{"id":"https://openalex.org/W2604293371","doi":"https://doi.org/10.1093/database/baw170","title":"PCPPI: a comprehensive database for the prediction of Penicillium\u2013crop protein\u2013protein interactions","display_name":"PCPPI: a comprehensive database for the prediction of Penicillium\u2013crop protein\u2013protein interactions","publication_year":2017,"publication_date":"2017-01-01","ids":{"openalex":"https://openalex.org/W2604293371","doi":"https://doi.org/10.1093/database/baw170","mag":"2604293371","pmid":"https://pubmed.ncbi.nlm.nih.gov/28365721"},"language":"en","primary_location":{"id":"doi:10.1093/database/baw170","is_oa":true,"landing_page_url":"https://doi.org/10.1093/database/baw170","pdf_url":"https://academic.oup.com/database/article-pdf/doi/10.1093/database/baw170/19229914/baw170.pdf","source":{"id":"https://openalex.org/S4210201630","display_name":"Database","issn_l":"1758-0463","issn":["1758-0463"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311647","host_organization_name":"University of Oxford","host_organization_lineage":["https://openalex.org/P4310311647"],"host_organization_lineage_names":["University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Database","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://academic.oup.com/database/article-pdf/doi/10.1093/database/baw170/19229914/baw170.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5032841079","display_name":"Junyang Yue","orcid":"https://orcid.org/0000-0002-5299-0160"},"institutions":[{"id":"https://openalex.org/I16365422","display_name":"Hefei University of Technology","ror":"https://ror.org/02czkny70","country_code":"CN","type":"education","lineage":["https://openalex.org/I16365422"]},{"id":"https://openalex.org/I24185976","display_name":"Sichuan University","ror":"https://ror.org/011ashp19","country_code":"CN","type":"education","lineage":["https://openalex.org/I24185976"]},{"id":"https://openalex.org/I4391767678","display_name":"State Key Laboratory of Hydraulics and Mountain River Engineering","ror":"https://ror.org/02169wb20","country_code":null,"type":"facility","lineage":["https://openalex.org/I24185976","https://openalex.org/I4391767678"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Junyang Yue","raw_affiliation_strings":["College of Food Science and Engineering, Hefei University of Technology, Hefei 230009, China","Ministry of Education Key Laboratory for Bio-resource and Eco-environment, College of Life Science and State Key Laboratory of Hydraulics and Mountain River Engineering, Sichuan University, Chengdu 610064, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"College of Food Science and Engineering, Hefei University of Technology, Hefei 230009, China","institution_ids":["https://openalex.org/I16365422"]},{"raw_affiliation_string":"Ministry of Education Key Laboratory for Bio-resource and Eco-environment, College of Life Science and State Key Laboratory of Hydraulics and Mountain River Engineering, Sichuan University, Chengdu 610064, China","institution_ids":["https://openalex.org/I24185976","https://openalex.org/I4391767678"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5115588309","display_name":"Danfeng Zhang","orcid":null},"institutions":[{"id":"https://openalex.org/I16365422","display_name":"Hefei University of Technology","ror":"https://ror.org/02czkny70","country_code":"CN","type":"education","lineage":["https://openalex.org/I16365422"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Danfeng Zhang","raw_affiliation_strings":["College of Food Science and Engineering, Hefei University of Technology, Hefei 230009, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"College of Food Science and Engineering, Hefei University of Technology, Hefei 230009, China","institution_ids":["https://openalex.org/I16365422"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5057896799","display_name":"Rongjun Ban","orcid":null},"institutions":[{"id":"https://openalex.org/I126520041","display_name":"University of Science and Technology of China","ror":"https://ror.org/04c4dkn09","country_code":"CN","type":"education","lineage":["https://openalex.org/I126520041","https://openalex.org/I19820366"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Rongjun Ban","raw_affiliation_strings":["School of Information Science and Technology, University of Science and Technology of China, Hefei 230026, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Information Science and Technology, University of Science and Technology of China, Hefei 