{"id":"https://openalex.org/W1864420137","doi":"https://doi.org/10.1093/database/bav102","title":"MtiBase: a database for decoding microRNA target sites located within CDS and 5\u2032UTR regions from CLIP-Seq and expression profile datasets","display_name":"MtiBase: a database for decoding microRNA target sites located within CDS and 5\u2032UTR regions from CLIP-Seq and expression profile datasets","publication_year":2015,"publication_date":"2015-10-01","ids":{"openalex":"https://openalex.org/W1864420137","doi":"https://doi.org/10.1093/database/bav102","mag":"1864420137","pmid":"https://pubmed.ncbi.nlm.nih.gov/26490638"},"language":"en","primary_location":{"id":"doi:10.1093/database/bav102","is_oa":true,"landing_page_url":"https://doi.org/10.1093/database/bav102","pdf_url":"https://academic.oup.com/database/article-pdf/doi/10.1093/database/bav102/16976375/bav102.pdf","source":{"id":"https://openalex.org/S4210201630","display_name":"Database","issn_l":"1758-0463","issn":["1758-0463"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311647","host_organization_name":"University of Oxford","host_organization_lineage":["https://openalex.org/P4310311647"],"host_organization_lineage_names":["University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Database","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://academic.oup.com/database/article-pdf/doi/10.1093/database/bav102/16976375/bav102.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":null,"display_name":"Zhi-Wei Guo","orcid":null},"institutions":[{"id":"https://openalex.org/I1327237609","display_name":"Ministry of Education of the People's Republic of China","ror":"https://ror.org/01mv9t934","country_code":"CN","type":"government","lineage":["https://openalex.org/I1327237609","https://openalex.org/I4210127390"]},{"id":"https://openalex.org/I190087913","display_name":"Biocon (Switzerland)","ror":"https://ror.org/049h4jd15","country_code":"CH","type":"company","lineage":["https://openalex.org/I190087913","https://openalex.org/I4210143327"]}],"countries":["CH","CN"],"is_corresponding":false,"raw_author_name":"Zhi-Wei Guo","raw_affiliation_strings":["Key Laboratory of Gene Engineering of the Ministry of Education, State Key Laboratory of Biocontrol","Key Laboratory of Gene Engineering of the Ministry of Education, State Key Laboratory of Biocontrol,"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Key Laboratory of Gene Engineering of the Ministry of Education, State Key Laboratory of Biocontrol","institution_ids":["https://openalex.org/I1327237609"]},{"raw_affiliation_string":"Key Laboratory of Gene Engineering of the Ministry of Education, State Key Laboratory of Biocontrol,","institution_ids":["https://openalex.org/I1327237609","https://openalex.org/I190087913"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5090959358","display_name":"Chen Xie","orcid":"https://orcid.org/0000-0002-9337-9763"},"institutions":[{"id":"https://openalex.org/I157773358","display_name":"Sun Yat-sen University","ror":"https://ror.org/0064kty71","country_code":"CN","type":"education","lineage":["https://openalex.org/I157773358"]},{"id":"https://openalex.org/I4210146956","display_name":"Third Affiliated Hospital of Sun Yat-sen University","ror":"https://ror.org/04tm3k558","country_code":"CN","type":"healthcare","lineage":["https://openalex.org/I4210146956"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Chen Xie","raw_affiliation_strings":["Key Laboratory of Liver Disease of Guangdong Province, The Third Affiliated Hospital, Sun Yat-Sen University, Guangzhou, People's Republic of China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Key Laboratory of Liver Disease of Guangdong Province, The Third Affiliated Hospital, Sun Yat-Sen University, Guangzhou, People's Republic of China","institution_ids":["https://openalex.org/I4210146956","https://openalex.org/I157773358"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100706424","display_name":"Jian\u2010Rong Yang","orcid":"https://orcid.org/0000-0002-7807-9455"},"institutions":[{"id":"https://openalex.org/I27837315","display_name":"University of Michigan","ror":"https://ror.org/00jmfr291","country_code":"US","type":"education","lineage":["https://openalex.org/I27837315"]},{"id":"https://openalex.org/I4210114506","display_name":"Ministry of Education","ror":"https://ror.org/01p262204","country_code":"KR","type":"government","lineage":["https://openalex.org/I2801339556","https://openalex.org/I4210114506"]}],"countries":["KR","US"],"is_corresponding":false,"raw_author_name":"Jian-Rong Yang","raw_affiliation_strings":["Department of Ecology and Evolutionary Biology, University of Michigan, Ann Arbor, MI, USA and","Key Laboratory of