{"id":"https://openalex.org/W2319940456","doi":"https://doi.org/10.1093/database/baw023","title":"CSCdb: a cancer stem cells portal for markers, related genes and functional information","display_name":"CSCdb: a cancer stem cells portal for markers, related genes and functional information","publication_year":2016,"publication_date":"2016-01-01","ids":{"openalex":"https://openalex.org/W2319940456","doi":"https://doi.org/10.1093/database/baw023","mag":"2319940456","pmid":"https://pubmed.ncbi.nlm.nih.gov/26989154"},"language":"en","primary_location":{"id":"doi:10.1093/database/baw023","is_oa":true,"landing_page_url":"https://doi.org/10.1093/database/baw023","pdf_url":"https://academic.oup.com/database/article-pdf/doi/10.1093/database/baw023/17473083/baw023.pdf","source":{"id":"https://openalex.org/S4210201630","display_name":"Database","issn_l":"1758-0463","issn":["1758-0463"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311647","host_organization_name":"University of Oxford","host_organization_lineage":["https://openalex.org/P4310311647"],"host_organization_lineage_names":["University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Database","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://academic.oup.com/database/article-pdf/doi/10.1093/database/baw023/17473083/baw023.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5045434740","display_name":"Yi Shen","orcid":"https://orcid.org/0000-0002-1679-9238"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Yi Shen","raw_affiliation_strings":["School of Information Science and Technology"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Information Science and Technology","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5014238505","display_name":"Heming Yao","orcid":"https://orcid.org/0000-0001-9020-5330"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Heming Yao","raw_affiliation_strings":["School of Life Science"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Life Science","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100359729","display_name":"Ao Li","orcid":"https://orcid.org/0000-0001-9910-8967"},"institutions":[{"id":"https://openalex.org/I126520041","display_name":"University of Science and Technology of China","ror":"https://ror.org/04c4dkn09","country_code":"CN","type":"education","lineage":["https://openalex.org/I126520041","https://openalex.org/I19820366"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Ao Li","raw_affiliation_strings":["School of Information Science and Technology Centers for Biomedical Engineering, University of Science and Technology of China, Hefei, AH230027, China aoli@ustc.edu.cn","School of Information Science and Technology","Centers for Biomedical Engineering, University of Science and Technology of China, Hefei, AH230027, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Information Science and Technology Centers for Biomedical Engineering, University of Science and Technology of China, Hefei, AH230027, China aoli@ustc.edu.cn","institution_ids":["https://openalex.org/I126520041"]},{"raw_affiliation_string":"School of Information Science and Technology","institution_ids":[]},{"raw_affiliation_string":"Centers for Biomedical Engineering, University of Science and Technology of China, Hefei, AH230027, China","institution_ids":["https://openalex.org/I126520041"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5100376902","display_name":"Minghui Wang","orcid":"https://orcid.org/0000-0002-5788-894X"},"institutions":[{"id":"https://openalex.org/I126520041","display_name":"University of Science and Technology of China","ror":"https://ror.org/04c4dkn09","country_code":"CN","type":"education","lineage":["https://openalex.org/I126520041","https://openalex.org/I19820366"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Minghui Wang","raw_affiliation_strings":["School of Information Science and Technology Centers for Biomedical Engineering, University of Science and Technology of China, Hefei, AH230027, China","School of Information Science and Technology","Centers for Biomedical Engineering, University of Science and Technology of China, Hefei, AH230027, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Information Science and Technology Centers for Biomedical Engineering, University of Science and Technology of China, Hefei, AH230027, China","institution_ids":["https://openalex.org/I126520041"]},{"raw_affiliation_string":"School of Information Science and Technology","institution_ids":[]},{"raw_affiliation_string":"Centers for Biomedical Engineering, University of Science and Technology of China, Hefei, AH230027, China","institution_ids":["https://openalex.org/I126520041"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":1,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":{"value":1415,"currency":"GBP","value_usd":1735},"apc_paid":{"value":1415,"currency":"GBP","value_usd":1735},"fwci":0.3417,"has_fulltext":true,"cited_by_count":20,"citation_normalized_percentile":{"value":0.67274009,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":91,"max":98},"biblio":{"volume":"2016","issue":null,"first_page":"baw023","last_page":"baw023"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9976000189781189,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9976000189781189,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10885","display_name":"Gene