230026, China","institution_ids":["https://openalex.org/I126520041"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5004260857","display_name":"Xiaojing Ma","orcid":"https://orcid.org/0000-0002-4175-113X"},"institutions":[{"id":"https://openalex.org/I16365422","display_name":"Hefei University of Technology","ror":"https://ror.org/02czkny70","country_code":"CN","type":"education","lineage":["https://openalex.org/I16365422"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Xiaojing Ma","raw_affiliation_strings":["School of Medical Engineering, Hefei University of Technology, Hefei 230009, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Medical Engineering, Hefei University of Technology, Hefei 230009, China","institution_ids":["https://openalex.org/I16365422"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100652779","display_name":"Danyang Chen","orcid":"https://orcid.org/0009-0000-8044-2404"},"institutions":[{"id":"https://openalex.org/I16365422","display_name":"Hefei University of Technology","ror":"https://ror.org/02czkny70","country_code":"CN","type":"education","lineage":["https://openalex.org/I16365422"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Danyang Chen","raw_affiliation_strings":["College of Food Science and Engineering, Hefei University of Technology, Hefei 230009, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"College of Food Science and Engineering, Hefei University of Technology, Hefei 230009, China","institution_ids":["https://openalex.org/I16365422"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5041012119","display_name":"Guangwei Li","orcid":"https://orcid.org/0000-0001-6128-675X"},"institutions":[{"id":"https://openalex.org/I16365422","display_name":"Hefei University of Technology","ror":"https://ror.org/02czkny70","country_code":"CN","type":"education","lineage":["https://openalex.org/I16365422"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Guangwei Li","raw_affiliation_strings":["College of Food Science and Engineering, Hefei University of Technology, Hefei 230009, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"College of Food Science and Engineering, Hefei University of Technology, Hefei 230009, China","institution_ids":["https://openalex.org/I16365422"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100409763","display_name":"Jia Liu","orcid":"https://orcid.org/0000-0003-3614-9459"},"institutions":[{"id":"https://openalex.org/I16365422","display_name":"Hefei University of Technology","ror":"https://ror.org/02czkny70","country_code":"CN","type":"education","lineage":["https://openalex.org/I16365422"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Jia Liu","raw_affiliation_strings":["College of Food Science and Engineering, Hefei University of Technology, Hefei 230009, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"College of Food Science and Engineering, Hefei University of Technology, Hefei 230009, China","institution_ids":["https://openalex.org/I16365422"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5059008342","display_name":"Michael Wisniewski","orcid":"https://orcid.org/0000-0002-7481-5590"},"institutions":[{"id":"https://openalex.org/I1312222531","display_name":"Agricultural Research Service","ror":"https://ror.org/02d2m2044","country_code":"US","type":"government","lineage":["https://openalex.org/I1312222531","https://openalex.org/I1336096307"]},{"id":"https://openalex.org/I1336096307","display_name":"United States Department of Agriculture","ror":"https://ror.org/01na82s61","country_code":"US","type":"government","lineage":["https://openalex.org/I1336096307"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Michael Wisniewski","raw_affiliation_strings":["United States Department of Agriculture-Agricultural Research Service (USDA-ARS), Kearneysville, WV 25430, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"United States Department of Agriculture-Agricultural Research Service (USDA-ARS), Kearneysville, WV 25430, USA","institution_ids":["https://openalex.org/I1336096307","https://openalex.org/I1312222531"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5091475348","display_name":"Samir Droby","orcid":"https://orcid.org/0000-0003-2727-8697"},"institutions":[{"id":"https://openalex.org/I376102","display_name":"Agricultural Research Organization","ror":"https://ror.org/05hbrxp80","country_code":"IL","type":"government","lineage":["https://openalex.org/I376102"]}],"countries":["IL"],"is_corresponding":false,"raw_author_name":"Samir Droby","raw_affiliation_strings":["Agricultural Research Organization (ARO), The Volcani Center, 50250 Bet Dagan, Israel"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Agricultural