{"id":"https://openalex.org/W2098229525","doi":"https://doi.org/10.1093/database/bat075","title":"Tripal v1.1: a standards-based toolkit for construction of online genetic and genomic databases","display_name":"Tripal v1.1: a standards-based toolkit for construction of online genetic and genomic databases","publication_year":2013,"publication_date":"2013-01-01","ids":{"openalex":"https://openalex.org/W2098229525","doi":"https://doi.org/10.1093/database/bat075","mag":"2098229525","pmid":"https://pubmed.ncbi.nlm.nih.gov/24163125"},"language":"en","primary_location":{"id":"doi:10.1093/database/bat075","is_oa":true,"landing_page_url":"https://doi.org/10.1093/database/bat075","pdf_url":null,"source":{"id":"https://openalex.org/S4210201630","display_name":"Database","issn_l":"1758-0463","issn":["1758-0463"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311647","host_organization_name":"University of Oxford","host_organization_lineage":["https://openalex.org/P4310311647"],"host_organization_lineage_names":["University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Database","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://doi.org/10.1093/database/bat075","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5016623344","display_name":"Lacey-Anne Sanderson","orcid":"https://orcid.org/0000-0002-0149-2217"},"institutions":[{"id":"https://openalex.org/I8078737","display_name":"Clemson University","ror":"https://ror.org/037s24f05","country_code":"US","type":"education","lineage":["https://openalex.org/I8078737"]},{"id":"https://openalex.org/I32625721","display_name":"University of Saskatchewan","ror":"https://ror.org/010x8gc63","country_code":"CA","type":"education","lineage":["https://openalex.org/I32625721"]},{"id":"https://openalex.org/I72951846","display_name":"Washington State University","ror":"https://ror.org/05dk0ce17","country_code":"US","type":"education","lineage":["https://openalex.org/I72951846"]}],"countries":["CA","US"],"is_corresponding":true,"raw_author_name":"Lacey-Anne Sanderson","raw_affiliation_strings":["Department of Plant Sciences, University of Saskatchewan. Saskatoon, SK Canada, 2Department of Horticulture, Washington State University. Pullman, WA, USA and 3Department of Genetics and Biochemistry, Clemson University. Clemson, SC, USA"],"affiliations":[{"raw_affiliation_string":"Department of Plant Sciences, University of Saskatchewan. Saskatoon, SK Canada, 2Department of Horticulture, Washington State University. Pullman, WA, USA and 3Department of Genetics and Biochemistry, Clemson University. Clemson, SC, USA","institution_ids":["https://openalex.org/I32625721","https://openalex.org/I8078737","https://openalex.org/I72951846"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5015114586","display_name":"Stephen Ficklin","orcid":"https://orcid.org/0000-0001-9138-6292"},"institutions":[{"id":"https://openalex.org/I8078737","display_name":"Clemson University","ror":"https://ror.org/037s24f05","country_code":"US","type":"education","lineage":["https://openalex.org/I8078737"]},{"id":"https://openalex.org/I72951846","display_name":"Washington State University","ror":"https://ror.org/05dk0ce17","country_code":"US","type":"education","lineage":["https://openalex.org/I72951846"]},{"id":"https://openalex.org/I32625721","display_name":"University of Saskatchewan","ror":"https://ror.org/010x8gc63","country_code":"CA","type":"education","lineage":["https://openalex.org/I32625721"]}],"countries":["CA","US"],"is_corresponding":false,"raw_author_name":"Stephen P. Ficklin","raw_affiliation_strings":["Department of Plant Sciences, University of Saskatchewan. Saskatoon, SK Canada, 2Department of Horticulture, Washington State University. Pullman, WA, USA and 3Department of Genetics and Biochemistry, Clemson University. Clemson, SC, USA","1Department of Plant Sciences, University of Saskatchewan. Saskatoon, SK Canada, 2Department of Horticulture, Washington State University. Pullman, WA, USA and 3Department of Genetics and Biochemistry, Clemson University. Clemson, SC, USA"],"affiliations":[{"raw_affiliation_string":"Department of Plant Sciences, University of Saskatchewan. Saskatoon, SK Canada, 2Department of Horticulture, Washington State