{"id":"https://openalex.org/W2601575661","doi":"https://doi.org/10.1093/database/bax013","title":"GrTEdb: the first web-based database of transposable elements in cotton (Gossypium raimondii)","display_name":"GrTEdb: the first web-based database of transposable elements in cotton (Gossypium raimondii)","publication_year":2017,"publication_date":"2017-01-01","ids":{"openalex":"https://openalex.org/W2601575661","doi":"https://doi.org/10.1093/database/bax013","mag":"2601575661","pmid":"https://pubmed.ncbi.nlm.nih.gov/28365739"},"language":"en","primary_location":{"id":"doi:10.1093/database/bax013","is_oa":true,"landing_page_url":"https://doi.org/10.1093/database/bax013","pdf_url":"https://academic.oup.com/database/article-pdf/doi/10.1093/database/bax013/19231195/bax013.pdf","source":{"id":"https://openalex.org/S4210201630","display_name":"Database","issn_l":"1758-0463","issn":["1758-0463"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311647","host_organization_name":"University of Oxford","host_organization_lineage":["https://openalex.org/P4310311647"],"host_organization_lineage_names":["University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Database","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://academic.oup.com/database/article-pdf/doi/10.1093/database/bax013/19231195/bax013.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5109989859","display_name":"Zhenzhen Xu","orcid":null},"institutions":[{"id":"https://openalex.org/I4210087107","display_name":"Jiangsu Academy of Agricultural Sciences","ror":"https://ror.org/001f9e125","country_code":"CN","type":"government","lineage":["https://openalex.org/I4210087107"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Zhenzhen Xu","raw_affiliation_strings":["Key Laboratory of Cotton and Rapeseed (Nanjing), The Institute of Industrial Crops, Jiangsu Academy of Agricultural Sciences, Nanjing 210014, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Key Laboratory of Cotton and Rapeseed (Nanjing), The Institute of Industrial Crops, Jiangsu Academy of Agricultural Sciences, Nanjing 210014, China","institution_ids":["https://openalex.org/I4210087107"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100375093","display_name":"Jing Liu","orcid":"https://orcid.org/0000-0003-0420-1769"},"institutions":[{"id":"https://openalex.org/I4210087107","display_name":"Jiangsu Academy of Agricultural Sciences","ror":"https://ror.org/001f9e125","country_code":"CN","type":"government","lineage":["https://openalex.org/I4210087107"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Jing Liu","raw_affiliation_strings":["Provincial Key Laboratory of Agrobiology, The Institute of Biotechnology, Jiangsu Academy of Agricultural Sciences, Nanjing 210014, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Provincial Key Laboratory of Agrobiology, The Institute of Biotechnology, Jiangsu Academy of Agricultural Sciences, Nanjing 210014, China","institution_ids":["https://openalex.org/I4210087107"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5077240903","display_name":"NI Wan-chao","orcid":null},"institutions":[{"id":"https://openalex.org/I4210087107","display_name":"Jiangsu Academy of Agricultural Sciences","ror":"https://ror.org/001f9e125","country_code":"CN","type":"government","lineage":["https://openalex.org/I4210087107"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Wanchao Ni","raw_affiliation_strings":["Key Laboratory of Cotton and Rapeseed (Nanjing), The Institute of Industrial Crops, Jiangsu Academy of Agricultural Sciences, Nanjing 210014, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Key Laboratory of Cotton and Rapeseed (Nanjing), The Institute of Industrial Crops, Jiangsu Academy of Agricultural Sciences, Nanjing 210014, China","institution_ids":["https://openalex.org/I4210087107"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5055508067","display_name":"Zhen Peng","orcid":"https://orcid.org/0000-0001-6723-3819"},"institutions":[{"id":"https://openalex.org/I4210087107","display_name":"Jiangsu Academy of Agricultural Sciences","ror":"https://ror.org/001f9e125","country_code":"CN","type":"government","lineage":["https://openalex.org/I4210087107"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Zhen