{"id":"https://openalex.org/W2142425999","doi":"https://doi.org/10.1093/database/bas050","title":"Using binary classification to prioritize and curate articles for the Comparative Toxicogenomics Database","display_name":"Using binary classification to prioritize and curate articles for the Comparative Toxicogenomics Database","publication_year":2012,"publication_date":"2012-12-05","ids":{"openalex":"https://openalex.org/W2142425999","doi":"https://doi.org/10.1093/database/bas050","mag":"2142425999","pmid":"https://pubmed.ncbi.nlm.nih.gov/23221176"},"language":"en","primary_location":{"id":"doi:10.1093/database/bas050","is_oa":true,"landing_page_url":"https://doi.org/10.1093/database/bas050","pdf_url":"https://academic.oup.com/database/article-pdf/doi/10.1093/database/bas050/1208885/bas050.pdf","source":{"id":"https://openalex.org/S4210201630","display_name":"Database","issn_l":"1758-0463","issn":["1758-0463"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311647","host_organization_name":"University of Oxford","host_organization_lineage":["https://openalex.org/P4310311647"],"host_organization_lineage_names":["University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Database","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://academic.oup.com/database/article-pdf/doi/10.1093/database/bas050/1208885/bas050.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5022872913","display_name":"Dina Vishnyakova","orcid":"https://orcid.org/0000-0001-9101-5993"},"institutions":[{"id":"https://openalex.org/I191685745","display_name":"Textron Systems (United Kingdom)","ror":"https://ror.org/04y75v050","country_code":"GB","type":"company","lineage":["https://openalex.org/I191685745","https://openalex.org/I44619346"]},{"id":"https://openalex.org/I4210098262","display_name":"Breakthrough","ror":"https://ror.org/00w4cxg78","country_code":"US","type":"company","lineage":["https://openalex.org/I4210098262"]}],"countries":["GB","US"],"is_corresponding":false,"raw_author_name":"D. Vishnyakova","raw_affiliation_strings":["Bibliomics and Text Mining Group, Geneva, Switzerland. dina.vishnyakova@hcuge.ch","Bibliomics and Text Mining Group, Geneva, Switzerland"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Bibliomics and Text Mining Group, Geneva, Switzerland. dina.vishnyakova@hcuge.ch","institution_ids":["https://openalex.org/I4210098262"]},{"raw_affiliation_string":"Bibliomics and Text Mining Group, Geneva, Switzerland","institution_ids":["https://openalex.org/I191685745"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5017034341","display_name":"Emilie Pasche","orcid":"https://orcid.org/0000-0002-9118-5762"},"institutions":[{"id":"https://openalex.org/I173439891","display_name":"HES-SO University of Applied Sciences and Arts Western Switzerland","ror":"https://ror.org/01xkakk17","country_code":"CH","type":"education","lineage":["https://openalex.org/I173439891"]}],"countries":["CH"],"is_corresponding":false,"raw_author_name":"E. Pasche","raw_affiliation_strings":["Bibliomics and Text Mining (BiTeM) Group, 2Division of Medical Information Sciences, University and University Hospitals of Geneva and 3Information sciences department, HES-SO//Geneva, Switzerland","1Bibliomics and Text Mining (BiTeM) Group, 2Division of Medical Information Sciences, University and University Hospitals of Geneva and 3Information sciences department, HES-SO//Geneva, Switzerland"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Bibliomics and Text Mining (BiTeM) Group, 2Division of Medical Information Sciences, University and University Hospitals of Geneva and 3Information sciences department, HES-SO//Geneva, Switzerland","institution_ids":["https://openalex.org/I173439891"]},{"raw_affiliation_string":"1Bibliomics and Text Mining (BiTeM) Group, 2Division of Medical Information Sciences, University and University Hospitals of Geneva and 3Information sciences department, HES-SO//Geneva, Switzerland","institution_ids":["https://openalex.org/I173439891"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5042384742","display_name":"Patrick Ruch","orcid":"https://orcid.org/0000-0002-3374-2962"},"institutions":[{"id":"https://openalex.org/I173439891","display_name":"HES-SO University of Applied Sciences and Arts Western Switzerland","ror":"https://ror.org/01xkakk17","country_code":"CH","type":"education","lineage":["https://openalex.org/I173439891"]}],"countries":["CH"],"is_corresponding":false,"raw_author_name":"P. Ruch","raw_affiliation_strings":["Bibliomics and Text Mining (BiTeM) Group, 2Division of Medical Information Sciences, University and University Hospitals of Geneva and 3Information sciences department, HES-SO//Geneva, Switzerland","1Bibliomics and Text Mining (BiTeM) Group, 2Division of Medical Information Sciences, University and University Hospitals of Geneva and 