{"id":"https://openalex.org/W2205636404","doi":"https://doi.org/10.1093/database/bav081","title":"Deep Question Answering for protein annotation","display_name":"Deep Question Answering for protein annotation","publication_year":2015,"publication_date":"2015-01-01","ids":{"openalex":"https://openalex.org/W2205636404","doi":"https://doi.org/10.1093/database/bav081","mag":"2205636404","pmid":"https://pubmed.ncbi.nlm.nih.gov/26384372"},"language":"en","primary_location":{"id":"doi:10.1093/database/bav081","is_oa":true,"landing_page_url":"https://doi.org/10.1093/database/bav081","pdf_url":"https://academic.oup.com/database/article-pdf/doi/10.1093/database/bav081/16976262/bav081.pdf","source":{"id":"https://openalex.org/S4210201630","display_name":"Database","issn_l":"1758-0463","issn":["1758-0463"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311647","host_organization_name":"University of Oxford","host_organization_lineage":["https://openalex.org/P4310311647"],"host_organization_lineage_names":["University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Database","raw_type":"journal-article"},"type":"review","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://academic.oup.com/database/article-pdf/doi/10.1093/database/bav081/16976262/bav081.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5091440467","display_name":"Julien Gobeill","orcid":"https://orcid.org/0000-0001-9809-7741"},"institutions":[{"id":"https://openalex.org/I12708293","display_name":"SIB Swiss Institute of Bioinformatics","ror":"https://ror.org/002n09z45","country_code":"CH","type":"funder","lineage":["https://openalex.org/I12708293"]}],"countries":["CH"],"is_corresponding":true,"raw_author_name":"Julien Gobeill","raw_affiliation_strings":["BiTeM group, University of Applied Sciences-HEG, Library and Information Sciences, SIBTex group, Swiss Institute of Bioinformatics, julien.gobeill@hesge.ch","SIBTex group, Swiss Institute of Bioinformatics,","BiTeM group, University of Applied Sciences-HEG, Library and Information Sciences,"],"affiliations":[{"raw_affiliation_string":"BiTeM group, University of Applied Sciences-HEG, Library and Information Sciences, SIBTex group, Swiss Institute of Bioinformatics, julien.gobeill@hesge.ch","institution_ids":[]},{"raw_affiliation_string":"SIBTex group, Swiss Institute of Bioinformatics,","institution_ids":["https://openalex.org/I12708293"]},{"raw_affiliation_string":"BiTeM group, University of Applied Sciences-HEG, Library and Information Sciences,","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5064314998","display_name":"Arnaud Gaudinat","orcid":"https://orcid.org/0000-0003-3807-2256"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Arnaud Gaudinat","raw_affiliation_strings":["BiTeM group, University of Applied Sciences-HEG, Library and Information Sciences","BiTeM group, University of Applied Sciences-HEG, Library and Information Sciences,"],"affiliations":[{"raw_affiliation_string":"BiTeM group, University of Applied Sciences-HEG, Library and Information Sciences","institution_ids":[]},{"raw_affiliation_string":"BiTeM group, University of Applied Sciences-HEG, Library and Information Sciences,","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5017034341","display_name":"Emilie Pasche","orcid":"https://orcid.org/0000-0002-9118-5762"},"institutions":[{"id":"https://openalex.org/I4210106256","display_name":"University Hospital of Geneva","ror":"https://ror.org/01m1pv723","country_code":"CH","type":"healthcare","lineage":["https://openalex.org/I4210106256"]},{"id":"https://openalex.org/I12708293","display_name":"SIB Swiss Institute of Bioinformatics","ror":"https://ror.org/002n09z45","country_code":"CH","type":"funder","lineage":["https://openalex.org/I12708293"]}],"countries":["CH"],"is_corresponding":false,"raw_author_name":"Emilie Pasche","raw_affiliation_strings":["BiTeM group, University of Applied