University. Pullman, WA, USA and 3Department of Genetics and Biochemistry, Clemson University. Clemson, SC, USA","institution_ids":["https://openalex.org/I32625721","https://openalex.org/I8078737","https://openalex.org/I72951846"]},{"raw_affiliation_string":"1Department of Plant Sciences, University of Saskatchewan. Saskatoon, SK Canada, 2Department of Horticulture, Washington State University. Pullman, WA, USA and 3Department of Genetics and Biochemistry, Clemson University. Clemson, SC, USA","institution_ids":["https://openalex.org/I72951846"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5113727607","display_name":"Chun-Huai Cheng","orcid":null},"institutions":[{"id":"https://openalex.org/I72951846","display_name":"Washington State University","ror":"https://ror.org/05dk0ce17","country_code":"US","type":"education","lineage":["https://openalex.org/I72951846"]},{"id":"https://openalex.org/I8078737","display_name":"Clemson University","ror":"https://ror.org/037s24f05","country_code":"US","type":"education","lineage":["https://openalex.org/I8078737"]},{"id":"https://openalex.org/I32625721","display_name":"University of Saskatchewan","ror":"https://ror.org/010x8gc63","country_code":"CA","type":"education","lineage":["https://openalex.org/I32625721"]}],"countries":["CA","US"],"is_corresponding":false,"raw_author_name":"Chun-Huai Cheng","raw_affiliation_strings":["Department of Plant Sciences, University of Saskatchewan. Saskatoon, SK Canada, 2Department of Horticulture, Washington State University. Pullman, WA, USA and 3Department of Genetics and Biochemistry, Clemson University. Clemson, SC, USA","1Department of Plant Sciences, University of Saskatchewan. Saskatoon, SK Canada, 2Department of Horticulture, Washington State University. Pullman, WA, USA and 3Department of Genetics and Biochemistry, Clemson University. Clemson, SC, USA"],"affiliations":[{"raw_affiliation_string":"Department of Plant Sciences, University of Saskatchewan. Saskatoon, SK Canada, 2Department of Horticulture, Washington State University. Pullman, WA, USA and 3Department of Genetics and Biochemistry, Clemson University. Clemson, SC, USA","institution_ids":["https://openalex.org/I32625721","https://openalex.org/I8078737","https://openalex.org/I72951846"]},{"raw_affiliation_string":"1Department of Plant Sciences, University of Saskatchewan. Saskatoon, SK Canada, 2Department of Horticulture, Washington State University. Pullman, WA, USA and 3Department of Genetics and Biochemistry, Clemson University. Clemson, SC, USA","institution_ids":["https://openalex.org/I72951846"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5000749878","display_name":"Sook Jung","orcid":"https://orcid.org/0000-0003-3968-2769"},"institutions":[{"id":"https://openalex.org/I32625721","display_name":"University of Saskatchewan","ror":"https://ror.org/010x8gc63","country_code":"CA","type":"education","lineage":["https://openalex.org/I32625721"]},{"id":"https://openalex.org/I8078737","display_name":"Clemson University","ror":"https://ror.org/037s24f05","country_code":"US","type":"education","lineage":["https://openalex.org/I8078737"]},{"id":"https://openalex.org/I72951846","display_name":"Washington State University","ror":"https://ror.org/05dk0ce17","country_code":"US","type":"education","lineage":["https://openalex.org/I72951846"]}],"countries":["CA","US"],"is_corresponding":false,"raw_author_name":"Sook Jung","raw_affiliation_strings":["Department of Plant Sciences, University of Saskatchewan. Saskatoon, SK Canada, 2Department of Horticulture, Washington State University. Pullman, WA, USA and 3Department of Genetics and Biochemistry, Clemson University. Clemson, SC, USA","1Department of Plant Sciences, University of Saskatchewan. Saskatoon, SK Canada, 2Department of Horticulture, Washington State University. Pullman, WA, USA and 3Department of Genetics and Biochemistry, Clemson University. Clemson, SC, USA"],"affiliations":[{"raw_affiliation_string":"Department of Plant Sciences, University of Saskatchewan. Saskatoon, SK Canada, 2Department of Horticulture, Washington State University. Pullman, WA, USA and 3Department of Genetics and Biochemistry, Clemson