Gene Engineering of the Ministry of Education, State Key Laboratory of Biocontrol, yangjh7@mail.sysu.edu.cn"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Ecology and Evolutionary Biology, University of Michigan, Ann Arbor, MI, USA and","institution_ids":["https://openalex.org/I27837315"]},{"raw_affiliation_string":"Key Laboratory of Gene Engineering of the Ministry of Education, State Key Laboratory of Biocontrol, yangjh7@mail.sysu.edu.cn","institution_ids":["https://openalex.org/I4210114506"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5101576584","display_name":"Junhao Li","orcid":"https://orcid.org/0000-0001-6784-3780"},"institutions":[{"id":"https://openalex.org/I1327237609","display_name":"Ministry of Education of the People's Republic of China","ror":"https://ror.org/01mv9t934","country_code":"CN","type":"government","lineage":["https://openalex.org/I1327237609","https://openalex.org/I4210127390"]},{"id":"https://openalex.org/I190087913","display_name":"Biocon (Switzerland)","ror":"https://ror.org/049h4jd15","country_code":"CH","type":"company","lineage":["https://openalex.org/I190087913","https://openalex.org/I4210143327"]},{"id":"https://openalex.org/I27837315","display_name":"University of Michigan","ror":"https://ror.org/00jmfr291","country_code":"US","type":"education","lineage":["https://openalex.org/I27837315"]},{"id":"https://openalex.org/I4210114506","display_name":"Ministry of Education","ror":"https://ror.org/01p262204","country_code":"KR","type":"government","lineage":["https://openalex.org/I2801339556","https://openalex.org/I4210114506"]}],"countries":["CH","CN","KR","US"],"is_corresponding":true,"raw_author_name":"Jian-Rong Yang","raw_affiliation_strings":["Department of Ecology and Evolutionary Biology, University of Michigan, Ann Arbor, MI, USA and","Key Laboratory of Gene Engineering of the Ministry of Education, State Key Laboratory of Biocontrol, yangjh7@mail.sysu.edu.cn","Key Laboratory of Gene Engineering of the Ministry of Education, State Key Laboratory of Biocontrol,"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Ecology and Evolutionary Biology, University of Michigan, Ann Arbor, MI, USA and","institution_ids":["https://openalex.org/I27837315"]},{"raw_affiliation_string":"Key Laboratory of Gene Engineering of the Ministry of Education, State Key Laboratory of Biocontrol, yangjh7@mail.sysu.edu.cn","institution_ids":["https://openalex.org/I4210114506"]},{"raw_affiliation_string":"Key Laboratory of Gene Engineering of the Ministry of Education, State Key Laboratory of Biocontrol,","institution_ids":["https://openalex.org/I1327237609","https://openalex.org/I190087913"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5101882638","display_name":"Jianhua Yang","orcid":"https://orcid.org/0000-0002-7954-1365"},"institutions":[{"id":"https://openalex.org/I1327237609","display_name":"Ministry of Education of the People's Republic of China","ror":"https://ror.org/01mv9t934","country_code":"CN","type":"government","lineage":["https://openalex.org/I1327237609","https://openalex.org/I4210127390"]},{"id":"https://openalex.org/I190087913","display_name":"Biocon (Switzerland)","ror":"https://ror.org/049h4jd15","country_code":"CH","type":"company","lineage":["https://openalex.org/I190087913","https://openalex.org/I4210143327"]}],"countries":["CH","CN"],"is_corresponding":false,"raw_author_name":"Jun-Hao Li","raw_affiliation_strings":["Key Laboratory of Gene Engineering of the Ministry of Education, State Key Laboratory of Biocontrol","Key Laboratory of Gene Engineering of the Ministry of Education, State Key Laboratory of Biocontrol,"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Key Laboratory of Gene Engineering of the Ministry of Education, State Key Laboratory of Biocontrol","institution_ids":["https://openalex.org/I1327237609"]},{"raw_affiliation_string":"Key Laboratory of Gene Engineering of the Ministry of Education, State Key Laboratory of Biocontrol,","institution_ids":["https://openalex.org/I1327237609","https://openalex.org/I190087913"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5105024780","display_name":"Limin Zheng","orcid":"https://orcid.org/0000-0002-8281-1450"},"institutions":[{"id":"https://openalex.org/I157773358","display_name":"Sun Yat-sen University","ror":"https://ror.org/0064kty71","country_code":"CN","type":"education","lineage":["https://openalex.org/I157773358"]},{"id":"https://openalex.org/I27837315","display_name":"University of Michigan","ror":"https://ror.org/00jmfr291","country_code":"US","type":"education","lineage":["https://openalex.org/I27837315"]},{"id":"https://openalex.org/I4210114506","display_name":"Ministry of