{"id":"https://openalex.org/W4233213569","doi":"https://doi.org/10.1093/database/baw134","title":"Mining biomedical images towards valuable information retrieval in biomedical and life sciences","display_name":"Mining biomedical images towards valuable information retrieval in biomedical and life sciences","publication_year":2016,"publication_date":"2016-01-01","ids":{"openalex":"https://openalex.org/W4233213569","doi":"https://doi.org/10.1093/database/baw134"},"language":"en","primary_location":{"id":"doi:10.1093/database/baw134","is_oa":true,"landing_page_url":"https://doi.org/10.1093/database/baw134","pdf_url":"https://academic.oup.com/database/article-pdf/doi/10.1093/database/baw134/8225177/baw134.pdf","source":{"id":"https://openalex.org/S4210201630","display_name":"Database","issn_l":"1758-0463","issn":["1758-0463"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311647","host_organization_name":"University of Oxford","host_organization_lineage":["https://openalex.org/P4310311647"],"host_organization_lineage_names":["University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Database","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://academic.oup.com/database/article-pdf/doi/10.1093/database/baw134/8225177/baw134.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5062451681","display_name":"Zeeshan Ahmed","orcid":"https://orcid.org/0000-0002-7065-1699"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Zeeshan Ahmed","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5032158569","display_name":"Saman Zeeshan","orcid":"https://orcid.org/0000-0001-9278-6204"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Saman Zeeshan","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"last","author":{"id":"https://openalex.org/A5086202312","display_name":"Thomas Dandekar","orcid":"https://orcid.org/0000-0003-1886-7625"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Thomas Dandekar","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]}],"institutions":[],"countries_distinct_count":0,"institutions_distinct_count":0,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":{"value":1415,"currency":"GBP","value_usd":1735},"apc_paid":{"value":1415,"currency":"GBP","value_usd":1735},"fwci":0.4809,"has_fulltext":false,"cited_by_count":7,"citation_normalized_percentile":{"value":0.70933302,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":96},"biblio":{"volume":"2016","issue":null,"first_page":"baw134","last_page":"baw134"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9501000046730042,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9501000046730042,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/information-retrieval","display_name":"Information retrieval","score":0.6283920407295227},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.5928274989128113},{"id":"https://openalex.org/keywords/data-science","display_name":"Data science","score":0.4227454960346222},{"id":"https://openalex.org/keywords/world-wide-web","display_name":"World Wide Web","score":0.32145315408706665}],"concepts":[{"id":"https://openalex.org/C23123220","wikidata":"https://www.wikidata.org/wiki/Q816826","display_name":"Information retrieval","level":1,"score":0.6283920407295227},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.5928274989128113},{"id":"https://openalex.org/C2522767166","wikidata":"https://www.wikidata.org/wiki/Q2374463","display_name":"Data science","level":1,"score":0.4227454960346222},{"id":"https://openalex.org/C136764020","wikidata":"https://www.wikidata.org/wiki/Q466","display_name":"World Wide Web","level":1,"score":0.32145315408706665}],"mesh":[],"locations_count":3,"locations":[{"id":"doi:10.1093/database/baw134","is_oa":true,"landing_page_url":"https://doi.org/10.1093/database/baw134","pdf_url":"https://academic.oup.com/database/article-pdf/doi/10.1093/database/baw134/8225177/baw134.pdf","source":{"id":"https://openalex.org/S4210201630","display_name":"Database","issn_l":"1758-0463","issn":["1758-0463"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311647","host_organization_name":"University of