{"id":"https://openalex.org/W2216590862","doi":"https://doi.org/10.1093/database/bav060","title":"SInCRe\u2014structural interactome computational resource for<i>Mycobacterium tuberculosis</i>","display_name":"SInCRe\u2014structural interactome computational resource for<i>Mycobacterium tuberculosis</i>","publication_year":2015,"publication_date":"2015-01-01","ids":{"openalex":"https://openalex.org/W2216590862","doi":"https://doi.org/10.1093/database/bav060","mag":"2216590862","pmid":"https://pubmed.ncbi.nlm.nih.gov/26130660"},"language":"en","primary_location":{"id":"doi:10.1093/database/bav060","is_oa":true,"landing_page_url":"https://doi.org/10.1093/database/bav060","pdf_url":"https://academic.oup.com/database/article-pdf/doi/10.1093/database/bav060/16976126/bav060.pdf","source":{"id":"https://openalex.org/S4210201630","display_name":"Database","issn_l":"1758-0463","issn":["1758-0463"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311647","host_organization_name":"University of Oxford","host_organization_lineage":["https://openalex.org/P4310311647"],"host_organization_lineage_names":["University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Database","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://academic.oup.com/database/article-pdf/doi/10.1093/database/bav060/16976126/bav060.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5027106370","display_name":"Rahul Metri","orcid":null},"institutions":[{"id":"https://openalex.org/I59270414","display_name":"Indian Institute of Science Bangalore","ror":"https://ror.org/04dese585","country_code":"IN","type":"education","lineage":["https://openalex.org/I59270414"]}],"countries":["IN"],"is_corresponding":false,"raw_author_name":"Rahul Metri","raw_affiliation_strings":["Department of Biochemistry and Indian Institute of Science Mathematics Initiative, Indian Institute of Science, Bangalore, India","Indian Institute of Science Mathematics Initiative, Indian Institute of Science, Bangalore, India,","Department of Biochemistry and"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Biochemistry and Indian Institute of Science Mathematics Initiative, Indian Institute of Science, Bangalore, India","institution_ids":["https://openalex.org/I59270414"]},{"raw_affiliation_string":"Indian Institute of Science Mathematics Initiative, Indian Institute of Science, Bangalore, India,","institution_ids":["https://openalex.org/I59270414"]},{"raw_affiliation_string":"Department of Biochemistry and","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5017809913","display_name":"Sridhar Hariharaputran","orcid":"https://orcid.org/0000-0002-9979-3244"},"institutions":[{"id":"https://openalex.org/I194223965","display_name":"National Centre for Biological Sciences","ror":"https://ror.org/03gf8rp76","country_code":"IN","type":"facility","lineage":["https://openalex.org/I11947397","https://openalex.org/I194223965","https://openalex.org/I2799351866","https://openalex.org/I3149292468"]}],"countries":["IN"],"is_corresponding":false,"raw_author_name":"Sridhar Hariharaputran","raw_affiliation_strings":["Department of Biochemistry and National Centre for Biological Sciences, TIFR, UAS-GKVK Campus, Bellary Road, Bangalore, India","Department of Biochemistry and","National Centre for Biological Sciences, TIFR, UAS-GKVK Campus, Bellary Road, Bangalore, India,"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Biochemistry and National Centre for Biological Sciences, TIFR, UAS-GKVK Campus, Bellary Road, Bangalore, India","institution_ids":["https://openalex.org/I194223965"]},{"raw_affiliation_string":"Department of Biochemistry and","institution_ids":[]},{"raw_affiliation_string":"National Centre for Biological Sciences, TIFR, UAS-GKVK Campus, Bellary Road, Bangalore, India,","institution_ids":["https://openalex.org/I194223965"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5045562283","display_name":"Gayatri Ramakrishnan","orcid":"https://orcid.org/0000-0001-8203-2783"},"institutions":[{"id":"https://openalex.org/I59270414","display_name":"Indian Institute of Science Bangalore","ror":"https://ror.org/04dese585","country_code":"IN","type":"education","lineage":["https://openalex.org/I59270414"]}],"countries":["IN"],"is_corresponding":false,"raw_author_name":"Gayatri Ramakrishnan","raw_affiliation_strings":["Indian Institute of Science Mathematics Initiative, Indian Institute of Science, Bangalore, India, Molecular Biophysics Unit, Indian Institute of Science, Bangalore, India, and","Indian Institute of Science Mathematics Initiative, Indian Institute of Science, Bangalore, India,","Molecular Biophysics Unit, Indian Institute of