Education","ror":"https://ror.org/01p262204","country_code":"KR","type":"government","lineage":["https://openalex.org/I2801339556","https://openalex.org/I4210114506"]},{"id":"https://openalex.org/I4391768007","display_name":"State Key Laboratory of Oncology in South China","ror":"https://ror.org/04dn2ax39","country_code":null,"type":"facility","lineage":["https://openalex.org/I157773358","https://openalex.org/I4391768007"]}],"countries":["CN","KR","US"],"is_corresponding":true,"raw_author_name":"Jian-Hua Yang","raw_affiliation_strings":["Department of Ecology and Evolutionary Biology, University of Michigan, Ann Arbor, MI, USA and","Key Laboratory of Gene Engineering of the Ministry of Education, State Key Laboratory of Biocontrol, yangjh7@mail.sysu.edu.cn","4Collaborative Innovation Center for Cancer Medicine, Sun Yat-sen University Cancer Center, State Key Laboratory of Oncology in South China, Guangzhou, P. R. China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Ecology and Evolutionary Biology, University of Michigan, Ann Arbor, MI, USA and","institution_ids":["https://openalex.org/I27837315"]},{"raw_affiliation_string":"Key Laboratory of Gene Engineering of the Ministry of Education, State Key Laboratory of Biocontrol, yangjh7@mail.sysu.edu.cn","institution_ids":["https://openalex.org/I4210114506"]},{"raw_affiliation_string":"4Collaborative Innovation Center for Cancer Medicine, Sun Yat-sen University Cancer Center, State Key Laboratory of Oncology in South China, Guangzhou, P. R. China","institution_ids":["https://openalex.org/I157773358","https://openalex.org/I4391768007"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5101882638","display_name":"Jianhua Yang","orcid":"https://orcid.org/0000-0002-7954-1365"},"institutions":[{"id":"https://openalex.org/I27837315","display_name":"University of Michigan","ror":"https://ror.org/00jmfr291","country_code":"US","type":"education","lineage":["https://openalex.org/I27837315"]},{"id":"https://openalex.org/I4210114506","display_name":"Ministry of Education","ror":"https://ror.org/01p262204","country_code":"KR","type":"government","lineage":["https://openalex.org/I2801339556","https://openalex.org/I4210114506"]}],"countries":["KR","US"],"is_corresponding":false,"raw_author_name":"Jian-Hua Yang","raw_affiliation_strings":["Department of Ecology and Evolutionary Biology, University of Michigan, Ann Arbor, MI, USA and","Key Laboratory of Gene Engineering of the Ministry of Education, State Key Laboratory of Biocontrol, yangjh7@mail.sysu.edu.cn"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Ecology and Evolutionary Biology, University of Michigan, Ann Arbor, MI, USA and","institution_ids":["https://openalex.org/I27837315"]},{"raw_affiliation_string":"Key Laboratory of Gene Engineering of the Ministry of Education, State Key Laboratory of Biocontrol, yangjh7@mail.sysu.edu.cn","institution_ids":["https://openalex.org/I4210114506"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5105024780","display_name":"Limin Zheng","orcid":"https://orcid.org/0000-0002-8281-1450"},"institutions":[{"id":"https://openalex.org/I157773358","display_name":"Sun Yat-sen University","ror":"https://ror.org/0064kty71","country_code":"CN","type":"education","lineage":["https://openalex.org/I157773358"]},{"id":"https://openalex.org/I4210146711","display_name":"Sun Yat-sen University Cancer Center","ror":"https://ror.org/0400g8r85","country_code":"CN","type":"healthcare","lineage":["https://openalex.org/I4210146711"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Limin Zheng","raw_affiliation_strings":["Key Laboratory of Gene Engineering of the Ministry of Education, State Key Laboratory of Biocontrol, Collaborative Innovation Center for Cancer Medicine, Sun Yat-sen University Cancer Center, State Key Laboratory of Oncology in South China, Guangzhou, P. R. China yangjh7@mail.sysu.edu.cn"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Key Laboratory of Gene Engineering of the Ministry of Education, State Key Laboratory of Biocontrol, Collaborative Innovation Center for Cancer Medicine, Sun Yat-sen University Cancer Center, State Key Laboratory of Oncology in South China, Guangzhou, P. R. China yangjh7@mail.sysu.edu.cn","institution_ids":["https://openalex.org/I157773358","https://openalex.org/I4210146711"]}]}],"institutions":[],"countries_distinct_count":4,"institutions_distinct_count":8,"corresponding_author_ids":["https://openalex.org/A5101576584","https://openalex.org/A5105024780"],"corresponding_institution_ids":["https://openalex.org/I1327237609","https://openalex.org/I157773358","https://openalex.org/I190087913","https://openalex.org/I27837315","https://openalex.org/I4210114506","https://openalex.org/I4210146711","https://openalex.org/I4391768007"],"apc_list":{"value":1415,"currency":"GBP","value_usd":1735},"apc_paid":{"value":1415,"currency":"GBP","value_usd":1735},"fwci":1.6567,"has_fulltext":false,"cited_by_count":28,"citation_normalized_percentile":{"value":0.83356022,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":90,"max":98},"biblio":{"volume":"2015","issue":null,"first_page":"bav102","last_page":"bav102"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10604","display_name":"RNA