Research Organization (ARO), The Volcani Center, 50250 Bet Dagan, Israel","institution_ids":["https://openalex.org/I376102"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5103030951","display_name":"Yongsheng Liu","orcid":"https://orcid.org/0000-0002-0956-8693"},"institutions":[{"id":"https://openalex.org/I16365422","display_name":"Hefei University of Technology","ror":"https://ror.org/02czkny70","country_code":"CN","type":"education","lineage":["https://openalex.org/I16365422"]},{"id":"https://openalex.org/I24185976","display_name":"Sichuan University","ror":"https://ror.org/011ashp19","country_code":"CN","type":"education","lineage":["https://openalex.org/I24185976"]},{"id":"https://openalex.org/I4391767678","display_name":"State Key Laboratory of Hydraulics and Mountain River Engineering","ror":"https://ror.org/02169wb20","country_code":null,"type":"facility","lineage":["https://openalex.org/I24185976","https://openalex.org/I4391767678"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Yongsheng Liu","raw_affiliation_strings":["College of Food Science and Engineering, Hefei University of Technology, Hefei 230009, China","Ministry of Education Key Laboratory for Bio-resource and Eco-environment, College of Life Science and State Key Laboratory of Hydraulics and Mountain River Engineering, Sichuan University, Chengdu 610064, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"College of Food Science and Engineering, Hefei University of Technology, Hefei 230009, China","institution_ids":["https://openalex.org/I16365422"]},{"raw_affiliation_string":"Ministry of Education Key Laboratory for Bio-resource and Eco-environment, College of Life Science and State Key Laboratory of Hydraulics and Mountain River Engineering, Sichuan University, Chengdu 610064, China","institution_ids":["https://openalex.org/I24185976","https://openalex.org/I4391767678"]}]}],"institutions":[],"countries_distinct_count":3,"institutions_distinct_count":10,"corresponding_author_ids":["https://openalex.org/A5103030951"],"corresponding_institution_ids":["https://openalex.org/I16365422","https://openalex.org/I24185976","https://openalex.org/I4391767678"],"apc_list":{"value":1415,"currency":"GBP","value_usd":1735},"apc_paid":{"value":1415,"currency":"GBP","value_usd":1735},"fwci":0.4485,"has_fulltext":false,"cited_by_count":11,"citation_normalized_percentile":{"value":0.62696535,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":98},"biblio":{"volume":"2017","issue":"1","first_page":null,"last_page":null},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9584000110626221,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9584000110626221,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.005799999926239252,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10497","display_name":"Fungal and yeast genetics research","score":0.003800000064074993,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/penicillium-expansum","display_name":"Penicillium expansum","score":0.8372451066970825},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.6088564395904541},{"id":"https://openalex.org/keywords/crop","display_name":"Crop","score":0.5339576005935669},{"id":"https://openalex.org/keywords/protein\u2013protein-interaction","display_name":"Protein\u2013protein interaction","score":0.5336438417434692},{"id":"https://openalex.org/keywords/penicillium","display_name":"Penicillium","score":0.4874472916126251},{"id":"https://openalex.org/keywords/gene-ontology","display_name":"Gene ontology","score":0.4504963159561157},{"id":"https://openalex.org/keywords/protein-domain","display_name":"Protein domain","score":0.4210954010486603},{"id":"https://openalex.org/keywords/host","display_name":"Host (biology)","score":0.4169846773147583},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.40461382269859314},{"id":"https://openalex.org/keywords/database","display_name":"Database","score":0.38741418719291687},{"id":"https://openalex.org/keywords/biotechnology","display_name":"Biotechnology","score":0.34561002254486084},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.2693629860877991},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.23583203554153442},{"id":"https://openalex.org/keywords/botany","display_name":"Botany","score":0.21709251403808594},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.2162938416004181},{"id":"https://openalex.org/keywords/agronomy","display_name":"Agronomy","score":0.13983136415481567}],"concepts":[{"id":"https://openalex.org/C2780630512","wikidata":"https://www.wikidata.org/wiki/Q147358","display_name":"Penicillium