Science, Bangalore, India, and"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Indian Institute of Science Mathematics Initiative, Indian Institute of Science, Bangalore, India, Molecular Biophysics Unit, Indian Institute of Science, Bangalore, India, and","institution_ids":["https://openalex.org/I59270414"]},{"raw_affiliation_string":"Indian Institute of Science Mathematics Initiative, Indian Institute of Science, Bangalore, India,","institution_ids":["https://openalex.org/I59270414"]},{"raw_affiliation_string":"Molecular Biophysics Unit, Indian Institute of Science, Bangalore, India, and","institution_ids":["https://openalex.org/I59270414"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5069664472","display_name":"Praveen Anand","orcid":"https://orcid.org/0000-0002-2478-7042"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Praveen Anand","raw_affiliation_strings":["Department of Biochemistry and"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Biochemistry and","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5003779308","display_name":"U.S. Raghavender","orcid":null},"institutions":[{"id":"https://openalex.org/I194223965","display_name":"National Centre for Biological Sciences","ror":"https://ror.org/03gf8rp76","country_code":"IN","type":"facility","lineage":["https://openalex.org/I11947397","https://openalex.org/I194223965","https://openalex.org/I2799351866","https://openalex.org/I3149292468"]}],"countries":["IN"],"is_corresponding":false,"raw_author_name":"Upadhyayula S. Raghavender","raw_affiliation_strings":["National Centre for Biological Sciences, TIFR, UAS-GKVK Campus, Bellary Road, Bangalore, India","National Centre for Biological Sciences, TIFR, UAS-GKVK Campus, Bellary Road, Bangalore, India,"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"National Centre for Biological Sciences, TIFR, UAS-GKVK Campus, Bellary Road, Bangalore, India","institution_ids":["https://openalex.org/I194223965"]},{"raw_affiliation_string":"National Centre for Biological Sciences, TIFR, UAS-GKVK Campus, Bellary Road, Bangalore, India,","institution_ids":["https://openalex.org/I194223965"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5034718765","display_name":"Bernardo Ochoa\u2010Monta\u00f1o","orcid":null},"institutions":[{"id":"https://openalex.org/I241749","display_name":"University of Cambridge","ror":"https://ror.org/013meh722","country_code":"GB","type":"education","lineage":["https://openalex.org/I241749"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Bernardo Ochoa-Monta\u00f1o","raw_affiliation_strings":["Department of Biochemistry, University of Cambridge, Tennis Court Road, Cambridge, UK"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Biochemistry, University of Cambridge, Tennis Court Road, Cambridge, UK","institution_ids":["https://openalex.org/I241749"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5060273811","display_name":"Al\u00edcia P. Higueruelo","orcid":"https://orcid.org/0000-0001-5616-6593"},"institutions":[{"id":"https://openalex.org/I241749","display_name":"University of Cambridge","ror":"https://ror.org/013meh722","country_code":"GB","type":"education","lineage":["https://openalex.org/I241749"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Alicia P. Higueruelo","raw_affiliation_strings":["Department of Biochemistry, University of Cambridge, Tennis Court Road, Cambridge, UK"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Biochemistry, University of Cambridge, Tennis Court Road, Cambridge, UK","institution_ids":["https://openalex.org/I241749"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5076779054","display_name":"Ramanathan Sowdhamini","orcid":"https://orcid.org/0000-0002-6642-2367"},"institutions":[{"id":"https://openalex.org/I194223965","display_name":"National Centre for Biological Sciences","ror":"https://ror.org/03gf8rp76","country_code":"IN","type":"facility","lineage":["https://openalex.org/I11947397","https://openalex.org/I194223965","https://openalex.org/I2799351866","https://openalex.org/I3149292468"]}],"countries":["IN"],"is_corresponding":false,"raw_author_name":"Ramanathan Sowdhamini","raw_affiliation_strings":["National Centre for Biological Sciences, TIFR, UAS-GKVK Campus, Bellary Road, Bangalore, India","National Centre for Biological Sciences, TIFR, UAS-GKVK Campus, Bellary Road, Bangalore, India,"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"National Centre for Biological Sciences, TIFR, UAS-GKVK Campus, Bellary Road, Bangalore, India","institution_ids":["https://openalex.org/I194223965"]},{"raw_affiliation_string":"National Centre for Biological Sciences, TIFR, UAS-GKVK Campus, Bellary