University. Clemson, SC, USA","institution_ids":["https://openalex.org/I32625721","https://openalex.org/I8078737","https://openalex.org/I72951846"]},{"raw_affiliation_string":"1Department of Plant Sciences, University of Saskatchewan. Saskatoon, SK Canada, 2Department of Horticulture, Washington State University. Pullman, WA, USA and 3Department of Genetics and Biochemistry, Clemson University. Clemson, SC, USA","institution_ids":["https://openalex.org/I72951846"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5021360029","display_name":"F. Alex Feltus","orcid":null},"institutions":[{"id":"https://openalex.org/I8078737","display_name":"Clemson University","ror":"https://ror.org/037s24f05","country_code":"US","type":"education","lineage":["https://openalex.org/I8078737"]},{"id":"https://openalex.org/I32625721","display_name":"University of Saskatchewan","ror":"https://ror.org/010x8gc63","country_code":"CA","type":"education","lineage":["https://openalex.org/I32625721"]},{"id":"https://openalex.org/I72951846","display_name":"Washington State University","ror":"https://ror.org/05dk0ce17","country_code":"US","type":"education","lineage":["https://openalex.org/I72951846"]}],"countries":["CA","US"],"is_corresponding":false,"raw_author_name":"Frank A. Feltus","raw_affiliation_strings":["Department of Plant Sciences, University of Saskatchewan. Saskatoon, SK Canada, 2Department of Horticulture, Washington State University. Pullman, WA, USA and 3Department of Genetics and Biochemistry, Clemson University. Clemson, SC, USA","1Department of Plant Sciences, University of Saskatchewan. Saskatoon, SK Canada, 2Department of Horticulture, Washington State University. Pullman, WA, USA and 3Department of Genetics and Biochemistry, Clemson University. Clemson, SC, USA"],"affiliations":[{"raw_affiliation_string":"Department of Plant Sciences, University of Saskatchewan. Saskatoon, SK Canada, 2Department of Horticulture, Washington State University. Pullman, WA, USA and 3Department of Genetics and Biochemistry, Clemson University. Clemson, SC, USA","institution_ids":["https://openalex.org/I32625721","https://openalex.org/I8078737","https://openalex.org/I72951846"]},{"raw_affiliation_string":"1Department of Plant Sciences, University of Saskatchewan. Saskatoon, SK Canada, 2Department of Horticulture, Washington State University. Pullman, WA, USA and 3Department of Genetics and Biochemistry, Clemson University. Clemson, SC, USA","institution_ids":["https://openalex.org/I72951846"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5011124979","display_name":"Kirstin E. Bett","orcid":"https://orcid.org/0000-0001-7959-6959"},"institutions":[{"id":"https://openalex.org/I72951846","display_name":"Washington State University","ror":"https://ror.org/05dk0ce17","country_code":"US","type":"education","lineage":["https://openalex.org/I72951846"]},{"id":"https://openalex.org/I32625721","display_name":"University of Saskatchewan","ror":"https://ror.org/010x8gc63","country_code":"CA","type":"education","lineage":["https://openalex.org/I32625721"]},{"id":"https://openalex.org/I8078737","display_name":"Clemson University","ror":"https://ror.org/037s24f05","country_code":"US","type":"education","lineage":["https://openalex.org/I8078737"]}],"countries":["CA","US"],"is_corresponding":false,"raw_author_name":"Kirstin E. Bett","raw_affiliation_strings":["Department of Plant Sciences, University of Saskatchewan. Saskatoon, SK Canada, 2Department of Horticulture, Washington State University. Pullman, WA, USA and 3Department of Genetics and Biochemistry, Clemson University. Clemson, SC, USA","1Department of Plant Sciences, University of Saskatchewan. Saskatoon, SK Canada, 2Department of Horticulture, Washington State University. Pullman, WA, USA and 3Department of Genetics and Biochemistry, Clemson University. Clemson, SC, USA"],"affiliations":[{"raw_affiliation_string":"Department of Plant Sciences, University of Saskatchewan. Saskatoon, SK Canada, 2Department of Horticulture, Washington State University. Pullman, WA, USA and 3Department of Genetics and Biochemistry, Clemson University. Clemson, SC, USA","institution_ids":["https://openalex.org/I32625721","https://openalex.org/I8078737","https://openalex.org/I72951846"]},{"raw_affiliation_string":"1Department