Sciences-HEG, Library and Information Sciences, SIBTex group, Swiss Institute of Bioinformatics, University and Hospitals of Geneva, Division of Medical Information Sciences, Geneva, Switzerland and","BiTeM group, University of Applied Sciences-HEG, Library and Information Sciences,","SIBTex group, Swiss Institute of Bioinformatics,","University and Hospitals of Geneva, Division of Medical Information Sciences, Geneva, Switzerland and"],"affiliations":[{"raw_affiliation_string":"BiTeM group, University of Applied Sciences-HEG, Library and Information Sciences, SIBTex group, Swiss Institute of Bioinformatics, University and Hospitals of Geneva, Division of Medical Information Sciences, Geneva, Switzerland and","institution_ids":[]},{"raw_affiliation_string":"BiTeM group, University of Applied Sciences-HEG, Library and Information Sciences,","institution_ids":[]},{"raw_affiliation_string":"SIBTex group, Swiss Institute of Bioinformatics,","institution_ids":["https://openalex.org/I12708293"]},{"raw_affiliation_string":"University and Hospitals of Geneva, Division of Medical Information Sciences, Geneva, Switzerland and","institution_ids":["https://openalex.org/I4210106256"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5022872913","display_name":"Dina Vishnyakova","orcid":"https://orcid.org/0000-0001-9101-5993"},"institutions":[{"id":"https://openalex.org/I4210106256","display_name":"University Hospital of Geneva","ror":"https://ror.org/01m1pv723","country_code":"CH","type":"healthcare","lineage":["https://openalex.org/I4210106256"]}],"countries":["CH"],"is_corresponding":false,"raw_author_name":"Dina Vishnyakova","raw_affiliation_strings":["University and Hospitals of Geneva, Division of Medical Information Sciences, Geneva, Switzerland and"],"affiliations":[{"raw_affiliation_string":"University and Hospitals of Geneva, Division of Medical Information Sciences, Geneva, Switzerland and","institution_ids":["https://openalex.org/I4210106256"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5014365246","display_name":"Pascale Gaudet","orcid":"https://orcid.org/0000-0003-1813-6857"},"institutions":[{"id":"https://openalex.org/I12708293","display_name":"SIB Swiss Institute of Bioinformatics","ror":"https://ror.org/002n09z45","country_code":"CH","type":"funder","lineage":["https://openalex.org/I12708293"]}],"countries":["CH"],"is_corresponding":false,"raw_author_name":"Pascale Gaudet","raw_affiliation_strings":["Calipho group, Swiss Institute of Bioinformatics"],"affiliations":[{"raw_affiliation_string":"Calipho group, Swiss Institute of Bioinformatics","institution_ids":["https://openalex.org/I12708293"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5069843378","display_name":"Amos Bairoch","orcid":"https://orcid.org/0000-0003-2826-6444"},"institutions":[{"id":"https://openalex.org/I12708293","display_name":"SIB Swiss Institute of Bioinformatics","ror":"https://ror.org/002n09z45","country_code":"CH","type":"funder","lineage":["https://openalex.org/I12708293"]}],"countries":["CH"],"is_corresponding":false,"raw_author_name":"Amos Bairoch","raw_affiliation_strings":["Calipho group, Swiss Institute of Bioinformatics"],"affiliations":[{"raw_affiliation_string":"Calipho group, Swiss Institute of Bioinformatics","institution_ids":["https://openalex.org/I12708293"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5042384742","display_name":"Patrick Ruch","orcid":"https://orcid.org/0000-0002-3374-2962"},"institutions":[{"id":"https://openalex.org/I12708293","display_name":"SIB Swiss Institute of Bioinformatics","ror":"https://ror.org/002n09z45","country_code":"CH","type":"funder","lineage":["https://openalex.org/I12708293"]}],"countries":["CH"],"is_corresponding":false,"raw_author_name":"Patrick Ruch","raw_affiliation_strings":["BiTeM group, University of Applied Sciences-HEG, Library and Information Sciences, SIBTex group, Swiss