Road, Bangalore, India,","institution_ids":["https://openalex.org/I194223965"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5085789773","display_name":"Nagasuma Chandra","orcid":"https://orcid.org/0000-0002-9939-8439"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Nagasuma R. Chandra","raw_affiliation_strings":["Department of Biochemistry and"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Biochemistry and","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5001029093","display_name":"Tom L. Blundell","orcid":"https://orcid.org/0000-0002-2708-8992"},"institutions":[{"id":"https://openalex.org/I241749","display_name":"University of Cambridge","ror":"https://ror.org/013meh722","country_code":"GB","type":"education","lineage":["https://openalex.org/I241749"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Tom L. Blundell","raw_affiliation_strings":["Department of Biochemistry, University of Cambridge, Tennis Court Road, Cambridge, UK"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Biochemistry, University of Cambridge, Tennis Court Road, Cambridge, UK","institution_ids":["https://openalex.org/I241749"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5076920718","display_name":"Narayanaswamy Srinivasan","orcid":"https://orcid.org/0000-0002-6566-6239"},"institutions":[{"id":"https://openalex.org/I59270414","display_name":"Indian Institute of Science Bangalore","ror":"https://ror.org/04dese585","country_code":"IN","type":"education","lineage":["https://openalex.org/I59270414"]}],"countries":["IN"],"is_corresponding":false,"raw_author_name":"Narayanaswamy Srinivasan","raw_affiliation_strings":["Molecular Biophysics Unit, Indian Institute of Science, Bangalore, India, and ns@mbu.iisc.ernet.in","Molecular Biophysics Unit, Indian Institute of Science, Bangalore, India, and"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Molecular Biophysics Unit, Indian Institute of Science, Bangalore, India, and ns@mbu.iisc.ernet.in","institution_ids":["https://openalex.org/I59270414"]},{"raw_affiliation_string":"Molecular Biophysics Unit, Indian Institute of Science, Bangalore, India, and","institution_ids":["https://openalex.org/I59270414"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":11,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":{"value":1415,"currency":"GBP","value_usd":1735},"apc_paid":{"value":1415,"currency":"GBP","value_usd":1735},"fwci":1.1767,"has_fulltext":true,"cited_by_count":13,"citation_normalized_percentile":{"value":0.78593341,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":98},"biblio":{"volume":"2015","issue":null,"first_page":"bav060","last_page":"bav060"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10038","display_name":"Tuberculosis Research and Epidemiology","score":0.9983000159263611,"subfield":{"id":"https://openalex.org/subfields/2725","display_name":"Infectious Diseases"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},"topics":[{"id":"https://openalex.org/T10038","display_name":"Tuberculosis Research and Epidemiology","score":0.9983000159263611,"subfield":{"id":"https://openalex.org/subfields/2725","display_name":"Infectious Diseases"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T12827","display_name":"Biochemical and Molecular Research","score":0.9929999709129333,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10211","display_name":"Computational Drug Discovery Methods","score":0.9887999892234802,"subfield":{"id":"https://openalex.org/subfields/1703","display_name":"Computational Theory and Mathematics"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/interactome","display_name":"Interactome","score":0.9480654001235962},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.661711573600769},{"id":"https://openalex.org/keywords/mycobacterium-tuberculosis","display_name":"Mycobacterium tuberculosis","score":0.6057286262512207},{"id":"https://openalex.org/keywords/annotation","display_name":"Annotation","score":0.5992217659950256},{"id":"https://openalex.org/keywords/identification","display_name":"Identification (biology)","score":0.5340705513954163},{"id":"https://openalex.org/keywords/protein-structure-database","display_name":"Protein structure database","score":0.4474320113658905},{"id":"https://openalex.org/keywords/function","display_name":"Function (biology)","score":0.4260818362236023},{"id":"https://openalex.org/keywords/tuberculosis","display_name":"Tuberculosis","score":0.42301130294799805},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.40671584010124207},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.3603356182575226},{"id":"https://openalex.org/keywords/database","display_name":"Database","score":0.35346460342407227},{"id":"https://openalex.org/keywords/bioinformatics","display_name":"Bioinformatics","score":0.2799123227596283},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.17958253622055054},{"id":"https://openalex.org/keywords/sequence-database","display_name":"Sequence