[14],"biology,":[16],"need":[18],"for":[19,129],"resources":[20],"to":[21,44,72,108,123,135],"collate,":[22],"analyse":[23],"present":[25],"data":[26,47,94],"from":[27],"one":[28],"or":[29],"more":[30,35],"genome":[31,46,81],"projects":[32],"pressing.":[36],"The":[37],"Ensembl":[38,80,97],"platform":[39],"a":[41,54,58,69,103],"powerful":[42],"tool":[43],"make":[45],"cross-species":[49],"analyses":[50,116],"easily":[51],"accessible":[52],"through":[53],"web":[55],"interface":[56],"comprehensive":[59],"application":[60],"programming":[61],"interface.":[62],"Here":[63],"we":[64],"introduce":[65],"GenomeHubs,":[66],"which":[67],"provide":[68,102],"containerized":[70],"environment":[71],"facilitate":[73],"setup":[75],"hosting":[77],"custom":[79],"browsers.":[82],"This":[83],"simplifies":[84],"mirroring":[85],"existing":[87],"content":[88],"import":[90],"new":[92],"into":[95],"database":[98],"schema.":[99],"GenomeHubs":[100],"also":[101],"set":[104],"analysis":[106],"containers":[107],"decorate":[109],"imported":[110],"genomes":[111],"with":[112],"results":[113],"standard":[115],"functional":[118],"annotations":[119,134],"support":[121],"export":[122],"flat":[124],"files,":[125],"including":[126],"EMBL":[127],"format":[128],"submission":[130],"assemblies":[132],"International":[136],"Nucleotide":[137],"Sequence":[138],"Database":[139],"Collaboration.":[140]},"counts_by_year":[{"year":2025,"cited_by_count":1},{"year":2024,"cited_by_count":2},{"year":2022,"cited_by_count":2},{"year":2021,"cited_by_count":2},{"year":2020,"cited_by_count":3},{"year":2019,"cited_by_count":2},{"year":2018,"cited_by_count":5},{"year":2017,"cited_by_count":3}],"updated_date":"2026-03-20T23:20:44.827607","created_date":"2025-10-10T00:00:00"}