Peng","raw_affiliation_strings":["Provincial Key Laboratory of Agrobiology, The Institute of Biotechnology, Jiangsu Academy of Agricultural Sciences, Nanjing 210014, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Provincial Key Laboratory of Agrobiology, The Institute of Biotechnology, Jiangsu Academy of Agricultural Sciences, Nanjing 210014, China","institution_ids":["https://openalex.org/I4210087107"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5076370267","display_name":"Yue Guo","orcid":"https://orcid.org/0000-0001-7363-319X"},"institutions":[{"id":"https://openalex.org/I4210087107","display_name":"Jiangsu Academy of Agricultural Sciences","ror":"https://ror.org/001f9e125","country_code":"CN","type":"government","lineage":["https://openalex.org/I4210087107"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Yue Guo","raw_affiliation_strings":["Provincial Key Laboratory of Agrobiology, The Institute of Biotechnology, Jiangsu Academy of Agricultural Sciences, Nanjing 210014, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Provincial Key Laboratory of Agrobiology, The Institute of Biotechnology, Jiangsu Academy of Agricultural Sciences, Nanjing 210014, China","institution_ids":["https://openalex.org/I4210087107"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5020663191","display_name":"Wuwei Ye","orcid":null},"institutions":[{"id":"https://openalex.org/I4210106793","display_name":"Cotton Research Institute","ror":"https://ror.org/01edrm178","country_code":"CN","type":"facility","lineage":["https://openalex.org/I4210106793","https://openalex.org/I4210127390","https://openalex.org/I4210138501","https://openalex.org/I4210151987"]},{"id":"https://openalex.org/I4210138501","display_name":"Chinese Academy of Agricultural Sciences","ror":"https://ror.org/0313jb750","country_code":"CN","type":"government","lineage":["https://openalex.org/I4210127390","https://openalex.org/I4210138501","https://openalex.org/I4210151987"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Wuwei Ye","raw_affiliation_strings":["State Key Laboratory of Cotton Biology, The Institute of Cotton Research, Chinese Academy of Agricultural Sciences, Anyang 455000, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"State Key Laboratory of Cotton Biology, The Institute of Cotton Research, Chinese Academy of Agricultural Sciences, Anyang 455000, China","institution_ids":["https://openalex.org/I4210106793","https://openalex.org/I4210138501"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5039622271","display_name":"Fang Huang","orcid":"https://orcid.org/0000-0001-8735-0350"},"institutions":[{"id":"https://openalex.org/I4210087107","display_name":"Jiangsu Academy of Agricultural Sciences","ror":"https://ror.org/001f9e125","country_code":"CN","type":"government","lineage":["https://openalex.org/I4210087107"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Fang Huang","raw_affiliation_strings":["Key Laboratory of Cotton and Rapeseed (Nanjing), The Institute of Industrial Crops, Jiangsu Academy of Agricultural Sciences, Nanjing 210014, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Key Laboratory of Cotton and Rapeseed (Nanjing), The Institute of Industrial Crops, Jiangsu Academy of Agricultural Sciences, Nanjing 210014, China","institution_ids":["https://openalex.org/I4210087107"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5016583063","display_name":"Xianggui Zhang","orcid":null},"institutions":[{"id":"https://openalex.org/I4210087107","display_name":"Jiangsu Academy of Agricultural Sciences","ror":"https://ror.org/001f9e125","country_code":"CN","type":"government","lineage":["https://openalex.org/I4210087107"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Xianggui Zhang","raw_affiliation_strings":["Key Laboratory of Cotton and Rapeseed (Nanjing), The Institute of Industrial Crops, Jiangsu Academy of Agricultural Sciences, Nanjing 210014, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Key Laboratory of Cotton and Rapeseed (Nanjing), The Institute of Industrial Crops, Jiangsu Academy of Agricultural Sciences, Nanjing 