Research and Splicing","score":1.0,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10604","display_name":"RNA Research and Splicing","score":1.0,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10062","display_name":"MicroRNA in disease regulation","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1306","display_name":"Cancer Research"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11482","display_name":"RNA modifications and cancer","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/microrna","display_name":"microRNA","score":0.7601364850997925},{"id":"https://openalex.org/keywords/untranslated-region","display_name":"Untranslated region","score":0.7184159755706787},{"id":"https://openalex.org/keywords/translation","display_name":"Translation (biology)","score":0.6478256583213806},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.5816502571105957},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.5379140973091125},{"id":"https://openalex.org/keywords/three-prime-untranslated-region","display_name":"Three prime untranslated region","score":0.5336789488792419},{"id":"https://openalex.org/keywords/coding-region","display_name":"Coding region","score":0.48696932196617126},{"id":"https://openalex.org/keywords/messenger-rna","display_name":"Messenger RNA","score":0.4782397150993347},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.4549938142299652},{"id":"https://openalex.org/keywords/gene-expression","display_name":"Gene expression","score":0.4246985912322998},{"id":"https://openalex.org/keywords/regulation-of-gene-expression","display_name":"Regulation of gene expression","score":0.41045325994491577},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.39533841609954834}],"concepts":[{"id":"https://openalex.org/C145059251","wikidata":"https://www.wikidata.org/wiki/Q310899","display_name":"microRNA","level":3,"score":0.7601364850997925},{"id":"https://openalex.org/C89604277","wikidata":"https://www.wikidata.org/wiki/Q424345","display_name":"Untranslated region","level":4,"score":0.7184159755706787},{"id":"https://openalex.org/C149364088","wikidata":"https://www.wikidata.org/wiki/Q185917","display_name":"Translation (biology)","level":4,"score":0.6478256583213806},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.5816502571105957},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.5379140973091125},{"id":"https://openalex.org/C22667442","wikidata":"https://www.wikidata.org/wiki/Q3272830","display_name":"Three prime untranslated region","level":5,"score":0.5336789488792419},{"id":"https://openalex.org/C91779695","wikidata":"https://www.wikidata.org/wiki/Q3780824","display_name":"Coding region","level":3,"score":0.48696932196617126},{"id":"https://openalex.org/C105580179","wikidata":"https://www.wikidata.org/wiki/Q188928","display_name":"Messenger RNA","level":3,"score":0.4782397150993347},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.4549938142299652},{"id":"https://openalex.org/C150194340","wikidata":"https://www.wikidata.org/wiki/Q26972","display_name":"Gene expression","level":3,"score":0.4246985912322998},{"id":"https://openalex.org/C165864922","wikidata":"https://www.wikidata.org/wiki/Q411391","display_name":"Regulation of gene expression","level":3,"score":0.41045325994491577},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.39533841609954834}],"mesh":[{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D005786","descriptor_name":"Gene Expression Regulation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D005786","descriptor_name":"Gene Expression Regulation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D005786","descriptor_name":"Gene Expression Regulation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D013223","descriptor_name":"Statistics as Topic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D013223","descriptor_name":"Statistics as Topic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D013223","descriptor_name":"Statistics as Topic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016366","descriptor_name":"Open Reading Frames","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D016366","descriptor_name":"Open Reading Frames","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D016366","descriptor_name":"Open