of Plant Sciences, University of Saskatchewan. Saskatoon, SK Canada, 2Department of Horticulture, Washington State University. Pullman, WA, USA and 3Department of Genetics and Biochemistry, Clemson University. Clemson, SC, USA","institution_ids":["https://openalex.org/I72951846"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5045435393","display_name":"Dorrie Main","orcid":"https://orcid.org/0000-0002-1162-2724"},"institutions":[{"id":"https://openalex.org/I32625721","display_name":"University of Saskatchewan","ror":"https://ror.org/010x8gc63","country_code":"CA","type":"education","lineage":["https://openalex.org/I32625721"]},{"id":"https://openalex.org/I8078737","display_name":"Clemson University","ror":"https://ror.org/037s24f05","country_code":"US","type":"education","lineage":["https://openalex.org/I8078737"]},{"id":"https://openalex.org/I72951846","display_name":"Washington State University","ror":"https://ror.org/05dk0ce17","country_code":"US","type":"education","lineage":["https://openalex.org/I72951846"]}],"countries":["CA","US"],"is_corresponding":false,"raw_author_name":"Dorrie Main","raw_affiliation_strings":["Department of Plant Sciences, University of Saskatchewan. Saskatoon, SK Canada, 2Department of Horticulture, Washington State University. Pullman, WA, USA and 3Department of Genetics and Biochemistry, Clemson University. Clemson, SC, USA","1Department of Plant Sciences, University of Saskatchewan. Saskatoon, SK Canada, 2Department of Horticulture, Washington State University. Pullman, WA, USA and 3Department of Genetics and Biochemistry, Clemson University. Clemson, SC, USA"],"affiliations":[{"raw_affiliation_string":"Department of Plant Sciences, University of Saskatchewan. Saskatoon, SK Canada, 2Department of Horticulture, Washington State University. Pullman, WA, USA and 3Department of Genetics and Biochemistry, Clemson University. Clemson, SC, USA","institution_ids":["https://openalex.org/I32625721","https://openalex.org/I8078737","https://openalex.org/I72951846"]},{"raw_affiliation_string":"1Department of Plant Sciences, University of Saskatchewan. Saskatoon, SK Canada, 2Department of Horticulture, Washington State University. Pullman, WA, USA and 3Department of Genetics and Biochemistry, Clemson University. Clemson, SC, USA","institution_ids":["https://openalex.org/I72951846"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":7,"corresponding_author_ids":["https://openalex.org/A5016623344"],"corresponding_institution_ids":["https://openalex.org/I32625721","https://openalex.org/I72951846","https://openalex.org/I8078737"],"apc_list":{"value":1415,"currency":"GBP","value_usd":1735},"apc_paid":{"value":1415,"currency":"GBP","value_usd":1735},"fwci":1.7968,"has_fulltext":false,"cited_by_count":62,"citation_normalized_percentile":{"value":0.84952588,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":99},"biblio":{"volume":"2013","issue":null,"first_page":"bat075","last_page":"bat075"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.996999979019165,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.996999979019165,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T13937","display_name":"Genetics, Bioinformatics, and Biomedical Research","score":0.9922999739646912,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9783999919891357,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7694776654243469},{"id":"https://openalex.org/keywords/world-wide-web","display_name":"World Wide Web","score":0.6465665698051453},{"id":"https://openalex.org/keywords/python","display_name":"Python (programming language)","score":0.5975009799003601},{"id":"https://openalex.org/keywords/documentation","display_name":"Documentation","score":0.5563105940818787},{"id":"https://openalex.org/keywords/xml","display_name":"XML","score":0.510982871055603},{"id":"https://openalex.org/keywords/database","display_name":"Database","score":0.5067949891090393},{"id":"https://openalex.org/keywords/application-programming-interface","display_name":"Application programming interface","score":0.4744751751422882},{"id":"https://openalex.org/keywords/software","display_name":"Software","score":0.4509623646736145},{"id":"https://openalex.org/keywords/suite","display_name":"Suite","score":0.4385153651237488},{"id":"https://openalex.org/keywords/information-retrieval","display_name":"Information