{"id":"https://openalex.org/W2168644196","doi":"https://doi.org/10.1093/database/bau070","title":"Text-mining-assisted biocuration workflows in Argo","display_name":"Text-mining-assisted biocuration workflows in Argo","publication_year":2014,"publication_date":"2014-01-01","ids":{"openalex":"https://openalex.org/W2168644196","doi":"https://doi.org/10.1093/database/bau070","mag":"2168644196","pmid":"https://pubmed.ncbi.nlm.nih.gov/25037308"},"language":"en","primary_location":{"id":"doi:10.1093/database/bau070","is_oa":true,"landing_page_url":"https://doi.org/10.1093/database/bau070","pdf_url":"https://academic.oup.com/database/article-pdf/doi/10.1093/database/bau070/17472907/bau070.pdf","source":{"id":"https://openalex.org/S4210201630","display_name":"Database","issn_l":"1758-0463","issn":["1758-0463"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311647","host_organization_name":"University of Oxford","host_organization_lineage":["https://openalex.org/P4310311647"],"host_organization_lineage_names":["University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Database","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://academic.oup.com/database/article-pdf/doi/10.1093/database/bau070/17472907/bau070.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5071577126","display_name":"Rafa\u0142 Rak","orcid":"https://orcid.org/0000-0001-9780-4205"},"institutions":[{"id":"https://openalex.org/I28407311","display_name":"University of Manchester","ror":"https://ror.org/027m9bs27","country_code":"GB","type":"education","lineage":["https://openalex.org/I28407311"]},{"id":"https://openalex.org/I87074743","display_name":"University of the Philippines Diliman","ror":"https://ror.org/03tbh6y23","country_code":"PH","type":"education","lineage":["https://openalex.org/I103911934","https://openalex.org/I87074743"]}],"countries":["GB","PH"],"is_corresponding":true,"raw_author_name":"Rafal Rak","raw_affiliation_strings":["National Centre for Text Mining, School of Computer Science, University of Manchester, UK and 2Department of Computer Science, University of the Philippines Diliman, Philippines"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"National Centre for Text Mining, School of Computer Science, University of Manchester, UK and 2Department of Computer Science, University of the Philippines Diliman, Philippines","institution_ids":["https://openalex.org/I28407311","https://openalex.org/I87074743"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5050960711","display_name":"Riza Batista-Navarro","orcid":"https://orcid.org/0000-0001-6693-7531"},"institutions":[{"id":"https://openalex.org/I28407311","display_name":"University of Manchester","ror":"https://ror.org/027m9bs27","country_code":"GB","type":"education","lineage":["https://openalex.org/I28407311"]},{"id":"https://openalex.org/I87074743","display_name":"University of the Philippines Diliman","ror":"https://ror.org/03tbh6y23","country_code":"PH","type":"education","lineage":["https://openalex.org/I103911934","https://openalex.org/I87074743"]}],"countries":["GB","PH"],"is_corresponding":false,"raw_author_name":"Riza Theresa Batista-Navarro","raw_affiliation_strings":["National Centre for Text Mining, School of Computer Science, University of Manchester, UK and 2Department of Computer Science, University of the Philippines Diliman, Philippines"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"National Centre for Text Mining, School of Computer Science, University of Manchester, UK and 2Department of Computer Science, University of the Philippines Diliman, Philippines","institution_ids":["https://openalex.org/I28407311","https://openalex.org/I87074743"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5069244841","display_name":"Andrew Rowley","orcid":"https://orcid.org/0000-0002-2646-8520"},"institutions":[{"id":"https://openalex.org/I28407311","display_name":"University of Manchester","ror":"https://ror.org/027m9bs27","country_code":"GB","type":"education","lineage":["https://openalex.org/I28407311"]},{"id":"https://openalex.org/I87074743","display_name":"University of the Philippines Diliman","ror":"https://ror.org/03tbh6y23","country_code":"PH","type":"education","lineage":["https://openalex.org/I103911934","https://openalex.org/I87074743"]}],"countries":["GB","PH"],"is_corresponding":false,"raw_author_name":"Andrew Rowley","raw_affiliation_strings":["National Centre for Text Mining, School of Computer Science, University of Manchester, UK and 2Department of Computer Science, University of the Philippines Diliman, Philippines"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"National