210014, China","institution_ids":["https://openalex.org/I4210087107"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5011208161","display_name":"Peng Xu","orcid":"https://orcid.org/0000-0003-1064-6721"},"institutions":[{"id":"https://openalex.org/I4210087107","display_name":"Jiangsu Academy of Agricultural Sciences","ror":"https://ror.org/001f9e125","country_code":"CN","type":"government","lineage":["https://openalex.org/I4210087107"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Peng Xu","raw_affiliation_strings":["Key Laboratory of Cotton and Rapeseed (Nanjing), The Institute of Industrial Crops, Jiangsu Academy of Agricultural Sciences, Nanjing 210014, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Key Laboratory of Cotton and Rapeseed (Nanjing), The Institute of Industrial Crops, Jiangsu Academy of Agricultural Sciences, Nanjing 210014, China","institution_ids":["https://openalex.org/I4210087107"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5090417505","display_name":"Qi Guo","orcid":"https://orcid.org/0000-0002-3811-3540"},"institutions":[{"id":"https://openalex.org/I4210087107","display_name":"Jiangsu Academy of Agricultural Sciences","ror":"https://ror.org/001f9e125","country_code":"CN","type":"government","lineage":["https://openalex.org/I4210087107"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Qi Guo","raw_affiliation_strings":["Key Laboratory of Cotton and Rapeseed (Nanjing), The Institute of Industrial Crops, Jiangsu Academy of Agricultural Sciences, Nanjing 210014, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Key Laboratory of Cotton and Rapeseed (Nanjing), The Institute of Industrial Crops, Jiangsu Academy of Agricultural Sciences, Nanjing 210014, China","institution_ids":["https://openalex.org/I4210087107"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5079545443","display_name":"Xinlian Shen","orcid":"https://orcid.org/0000-0002-0111-9850"},"institutions":[{"id":"https://openalex.org/I4210087107","display_name":"Jiangsu Academy of Agricultural Sciences","ror":"https://ror.org/001f9e125","country_code":"CN","type":"government","lineage":["https://openalex.org/I4210087107"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Xinlian Shen","raw_affiliation_strings":["Key Laboratory of Cotton and Rapeseed (Nanjing), The Institute of Industrial Crops, Jiangsu Academy of Agricultural Sciences, Nanjing 210014, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Key Laboratory of Cotton and Rapeseed (Nanjing), The Institute of Industrial Crops, Jiangsu Academy of Agricultural Sciences, Nanjing 210014, China","institution_ids":["https://openalex.org/I4210087107"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5100684482","display_name":"Jianchang Du","orcid":"https://orcid.org/0000-0001-5560-7713"},"institutions":[{"id":"https://openalex.org/I4210087107","display_name":"Jiangsu Academy of Agricultural Sciences","ror":"https://ror.org/001f9e125","country_code":"CN","type":"government","lineage":["https://openalex.org/I4210087107"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Jianchang Du","raw_affiliation_strings":["Provincial Key Laboratory of Agrobiology, The Institute of Biotechnology, Jiangsu Academy of Agricultural Sciences, Nanjing 210014, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Provincial Key Laboratory of Agrobiology, The Institute of Biotechnology, Jiangsu Academy of Agricultural Sciences, Nanjing 210014, China","institution_ids":["https://openalex.org/I4210087107"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":3,"corresponding_author_ids":["https://openalex.org/A5079545443","https://openalex.org/A5100684482"],"corresponding_institution_ids":["https://openalex.org/I4210087107"],"apc_list":{"value":1415,"currency":"GBP","value_usd":1735},"apc_paid":{"value":1415,"currency":"GBP","value_usd":1735},"fwci":2.3852,"has_fulltext":true,"cited_by_count":10,"citation_normalized_percentile":{"value":0.8988407,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":97},"biblio":{"volume":"2017","issue":"1","first_page":null,"last_page":null},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10434","display_name":"Chromosomal and Genetic Variations","score":0.9136999845504761,"subfield":{"id":"https://openalex.org/subfields/1110","display_name":"Plant