Institute of Bioinformatics","SIBTex group, Swiss Institute of Bioinformatics,","BiTeM group, University of Applied Sciences-HEG, Library and Information Sciences,"],"affiliations":[{"raw_affiliation_string":"BiTeM group, University of Applied Sciences-HEG, Library and Information Sciences, SIBTex group, Swiss Institute of Bioinformatics","institution_ids":[]},{"raw_affiliation_string":"SIBTex group, Swiss Institute of Bioinformatics,","institution_ids":["https://openalex.org/I12708293"]},{"raw_affiliation_string":"BiTeM group, University of Applied Sciences-HEG, Library and Information Sciences,","institution_ids":[]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":7,"corresponding_author_ids":["https://openalex.org/A5091440467"],"corresponding_institution_ids":["https://openalex.org/I12708293"],"apc_list":{"value":1415,"currency":"GBP","value_usd":1735},"apc_paid":{"value":1415,"currency":"GBP","value_usd":1735},"fwci":1.962,"has_fulltext":true,"cited_by_count":19,"citation_normalized_percentile":{"value":0.86501844,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":99},"biblio":{"volume":"2015","issue":null,"first_page":"bav081","last_page":"bav081"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9980999827384949,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9926000237464905,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.8684645891189575},{"id":"https://openalex.org/keywords/exploit","display_name":"Exploit","score":0.7234806418418884},{"id":"https://openalex.org/keywords/information-retrieval","display_name":"Information retrieval","score":0.7136818766593933},{"id":"https://openalex.org/keywords/classifier","display_name":"Classifier (UML)","score":0.69236820936203},{"id":"https://openalex.org/keywords/question-answering","display_name":"Question answering","score":0.5966211557388306},{"id":"https://openalex.org/keywords/annotation","display_name":"Annotation","score":0.5612598657608032},{"id":"https://openalex.org/keywords/redundancy","display_name":"Redundancy (engineering)","score":0.47028425335884094},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.46811431646347046},{"id":"https://openalex.org/keywords/ontology","display_name":"Ontology","score":0.42197465896606445},{"id":"https://openalex.org/keywords/information-extraction","display_name":"Information extraction","score":0.4165889620780945},{"id":"https://openalex.org/keywords/natural-language-processing","display_name":"Natural language processing","score":0.34603291749954224}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.8684645891189575},{"id":"https://openalex.org/C165696696","wikidata":"https://www.wikidata.org/wiki/Q11287","display_name":"Exploit","level":2,"score":0.7234806418418884},{"id":"https://openalex.org/C23123220","wikidata":"https://www.wikidata.org/wiki/Q816826","display_name":"Information retrieval","level":1,"score":0.7136818766593933},{"id":"https://openalex.org/C95623464","wikidata":"https://www.wikidata.org/wiki/Q1096149","display_name":"Classifier (UML)","level":2,"score":0.69236820936203},{"id":"https://openalex.org/C44291984","wikidata":"https://www.wikidata.org/wiki/Q1074173","display_name":"Question answering","level":2,"score":0.5966211557388306},{"id":"https://openalex.org/C2776321320","wikidata":"https://www.wikidata.org/wiki/Q857525","display_name":"Annotation","level":2,"score":0.5612598657608032},{"id":"https://openalex.org/C152124472","wikidata":"https://www.wikidata.org/wiki/Q1204361","display_name":"Redundancy (engineering)","level":2,"score":0.47028425335884094},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.46811431646347046},{"id":"https://openalex.org/C25810664","wikidata":"https://www.wikidata.org/wiki/Q44325","display_name":"Ontology","level":2,"score":0.42197465896606445},{"id":"https://openalex.org/C195807954","wikidata":"https://www.wikidata.org/wiki/Q1662562","display_name":"Information