Reading Frames","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D017423","descriptor_name":"Sequence Analysis, RNA","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D017423","descriptor_name":"Sequence Analysis, RNA","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D017423","descriptor_name":"Sequence Analysis, RNA","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020121","descriptor_name":"5' Untranslated Regions","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D020121","descriptor_name":"5' Untranslated Regions","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D020121","descriptor_name":"5' Untranslated Regions","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D020641","descriptor_name":"Polymorphism, Single Nucleotide","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D020641","descriptor_name":"Polymorphism, Single Nucleotide","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D020641","descriptor_name":"Polymorphism, Single Nucleotide","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D020869","descriptor_name":"Gene Expression Profiling","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D020869","descriptor_name":"Gene Expression Profiling","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D020869","descriptor_name":"Gene Expression Profiling","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030561","descriptor_name":"Databases, Nucleic Acid","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030561","descriptor_name":"Databases, Nucleic Acid","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030561","descriptor_name":"Databases, Nucleic Acid","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D035683","descriptor_name":"MicroRNAs","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D035683","descriptor_name":"MicroRNAs","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D035683","descriptor_name":"MicroRNAs","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D051379","descriptor_name":"Mice","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D051379","descriptor_name":"Mice","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D051379","descriptor_name":"Mice","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D058977","descriptor_name":"Molecular Sequence Annotation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D058977","descriptor_name":"Molecular Sequence Annotation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D058977","descriptor_name":"Molecular Sequence Annotation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":3,"locations":[{"id":"doi:10.1093/database/bav102","is_oa":true,"landing_page_url":"https://doi.org/10.1093/database/bav102","pdf_url":"https://academic.oup.com/database/article-pdf/doi/10.1093/database/bav102/16976375/bav102.pdf","source":{"id":"https://openalex.org/S4210201630","display_name":"Database","issn_l":"1758-0463","issn":["1758-0463"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311647","host_organization_name":"University of Oxford","host_organization_lineage":["https://openalex.org/P4310311647"],"host_organization_lineage_names":["University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Database","raw_type":"journal-article"},{"id":"pmid:26490638","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/26490638","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Database : the journal of biological databases and curation","raw_type":null},{"id":"pmh:oai:europepmc.org:3589454","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/4614282","pdf_url":null,"source":{"id":"https://openalex.org/S4306400806","display_name":"Europe PMC (PubMed Central)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1303153112","host_organization_name":"European Bioinformatics Institute","host_organization_lineage":["https://openalex.org/I1303153112"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1093/database/bav102","is_oa":true,"landing_page_url":"https://doi.org/10.1093/database/bav102","pdf_url":"https://academic.oup.com/database/article-pdf/doi/10.1093/database/bav102/16976375/bav102.pdf","source":{"id":"https://openalex.org/S4210201630","display_name":"Database","issn_l":"1758-0463","issn":["1758-0463"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311647","host_organization_name":"University of