Centre for Text Mining, School of Computer Science, University of Manchester, UK and 2Department of Computer Science, University of the Philippines Diliman, Philippines","institution_ids":["https://openalex.org/I28407311","https://openalex.org/I87074743"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5018750491","display_name":"Jacob Carter","orcid":"https://orcid.org/0000-0001-6875-1271"},"institutions":[{"id":"https://openalex.org/I28407311","display_name":"University of Manchester","ror":"https://ror.org/027m9bs27","country_code":"GB","type":"education","lineage":["https://openalex.org/I28407311"]},{"id":"https://openalex.org/I87074743","display_name":"University of the Philippines Diliman","ror":"https://ror.org/03tbh6y23","country_code":"PH","type":"education","lineage":["https://openalex.org/I103911934","https://openalex.org/I87074743"]}],"countries":["GB","PH"],"is_corresponding":false,"raw_author_name":"Jacob Carter","raw_affiliation_strings":["National Centre for Text Mining, School of Computer Science, University of Manchester, UK and 2Department of Computer Science, University of the Philippines Diliman, Philippines"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"National Centre for Text Mining, School of Computer Science, University of Manchester, UK and 2Department of Computer Science, University of the Philippines Diliman, Philippines","institution_ids":["https://openalex.org/I28407311","https://openalex.org/I87074743"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5077976343","display_name":"Sophia Ananiadou","orcid":"https://orcid.org/0000-0002-4097-9191"},"institutions":[{"id":"https://openalex.org/I28407311","display_name":"University of Manchester","ror":"https://ror.org/027m9bs27","country_code":"GB","type":"education","lineage":["https://openalex.org/I28407311"]},{"id":"https://openalex.org/I87074743","display_name":"University of the Philippines Diliman","ror":"https://ror.org/03tbh6y23","country_code":"PH","type":"education","lineage":["https://openalex.org/I103911934","https://openalex.org/I87074743"]}],"countries":["GB","PH"],"is_corresponding":false,"raw_author_name":"Sophia Ananiadou","raw_affiliation_strings":["National Centre for Text Mining, School of Computer Science, University of Manchester, UK and 2Department of Computer Science, University of the Philippines Diliman, Philippines"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"National Centre for Text Mining, School of Computer Science, University of Manchester, UK and 2Department of Computer Science, University of the Philippines Diliman, Philippines","institution_ids":["https://openalex.org/I28407311","https://openalex.org/I87074743"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":2,"corresponding_author_ids":["https://openalex.org/A5071577126"],"corresponding_institution_ids":["https://openalex.org/I28407311","https://openalex.org/I87074743"],"apc_list":{"value":1415,"currency":"GBP","value_usd":1735},"apc_paid":{"value":1172,"currency":"EUR","value_usd":1264},"fwci":1.8201,"has_fulltext":false,"cited_by_count":23,"citation_normalized_percentile":{"value":0.85436713,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":98},"biblio":{"volume":"2014","issue":null,"first_page":null,"last_page":null},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9997000098228455,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9997000098228455,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10215","display_name":"Semantic Web and Ontologies","score":0.9846000075340271,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T11986","display_name":"Scientific Computing and Data Management","score":0.9473000168800354,"subfield":{"id":"https://openalex.org/subfields/1802","display_name":"Information Systems and Management"},"field":{"id":"https://openalex.org/fields/18","display_name":"Decision Sciences"},"domain":{"id":"https://openalex.org/domains/2","display_name":"Social Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/workflow","display_name":"Workflow","score":0.727780818939209},{"id":"https://openalex.org/keywords/argo","display_name":"Argo","score":0.6511287093162537},{"id":"https://openalex.org/keywords/world-wide-web","display_name":"World Wide Web","score":0.58268141746521},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.5536009669303894},{"id":"https://openalex.org/keywords/information-retrieval","display_name":"Information retrieval","score":0.4147273302078247},{"id":"https://openalex.org/keywords/library-science","display_name":"Library