Science"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10434","display_name":"Chromosomal and Genetic Variations","score":0.9136999845504761,"subfield":{"id":"https://openalex.org/subfields/1110","display_name":"Plant Science"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12243","display_name":"Research in Cotton Cultivation","score":0.05920000001788139,"subfield":{"id":"https://openalex.org/subfields/1110","display_name":"Plant Science"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11841","display_name":"Nuclear Structure and Function","score":0.0026000000070780516,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/genome","display_name":"Genome","score":0.7577716112136841},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.7358370423316956},{"id":"https://openalex.org/keywords/gossypium","display_name":"Gossypium","score":0.7179766893386841},{"id":"https://openalex.org/keywords/transposable-element","display_name":"Transposable element","score":0.6942257285118103},{"id":"https://openalex.org/keywords/ploidy","display_name":"Ploidy","score":0.4757287800312042},{"id":"https://openalex.org/keywords/web-server","display_name":"Web server","score":0.4446747601032257},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.37822043895721436},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.35337525606155396},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.1572822630405426},{"id":"https://openalex.org/keywords/world-wide-web","display_name":"World Wide Web","score":0.08542865514755249}],"concepts":[{"id":"https://openalex.org/C141231307","wikidata":"https://www.wikidata.org/wiki/Q7020","display_name":"Genome","level":3,"score":0.7577716112136841},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.7358370423316956},{"id":"https://openalex.org/C2776552463","wikidata":"https://www.wikidata.org/wiki/Q719312","display_name":"Gossypium","level":2,"score":0.7179766893386841},{"id":"https://openalex.org/C4918238","wikidata":"https://www.wikidata.org/wiki/Q121438","display_name":"Transposable element","level":4,"score":0.6942257285118103},{"id":"https://openalex.org/C143191323","wikidata":"https://www.wikidata.org/wiki/Q118406","display_name":"Ploidy","level":3,"score":0.4757287800312042},{"id":"https://openalex.org/C11392498","wikidata":"https://www.wikidata.org/wiki/Q11288","display_name":"Web server","level":3,"score":0.4446747601032257},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.37822043895721436},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.35337525606155396},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.1572822630405426},{"id":"https://openalex.org/C136764020","wikidata":"https://www.wikidata.org/wiki/Q466","display_name":"World Wide Web","level":1,"score":0.08542865514755249},{"id":"https://openalex.org/C110875604","wikidata":"https://www.wikidata.org/wiki/Q75","display_name":"The Internet","level":2,"score":0.0}],"mesh":[{"descriptor_ui":"D003368","descriptor_name":"Gossypium","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D003368","descriptor_name":"Gossypium","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D003368","descriptor_name":"Gossypium","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D004171","descriptor_name":"Diploidy","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D004171","descriptor_name":"Diploidy","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D004171","descriptor_name":"Diploidy","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D004251","descriptor_name":"DNA Transposable Elements","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D004251","descriptor_name":"DNA Transposable Elements","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D004251","descriptor_name":"DNA Transposable Elements","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D018744","descriptor_name":"DNA, Plant","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D018744","descriptor_name":"DNA, Plant","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D018744","descriptor_name":"DNA, Plant","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D018745","descriptor_name":"Genome, Plant","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D018745","descriptor_name":"Genome, Plant","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D018745","descriptor_name":"Genome, Plant","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030561","descriptor_name":"Databases, Nucleic