Oxford","host_organization_lineage":["https://openalex.org/P4310311647"],"host_organization_lineage_names":["University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Database","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":46,"referenced_works":["https://openalex.org/W1973804607","https://openalex.org/W1978134915","https://openalex.org/W1992461587","https://openalex.org/W1998819524","https://openalex.org/W2007725123","https://openalex.org/W2020541351","https://openalex.org/W2038320333","https://openalex.org/W2041233542","https://openalex.org/W2046314136","https://openalex.org/W2050159684","https://openalex.org/W2053003053","https://openalex.org/W2053490054","https://openalex.org/W2065566217","https://openalex.org/W2077327925","https://openalex.org/W2081973099","https://openalex.org/W2086609093","https://openalex.org/W2094253263","https://openalex.org/W2100239923","https://openalex.org/W2101117089","https://openalex.org/W2104806799","https://openalex.org/W2108366237","https://openalex.org/W2113801629","https://openalex.org/W2116868464","https://openalex.org/W2117977572","https://openalex.org/W2119034410","https://openalex.org/W2120456037","https://openalex.org/W2124985265","https://openalex.org/W2133658633","https://openalex.org/W2134118500","https://openalex.org/W2134271628","https://openalex.org/W2145191876","https://openalex.org/W2147358001","https://openalex.org/W2149146453","https://openalex.org/W2153234291","https://openalex.org/W2154431984","https://openalex.org/W2154688988","https://openalex.org/W2159793493","https://openalex.org/W2160387598","https://openalex.org/W2162002150","https://openalex.org/W2162674813","https://openalex.org/W2165064122","https://openalex.org/W2167534419","https://openalex.org/W2171398108","https://openalex.org/W2414035669","https://openalex.org/W4230266413","https://openalex.org/W4237011200"],"related_works":["https://openalex.org/W2130669936","https://openalex.org/W2004500421","https://openalex.org/W2210531927","https://openalex.org/W2006329394","https://openalex.org/W80584116","https://openalex.org/W1995847322","https://openalex.org/W2019107363","https://openalex.org/W2068985481","https://openalex.org/W2067388411","https://openalex.org/W2725195091"],"abstract_inverted_index":{"MicroRNAs":[0],"(miRNAs)":[1],"play":[2],"an":[3],"important":[4],"role":[5],"in":[6,23,168,196],"the":[7,24,51,70,136,147,171,176],"regulation":[8],"of":[9,29,57,73,139,173,178,194],"gene":[10,151],"expression.":[11],"Previous":[12],"studies":[13,193],"on":[14,19,93,141,175],"miRNA":[15,77,110,130,179],"functions":[16,177],"mainly":[17],"focused":[18],"their":[20,90],"target":[21,78,111,131,180],"sites":[22,79,112,181],"3'":[25],"untranslated":[26],"regions":[27],"(UTRs)":[28],"mRNAs.":[30,58],"However,":[31],"increasing":[32],"evidence":[33],"has":[34],"revealed":[35],"that":[36],"miRNAs":[37,140,195],"can":[38],"also":[39],"induce":[40],"mRNA":[41,94,142],"degradation":[42],"and":[43,55,75,87,96,109,126,144,154,159,199],"mediate":[44],"translational":[45],"repression":[46],"via":[47],"complementary":[48],"interactions":[49],"with":[50,165],"coding":[52],"sequence":[53],"(CDS)":[54],"5'UTR":[56],"In":[59],"this":[60],"study,":[61],"we":[62,119,134],"developed":[63],"a":[64,188],"novel":[65],"database,":[66],"MtiBase,":[67],"to":[68,88],"facilitate":[69],"comprehensive":[71],"exploration":[72],"CDS-":[74],"5'UTR-located":[76,129],"identified":[80,120],"from":[81,98,149],"cross-linking":[82],"immunoprecipitation":[83],"sequencing":[84],"(CLIP-Seq)":[85],"datasets":[86,108],"uncover":[89],"regulatory":[91,137],"effects":[92,138,172],"stability":[95,143],"translation":[97,145],"expression":[99,152],"profile":[100],"datasets.":[101],"By":[102],"integrating":[103],"61":[104],"Argonaute":[105],"protein-binding":[106],"CLIP-Seq":[107],"predicted":[113],"by":[114],"five":[115],"commonly":[116],"used":[117],"programs,":[118],"approximately":[121],"4":[122],"400":[123],"000":[124,128],"CDS-located":[125],"470":[127],"sites.":[132],"Moreover,":[133],"evaluated":[135],"using":[146],"data":[148],"222":[150],"profiles,":[153],"28":[155],"ribosome-protected":[156],"fragment":[157],"sequencing,":[158],"six":[160],"pulsed":[161],"stable":[162],"isotope":[163],"labeling":[164],"amino":[166],"acids":[167],"culture.":[169],"Finally,":[170],"SNPs":[174],"were":[182],"systematically":[183],"evaluated.":[184],"Our":[185],"study":[186],"provides":[187],"useful":[189],"tool":[190],"for":[191],"functional":[192],"regulating":[197],"physiology":[198],"pathology.":[200],"Database":[201],"URL:":[202],"http://mtibase.sysu.edu.cn.":[203]},"counts_by_year":[{"year":2026,"cited_by_count":1},{"year":2025,"cited_by_count":1},{"year":2024,"cited_by_count":1},{"year":2023,"cited_by_count":2},{"year":2022,"cited_by_count":3},{"year":2021,"cited_by_count":3},{"year":2020,"cited_by_count":2},{"year":2019,"cited_by_count":4},{"year":2018,"cited_by_count":2},{"year":2017,"cited_by_count":5},{"year":2016,"cited_by_count":4}],"updated_date":"2026-06-25T08:15:23.626066","created_date":"2025-10-10T00:00:00"}