expansum","level":3,"score":0.8372451066970825},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.6088564395904541},{"id":"https://openalex.org/C137580998","wikidata":"https://www.wikidata.org/wiki/Q235352","display_name":"Crop","level":2,"score":0.5339576005935669},{"id":"https://openalex.org/C11804247","wikidata":"https://www.wikidata.org/wiki/Q896177","display_name":"Protein\u2013protein interaction","level":2,"score":0.5336438417434692},{"id":"https://openalex.org/C2777484150","wikidata":"https://www.wikidata.org/wiki/Q843136","display_name":"Penicillium","level":2,"score":0.4874472916126251},{"id":"https://openalex.org/C2987395477","wikidata":"https://www.wikidata.org/wiki/Q135085","display_name":"Gene ontology","level":4,"score":0.4504963159561157},{"id":"https://openalex.org/C144292202","wikidata":"https://www.wikidata.org/wiki/Q898273","display_name":"Protein domain","level":3,"score":0.4210954010486603},{"id":"https://openalex.org/C126831891","wikidata":"https://www.wikidata.org/wiki/Q221673","display_name":"Host (biology)","level":2,"score":0.4169846773147583},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.40461382269859314},{"id":"https://openalex.org/C77088390","wikidata":"https://www.wikidata.org/wiki/Q8513","display_name":"Database","level":1,"score":0.38741418719291687},{"id":"https://openalex.org/C150903083","wikidata":"https://www.wikidata.org/wiki/Q7108","display_name":"Biotechnology","level":1,"score":0.34561002254486084},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.2693629860877991},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.23583203554153442},{"id":"https://openalex.org/C59822182","wikidata":"https://www.wikidata.org/wiki/Q441","display_name":"Botany","level":1,"score":0.21709251403808594},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.2162938416004181},{"id":"https://openalex.org/C6557445","wikidata":"https://www.wikidata.org/wiki/Q173113","display_name":"Agronomy","level":1,"score":0.13983136415481567},{"id":"https://openalex.org/C150194340","wikidata":"https://www.wikidata.org/wiki/Q26972","display_name":"Gene expression","level":3,"score":0.0},{"id":"https://openalex.org/C157670687","wikidata":"https://www.wikidata.org/wiki/Q426933","display_name":"Postharvest","level":2,"score":0.0}],"mesh":[{"descriptor_ui":"D000072417","descriptor_name":"Protein Domains","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000072417","descriptor_name":"Protein Domains","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000072417","descriptor_name":"Protein Domains","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D005656","descriptor_name":"Fungal Proteins","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D005656","descriptor_name":"Fungal Proteins","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D005656","descriptor_name":"Fungal Proteins","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D005656","descriptor_name":"Fungal Proteins","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D005656","descriptor_name":"Fungal Proteins","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D005656","descriptor_name":"Fungal Proteins","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D010407","descriptor_name":"Penicillium","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D010407","descriptor_name":"Penicillium","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D010407","descriptor_name":"Penicillium","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D010407","descriptor_name":"Penicillium","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D010407","descriptor_name":"Penicillium","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D010407","descriptor_name":"Penicillium","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D010940","descriptor_name":"Plant Proteins","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D010940","descriptor_name":"Plant Proteins","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D010940","descriptor_name":"Plant Proteins","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D010940","descriptor_name":"Plant Proteins","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D010940","descriptor_name":"Plant Proteins","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D010940","descriptor_name":"Plant