{"id":"https://openalex.org/W2376200357","doi":"https://doi.org/10.1093/database/baw072","title":"BioC-compatible full-text passage detection for protein\u2013protein interactions using extended dependency graph","display_name":"BioC-compatible full-text passage detection for protein\u2013protein interactions using extended dependency graph","publication_year":2016,"publication_date":"2016-01-01","ids":{"openalex":"https://openalex.org/W2376200357","doi":"https://doi.org/10.1093/database/baw072","mag":"2376200357","pmid":"https://pubmed.ncbi.nlm.nih.gov/27170286"},"language":"en","primary_location":{"id":"doi:10.1093/database/baw072","is_oa":true,"landing_page_url":"https://doi.org/10.1093/database/baw072","pdf_url":"https://academic.oup.com/database/article-pdf/doi/10.1093/database/baw072/17473941/baw072.pdf","source":{"id":"https://openalex.org/S4210201630","display_name":"Database","issn_l":"1758-0463","issn":["1758-0463"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311647","host_organization_name":"University of Oxford","host_organization_lineage":["https://openalex.org/P4310311647"],"host_organization_lineage_names":["University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Database","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://academic.oup.com/database/article-pdf/doi/10.1093/database/baw072/17473941/baw072.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5085113833","display_name":"Yifan Peng","orcid":"https://orcid.org/0000-0001-9309-8331"},"institutions":[{"id":"https://openalex.org/I86501945","display_name":"University of Delaware","ror":"https://ror.org/01sbq1a82","country_code":"US","type":"education","lineage":["https://openalex.org/I86501945"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Yifan Peng","raw_affiliation_strings":["Computer & Information Sciences, University of Delaware and yfpeng@udel.edu","Computer & Information Sciences, University of Delaware and"],"affiliations":[{"raw_affiliation_string":"Computer & Information Sciences, University of Delaware and yfpeng@udel.edu","institution_ids":[]},{"raw_affiliation_string":"Computer & Information Sciences, University of Delaware and","institution_ids":["https://openalex.org/I86501945"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5001355963","display_name":"Cecilia N. Arighi","orcid":"https://orcid.org/0000-0002-0803-4817"},"institutions":[{"id":"https://openalex.org/I86501945","display_name":"University of Delaware","ror":"https://ror.org/01sbq1a82","country_code":"US","type":"education","lineage":["https://openalex.org/I86501945"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Cecilia Arighi","raw_affiliation_strings":["Computer & Information Sciences, University of Delaware and Center for Bioinformatics & Computational Biology, University of Delaware, Newark, DE 19716, USA","Center for Bioinformatics & Computational Biology, University of Delaware, Newark, DE 19716, USA"],"affiliations":[{"raw_affiliation_string":"Computer & Information Sciences, University of Delaware and Center for Bioinformatics & Computational Biology, University of Delaware, Newark, DE 19716, USA","institution_ids":[]},{"raw_affiliation_string":"Center for Bioinformatics & Computational Biology, University of Delaware, Newark, DE 19716, USA","institution_ids":["https://openalex.org/I86501945"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5053761444","display_name":"Cathy Wu","orcid":"https://orcid.org/0000-0001-6379-8601"},"institutions":[{"id":"https://openalex.org/I86501945","display_name":"University of Delaware","ror":"https://ror.org/01sbq1a82","country_code":"US","type":"education","lineage":["https://openalex.org/I86501945"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Cathy H. Wu","raw_affiliation_strings":["Computer & Information Sciences, University of Delaware and Center for Bioinformatics & Computational Biology, University of Delaware, Newark, DE 19716, USA","Center for Bioinformatics & Computational Biology, University of Delaware, Newark, DE 19716, USA","Computer & Information Sciences, University of Delaware and"],"affiliations":[{"raw_affiliation_string":"Computer & Information Sciences, University of Delaware and Center for Bioinformatics & Computational Biology, University of Delaware, Newark, DE 19716, USA","institution_ids":[]},{"raw_affiliation_string":"Center for Bioinformatics & Computational Biology, University of Delaware, Newark, DE 19716, USA","institution_ids":["https://openalex.org/I86501945"]},{"raw_affiliation_string":"Computer & Information Sciences, University of Delaware and","institution_ids":["https://openalex.org/I86501945"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5027009667","display_name":"K. Vijay\u2010Shanker","orcid":"https://orcid.org/0000-0003-0958-3073"},"institutions":[{"id":"https://openalex.org/I86501945","display_name":"University of