retrieval","score":0.4264151453971863},{"id":"https://openalex.org/keywords/file-format","display_name":"File format","score":0.42413246631622314},{"id":"https://openalex.org/keywords/interface","display_name":"Interface (matter)","score":0.41898152232170105}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7694776654243469},{"id":"https://openalex.org/C136764020","wikidata":"https://www.wikidata.org/wiki/Q466","display_name":"World Wide Web","level":1,"score":0.6465665698051453},{"id":"https://openalex.org/C519991488","wikidata":"https://www.wikidata.org/wiki/Q28865","display_name":"Python (programming language)","level":2,"score":0.5975009799003601},{"id":"https://openalex.org/C56666940","wikidata":"https://www.wikidata.org/wiki/Q788790","display_name":"Documentation","level":2,"score":0.5563105940818787},{"id":"https://openalex.org/C8797682","wikidata":"https://www.wikidata.org/wiki/Q2115","display_name":"XML","level":2,"score":0.510982871055603},{"id":"https://openalex.org/C77088390","wikidata":"https://www.wikidata.org/wiki/Q8513","display_name":"Database","level":1,"score":0.5067949891090393},{"id":"https://openalex.org/C99613125","wikidata":"https://www.wikidata.org/wiki/Q165194","display_name":"Application programming interface","level":2,"score":0.4744751751422882},{"id":"https://openalex.org/C2777904410","wikidata":"https://www.wikidata.org/wiki/Q7397","display_name":"Software","level":2,"score":0.4509623646736145},{"id":"https://openalex.org/C79581498","wikidata":"https://www.wikidata.org/wiki/Q1367530","display_name":"Suite","level":2,"score":0.4385153651237488},{"id":"https://openalex.org/C23123220","wikidata":"https://www.wikidata.org/wiki/Q816826","display_name":"Information retrieval","level":1,"score":0.4264151453971863},{"id":"https://openalex.org/C97250363","wikidata":"https://www.wikidata.org/wiki/Q235557","display_name":"File format","level":2,"score":0.42413246631622314},{"id":"https://openalex.org/C113843644","wikidata":"https://www.wikidata.org/wiki/Q901882","display_name":"Interface (matter)","level":4,"score":0.41898152232170105},{"id":"https://openalex.org/C129307140","wikidata":"https://www.wikidata.org/wiki/Q6795880","display_name":"Maximum bubble pressure method","level":3,"score":0.0},{"id":"https://openalex.org/C157915830","wikidata":"https://www.wikidata.org/wiki/Q2928001","display_name":"Bubble","level":2,"score":0.0},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.0},{"id":"https://openalex.org/C111919701","wikidata":"https://www.wikidata.org/wiki/Q9135","display_name":"Operating system","level":1,"score":0.0},{"id":"https://openalex.org/C95457728","wikidata":"https://www.wikidata.org/wiki/Q309","display_name":"History","level":0,"score":0.0},{"id":"https://openalex.org/C173608175","wikidata":"https://www.wikidata.org/wiki/Q232661","display_name":"Parallel computing","level":1,"score":0.0},{"id":"https://openalex.org/C166957645","wikidata":"https://www.wikidata.org/wiki/Q23498","display_name":"Archaeology","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D005838","descriptor_name":"Genotype","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D005838","descriptor_name":"Genotype","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D005838","descriptor_name":"Genotype","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D010944","descriptor_name":"Plants","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D010944","descriptor_name":"Plants","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D010944","descriptor_name":"Plants","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D011642","descriptor_name":"Publications","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011642","descriptor_name":"Publications","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011642","descriptor_name":"Publications","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012015","descriptor_name":"Reference Standards","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012015","descriptor_name":"Reference