science","score":0.39237457513809204},{"id":"https://openalex.org/keywords/data-science","display_name":"Data science","score":0.3604971766471863},{"id":"https://openalex.org/keywords/database","display_name":"Database","score":0.19399785995483398}],"concepts":[{"id":"https://openalex.org/C177212765","wikidata":"https://www.wikidata.org/wiki/Q627335","display_name":"Workflow","level":2,"score":0.727780818939209},{"id":"https://openalex.org/C51614570","wikidata":"https://www.wikidata.org/wiki/Q647931","display_name":"Argo","level":2,"score":0.6511287093162537},{"id":"https://openalex.org/C136764020","wikidata":"https://www.wikidata.org/wiki/Q466","display_name":"World Wide Web","level":1,"score":0.58268141746521},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.5536009669303894},{"id":"https://openalex.org/C23123220","wikidata":"https://www.wikidata.org/wiki/Q816826","display_name":"Information retrieval","level":1,"score":0.4147273302078247},{"id":"https://openalex.org/C161191863","wikidata":"https://www.wikidata.org/wiki/Q199655","display_name":"Library science","level":1,"score":0.39237457513809204},{"id":"https://openalex.org/C2522767166","wikidata":"https://www.wikidata.org/wiki/Q2374463","display_name":"Data science","level":1,"score":0.3604971766471863},{"id":"https://openalex.org/C77088390","wikidata":"https://www.wikidata.org/wiki/Q8513","display_name":"Database","level":1,"score":0.19399785995483398},{"id":"https://openalex.org/C111368507","wikidata":"https://www.wikidata.org/wiki/Q43518","display_name":"Oceanography","level":1,"score":0.0},{"id":"https://openalex.org/C127313418","wikidata":"https://www.wikidata.org/wiki/Q1069","display_name":"Geology","level":0,"score":0.0}],"mesh":[{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D013997","descriptor_name":"Time Factors","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D013997","descriptor_name":"Time Factors","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D013997","descriptor_name":"Time Factors","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D057225","descriptor_name":"Data Mining","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D057225","descriptor_name":"Data Mining","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D057225","descriptor_name":"Data Mining","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D058977","descriptor_name":"Molecular Sequence Annotation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D058977","descriptor_name":"Molecular Sequence Annotation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D058977","descriptor_name":"Molecular Sequence Annotation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D066289","descriptor_name":"Data Curation","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D066289","descriptor_name":"Data Curation","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D066289","descriptor_name":"Data Curation","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false}],"locations_count":5,"locations":[{"id":"doi:10.1093/database/bau070","is_oa":true,"landing_page_url":"https://doi.org/10.1093/database/bau070","pdf_url":"https://academic.oup.com/database/article-pdf/doi/10.1093/database/bau070/17472907/bau070.pdf","source":{"id":"https://openalex.org/S4210201630","display_name":"Database","issn_l":"1758-0463","issn":["1758-0463"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311647","host_organization_name":"University of Oxford","host_organization_lineage":["https://openalex.org/P4310311647"],"host_organization_lineage_names":["University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Database","raw_type":"journal-article"},{"id":"pmid:25037308","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/25037308","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Database : the journal of biological databases and curation","raw_type":null},{"id":"pmh:oai:pure.atira.dk:openaire_cris_publications/b31a7913-4afc-4ddb-912c-1117b25f9a14","is_oa":true,"landing_page_url":"https://research.manchester.ac.uk/en/publications/b31a7913-4afc-4ddb-912c-1117b25f9a14","pdf_url":null,"source":{"id":"https://openalex.org/S4306400662","display_name":"Research Explorer (The University of Manchester)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I28407311","host_organization_name":"University of Manchester","host_organization_lineage":["https://openalex.org/I28407311"],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Rak, R, Batista-Navarro, R T, Rowley, A, Carter, J & Ananiadou, S 2014, 'Text Mining-assisted Biocuration Workflows in Argo', Database, pp. 