extraction","level":2,"score":0.4165889620780945},{"id":"https://openalex.org/C204321447","wikidata":"https://www.wikidata.org/wiki/Q30642","display_name":"Natural language processing","level":1,"score":0.34603291749954224},{"id":"https://openalex.org/C38652104","wikidata":"https://www.wikidata.org/wiki/Q3510521","display_name":"Computer security","level":1,"score":0.0},{"id":"https://openalex.org/C111919701","wikidata":"https://www.wikidata.org/wiki/Q9135","display_name":"Operating system","level":1,"score":0.0},{"id":"https://openalex.org/C111472728","wikidata":"https://www.wikidata.org/wiki/Q9471","display_name":"Epistemology","level":1,"score":0.0},{"id":"https://openalex.org/C138885662","wikidata":"https://www.wikidata.org/wiki/Q5891","display_name":"Philosophy","level":0,"score":0.0}],"mesh":[{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D020539","descriptor_name":"Sequence Analysis, Protein","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D020539","descriptor_name":"Sequence Analysis, Protein","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D020539","descriptor_name":"Sequence Analysis, Protein","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D020539","descriptor_name":"Sequence Analysis, Protein","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D057225","descriptor_name":"Data Mining","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D057225","descriptor_name":"Data Mining","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D057225","descriptor_name":"Data Mining","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D057225","descriptor_name":"Data Mining","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D058977","descriptor_name":"Molecular Sequence Annotation","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D058977","descriptor_name":"Molecular Sequence Annotation","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D058977","descriptor_name":"Molecular Sequence Annotation","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D058977","descriptor_name":"Molecular Sequence Annotation","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false}],"locations_count":5,"locations":[{"id":"doi:10.1093/database/bav081","is_oa":true,"landing_page_url":"https://doi.org/10.1093/database/bav081","pdf_url":"https://academic.oup.com/database/article-pdf/doi/10.1093/database/bav081/16976262/bav081.pdf","source":{"id":"https://openalex.org/S4210201630","display_name":"Database","issn_l":"1758-0463","issn":["1758-0463"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311647","host_organization_name":"University of Oxford","host_organization_lineage":["https://openalex.org/P4310311647"],"host_organization_lineage_names":["University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Database","raw_type":"journal-article"},{"id":"pmid:26384372","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/26384372","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Database : the journal of biological databases and curation","raw_type":null},{"id":"pmh:oai:unige.ch:aou:unige:75371","is_oa":true,"landing_page_url":"https://archive-ouverte.unige.ch/unige:75371","pdf_url":null,"source":{"id":"https://openalex.org/S4306402259","display_name":"Archive ouverte UNIGE (University of Geneva)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I114457229","host_organization_name":"University of Geneva","host_organization_lineage":["https://openalex.org/I114457229"],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"ISSN: 1758-0463","raw_type":"info:eu-repo/semantics/article"},{"id":"pmh:oai:hesso.tind.io:1150","is_oa":false,"landing_page_url":"http://arodes.hes-so.ch/record/1150","pdf_url":null,"source":{"id":"https://openalex.org/S4306402432","display_name":"ArODES (HES-SO (https://www.hes-so.ch/))","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I4210088449","host_organization_name":"HES-SO