expression and cancer classification","score":0.9954000115394592,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.995199978351593,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/carcinogenesis","display_name":"Carcinogenesis","score":0.694647490978241},{"id":"https://openalex.org/keywords/cancer-stem-cell","display_name":"Cancer stem cell","score":0.6162059903144836},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.5949468612670898},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.5374529957771301},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.5061852335929871},{"id":"https://openalex.org/keywords/stem-cell","display_name":"Stem cell","score":0.379210889339447},{"id":"https://openalex.org/keywords/database","display_name":"Database","score":0.34809568524360657},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.2533191442489624},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.20646154880523682}],"concepts":[{"id":"https://openalex.org/C555283112","wikidata":"https://www.wikidata.org/wiki/Q1637543","display_name":"Carcinogenesis","level":3,"score":0.694647490978241},{"id":"https://openalex.org/C55427017","wikidata":"https://www.wikidata.org/wiki/Q1638475","display_name":"Cancer stem cell","level":3,"score":0.6162059903144836},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.5949468612670898},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.5374529957771301},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.5061852335929871},{"id":"https://openalex.org/C28328180","wikidata":"https://www.wikidata.org/wiki/Q48196","display_name":"Stem cell","level":2,"score":0.379210889339447},{"id":"https://openalex.org/C77088390","wikidata":"https://www.wikidata.org/wiki/Q8513","display_name":"Database","level":1,"score":0.34809568524360657},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.2533191442489624},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.20646154880523682}],"mesh":[{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014408","descriptor_name":"Biomarkers, Tumor","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D014408","descriptor_name":"Biomarkers, Tumor","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D014408","descriptor_name":"Biomarkers, Tumor","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D014411","descriptor_name":"Neoplastic Stem Cells","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D014411","descriptor_name":"Neoplastic Stem Cells","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D014411","descriptor_name":"Neoplastic Stem Cells","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D052138","descriptor_name":"Genes, Neoplasm","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D052138","descriptor_name":"Genes, Neoplasm","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D052138","descriptor_name":"Genes, Neoplasm","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true}],"locations_count":4,"locations":[{"id":"doi:10.1093/database/baw023","is_oa":true,"landing_page_url":"https://doi.org/10.1093/database/baw023","pdf_url":"https://academic.oup.com/database/article-pdf/doi/10.1093/database/baw023/17473083/baw023.pdf","source":{"id":"https://openalex.org/S4210201630","display_name":"Database","issn_l":"1758-0463","issn":["1758-0463"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311647","host_organization_name":"University of Oxford","host_organization_lineage":["https://openalex.org/P4310311647"],"host_organization_lineage_names":["University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Database","raw_type":"journal-article"},{"id":"pmid:26989154","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/26989154","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Database : the journal of biological databases and curation","raw_type":null},{"id":"pmh:oai:europepmc.org:3767192","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/4795926","pdf_url":null,"source":{"id":"https://openalex.org/S4306400806","display_name":"Europe PMC (PubMed Central)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1303153112","host_organization_name":"European Bioinformatics Institute","host_organization_lineage":["https://openalex.org/I1303153112"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Text"},{"id":"pmh:oai:open-archive.highwire.org:databa:2016/0/baw023","is_oa":false,"landing_page_url":"http://database.oxfordjournals.org/cgi/content/short/2016/0/baw023","pdf_url":null,"source":{"id":"https://openalex.org/S4406923041","display_name":"HighWire Press Open Archive","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"TEXT"}],"best_oa_location":{"id":"doi:10.1093/database/baw023","is_oa":true,"landing_page_url":"https://doi.org/10.1093/database/baw023","pdf_url":"https://academic.oup.com/database/article-pdf/doi/10.1093/database/baw023/17473083/baw023.pdf","source":{"id":"https://openalex.org/S4210201630","display_name":"Database","issn_l":"1758-0463","issn":["1758-0463"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311647","host_organization_name":"University of Oxford","host_organization_lineage":["https://openalex.org/P4310311647"],"host_organization_lineage_names":["University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Database","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G3265657446","display_name":null,"funder_award_id":"No. 