1\u201314. https://doi.org/10.1093/database/bau070","raw_type":"info:eu-repo/semantics/article"},{"id":"pmh:oai:europepmc.org:3074269","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/4103424","pdf_url":null,"source":{"id":"https://openalex.org/S4306400806","display_name":"Europe PMC (PubMed Central)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1303153112","host_organization_name":"European Bioinformatics Institute","host_organization_lineage":["https://openalex.org/I1303153112"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Text"},{"id":"pmh:oai:pure.atira.dk:publications/b31a7913-4afc-4ddb-912c-1117b25f9a14","is_oa":true,"landing_page_url":"http://database.oxfordjournals.org/content/2014/bau070.abstract?keytype=ref&ijkey=3YjJLwDrKIfX6Kj","pdf_url":null,"source":{"id":"https://openalex.org/S4306400662","display_name":"Research Explorer (The University of Manchester)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I28407311","host_organization_name":"University of Manchester","host_organization_lineage":["https://openalex.org/I28407311"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Rak, R, Batista-Navarro, R T, Rowley, A, Carter, J & Ananiadou, S 2014, 'Text Mining-assisted Biocuration Workflows in Argo', Database, pp. 1\u201314. https://doi.org/10.1093/database/bau070","raw_type":"info:eu-repo/semantics/article"}],"best_oa_location":{"id":"doi:10.1093/database/bau070","is_oa":true,"landing_page_url":"https://doi.org/10.1093/database/bau070","pdf_url":"https://academic.oup.com/database/article-pdf/doi/10.1093/database/bau070/17472907/bau070.pdf","source":{"id":"https://openalex.org/S4210201630","display_name":"Database","issn_l":"1758-0463","issn":["1758-0463"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311647","host_organization_name":"University of Oxford","host_organization_lineage":["https://openalex.org/P4310311647"],"host_organization_lineage_names":["University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Database","raw_type":"journal-article"},"sustainable_development_goals":[{"display_name":"Industry, innovation and infrastructure","score":0.4699999988079071,"id":"https://metadata.un.org/sdg/9"}],"awards":[{"id":"https://openalex.org/G4793955247","display_name":null,"funder_award_id":"BB/G53025X/1","funder_id":"https://openalex.org/F4320334629","funder_display_name":"Biotechnology and Biological Sciences Research Council"},{"id":"https://openalex.org/G64586531","display_name":"From text to pathways: text mining techniques for reconstructing signalling pathways","funder_award_id":"BB/G53025X/1","funder_id":"https://openalex.org/F4320334629","funder_display_name":"Biotechnology and Biological Sciences Research Council"}],"funders":[{"id":"https://openalex.org/F4320311904","display_name":"Wellcome Trust","ror":"https://ror.org/029chgv08"},{"id":"https://openalex.org/F4320334629","display_name":"Biotechnology and Biological Sciences Research Council","ror":"https://ror.org/00cwqg982"}],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":58,"referenced_works":["https://openalex.org/W122891110","https://openalex.org/W192665053","https://openalex.org/W228455001","https://openalex.org/W1601495365","https://openalex.org/W1965893653","https://openalex.org/W1977289091","https://openalex.org/W1989263028","https://openalex.org/W1994086054","https://openalex.org/W2009033874","https://openalex.org/W2009433284","https://openalex.org/W2028133290","https://openalex.org/W2032729847","https://openalex.org/W2034190452","https://openalex.org/W2053673723","https://openalex.org/W2069024774","https://openalex.org/W2089988218","https://openalex.org/W2094726706","https://openalex.org/W2096797897","https://openalex.org/W2097678794","https://openalex.org/W2098166827","https://openalex.org/W2099701465","https://openalex.org/W2102160502","https://openalex.org/W2108723491","https://openalex.org/W2110408238","https://openalex.org/W2114363816","https://openalex.org/W2120754707","https://openalex.org/W2123280311","https://openalex.org/W2124772738","https://openalex.org/W2127239015","https://openalex.org/W2128601422","https://openalex.org/W2129592938","https://openalex.org/W2131848047","https://openalex.org/W2135118172","https://openalex.org/W2139259976","https://openalex.org/W2140611297","https://openalex.org/W2146486983","https://openalex.org/W2162639576","https://openalex.org/W2213189003","https://openalex.org/W2251230026","https://openalex.org/W2251431888","https://openalex.org/W2605068739","https://openalex.org/W2738658885","https://openalex.org/W2795785070","https://openalex.org/W2914431807","https://openalex.org/W4237293127","