Delaware","ror":"https://ror.org/01sbq1a82","country_code":"US","type":"education","lineage":["https://openalex.org/I86501945"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"K. Vijay-Shanker","raw_affiliation_strings":["Computer & Information Sciences, University of Delaware and"],"affiliations":[{"raw_affiliation_string":"Computer & Information Sciences, University of Delaware and","institution_ids":["https://openalex.org/I86501945"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":4,"corresponding_author_ids":["https://openalex.org/A5085113833"],"corresponding_institution_ids":["https://openalex.org/I86501945"],"apc_list":{"value":1415,"currency":"GBP","value_usd":1735},"apc_paid":{"value":1415,"currency":"GBP","value_usd":1735},"fwci":1.0435,"has_fulltext":true,"cited_by_count":8,"citation_normalized_percentile":{"value":0.78256527,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":96},"biblio":{"volume":"2016","issue":null,"first_page":"baw072","last_page":"baw072"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10028","display_name":"Topic Modeling","score":0.9703999757766724,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10215","display_name":"Semantic Web and Ontologies","score":0.9678000211715698,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7941800355911255},{"id":"https://openalex.org/keywords/annotation","display_name":"Annotation","score":0.6558777689933777},{"id":"https://openalex.org/keywords/sentence","display_name":"Sentence","score":0.6179576516151428},{"id":"https://openalex.org/keywords/natural-language-processing","display_name":"Natural language processing","score":0.6012963652610779},{"id":"https://openalex.org/keywords/graph","display_name":"Graph","score":0.5537880659103394},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.512957751750946},{"id":"https://openalex.org/keywords/information-retrieval","display_name":"Information retrieval","score":0.5085464715957642},{"id":"https://openalex.org/keywords/generalizability-theory","display_name":"Generalizability theory","score":0.47662508487701416},{"id":"https://openalex.org/keywords/dependency","display_name":"Dependency (UML)","score":0.46820786595344543},{"id":"https://openalex.org/keywords/task","display_name":"Task (project management)","score":0.45207783579826355},{"id":"https://openalex.org/keywords/precision-and-recall","display_name":"Precision and recall","score":0.44330033659935},{"id":"https://openalex.org/keywords/dependency-graph","display_name":"Dependency graph","score":0.4413760006427765},{"id":"https://openalex.org/keywords/set","display_name":"Set (abstract data type)","score":0.44122904539108276},{"id":"https://openalex.org/keywords/pipeline","display_name":"Pipeline (software)","score":0.43614262342453003},{"id":"https://openalex.org/keywords/feature","display_name":"Feature (linguistics)","score":0.42998209595680237}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7941800355911255},{"id":"https://openalex.org/C2776321320","wikidata":"https://www.wikidata.org/wiki/Q857525","display_name":"Annotation","level":2,"score":0.6558777689933777},{"id":"https://openalex.org/C2777530160","wikidata":"https://www.wikidata.org/wiki/Q41796","display_name":"Sentence","level":2,"score":0.6179576516151428},{"id":"https://openalex.org/C204321447","wikidata":"https://www.wikidata.org/wiki/Q30642","display_name":"Natural language processing","level":1,"score":0.6012963652610779},{"id":"https://openalex.org/C132525143","wikidata":"https://www.wikidata.org/wiki/Q141488","display_name":"Graph","level":2,"score":0.5537880659103394},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.512957751750946},{"id":"https://openalex.org/C23123220","wikidata":"https://www.wikidata.org/wiki/Q816826","display_name":"Information retrieval","level":1,"score":0.5085464715957642},{"id":"https://openalex.org/C27158222","wikidata":"https://www.wikidata.org/wiki/Q5532422","display_name":"Generalizability theory","level":2,"score":0.47662508487701416},{"id":"https://openalex.org/C19768560","wikidata":"https://www.wikidata.org/wiki/Q320727","display_name":"Dependency (UML)","level":2,"score":0.46820786595344543},{"id":"https://openalex.org/C2780451532","wikidata":"https://www.wikidata.org/wiki/Q759676","display_name":"Task (project management)","level":2,"score":0.45207783579826355},{"id":"https://openalex.org/C81669768","wikidata":"https://www.wikidata.org/wiki/Q2359161","display_name":"Precision and recall","level":2,"score":0.44330033659935},{"id":"https://openalex.org/C16311509","wikidata":"https://www.wikidata.org/wiki/Q4148050","display_name":"Dependency graph","level":3,"score":0.4413760006427765},{"id":"https://openalex.org/C177264268","wikidata":"https://www.wikidata.org/wiki/Q1514741","display_name":"Set (abstract data type)","level":2,"score":0.44122904539108276},{"id":"https://openalex.org/C43521106","wikidata":"https://www.wikidata.org/wiki/Q2165493","display_name":"Pipeline (software)","level":2,"score":0.43614262342453003},{"id":"https://openalex.org/C2776401178","wikidata":"https://www.wikidata.org/wiki/Q12050496","display_name":"Feature (linguistics)","level":2,"score":0.42998209595680237},{"id":"https://openalex.org/C138885662","wikidata":"https://www.wikidata.org/wiki/Q5891","display_name":"Philosophy","level":0,"score":0.0},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.0},{"id":"https://openalex.org/C41895202","wikidata":"https://www.wikidata.org/wiki/Q8162","display_name":"Linguistics","level":1,"score":0.0},{"id":"https://openalex.org/C105795698","wikidata":"https://www.wikidata.org/wiki/Q12483","display_name":"Statistics","level":1,"score":0.0},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.0},{"id":"https://openalex.org/C80444323","wikidata":"https://www.wikidata.org/wiki/Q2878974","display_name":"Theoretical computer science","level":1,"score":0.0},{"id":"https://openalex.org/C162324750","wikidata":"https://www.wikidata.org/wiki/Q8134","display_name":"Economics","level":0,"score":0.0},{"id":"https://openalex.org/C187736073","wikidata":"https://www.wikidata.org/wiki/Q2920921","display_name":"Management","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D012660","descriptor_name":"Semantics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012660","descriptor_name":"Semantics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012660","descriptor_name":"Semantics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D057225","descriptor_name":"Data Mining","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D057225","descriptor_name":"Data Mining","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D057225","descriptor_name":"Data Mining","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D060066","descriptor_name":"Protein Interaction Maps","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D060066","descriptor_name":"Protein Interaction Maps","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D060066","descriptor_name":"Protein Interaction Maps","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true}],"locations_count":5,"locations":[{"id":"doi:10.1093/database/baw072","is_oa":true,"landing_page_url":"https://doi.org/10.1093/database/baw072","pdf_url":"https://academic.oup.com/database/article-pdf/doi/10.1093/database/baw072/17473941/baw072.pdf","source":{"id":"https://openalex.org/S4210201630","display_name":"Database","issn_l":"1758-0463","issn":["1758-0463"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311647","host_organization_name":"University of Oxford","host_organization_lineage":["https://openalex.org/P4310311647"],"host_organization_lineage_names":["University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Database","raw_type":"journal-article"},{"id":"pmid:27170286","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/27170286","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Database : the journal of biological databases and curation","raw_type":null},{"id":"pmh:oai:udspace.udel.edu:19716/21540","is_oa":true,"landing_page_url":"http://udspace.udel.edu/handle/19716/21540","pdf_url":null,"source":{"id":"https://openalex.org/S4377196565","display_name":"Library, Museums and Press - UDSpace (University of Delaware)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I86501945","host_organization_name":"University of Delaware","host_organization_lineage":["https://openalex.org/I86501945"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Database-the Journal of Biological Databases and Curation","raw_type":"Article"},{"id":"pmh:oai:europepmc.org:3881709","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/4915133","pdf_url":null,"source":{"id":"https://openalex.org/S4306400806","display_name":"Europe PMC (PubMed Central)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1303153112","host_organization_name":"European Bioinformatics Institute","host_organization_lineage":["https://openalex.org/I1303153112"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Text"},{"id":"pmh:oai:open-archive.highwire.org:databa:2016/0/baw072","is_oa":false,"landing_page_url":"http://database.oxfordjournals.org/cgi/content/short/2016/0/baw072","pdf_url":null,"source":{"id":"https://openalex.org/S4406923041","display_name":"HighWire Press Open Archive","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"TEXT"}],"best_oa_location":{"id":"doi:10.1093/database/baw072","is_oa":true,"landing_page_url":"https://doi.org/10.1093/database/baw072","pdf_url":"https://academic.oup.com/database/article-pdf/doi/10.1093/database/baw072/17473941/baw072.pdf","source":{"id":"https://openalex.org/S4210201630","display_name":"Database","issn_l":"1758-0463","issn":["1758-0463"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311647","host_organization_name":"University of