Proteins","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D018556","descriptor_name":"Crops, Agricultural","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D018556","descriptor_name":"Crops, Agricultural","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D018556","descriptor_name":"Crops, Agricultural","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D018556","descriptor_name":"Crops, Agricultural","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D018556","descriptor_name":"Crops, Agricultural","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D018556","descriptor_name":"Crops, Agricultural","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D018556","descriptor_name":"Crops, Agricultural","qualifier_ui":"Q000382","qualifier_name":"microbiology","is_major_topic":false},{"descriptor_ui":"D018556","descriptor_name":"Crops, Agricultural","qualifier_ui":"Q000382","qualifier_name":"microbiology","is_major_topic":false},{"descriptor_ui":"D018556","descriptor_name":"Crops, Agricultural","qualifier_ui":"Q000382","qualifier_name":"microbiology","is_major_topic":false},{"descriptor_ui":"D030562","descriptor_name":"Databases, Protein","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030562","descriptor_name":"Databases, Protein","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030562","descriptor_name":"Databases, Protein","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true}],"locations_count":3,"locations":[{"id":"doi:10.1093/database/baw170","is_oa":true,"landing_page_url":"https://doi.org/10.1093/database/baw170","pdf_url":"https://academic.oup.com/database/article-pdf/doi/10.1093/database/baw170/19229914/baw170.pdf","source":{"id":"https://openalex.org/S4210201630","display_name":"Database","issn_l":"1758-0463","issn":["1758-0463"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311647","host_organization_name":"University of Oxford","host_organization_lineage":["https://openalex.org/P4310311647"],"host_organization_lineage_names":["University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Database","raw_type":"journal-article"},{"id":"pmid:28365721","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/28365721","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Database : the journal of biological databases and curation","raw_type":null},{"id":"pmh:oai:europepmc.org:4323676","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/5467543","pdf_url":null,"source":{"id":"https://openalex.org/S4306400806","display_name":"Europe PMC (PubMed Central)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1303153112","host_organization_name":"European Bioinformatics Institute","host_organization_lineage":["https://openalex.org/I1303153112"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1093/database/baw170","is_oa":true,"landing_page_url":"https://doi.org/10.1093/database/baw170","pdf_url":"https://academic.oup.com/database/article-pdf/doi/10.1093/database/baw170/19229914/baw170.pdf","source":{"id":"https://openalex.org/S4210201630","display_name":"Database","issn_l":"1758-0463","issn":["1758-0463"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311647","host_organization_name":"University of Oxford","host_organization_lineage":["https://openalex.org/P4310311647"],"host_organization_lineage_names":["University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Database","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":79,"referenced_works":["https://openalex.org/W1736037187","https://openalex.org/W1977416493","https://openalex.org/W1984056103","https://openalex.org/W1989034333","https://openalex.org/W1997405626","https://openalex.org/W2002582122","https://openalex.org/W2007737173","https://openalex.org/W2010825547","https://openalex.org/W2020457507","https://openalex.org/W2021694561","https://openalex.org/W2029574260","https://openalex.org/W2037579652","https://openalex.org/W2043654227","https://openalex.org/W2051980509","https://openalex.org/W2060584527","https://openalex.org/W2071618396","https://openalex.org/W2076826701","https://openalex.org/W2083825307","https://openalex.org/W2084711836","https://openalex.org/W2085963663","https://openalex.org/W2103017472","https://openalex.org/W2107915254","https://openalex.org/W2113474040","https://openalex.org/W2113849888","https://openalex.org/W2115048111","https://openalex.org/W2122515515","https://openalex.org/W2124249167","https://openalex.org/W2133177319","https://openalex.org/W2133911869","https://openalex.org/W2135346076","https://openalex.org/W2136266813","https://openalex.org/W2139456772","https://openalex.org/W2142678478","https://openalex.org/W2147526198","https://openalex.org/W2147874847","https://openalex.org/W2156506133","https://openalex.org/W2159126118","https://openalex.org/W2159788203","https://openalex.org/W2161069068","https://openalex.org/W2164813401","https