Acid","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030561","descriptor_name":"Databases, Nucleic Acid","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030561","descriptor_name":"Databases, Nucleic Acid","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D057891","descriptor_name":"Tetraploidy","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D057891","descriptor_name":"Tetraploidy","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D057891","descriptor_name":"Tetraploidy","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D064878","descriptor_name":"Web Browser","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D064878","descriptor_name":"Web Browser","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D064878","descriptor_name":"Web Browser","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":3,"locations":[{"id":"doi:10.1093/database/bax013","is_oa":true,"landing_page_url":"https://doi.org/10.1093/database/bax013","pdf_url":"https://academic.oup.com/database/article-pdf/doi/10.1093/database/bax013/19231195/bax013.pdf","source":{"id":"https://openalex.org/S4210201630","display_name":"Database","issn_l":"1758-0463","issn":["1758-0463"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311647","host_organization_name":"University of Oxford","host_organization_lineage":["https://openalex.org/P4310311647"],"host_organization_lineage_names":["University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Database","raw_type":"journal-article"},{"id":"pmid:28365739","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/28365739","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Database : the journal of biological databases and curation","raw_type":null},{"id":"pmh:oai:europepmc.org:4323754","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/5467567","pdf_url":null,"source":{"id":"https://openalex.org/S4306400806","display_name":"Europe PMC (PubMed Central)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1303153112","host_organization_name":"European Bioinformatics Institute","host_organization_lineage":["https://openalex.org/I1303153112"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1093/database/bax013","is_oa":true,"landing_page_url":"https://doi.org/10.1093/database/bax013","pdf_url":"https://academic.oup.com/database/article-pdf/doi/10.1093/database/bax013/19231195/bax013.pdf","source":{"id":"https://openalex.org/S4210201630","display_name":"Database","issn_l":"1758-0463","issn":["1758-0463"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311647","host_organization_name":"University of Oxford","host_organization_lineage":["https://openalex.org/P4310311647"],"host_organization_lineage_names":["University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Database","raw_type":"journal-article"},"sustainable_development_goals":[{"display_name":"Life in Land","id":"https://metadata.un.org/sdg/15","score":0.5899999737739563}],"awards":[{"id":"https://openalex.org/G3307002702","display_name":null,"funder_award_id":"31471545","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G532227810","display_name":"\u5927\u8c46\u8f6c\u5ea7\u5b50\u7279\u6b8a\u8f6c\u5ea7\u89c4\u5f8b\u7684\u7814\u7a76","funder_award_id":"31370266","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"}],"funders":[{"id":"https://openalex.org/F4320309870","display_name":"Jiangsu Agricultural Science and Technology Innovation Fund","ror":"https://ror.org/0335n2618"},{"id":"https://openalex.org/F4320321001","display_name":"National Natural Science Foundation of China","ror":"https://ror.org/01h0zpd94"},{"id":"https://openalex.org/F4320321605","display_name":"Government of Jiangsu