database","score":0.15623697638511658},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.11670452356338501},{"id":"https://openalex.org/keywords/medicine","display_name":"Medicine","score":0.09201660752296448}],"concepts":[{"id":"https://openalex.org/C9760119","wikidata":"https://www.wikidata.org/wiki/Q841382","display_name":"Interactome","level":3,"score":0.9480654001235962},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.661711573600769},{"id":"https://openalex.org/C2777975735","wikidata":"https://www.wikidata.org/wiki/Q130971","display_name":"Mycobacterium tuberculosis","level":3,"score":0.6057286262512207},{"id":"https://openalex.org/C2776321320","wikidata":"https://www.wikidata.org/wiki/Q857525","display_name":"Annotation","level":2,"score":0.5992217659950256},{"id":"https://openalex.org/C116834253","wikidata":"https://www.wikidata.org/wiki/Q2039217","display_name":"Identification (biology)","level":2,"score":0.5340705513954163},{"id":"https://openalex.org/C136475424","wikidata":"https://www.wikidata.org/wiki/Q7251500","display_name":"Protein structure database","level":4,"score":0.4474320113658905},{"id":"https://openalex.org/C14036430","wikidata":"https://www.wikidata.org/wiki/Q3736076","display_name":"Function (biology)","level":2,"score":0.4260818362236023},{"id":"https://openalex.org/C2781069245","wikidata":"https://www.wikidata.org/wiki/Q12204","display_name":"Tuberculosis","level":2,"score":0.42301130294799805},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.40671584010124207},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.3603356182575226},{"id":"https://openalex.org/C77088390","wikidata":"https://www.wikidata.org/wiki/Q8513","display_name":"Database","level":1,"score":0.35346460342407227},{"id":"https://openalex.org/C60644358","wikidata":"https://www.wikidata.org/wiki/Q128570","display_name":"Bioinformatics","level":1,"score":0.2799123227596283},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.17958253622055054},{"id":"https://openalex.org/C41584329","wikidata":"https://www.wikidata.org/wiki/Q175902","display_name":"Sequence database","level":3,"score":0.15623697638511658},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.11670452356338501},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.09201660752296448},{"id":"https://openalex.org/C142724271","wikidata":"https://www.wikidata.org/wiki/Q7208","display_name":"Pathology","level":1,"score":0.0},{"id":"https://openalex.org/C59822182","wikidata":"https://www.wikidata.org/wiki/Q441","display_name":"Botany","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000995","descriptor_name":"Antitubercular Agents","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D000995","descriptor_name":"Antitubercular Agents","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D000995","descriptor_name":"Antitubercular Agents","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D000995","descriptor_name":"Antitubercular Agents","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D000995","descriptor_name":"Antitubercular Agents","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D000995","descriptor_name":"Antitubercular Agents","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D001426","descriptor_name":"Bacterial Proteins","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D001426","descriptor_name":"Bacterial Proteins","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D001426","descriptor_name":"Bacterial Proteins","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D001426","descriptor_name":"Bacterial Proteins","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":true},{"descriptor_ui":"D001426","descriptor_name":"Bacterial Proteins","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":true},{"descriptor_ui":"D001426","descriptor_name":"Bacterial Proteins","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":true},{"descriptor_ui":"D003198","descriptor_name":"Computer Simulation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D003198","descriptor_name":"Computer Simulation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D003198","descriptor_name":"Computer Simulation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D009169","descriptor_name":"Mycobacterium tuberculosis","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D009169","descriptor_name":"Mycobacterium