3Information sciences department, HES-SO//Geneva, Switzerland"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Bibliomics and Text Mining (BiTeM) Group, 2Division of Medical Information Sciences, University and University Hospitals of Geneva and 3Information sciences department, HES-SO//Geneva, Switzerland","institution_ids":["https://openalex.org/I173439891"]},{"raw_affiliation_string":"1Bibliomics and Text Mining (BiTeM) Group, 2Division of Medical Information Sciences, University and University Hospitals of Geneva and 3Information sciences department, HES-SO//Geneva, Switzerland","institution_ids":["https://openalex.org/I173439891"]}]}],"institutions":[],"countries_distinct_count":3,"institutions_distinct_count":3,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":{"value":1415,"currency":"GBP","value_usd":1735},"apc_paid":{"value":1415,"currency":"GBP","value_usd":1735},"fwci":0.5297,"has_fulltext":true,"cited_by_count":9,"citation_normalized_percentile":{"value":0.66018245,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":96},"biblio":{"volume":"2012","issue":"0","first_page":"bas050","last_page":"bas050"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9994999766349792,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9994999766349792,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12254","display_name":"Machine Learning in Bioinformatics","score":0.9868999719619751,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9728999733924866,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.8242966532707214},{"id":"https://openalex.org/keywords/information-retrieval","display_name":"Information retrieval","score":0.6789172291755676},{"id":"https://openalex.org/keywords/ranking","display_name":"Ranking (information retrieval)","score":0.5464117527008057},{"id":"https://openalex.org/keywords/pipeline","display_name":"Pipeline (software)","score":0.5436462759971619},{"id":"https://openalex.org/keywords/support-vector-machine","display_name":"Support vector machine","score":0.5424038767814636},{"id":"https://openalex.org/keywords/set","display_name":"Set (abstract data type)","score":0.4669042229652405},{"id":"https://openalex.org/keywords/binary-classification","display_name":"Binary classification","score":0.44982263445854187},{"id":"https://openalex.org/keywords/task","display_name":"Task (project management)","score":0.4411270022392273},{"id":"https://openalex.org/keywords/uniprot","display_name":"UniProt","score":0.4242340326309204},{"id":"https://openalex.org/keywords/interface","display_name":"Interface (matter)","score":0.4155370593070984},{"id":"https://openalex.org/keywords/database","display_name":"Database","score":0.3911924362182617},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.32005709409713745}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.8242966532707214},{"id":"https://openalex.org/C23123220","wikidata":"https://www.wikidata.org/wiki/Q816826","display_name":"Information retrieval","level":1,"score":0.6789172291755676},{"id":"https://openalex.org/C189430467","wikidata":"https://www.wikidata.org/wiki/Q7293293","display_name":"Ranking (information retrieval)","level":2,"score":0.5464117527008057},{"id":"https://openalex.org/C43521106","wikidata":"https://www.wikidata.org/wiki/Q2165493","display_name":"Pipeline (software)","level":2,"score":0.5436462759971619},{"id":"https://openalex.org/C12267149","wikidata":"https://www.wikidata.org/wiki/Q282453","display_name":"Support vector machine","level":2,"score":0.5424038767814636},{"id":"https://openalex.org/C177264268","wikidata":"https://www.wikidata.org/wiki/Q1514741","display_name":"Set (abstract data type)","level":2,"score":0.4669042229652405},{"id":"https://openalex.org/C66905080","wikidata":"https://www.wikidata.org/wiki/Q17005494","display_name":"Binary classification","level":3,"score":0.44982263445854187},{"id":"https://openalex.org/C2780451532","wikidata":"https://www.wikidata.org/wiki/Q759676","display_name":"Task (project management)","level":2,"score":0.4411270022392273},{"id":"https://openalex.org/C202264299","wikidata":"https://www.wikidata.org/wiki/Q905695","display_name":"UniProt","level":3,"score":0.4242340326309204},{"id":"https://openalex.org/C113843644","wikidata":"https://www.wikidata.org/wiki/Q901882","display_name":"Interface (matter)","level":4,"score":0.4155370593070984},{"id":"https://openalex.org/C77088390","wikidata":"https://www.wikidata.org/wiki/Q8513","display_name":"Database","level":1,"score":0.3911924362182617},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.32005709409713745},{"id":"https://openalex.org/C157915830","wikidata":"https://www.wikidata.org/wiki/Q2928001","display_name":"Bubble","level":2,"score":0.0},{"id":"https://openalex.org/C185592680","wikidata":"https://www.wikidata.org/wiki/Q2329","display_name":"Chemistry","level":0,"score":0.0},{"id":"https://openalex.org/C162324750","wikidata":"https://www.wikidata.org/wiki/Q8134","display_name":"Economics","level":0,"score":0.0},{"id":"https://openalex.org/C173608175","wikidata":"https://www.wikidata.org/wiki/Q232661","display_name":"Parallel