Gen\u00e8ve","host_organization_lineage":["https://openalex.org/I4210088449"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"http://arodes.hes-so.ch/record/1150","raw_type":"Text"},{"id":"pmh:oai:pubmedcentral.nih.gov:4572360","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/4572360","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Database (Oxford)","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1093/database/bav081","is_oa":true,"landing_page_url":"https://doi.org/10.1093/database/bav081","pdf_url":"https://academic.oup.com/database/article-pdf/doi/10.1093/database/bav081/16976262/bav081.pdf","source":{"id":"https://openalex.org/S4210201630","display_name":"Database","issn_l":"1758-0463","issn":["1758-0463"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311647","host_organization_name":"University of Oxford","host_organization_lineage":["https://openalex.org/P4310311647"],"host_organization_lineage_names":["University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Database","raw_type":"journal-article"},"sustainable_development_goals":[{"id":"https://metadata.un.org/sdg/4","display_name":"Quality Education","score":0.6100000143051147}],"awards":[{"id":"https://openalex.org/G1039912989","display_name":"neXtpresso, accelerating annotation via automated approaches","funder_award_id":"153437","funder_id":"https://openalex.org/F4320320924","funder_display_name":"Schweizerischer Nationalfonds zur F\u00f6rderung der Wissenschaftlichen Forschung"},{"id":"https://openalex.org/G482349970","display_name":"Syst\u00e8mes magn\u00e9tiques complexes.","funder_award_id":"53437","funder_id":"https://openalex.org/F4320320924","funder_display_name":"Schweizerischer Nationalfonds zur F\u00f6rderung der Wissenschaftlichen Forschung"},{"id":"https://openalex.org/G525758720","display_name":null,"funder_award_id":"SNF #153437","funder_id":"https://openalex.org/F4320320924","funder_display_name":"Schweizerischer Nationalfonds zur F\u00f6rderung der Wissenschaftlichen Forschung"},{"id":"https://openalex.org/G711131400","display_name":"Urner Namenbuch. I Band","funder_award_id":"15343","funder_id":"https://openalex.org/F4320320924","funder_display_name":"Schweizerischer Nationalfonds zur F\u00f6rderung der Wissenschaftlichen Forschung"}],"funders":[{"id":"https://openalex.org/F4320320924","display_name":"Schweizerischer Nationalfonds zur F\u00f6rderung der Wissenschaftlichen Forschung","ror":"https://ror.org/00yjd3n13"},{"id":"https://openalex.org/F4320326610","display_name":"Haute \u00e9cole Sp\u00e9cialis\u00e9e de Suisse Occidentale","ror":"https://ror.org/03r5zec51"}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2205636404.pdf","grobid_xml":"https://content.openalex.org/works/W2205636404.grobid-xml"},"referenced_works_count":30,"referenced_works":["https://openalex.org/W31203743","https://openalex.org/W124454490","https://openalex.org/W150922308","https://openalex.org/W1574901103","https://openalex.org/W1923459080","https://openalex.org/W1976316416","https://openalex.org/W2000431947","https://openalex.org/W2042719229","https://openalex.org/W2045812729","https://openalex.org/W2056119436","https://openalex.org/W2061172803","https://openalex.org/W2091978351","https://openalex.org/W2103017472","https://openalex.org/W2112227057","https://openalex.org/W2114370860","https://openalex.org/W2115024484","https://openalex.org/W2115150863","https://openalex.org/W2132784310","https://openalex.org/W2141773193","https://openalex.org/W2145000359","https://openalex.org/W2157963512","https://openalex.org/W2159065781","https://openalex.org/W2159335058","https://openalex.org/W2163303745","https://openalex.org/W2395039075","https://openalex.org/W6601240661","https://openalex.org/W6605021222","https://openalex.org/W6606184565","https://openalex.org/W6675471023","https://openalex.org/W6712468773"],"related_works":["https://openalex.org/W2361861616","https://openalex.org/W2263699433","https://openalex.org/W2377979023","https://openalex.org/W2218034408","https://openalex.org/W2392921965","https://openalex.org/W2384605597","https://openalex.org/W2358755282","https://openalex.org/W2387743295","https://openalex.org/W2625833328","https://openalex.org/W1984061923"],"abstract_inverted_index":{"Biomedical":[0],"professionals":[1],"have":[2,19],"access":[3],"to":[4,20,26,44,88,160,190,248],"a":[5,14,33,61,131,151,217,242,261],"huge":[6],"amount":[7],"of":[8,75,121,134,149,257],"literature,":[9],"but":[10],"when":[11],"they":[12,17],"use":[13],"search":[15],"engine,":[16],"often":[18],"deal":[21],"with":[22,260],"too":[23],"many":[24],"documents":[25,67,77],"efficiently":[27],"find":[28],"the":[29,52,119,141,147,157,199,213,252,255,258],"appropriate":[30],"information":[31,236],"in":[32,58,198],"reasonable":[34],"time.":[35],"In":[36,83,140,227],"this":[37],"perspective,":[38],"question-answering":[39],"(QA)":[40],"engines":[41,57],"are":[42,194,224],"designed":[43],"display":[45],"answers,":[46,192],"which":[47,93,193],"were":[48,165],"automatically":[49],"extracted":[50],"from":[51,130],"retrieved":[53,136,200],"documents.":[54,201],"Standard":[55],"QA":[56,115],"literature":[59],"process":[60],"user":[62],"question,":[63],"then":[64],"retrieve":[65],"relevant":[66],"and":[68,113,185,254,267],"finally":[69],"extract":[70],"some":[71],"possible":[72],"answers":[73,106,129,207,259],"out":[74],"these":[76],"using":[78,99,110],"various":[79],"named-entity":[80],"recognition":[81],"processes.":[82],"our":[84],"study,":[85],"we":[86,144,229],"try":[87],"answer":[89],"complex":[90,105,206],"genomics":[91],"questions,":[92],"can":[94,238],"be":[95,108,239],"adequately":[96],"answered":[97],"only":[98],"Gene":[100],"Ontology":[101],"(GO)":[102],"concepts.":[103],"Such":[104],"cannot":[107],"found":[109],"state-of-the-art":[111],"dictionary-":[112],"redundancy-based":[114],"engines.":[116],"We":[117,202],"compare":[118],"effectiveness":[120],"two":[122],"dictionary-based":[123,222],"classifiers":[124],"for":[125,169,205,264],"extracting":[126],"correct":[127],"GO":[128,152,162],"large":[132],"set":[133],"100":[135],"abstracts":[137],"per":[138],"question.":[139],"same":[142],"way,":[143],"also":[145],"investigate":[146],"power":[148],"GOCat,":[150,247],"supervised":[153,243],"classifier.":[154],"GOCat":[155],"exploits":[156,186],"GOA":[158],"database":[159],"propose":[161],"concepts":[163],"that":[164,204],"annotated":[166],"by":[167,241],"curators":[168],"similar":[170],"abstracts.":[171],"This":[172],"approach":[173],"is":[174],"called":[175],"deep":[176],"QA,":[177],"as":[178,209,246],"it":[179],"adds":[180],"an":[181],"original":[182],"classification":[183],"step,":[184],"curated":[187,233],"biological":[188],"data":[189],"infer":[191],"not":[195],"explicitly":[196],"mentioned":[197],"show":[203],"such":[208,245],"protein":[210],"functional":[211],"descriptions,":[212],"redundancy":[214],"phenomenon":[215],"has":[216],"limited":[218],"effect.":[219],"Similarly":[220],"usual":[221],"approaches":[223],"relatively":[225],"ineffective.":[226],"contrast,":[228],"demonstrate":[230],"how":[231],"existing":[232],"data,":[234],"beyond":[235],"extraction,":[237],"exploited":[240],"classifier,":[244],"massively":[249],"improve":[250],"both":[251,265],"quantity":[253],"quality":[256],"+100%":[262],"improvement":[263],"recall":[266],"precision.":[268],"Database":[269],"URL:":[270],"http://eagl.unige.ch/DeepQA4PA/.":[271]},"counts_by_year":[{"year":2024,"cited_by_count":2},{"year":2023,"cited_by_count":1},{"year":2022,"cited_by_count":1},{"year":2021,"cited_by_count":1},{"year":2019,"cited_by_count":1},{"year":2018,"cited_by_count":2},{"year":2017,"cited_by_count":6},{"year":2016,"cited_by_count":5}],"updated_date":"2026-04-21T08:09:41.155169","created_date":"2025-10-10T00:00:00"}