tuberculosis","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D009169","descriptor_name":"Mycobacterium tuberculosis","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D009169","descriptor_name":"Mycobacterium tuberculosis","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":true},{"descriptor_ui":"D009169","descriptor_name":"Mycobacterium tuberculosis","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":true},{"descriptor_ui":"D009169","descriptor_name":"Mycobacterium tuberculosis","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":true},{"descriptor_ui":"D017434","descriptor_name":"Protein Structure, Tertiary","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D017434","descriptor_name":"Protein Structure, Tertiary","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D017434","descriptor_name":"Protein Structure, Tertiary","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D030562","descriptor_name":"Databases, Protein","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030562","descriptor_name":"Databases, Protein","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030562","descriptor_name":"Databases, Protein","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true}],"locations_count":3,"locations":[{"id":"doi:10.1093/database/bav060","is_oa":true,"landing_page_url":"https://doi.org/10.1093/database/bav060","pdf_url":"https://academic.oup.com/database/article-pdf/doi/10.1093/database/bav060/16976126/bav060.pdf","source":{"id":"https://openalex.org/S4210201630","display_name":"Database","issn_l":"1758-0463","issn":["1758-0463"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311647","host_organization_name":"University of Oxford","host_organization_lineage":["https://openalex.org/P4310311647"],"host_organization_lineage_names":["University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Database","raw_type":"journal-article"},{"id":"pmid:26130660","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/26130660","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Database : the journal of biological databases and curation","raw_type":null},{"id":"pmh:oai:europepmc.org:3453736","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/4485431","pdf_url":null,"source":{"id":"https://openalex.org/S4306400806","display_name":"Europe PMC (PubMed Central)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1303153112","host_organization_name":"European Bioinformatics Institute","host_organization_lineage":["https://openalex.org/I1303153112"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1093/database/bav060","is_oa":true,"landing_page_url":"https://doi.org/10.1093/database/bav060","pdf_url":"https://academic.oup.com/database/article-pdf/doi/10.1093/database/bav060/16976126/bav060.pdf","source":{"id":"https://openalex.org/S4210201630","display_name":"Database","issn_l":"1758-0463","issn":["1758-0463"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311647","host_organization_name":"University of Oxford","host_organization_lineage":["https://openalex.org/P4310311647"],"host_organization_lineage_names":["University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Database","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[],"funders":[{"id":"https://openalex.org/F4320320721","display_name":"Council of Scientific and Industrial Research, India","ror":"https://ror.org/021wm7p51"},{"id":"https://openalex.org/F4320332167","display_name":"Directorate for Biological Sciences","ror":"https://ror.org/001xhss06"},{"id":"https://openalex.org/F4320335065","display_name":"National Centre for Biological Sciences","ror":"https://ror.org/03gf8rp76"},{"id":"https://openalex.org/F4320335267","display_name":"Open Source Drug Discovery","ror":"https://ror.org/05pvypf90"}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2216590862.pdf","grobid_xml":"https://content.openalex.org/works/W2216590862.grobid-xml"},"referenced_works_count":68,"referenced_works":["https://openalex.org/W1975459052","https://openalex.org/W1978370150","https://openalex.org/W1985588649","https://openalex.org/W1999613945","https://openalex.org/W2004228538","https://openalex.org/W2009423060","https://openalex.org/W2015507989","https://openalex.org/W2023170820","https://openalex.org/W2039951087","https://openalex.org/W2040595595","https://openalex.org/W2041417685","https://openalex.org/W2046620897","https://openalex.org/W2051210555","https://openalex.org/W2051783184","https://openalex.org/W2054684801","https://openalex.org/W2056180063","https://openalex.org/W2057545775","https://openalex.org/W2058034454","https://openalex.org/W2058558815","https://openalex.org