computing","level":1,"score":0.0},{"id":"https://openalex.org/C129307140","wikidata":"https://www.wikidata.org/wiki/Q6795880","display_name":"Maximum bubble pressure method","level":3,"score":0.0},{"id":"https://openalex.org/C187736073","wikidata":"https://www.wikidata.org/wiki/Q2920921","display_name":"Management","level":1,"score":0.0},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.0},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.0},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.0}],"mesh":[{"descriptor_ui":"D010506","descriptor_name":"Periodicals as Topic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D010506","descriptor_name":"Periodicals as Topic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D010506","descriptor_name":"Periodicals as Topic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012660","descriptor_name":"Semantics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012660","descriptor_name":"Semantics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012660","descriptor_name":"Semantics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":"Q000145","qualifier_name":"classification","is_major_topic":false},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":"Q000145","qualifier_name":"classification","is_major_topic":false},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":"Q000145","qualifier_name":"classification","is_major_topic":false},{"descriptor_ui":"D043922","descriptor_name":"Toxicogenetics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D043922","descriptor_name":"Toxicogenetics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D043922","descriptor_name":"Toxicogenetics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D057188","descriptor_name":"Workflow","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D057188","descriptor_name":"Workflow","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D057188","descriptor_name":"Workflow","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D057225","descriptor_name":"Data Mining","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D057225","descriptor_name":"Data Mining","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D057225","descriptor_name":"Data Mining","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D058977","descriptor_name":"Molecular Sequence Annotation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D058977","descriptor_name":"Molecular Sequence Annotation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D058977","descriptor_name":"Molecular Sequence Annotation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D060388","descriptor_name":"Support Vector Machine","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D060388","descriptor_name":"Support Vector Machine","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D060388","descriptor_name":"Support Vector Machine","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":6,"locations":[{"id":"doi:10.1093/database/bas050","is_oa":true,"landing_page_url":"https://doi.org/10.1093/database/bas050","pdf_url":"https://academic.oup.com/database/article-pdf/doi/10.1093/database/bas050/1208885/bas050.pdf","source":{"id":"https://openalex.org/S4210201630","display_name":"Database","issn_l":"1758-0463","issn":["1758-0463"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311647","host_organization_name":"University of Oxford","host_organization_lineage":["https://openalex.org/P4310311647"],"host_organization_lineage_names":["University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Database","raw_type":"journal-article"},{"id":"pmid:23221176","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/23221176","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Database : the journal of biological databases and curation","raw_type":null},{"id":"pmh:oai:unige.ch:unige:32099","is_oa":true,"landing_page_url":"https://archive-ouverte.unige.ch/unige:32099","pdf_url":null,"source":{"id":"https://openalex.org/S4306402259","display_name":"Archive ouverte UNIGE (University of Geneva)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I114457229","host_organization_name":"University of Geneva","host_organization_lineage":["https://openalex.org/I114457229"],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"ISSN: 1758-0463","raw_type":"info:eu-repo/semantics/article"},{"id":"pmh:oai:doc.rero.ch:20130110150356-LQ","is_oa":false,"landing_page_url":null,"pdf_url":null,"source":{"id":"https://openalex.org/S4306402253","display_name":"RERO DOC (Universit\u00e4t