://openalex.org/W2165664563","https://openalex.org/W2168637722","https://openalex.org/W2200255921","https://openalex.org/W2240007006","https://openalex.org/W2294361252","https://openalex.org/W2342905538","https://openalex.org/W6637542729","https://openalex.org/W6647447064","https://openalex.org/W6649488116","https://openalex.org/W6651030525","https://openalex.org/W6652249797","https://openalex.org/W6655312483","https://openalex.org/W6657844225","https://openalex.org/W6661228279","https://openalex.org/W6663325354","https://openalex.org/W6665580122","https://openalex.org/W6669747095","https://openalex.org/W6671288197","https://openalex.org/W6671401058","https://openalex.org/W6672048014","https://openalex.org/W6677232531","https://openalex.org/W6677947831","https://openalex.org/W6679717162","https://openalex.org/W6679945185","https://openalex.org/W6680076426","https://openalex.org/W6680098139","https://openalex.org/W6680740937","https://openalex.org/W6681765588","https://openalex.org/W6681913882","https://openalex.org/W6683496858","https://openalex.org/W6683510461","https://openalex.org/W6683595717","https://openalex.org/W6684498211","https://openalex.org/W6684634542","https://openalex.org/W6685081166","https://openalex.org/W6690262792","https://openalex.org/W6697276272","https://openalex.org/W6704521792","https://openalex.org/W7073800979"],"related_works":["https://openalex.org/W2089867921","https://openalex.org/W2081941916","https://openalex.org/W2079008129","https://openalex.org/W3206049835","https://openalex.org/W2559662883","https://openalex.org/W2045131140","https://openalex.org/W2010825547","https://openalex.org/W2364094720","https://openalex.org/W2095910716","https://openalex.org/W1980334039"],"abstract_inverted_index":{"Penicillium":[0,41,86],"expansum":[1,76],",":[2],"the":[3,12,59,68,85,96,139,154,161,169,181,188,197],"causal":[4],"agent":[5],"of":[6,11,21,58,160,171,190],"blue":[7],"mold,":[8],"is":[9,44,92],"one":[10],"most":[13],"prevalent":[14],"post-harvest":[15],"pathogens,":[16],"infecting":[17],"a":[18,45],"wide":[19],"range":[20],"crops":[22,27],"after":[23],"harvest.":[24],"In":[25],"response,":[26],"have":[28,82],"evolved":[29],"various":[30],"defense":[31],"systems":[32,103],"to":[33,66,152,186,196],"protect":[34],"themselves":[35],"against":[36],"this":[37],"and":[38,48,52,56,77,104,123,134,193],"other":[39],"pathogens.":[40],"-crop":[42],"interaction":[43],"multifaceted":[46],"process":[47],"mediated":[49],"by":[50],"pathogen-":[51],"host-derived":[53],"proteins.":[54],"Identification":[55],"characterization":[57],"inter-species":[60],"protein-protein":[61],"interactions":[62,100,107,122,174,192],"(PPIs)":[63],"are":[64,184],"fundamental":[65],"elucidating":[67],"molecular":[69],"mechanisms":[70],"underlying":[71],"infection":[72],"processes":[73],"between":[74],"P.":[75],"plant":[78],"crops.":[79],"Here,":[80],"we":[81],"developed":[83],"PCPPI,":[84],"-Crop":[87],"Protein-Protein":[88],"Interactions":[89],"database,":[90],"which":[91],"constructed":[93],"based":[94],"on":[95,117],"experimentally":[97],"determined":[98],"orthologous":[99],"in":[101,109,175],"pathogen-plant":[102],"available":[105,195],"domain-domain":[106],"(DDIs)":[108],"each":[110],"PPI.":[111],"Thus":[112],"far,":[113],"it":[114],"stores":[115],"information":[116],"9911":[118],"proteins,":[119],"439":[120],"904":[121],"seven":[124],"host":[125],"species,":[126],"including":[127],"apple,":[128],"kiwifruit,":[129],"maize,":[130],"pear,":[131],"rice,":[132],"strawberry":[133],"tomato.":[135],"Further":[136],"analysis":[137],"through":[138],"gene":[140],"ontology":[141],"(GO)":[142],"annotation":[143],"indicated":[144],"that":[145,179],"proteins":[146],"with":[147],"more":[148],"interacting":[149],"partners":[150],"tend":[151],"execute":[153],"essential":[155],"function.":[156],"Significantly,":[157],"semantic":[158],"statistics":[159],"GO":[162],"terms":[163],"also":[164],"provided":[165],"strong":[166],"support":[167],"for":[168],"accuracy":[170],"our":[172],"predicted":[173],"PCPPI.":[176],"We":[177],"believe":[178],"all":[180],"PCPPI":[182],"datasets":[183],"helpful":[185],"facilitate":[187],"study":[189],"pathogen-crop":[191],"freely":[194],"research":[198],"community.":[199],"Database":[200],"URL:":[201],":":[202],"http://bdg.hfut.edu.cn/pcppi/index.html.":[203]},"counts_by_year":[{"year":2023,"cited_by_count":2},{"year":2021,"cited_by_count":5},{"year":2020,"cited_by_count":1},{"year":2018,"cited_by_count":2},{"year":2017,"cited_by_count":1}],"updated_date":"2026-05-19T21:40:30.786675","created_date":"2025-10-10T00:00:00"}