/W2059536443","https://openalex.org/W2061636126","https://openalex.org/W2064428882","https://openalex.org/W2066666235","https://openalex.org/W2068719071","https://openalex.org/W2075451617","https://openalex.org/W2075451741","https://openalex.org/W2077804275","https://openalex.org/W2084099736","https://openalex.org/W2085553315","https://openalex.org/W2096221200","https://openalex.org/W2096541451","https://openalex.org/W2099946731","https://openalex.org/W2102245393","https://openalex.org/W2102377211","https://openalex.org/W2102993309","https://openalex.org/W2104916446","https://openalex.org/W2107158607","https://openalex.org/W2107249189","https://openalex.org/W2110670805","https://openalex.org/W2112109058","https://openalex.org/W2113825415","https://openalex.org/W2114659440","https://openalex.org/W2120574189","https://openalex.org/W2121277457","https://openalex.org/W2121666644","https://openalex.org/W2130479394","https://openalex.org/W2131736388","https://openalex.org/W2133812171","https://openalex.org/W2134967712","https://openalex.org/W2137052779","https://openalex.org/W2138122982","https://openalex.org/W2141885858","https://openalex.org/W2142767173","https://openalex.org/W2143482176","https://openalex.org/W2149095014","https://openalex.org/W2149949919","https://openalex.org/W2151831732","https://openalex.org/W2152517415","https://openalex.org/W2158714788","https://openalex.org/W2161062388","https://openalex.org/W2161865146","https://openalex.org/W2162011385","https://openalex.org/W2164675361","https://openalex.org/W2171660521","https://openalex.org/W3009705041","https://openalex.org/W4240401512","https://openalex.org/W4285719527","https://openalex.org/W4320301318"],"related_works":["https://openalex.org/W4308058527","https://openalex.org/W2972094210","https://openalex.org/W2110949356","https://openalex.org/W4210506554","https://openalex.org/W2042252940","https://openalex.org/W1538374398","https://openalex.org/W1986832896","https://openalex.org/W2050407936","https://openalex.org/W2411061500","https://openalex.org/W3160640465"],"abstract_inverted_index":{"We":[0],"have":[1],"developed":[2,38,86],"an":[3,56],"integrated":[4,57,102],"database":[5,52,105,117],"for":[6,48,186],"Mycobacterium":[7],"tuberculosis":[8],"H37Rv":[9],"(Mtb)":[10],"that":[11,166],"collates":[12],"information":[13,24,120,149],"on":[14,113,121,150],"protein":[15],"sequences,":[16],"domain":[17],"assignments,":[18],"functional":[19,124],"annotation":[20],"and":[21,28,43,63,67,84,100,133,156,163,172],"3D":[22],"structural":[23,109],"along":[25],"with":[26],"protein-protein":[27,160,180],"protein-small":[29],"molecule":[30],"interactions.":[31,181],"SInCRe":[32,116],"(Structural":[33],"Interactome":[34],"Computational":[35],"Resource)":[36],"is":[37,53],"out":[39],"of":[40,50,65,79,123,128,130,135,178,188],"CamBan":[41,75,93],"(Cambridge":[42],"Bangalore)":[44],"collaboration.":[45],"The":[46,115,142],"motivation":[47],"development":[49],"this":[51,104],"to":[54,59,96,106,111,168],"provide":[55,107,184],"platform":[58],"allow":[60],"easily":[61],"access":[62],"interpretation":[64],"data":[66],"results":[68],"obtained":[69],"by":[70,88],"all":[71],"the":[72,77,136],"groups":[73,91],"in":[74,76,92,103,174],"field":[78],"Mtb":[80,131],"informatics.":[81],"In-house":[82],"algorithms":[83],"databases":[85],"independently":[87],"various":[89],"academic":[90],"are":[94,101],"used":[95],"generate":[97],"Mtb-specific":[98],"datasets":[99],"a":[108],"dimension":[110],"studies":[112],"tuberculosis.":[114],"readily":[118],"provides":[119,145],"identification":[122,187],"domains,":[125],"genome-scale":[126],"modelling":[127],"structures":[129],"proteins":[132,170],"characterization":[134],"small-molecule":[137,151],"binding":[138],"sites":[139],"within":[140],"Mtb.":[141],"resource":[143],"also":[144],"structure-based":[146],"function":[147],"annotation,":[148],"binders":[152],"including":[153],"FDA":[154],"(Food":[155],"Drug":[157],"Administration)-approved":[158],"drugs,":[159],"interactions":[161],"(PPIs)":[162],"natural":[164],"compounds":[165],"bind":[167],"pathogen":[169],"potentially":[171],"result":[173],"weakening":[175],"or":[176],"elimination":[177],"host-pathogen":[179],"Together":[182],"they":[183],"prerequisites":[185],"off-target":[189],"binding.":[190]},"counts_by_year":[{"year":2025,"cited_by_count":1},{"year":2024,"cited_by_count":1},{"year":2023,"cited_by_count":2},{"year":2022,"cited_by_count":1},{"year":2021,"cited_by_count":1},{"year":2019,"cited_by_count":1},{"year":2018,"cited_by_count":2},{"year":2017,"cited_by_count":4}],"updated_date":"2026-06-11T09:08:48.828518","created_date":"2016-06-24T00:00:00"}