Province","ror":"https://ror.org/004svx814"}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2601575661.pdf","grobid_xml":"https://content.openalex.org/works/W2601575661.grobid-xml"},"referenced_works_count":36,"referenced_works":["https://openalex.org/W1584410603","https://openalex.org/W1976182511","https://openalex.org/W1981467948","https://openalex.org/W1998137186","https://openalex.org/W2015690477","https://openalex.org/W2018789136","https://openalex.org/W2030461428","https://openalex.org/W2033611197","https://openalex.org/W2042086471","https://openalex.org/W2048540261","https://openalex.org/W2053555525","https://openalex.org/W2056298000","https://openalex.org/W2059864757","https://openalex.org/W2071501400","https://openalex.org/W2076656039","https://openalex.org/W2093776734","https://openalex.org/W2100234791","https://openalex.org/W2102028742","https://openalex.org/W2108904414","https://openalex.org/W2112138433","https://openalex.org/W2112494824","https://openalex.org/W2116659955","https://openalex.org/W2123036424","https://openalex.org/W2128018453","https://openalex.org/W2129729311","https://openalex.org/W2139399965","https://openalex.org/W2142466527","https://openalex.org/W2144430955","https://openalex.org/W2146641337","https://openalex.org/W2157668348","https://openalex.org/W2159549123","https://openalex.org/W2165226158","https://openalex.org/W2166293717","https://openalex.org/W2167737093","https://openalex.org/W2175370850","https://openalex.org/W2353701210"],"related_works":["https://openalex.org/W2053969879","https://openalex.org/W2082641564","https://openalex.org/W2107333779","https://openalex.org/W2790772971","https://openalex.org/W3108190435","https://openalex.org/W3015258461","https://openalex.org/W1964419640","https://openalex.org/W2382079765","https://openalex.org/W2951481590","https://openalex.org/W2112361907"],"abstract_inverted_index":{"Although":[0],"several":[1],"diploid":[2],"and":[3,31,41,62,69,109,120,129,144,153,162,166,183,190],"tetroploid":[4],"Gossypium":[5,45,148,172,194],"species":[6],"genomes":[7],"have":[8,72],"been":[9,73],"sequenced,":[10],"the":[11,24,35,81,114,133,175,185],"well":[12],"annotated":[13,61],"web-based":[14,43,115],"transposable":[15,47],"elements":[16,48,71],"(TEs)":[17],"database":[18,49],"is":[19],"lacking.":[20],"To":[21],"better":[22],"understand":[23],"roles":[25],"of":[26,34,55,83,177],"TEs":[27,58,134,157,178,189],"in":[28,65,138,158,193],"structural,":[29],"functional":[30],"evolutionary":[32],"dynamics":[33],"cotton":[36],"genome,":[37,68],"a":[38],"comprehensive,":[39],"specific,":[40],"user-friendly":[42],"database,":[44],"raimondii":[46,67,143,160],"(GrTEdb),":[50],"was":[51],"constructed.":[52],"A":[53],"total":[54],"14":[56,110],"332":[57],"were":[59,123],"structurally":[60],"clearly":[63],"categorized":[64],"G.":[66,142,159],"these":[70],"classified":[74],"into":[75],"seven":[76],"distinct":[77],"superfamilies":[78],"based":[79],"on":[80,179],"order":[82],"protein-coding":[84,191],"domains,":[85],"structures":[86],"and/or":[87],"sequence":[88,116],"similarity,":[89],"including":[90],"2929":[91],"Copia-like":[92],"elements,":[93,97],"10":[94],"368":[95],"Gypsy-like":[96],"299":[98],"L1":[99],",":[100,103,106,161],"12":[101],"Mutators":[102],"435":[104],"PIF-Harbingers":[105],"275":[107],"CACTAs":[108],"Helitrons":[111],".":[112],"Meanwhile,":[113],"browsing,":[117],"searching,":[118],"downloading":[119],"blast":[121],"tool":[122],"implemented":[124],"to":[125,131],"help":[126],"users":[127],"easily":[128],"effectively":[130],"annotate":[132],"or":[135,170],"TE":[136],"fragments":[137],"genomic":[139],"sequences":[140],"from":[141],"other":[145],"closely":[146],"related":[147,155],"species.":[149,195],"GrTEdb":[150],"provides":[151],"resources":[152],"information":[154],"with":[156],"will":[163],"facilitate":[164],"gene":[165],"genome":[167],"analyses":[168],"within":[169],"across":[171],"species,":[173],"evaluating":[174],"impact":[176],"their":[180],"host":[181],"genomes,":[182],"investigating":[184],"potential":[186],"interaction":[187],"between":[188],"genes":[192],"Database":[196],"URL:":[197],"http://www.grtedb.org/.":[198]},"counts_by_year":[{"year":2025,"cited_by_count":1},{"year":2023,"cited_by_count":1},{"year":2021,"cited_by_count":3},{"year":2020,"cited_by_count":3},{"year":2018,"cited_by_count":1},{"year":2017,"cited_by_count":1}],"updated_date":"2026-07-22T07:51:19.307946","created_date":"2025-10-10T00:00:00"}