https://openalex.org/W4247554111","https://openalex.org/W4255855797","https://openalex.org/W4300022934","https://openalex.org/W6607694240","https://openalex.org/W6635610719","https://openalex.org/W6653073411","https://openalex.org/W6677050939","https://openalex.org/W6678739045","https://openalex.org/W6683714302","https://openalex.org/W6688337372","https://openalex.org/W6691291812","https://openalex.org/W6691331089","https://openalex.org/W6749665284"],"related_works":["https://openalex.org/W2748952813","https://openalex.org/W2387843509","https://openalex.org/W2350258974","https://openalex.org/W1951405128","https://openalex.org/W2349846593","https://openalex.org/W2916736012","https://openalex.org/W2917928156","https://openalex.org/W2916920068","https://openalex.org/W2918117023","https://openalex.org/W2893821991"],"abstract_inverted_index":{"Biocuration":[0],"activities":[1],"have":[2,32,51,216,255,282],"been":[3,29,52,284],"broadly":[4],"categorized":[5],"into":[6,54],"the":[7,12,24,38,44,62,73,82,111,118,148,177,188,198,217,232,235,239,241,246,251,257,264],"selection":[8],"of":[9,14,17,21,40,64,75,84,117,151,179,190,224,226,234,259,277,280],"relevant":[10],"documents,":[11],"annotation":[13,108],"biological":[15],"concepts":[16],"interest":[18],"and":[19,47,145,157,173,274],"identification":[20],"interactions":[22],"between":[23],"concepts.":[25],"Text":[26],"mining":[27],"has":[28],"shown":[30],"to":[31,35,57,87,100,124,205,215,270],"a":[33,66,76],"potential":[34],"significantly":[36],"reduce":[37],"effort":[39],"biocurators":[41],"in":[42,128,197,222,263],"all":[43],"three":[45],"activities,":[46,194],"various":[48],"semi-automatic":[49],"methodologies":[50],"integrated":[53],"curation":[55,193],"pipelines":[56],"support":[58,160],"them.":[59],"We":[60],"investigate":[61],"suitability":[63,189],"Argo,":[65],"workbench":[67,236],"for":[68,81,192],"building":[69],"text-mining":[70],"solutions":[71],"with":[72,181],"use":[74],"rich":[77],"graphical":[78],"user":[79],"interface,":[80],"process":[83],"biocuration.":[85],"Central":[86],"Argo":[88,180,191,213],"are":[89],"customizable":[90],"workflows":[91],"that":[92,159],"users":[93,123],"compose":[94],"by":[95,138],"arranging":[96],"available":[97],"elementary":[98],"analytics":[99],"form":[101],"task-specific":[102],"processing":[103,140],"units.":[104],"A":[105],"built-in":[106],"manual":[107],"editor":[109],"is":[110],"single":[112],"most":[113],"used":[114],"biocuration":[115,211,228],"tool":[116],"workbench,":[119],"as":[120,130,132,162,164,170],"it":[121],"allows":[122],"create":[125],"annotations":[126,136],"directly":[127],"text,":[129],"well":[131,163],"modify":[133],"or":[134,184],"delete":[135],"created":[137],"automatic":[139],"components.":[141],"Apart":[142],"from":[143],"syntactic":[144],"semantic":[146],"analytics,":[147],"ever-growing":[149],"library":[150],"components":[152],"includes":[153],"several":[154],"data":[155,166],"readers":[156],"consumers":[158],"well-established":[161],"emerging":[165],"interchange":[167],"formats":[168],"such":[169],"XMI,":[171],"RDF":[172],"BioC,":[174],"which":[175,253,281],"facilitate":[176],"interoperability":[178],"other":[182,220],"platforms":[183],"resources.":[185],"To":[186],"validate":[187],"we":[195],"participated":[196],"BioCreative":[199],"IV":[200],"challenge":[201,265],"whose":[202],"purpose":[203],"was":[204],"evaluate":[206],"Web-based":[207],"systems":[208,221],"addressing":[209],"user-defined":[210],"tasks.":[212,229],"proved":[214],"edge":[218],"over":[219],"terms":[223],"flexibility":[225],"defining":[227],"As":[230],"expected,":[231],"versatility":[233],"inevitably":[237],"lengthened":[238],"time":[240],"curators":[242],"spent":[243],"on":[244,250],"learning":[245],"system":[247],"before":[248],"taking":[249],"task,":[252],"may":[254],"affected":[256],"usability":[258],"Argo.":[260],"The":[261],"participation":[262],"gave":[266],"us":[267],"an":[268],"opportunity":[269],"gather":[271],"valuable":[272],"feedback":[273],"identify":[275],"areas":[276],"improvement,":[278],"some":[279],"already":[283],"introduced.":[285],"Database":[286],"URL:":[287],"http://argo.nactem.ac.uk.":[288]},"counts_by_year":[{"year":2025,"cited_by_count":1},{"year":2023,"cited_by_count":1},{"year":2022,"cited_by_count":2},{"year":2020,"cited_by_count":1},{"year":2019,"cited_by_count":1},{"year":2018,"cited_by_count":3},{"year":2017,"cited_by_count":4},{"year":2016,"cited_by_count":5},{"year":2015,"cited_by_count":3},{"year":2014,"cited_by_count":2}],"updated_date":"2026-08-01T09:00:35.917206","created_date":"2025-10-10T00:00:00"}