Standards","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012015","descriptor_name":"Reference Standards","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012639","descriptor_name":"Seeds","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D012639","descriptor_name":"Seeds","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D012639","descriptor_name":"Seeds","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014644","descriptor_name":"Genetic Variation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014644","descriptor_name":"Genetic Variation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014644","descriptor_name":"Genetic Variation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016678","descriptor_name":"Genome","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D016678","descriptor_name":"Genome","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D016678","descriptor_name":"Genome","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":"Q000592","qualifier_name":"standards","is_major_topic":false},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":"Q000592","qualifier_name":"standards","is_major_topic":false},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":"Q000592","qualifier_name":"standards","is_major_topic":false},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true}],"locations_count":3,"locations":[{"id":"doi:10.1093/database/bat075","is_oa":true,"landing_page_url":"https://doi.org/10.1093/database/bat075","pdf_url":null,"source":{"id":"https://openalex.org/S4210201630","display_name":"Database","issn_l":"1758-0463","issn":["1758-0463"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311647","host_organization_name":"University of Oxford","host_organization_lineage":["https://openalex.org/P4310311647"],"host_organization_lineage_names":["University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Database","raw_type":"journal-article"},{"id":"pmid:24163125","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/24163125","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Database : the journal of biological databases and curation","raw_type":null},{"id":"pmh:oai:europepmc.org:2796167","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/3808541","pdf_url":null,"source":{"id":"https://openalex.org/S4306400806","display_name":"Europe PMC (PubMed Central)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1303153112","host_organization_name":"European Bioinformatics Institute","host_organization_lineage":["https://openalex.org/I1303153112"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1093/database/bat075","is_oa":true,"landing_page_url":"https://doi.org/10.1093/database/bat075","pdf_url":null,"source":{"id":"https://openalex.org/S4210201630","display_name":"Database","issn_l":"1758-0463","issn":["1758-0463"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311647","host_organization_name":"University of Oxford","host_organization_lineage":["https://openalex.org/P4310311647"],"host_organization_lineage_names":["University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Database","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[],"funders":[{"id":"https://openalex.org/F4320306114","display_name":"U.S. Department of Agriculture","ror":"https://ror.org/01na82s61"}],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":34,"referenced_works":["https://openalex.org/W21744265","https://openalex.org/W1490553060","https://openalex.org/W1967204795","https://openalex.org/W2001338440","https://openalex.org/W2015968355","https://openalex.org/W2017586115","https://openalex.org/W2022296304","https://openalex.org/W2022366078","https://openalex.org/W2034819034","https://openalex.org/W2038251528","https://openalex.org/W2056554987","https://openalex.org/W2072285646","https://openalex.org/W2099753867","https://openalex.org/W2100895966","https://openalex.org/W2103017472","https://openalex.org/W2112466127","https://openalex.org/W2123060905","https://openalex.org/W2123171788","https://openalex.org/W2123724865","https://openalex.org/W2127640118","https://openalex.org/W2129246904","https://openalex.org/W2133579817","https://openalex.org/W2148200511","https://openalex.org/W2151397621","https://openalex.org/W2157302781","https://