Oxford","host_organization_lineage":["https://openalex.org/P4310311647"],"host_organization_lineage_names":["University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Database","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G2003949275","display_name":null,"funder_award_id":"DBI-1062520","funder_id":"https://openalex.org/F4320306076","funder_display_name":"National Science Foundation"},{"id":"https://openalex.org/G5870083451","display_name":"ABI Development: Integrative Bioinformatics for Knowledge Discovery of PTM Networks","funder_award_id":"1062520","funder_id":"https://openalex.org/F4320306076","funder_display_name":"National Science Foundation"},{"id":"https://openalex.org/G848032724","display_name":null,"funder_award_id":"Science","funder_id":"https://openalex.org/F4320306076","funder_display_name":"National Science Foundation"}],"funders":[{"id":"https://openalex.org/F4320306076","display_name":"National Science Foundation","ror":"https://ror.org/021nxhr62"}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2376200357.pdf","grobid_xml":"https://content.openalex.org/works/W2376200357.grobid-xml"},"referenced_works_count":21,"referenced_works":["https://openalex.org/W1604685658","https://openalex.org/W1629275429","https://openalex.org/W1974575979","https://openalex.org/W1986579413","https://openalex.org/W1996787131","https://openalex.org/W2003516452","https://openalex.org/W2064314529","https://openalex.org/W2104148262","https://openalex.org/W2108211831","https://openalex.org/W2125712079","https://openalex.org/W2127080518","https://openalex.org/W2148638118","https://openalex.org/W2152269015","https://openalex.org/W2166111585","https://openalex.org/W2166474856","https://openalex.org/W2189472871","https://openalex.org/W2251713149","https://openalex.org/W2307374598","https://openalex.org/W2404247930","https://openalex.org/W2509885322","https://openalex.org/W2740887992"],"related_works":["https://openalex.org/W2250721602","https://openalex.org/W2327631927","https://openalex.org/W2093568763","https://openalex.org/W69297589","https://openalex.org/W1985166372","https://openalex.org/W2003096546","https://openalex.org/W4289354592","https://openalex.org/W2430210575","https://openalex.org/W2165069859","https://openalex.org/W2099112646"],"abstract_inverted_index":{"There":[0],"has":[1],"been":[2],"a":[3,37,105,113,168,217],"large":[4],"growth":[5],"in":[6,31,46,102,122],"the":[7,32,47,52,55,58,65,73,123,139,146,152,156,176,193,206,209],"number":[8],"of":[9,17,22,57,79,93,116,170,178,189,200,208,225,233],"biomedical":[10],"publications":[11],"that":[12,84,95,142,164,197],"report":[13],"experimental":[14],"results.":[15],"Many":[16],"these":[18,160],"results":[19],"concern":[20],"detection":[21,177,229],"protein-protein":[23],"interactions":[24],"(PPI).":[25],"In":[26,172],"BioCreative":[27],"V,":[28],"we":[29,107,137,182,211],"participated":[30],"BioC":[33,53,147],"task":[34],"and":[35,125,162,186,195,230],"developed":[36],"PPI":[38,81,120,133,219,237],"system":[39,59,74,82,166],"to":[40,64,97,110,118,128,174],"detect":[41,129],"text":[42],"passages":[43,131,179],"with":[44,68,180],"PPIs":[45,154],"full-text":[48],"articles.":[49],"By":[50],"adopting":[51],"format,":[54],"output":[56],"can":[60],"be":[61],"seamlessly":[62],"added":[63],"biocuration":[66],"pipeline":[67],"little":[69],"effort":[70],"required":[71],"for":[72,132,145,159,227,235],"integration.":[75],"A":[76],"distinctive":[77],"feature":[78],"our":[80,165],"is":[83],"it":[85],"utilizes":[86],"extended":[87],"dependency":[88],"graph,":[89],"an":[90,198,223,231],"intermediate":[91],"level":[92],"representation":[94],"attempts":[96],"abstract":[98],"away":[99],"syntactic":[100],"variations":[101],"text.":[103],"As":[104],"result,":[106],"are":[108],"able":[109],"use":[111],"only":[112],"limited":[114],"set":[115],"rules":[117,127],"extract":[119],"pairs":[121],"sentences,":[124],"additional":[126,130],"pairs.":[134],"For":[135],"evaluation,":[136],"used":[138],"95":[140],"articles":[141,161],"were":[143],"provided":[144],"annotation":[148],"task.":[149],"We":[150,221],"retrieved":[151],"unique":[153,236],"from":[155,192],"BioGRID":[157],"database":[158],"show":[163,196],"achieves":[167],"recall":[169],"83.5%.":[171],"order":[173],"evaluate":[175,205],"PPIs,":[181],"further":[183],"annotated":[184],"Abstract":[185],"Results":[187],"sections":[188],"20":[190],"documents":[191],"dataset":[194],"f-value":[199,224,232],"80.5%":[201],"was":[202],"obtained.":[203],"To":[204],"generalizability":[207],"system,":[210],"also":[212],"conducted":[213],"experiments":[214],"on":[215],"AIMed,":[216],"well-known":[218],"corpus.":[220],"achieved":[222],"76.1%":[226],"sentence":[228],"64.7%":[234],"detection.Database":[238],"URL:":[239],"http://proteininformationresource.org/iprolink/corpora.":[240]},"counts_by_year":[{"year":2024,"cited_by_count":1},{"year":2020,"cited_by_count":1},{"year":2019,"cited_by_count":1},{"year":2018,"cited_by_count":1},{"year":2017,"cited_by_count":2},{"year":2016,"cited_by_count":2}],"updated_date":"2026-03-18T14:38:29.013473","created_date":"2025-10-10T00:00:00"}