61471331","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G4199516844","display_name":"\u9762\u5411\u65b0\u4e00\u4ee3\u6d4b\u5e8f\u7684\u764c\u75c7\u62f7\u8d1d\u6570\u5f02\u5e38\u68c0\u6d4b\u53ca\u5176\u5173\u952e\u53d8\u5f02\u7684\u8ba1\u7b97\u53d1\u73b0\u7814\u7a76","funder_award_id":"61571414","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G7348074014","display_name":"\u78f7\u9178\u5316\u76f8\u5173\u7684\u86cb\u767d\u8d28\u7ffb\u8bd1\u540e\u4fee\u9970Crosstalk\u53ca\u6fc0\u9176\u7684\u8ba1\u7b97\u8bc6\u522b\u65b9\u6cd5\u548c\u5206\u6790\u7814\u7a76","funder_award_id":"61471331","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"}],"funders":[{"id":"https://openalex.org/F4320321001","display_name":"National Natural Science Foundation of China","ror":"https://ror.org/01h0zpd94"}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2319940456.pdf","grobid_xml":"https://content.openalex.org/works/W2319940456.grobid-xml"},"referenced_works_count":24,"referenced_works":["https://openalex.org/W1858673582","https://openalex.org/W1989277387","https://openalex.org/W1989773675","https://openalex.org/W1998196049","https://openalex.org/W2002013266","https://openalex.org/W2011586304","https://openalex.org/W2016106370","https://openalex.org/W2035375527","https://openalex.org/W2042160423","https://openalex.org/W2075319133","https://openalex.org/W2075406901","https://openalex.org/W2105924489","https://openalex.org/W2107249189","https://openalex.org/W2146980885","https://openalex.org/W2146994504","https://openalex.org/W2148064150","https://openalex.org/W2153636826","https://openalex.org/W2153745983","https://openalex.org/W2159607376","https://openalex.org/W2165477362","https://openalex.org/W2177605184","https://openalex.org/W2605068739","https://openalex.org/W4212920271","https://openalex.org/W4237335579"],"related_works":["https://openalex.org/W1967821671","https://openalex.org/W3030842346","https://openalex.org/W2137934173","https://openalex.org/W1969795570","https://openalex.org/W2125789691","https://openalex.org/W2063781606","https://openalex.org/W4290263427","https://openalex.org/W2063657731","https://openalex.org/W2471182339","https://openalex.org/W2150479858"],"abstract_inverted_index":{"Cancer":[0],"stem":[1],"cells":[2],"(CSCs),":[3],"which":[4,92,171,212],"have":[5,85,123],"the":[6,25,35,38,55,70,104,129,168,194],"ability":[7],"to":[8,33,69,77,126,196],"self-renew":[9],"and":[10,41,59,98,134,188,220],"differentiate":[11],"into":[12,193],"various":[13],"tumor":[14,22,46],"cell":[15],"types,":[16],"are":[17,191],"a":[18,60,88,205,223],"special":[19],"class":[20],"of":[21,57,63,72,119,132,146,167],"cells.":[23],"Characterizing":[24],"genes":[26,121,137,219],"involved":[27],"in":[28,54,103,128,215],"CSCs":[29,58,78,89,133,209],"regulation":[30,131],"is":[31,79],"fundamental":[32],"understand":[34],"mechanisms":[36],"underlying":[37],"biological":[39],"process":[40],"develop":[42],"treatment":[43],"methods":[44],"for":[45,142,208,226],"therapy.":[47],"Recently,":[48],"much":[49],"effort":[50],"has":[51,65],"been":[52,66,124],"expended":[53],"study":[56],"large":[61],"amount":[62],"data":[64],"generated.":[67],"However,":[68],"best":[71],"our":[73],"knowledge,":[74],"database":[75,90],"dedicated":[76],"not":[80],"available":[81],"until":[82],"now.":[83],"We":[84],"thus":[86],"developed":[87],"(CSCdb),":[91],"includes":[93],"marker":[94,136],"genes,":[95,170],"CSCs-related":[96,156,218],"genes/microRNAs":[97],"functional":[99,130],"annotations.":[100],"The":[101,114,148],"information":[102,118,187,200],"CSCdb":[105,115,149,195,203],"was":[106],"manual":[107],"collected":[108],"from":[109],"about":[110,154],"13":[111,155],"000":[112],"articles.":[113],"provides":[116,151,204],"detailed":[117],"1769":[120],"that":[122,138],"reported":[125],"participate":[127],"74":[135],"can":[139],"be":[140,222],"used":[141],"identification":[143],"or":[144],"isolation":[145],"CSCs.":[147],"also":[150],"9475":[152],"annotations":[153],"functions,":[157],"such":[158],"as":[159],"oncogenesis,":[160],"radio":[161],"resistance,":[162],"tumorigenesis,":[163],"differentiation,":[164],"etc.":[165],"Annotations":[166],"identified":[169],"include":[172],"protein":[173],"function":[174],"description,":[175],"post-transcription":[176],"modification":[177],"information,":[178],"related":[179],"literature,":[180],"Gene":[181],"Ontology":[182],"(GO),":[183],"protein-protein":[184],"interaction":[185],"(PPI)":[186],"regulatory":[189],"relationships,":[190],"integrated":[192],"help":[197],"users":[198],"get":[199],"more":[201],"easily.":[202],"comprehensive":[206],"resource":[207],"research":[210],"work,":[211],"would":[213,221],"assist":[214],"finding":[216],"new":[217],"useful":[224],"tool":[225],"biologists.":[227],"Database":[228],"URL:":[229],"http://bioinformatics.ustc.edu.cn/cscdb.":[230]},"counts_by_year":[{"year":2025,"cited_by_count":1},{"year":2024,"cited_by_count":3},{"year":2023,"cited_by_count":2},{"year":2022,"cited_by_count":2},{"year":2021,"cited_by_count":6},{"year":2020,"cited_by_count":4},{"year":2019,"cited_by_count":2}],"updated_date":"2026-01-13T01:12:25.745995","created_date":"2025-10-10T00:00:00"}