openalex.org/W2158714788","https://openalex.org/W2164085656","https://openalex.org/W2167865654","https://openalex.org/W2168465568","https://openalex.org/W2168670121","https://openalex.org/W2402793346","https://openalex.org/W2916408032","https://openalex.org/W4285719527","https://openalex.org/W6729378096"],"related_works":["https://openalex.org/W4231704780","https://openalex.org/W2341492732","https://openalex.org/W3187193180","https://openalex.org/W2083794993","https://openalex.org/W106542691","https://openalex.org/W1043756523","https://openalex.org/W2163718105","https://openalex.org/W1728281561","https://openalex.org/W1527758759","https://openalex.org/W2594604025"],"abstract_inverted_index":{"Tripal":[0,41,81,99,245],"is":[1],"an":[2,141],"open-source":[3],"freely":[4],"available":[5],"toolkit":[6],"for":[7,47,106,130,197],"construction":[8],"of":[9,20,45,55,80,133,163,166,193],"online":[10],"genomic":[11,85,92],"and":[12,37,53,91,96,100,122,158,210,223,232,237],"genetic":[13],"databases.":[14],"It":[15],"aims":[16],"to":[17,62,65,146,180,206],"facilitate":[18],"development":[19],"community-driven":[21],"biological":[22,87,134],"websites":[23],"by":[24],"integrating":[25],"the":[26,67,148,224,244],"GMOD":[27],"Chado":[28,51,195],"database":[29,52],"schema":[30],"with":[31,49],"Drupal,":[32],"a":[33,43,50,171,177,185],"popular":[34],"website":[35,246],"creation":[36],"content":[38,56],"management":[39],"software.":[40],"provides":[42],"suite":[44],"tools":[46,59,157],"interaction":[48],"display":[54],"therein.":[57],"The":[58],"are":[60,151,161],"designed":[61],"be":[63,74,138,241],"generic":[64,126],"support":[66,192],"various":[68],"ways":[69],"in":[70,76,184],"which":[71,136],"data":[72,150,182],"may":[73],"stored":[75,183],"Chado.":[77],"Previous":[78],"releases":[79],"have":[82],"supported":[83],"organisms,":[84],"libraries,":[86],"stocks,":[88],"stock":[89],"collections":[90],"features,":[93],"their":[94],"alignments":[95],"annotations.":[97],"Also,":[98],"its":[101],"extension":[102,235],"modules":[103,215,236],"provided":[104,129],"loaders":[105],"commonly":[107],"used":[108],"file":[109],"formats":[110],"such":[111],"as":[112],"FASTA,":[113],"GFF,":[114],"OBO,":[115],"GAF,":[116],"BLAST":[117],"XML,":[118],"KEGG":[119],"heir":[120],"files":[121],"InterProScan":[123],"XML.":[124],"Default":[125],"templates":[127],"were":[128],"common":[131],"views":[132],"data,":[135],"could":[137],"customized":[139],"using":[140],"open":[142],"Application":[143],"Programming":[144],"Interface":[145],"change":[147],"way":[149],"displayed.":[152],"Here,":[153],"we":[154],"report":[155],"additional":[156],"functionality":[159],"that":[160,175],"part":[162],"release":[164],"v1.1":[165],"Tripal.":[167],"These":[168],"include":[169],"(i)":[170],"new":[172,214],"bulk":[173],"loader":[174],"allows":[176],"site":[178,204],"curator":[179],"import":[181],"custom":[186],"tab":[187],"delimited":[188],"format;":[189],"(ii)":[190],"full":[191],"every":[194],"table":[196],"Drupal":[198],"Views":[199],"(a":[200],"powerful":[201],"tool":[202],"allowing":[203],"developers":[205],"construct":[207],"novel":[208],"displays":[209],"search":[211],"pages);":[212],"(iii)":[213],"including":[216],"'Feature":[217],"Map',":[218],"'Genetic',":[219],"'Publication',":[220],"'Project',":[221],"'Contact'":[222],"'Natural":[225],"Diversity'":[226],"modules.":[227],"Tutorials,":[228],"mailing":[229],"lists,":[230],"download":[231],"set-up":[233],"instructions,":[234],"other":[238],"documentation":[239],"can":[240],"found":[242],"at":[243,248],"located":[247],"http://tripal.info.":[249],"DATABASE":[250],"URL:":[251],"http://tripal.info/.":[252]},"counts_by_year":[{"year":2026,"cited_by_count":2},{"year":2025,"cited_by_count":1},{"year":2024,"cited_by_count":3},{"year":2023,"cited_by_count":5},{"year":2022,"cited_by_count":2},{"year":2021,"cited_by_count":8},{"year":2020,"cited_by_count":6},{"year":2019,"cited_by_count":9},{"year":2018,"cited_by_count":7},{"year":2017,"cited_by_count":7},{"year":2016,"cited_by_count":6},{"year":2015,"cited_by_count":2},{"year":2014,"cited_by_count":3},{"year":2013,"cited_by_count":1}],"updated_date":"2026-04-05T17:49:38.594831","created_date":"2025-10-10T00:00:00"}