Bern)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":null},{"id":"pmh:oai:hesso.tind.io:402","is_oa":false,"landing_page_url":"http://arodes.hes-so.ch/record/402","pdf_url":null,"source":{"id":"https://openalex.org/S4306402432","display_name":"ArODES (HES-SO (https://www.hes-so.ch/))","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I4210088449","host_organization_name":"HES-SO Gen\u00e8ve","host_organization_lineage":["https://openalex.org/I4210088449"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"http://arodes.hes-so.ch/record/402","raw_type":"Text"},{"id":"pmh:oai:pubmedcentral.nih.gov:3514750","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/3514750","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Database (Oxford)","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1093/database/bas050","is_oa":true,"landing_page_url":"https://doi.org/10.1093/database/bas050","pdf_url":"https://academic.oup.com/database/article-pdf/doi/10.1093/database/bas050/1208885/bas050.pdf","source":{"id":"https://openalex.org/S4210201630","display_name":"Database","issn_l":"1758-0463","issn":["1758-0463"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311647","host_organization_name":"University of Oxford","host_organization_lineage":["https://openalex.org/P4310311647"],"host_organization_lineage_names":["University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Database","raw_type":"journal-article"},"sustainable_development_goals":[{"id":"https://metadata.un.org/sdg/17","score":0.4699999988079071,"display_name":"Partnerships for the goals"}],"awards":[],"funders":[],"has_content":{"pdf":true,"grobid_xml":false},"content_urls":{"pdf":"https://content.openalex.org/works/W2142425999.pdf"},"referenced_works_count":13,"referenced_works":["https://openalex.org/W1484777458","https://openalex.org/W1970863518","https://openalex.org/W2004761926","https://openalex.org/W2074640468","https://openalex.org/W2097925108","https://openalex.org/W2105481534","https://openalex.org/W2114370860","https://openalex.org/W2115024484","https://openalex.org/W2126276057","https://openalex.org/W2134638889","https://openalex.org/W2137937634","https://openalex.org/W2141959870","https://openalex.org/W2153635508"],"related_works":["https://openalex.org/W2993777277","https://openalex.org/W2747895175","https://openalex.org/W2946583009","https://openalex.org/W2614669534","https://openalex.org/W2104406636","https://openalex.org/W2115788596","https://openalex.org/W2105512057","https://openalex.org/W2128801478","https://openalex.org/W4252625449","https://openalex.org/W2741028958"],"abstract_inverted_index":{"We":[0],"report":[1],"on":[2],"the":[3,31,34,76,132,149],"original":[4],"integration":[5,146],"of":[6,33,61,65,79,118,131],"an":[7,96],"automatic":[8],"text":[9],"categorization":[10],"pipeline,":[11],"so-called":[12],"ToxiCat":[13],"(Toxicogenomic":[14],"Categorizer),":[15],"that":[16],"we":[17],"developed":[18,108],"to":[19,28,56,71],"perform":[20],"biomedical":[21],"documents":[22],"classification":[23,48],"and":[24,114,121,126,141],"prioritization":[25],"in":[26],"order":[27],"speed":[29],"up":[30],"curation":[32],"Comparative":[35],"Toxicogenomics":[36],"Database":[37],"(CTD).":[38],"The":[39,81,128,144],"task":[40],"can":[41],"be":[42],"basically":[43],"described":[44],"as":[45,138],"a":[46,51,58,66,87,103,110,116,155],"binary":[47],"task,":[49],"where":[50],"scoring":[52],"function":[53,83],"is":[54,84,152],"used":[55,70],"rank":[57],"selected":[59],"set":[60,117],"articles.":[62,80],"Then":[63],"components":[64,120,130],"question-answering":[67],"system":[68],"are":[69,134],"extract":[72],"CTD-specific":[73],"annotations":[74],"from":[75],"ranked":[77],"list":[78],"ranking":[82],"generated":[85],"using":[86],"Support":[88],"Vector":[89],"Machine,":[90],"which":[91],"combines":[92],"three":[93],"main":[94,129],"modules:":[95],"information":[97],"retrieval":[98],"engine":[99],"for":[100,109,124,148],"MEDLINE":[101],"(EAGLi),":[102],"gene":[104],"normalization":[105],"service":[106],"(NormaGene)":[107],"previous":[111],"BioCreative":[112,150],"campaign":[113],"finally,":[115],"answering":[119],"entity":[122],"recognizer":[123],"diseases":[125],"chemicals.":[127],"pipeline":[133],"publicly":[135],"available":[136,153],"both":[137],"web":[139,142,156],"application":[140],"services.":[143],"specific":[145],"performed":[147],"competition":[151],"via":[154],"user":[157],"interface":[158],"at":[159],"http://pingu.unige.ch:8080/Toxicat.":[160]},"counts_by_year":[{"year":2023,"cited_by_count":1},{"year":2018,"cited_by_count":1},{"year":2017,"cited_by_count":1},{"year":2016,"cited_by_count":2},{"year":2015,"cited_by_count":1},{"year":2014,"cited_by_count":1},{"year":2013,"cited_by_count":2}],"updated_date":"2026-01-15T23:16:33.117629","created_date":"2025-10-10T00:00:00"}