Oxford","host_organization_lineage":["https://openalex.org/P4310311647"],"host_organization_lineage_names":["University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Database","raw_type":"journal-article"},{"id":"pmh:oai:open-archive.highwire.org:databa:2016/0/baw134","is_oa":false,"landing_page_url":"http://database.oxfordjournals.org/cgi/content/short/2016/0/baw134","pdf_url":null,"source":{"id":"https://openalex.org/S4406923041","display_name":"HighWire Press Open Archive","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"TEXT"},{"id":"pmh:oai:pubmedcentral.nih.gov:5012456","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/5012456","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Database (Oxford)","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1093/database/baw134","is_oa":true,"landing_page_url":"https://doi.org/10.1093/database/baw134","pdf_url":"https://academic.oup.com/database/article-pdf/doi/10.1093/database/baw134/8225177/baw134.pdf","source":{"id":"https://openalex.org/S4210201630","display_name":"Database","issn_l":"1758-0463","issn":["1758-0463"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311647","host_organization_name":"University of Oxford","host_organization_lineage":["https://openalex.org/P4310311647"],"host_organization_lineage_names":["University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Database","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W4233213569.pdf","grobid_xml":"https://content.openalex.org/works/W4233213569.grobid-xml"},"referenced_works_count":0,"referenced_works":[],"related_works":["https://openalex.org/W2748952813","https://openalex.org/W2390279801","https://openalex.org/W2358668433","https://openalex.org/W2376932109","https://openalex.org/W2001405890","https://openalex.org/W2382290278","https://openalex.org/W2478288626","https://openalex.org/W2350741829","https://openalex.org/W2530322880","https://openalex.org/W1596801655"],"abstract_inverted_index":{"doi:":[0],"10.1093/database/baw118":[1],"In":[2],"the":[3,6,43,99,125,162,166],"above":[4],"manuscript,":[5,41],"caption":[7],"for":[8,58,68,98,111,124,133,165],"Figure":[9,15],"2":[10,16],"should":[11],"read":[12],"as":[13],"follows:":[14],":":[17],"Comparison":[18],"of":[19,54,86,103,129,143,147],"approaches":[20],"towards":[21,42],"heterogeneous":[22,44],"and":[23,27,77,82,93,101,127,136,152,161],"domain":[24,94],"specific":[25,95],"biomedical":[26,50,60,87,148,151],"scientific":[28,153],"images.":[29,154],"This":[30,155],"figure":[31],"highlights":[32],"different":[33,145],"approaches,":[34],"which":[35],"have":[36],"been":[37,158],"discussed":[38],"in":[39],"this":[40],"(":[45,96],"Integrating":[46],"image":[47,56,70,108],"data":[48],"into":[49],"text;":[51],"Automatic":[52,80],"segmentation":[53,102],"subfigure":[55],"panels":[57],"multimodal":[59],"document":[61,69],"retrieval;":[62],"Parsing":[63],"multi-panel":[64],"collaged":[65],"figures":[66,149],"method":[67],"understanding;":[71],"Analysing":[72,139],"axis":[73],"diagrams":[74],"with":[75],"nominal":[76],"discrete":[78],"dimensions;":[79],"categorization":[81],"spatial":[83],"distribution":[84],"analysis":[85,100,128],"images;":[88,106],"Yale":[89],"Image":[90],"Finder":[91],")":[92,150],"Framework":[97],"protein-protein":[104],"interactions":[105],"Management-based":[107],"processing":[109],"solutions":[110],"microscopy":[112],"data;":[113],"Ontology":[114],"based":[115],"information":[116],"retrieval":[117],"using":[118],"low-level":[119],"feature":[120],"extraction;":[121],"Mining":[122],"images":[123],"detection":[126],"gel":[130],"diagrams;":[131],"Bioimaging":[132],"complex":[134],"networks":[135],"pathways":[137],"analysis;":[138],"embedded":[140],"structural":[141],"properties":[142],"four":[144],"classes":[146],"has":[156],"now":[157],"corrected":[159],"online,":[160],"publisher":[163],"apologizes":[164],"error.":[167]},"counts_by_year":[{"year":2023,"cited_by_count":2},{"year":2022,"cited_by_count":1},{"year":2020,"cited_by_count":1},{"year":2019,"cited_by_count":1},{"year":2018,"cited_by_count":1},{"year":2017,"cited_by_count":1}],"updated_date":"2026-07-30T17:31:21.811387","created_date":"2025-10-10T00:00:00"}
