{"id":"https://openalex.org/W2137273296","doi":"https://doi.org/10.1093/database/bas030","title":"Assessment of community-submitted ontology annotations from a novel database-journal partnership","display_name":"Assessment of community-submitted ontology annotations from a novel database-journal partnership","publication_year":2012,"publication_date":"2012-08-01","ids":{"openalex":"https://openalex.org/W2137273296","doi":"https://doi.org/10.1093/database/bas030","mag":"2137273296","pmid":"https://pubmed.ncbi.nlm.nih.gov/22859749"},"language":"en","primary_location":{"id":"doi:10.1093/database/bas030","is_oa":true,"landing_page_url":"https://doi.org/10.1093/database/bas030","pdf_url":"https://academic.oup.com/database/article-pdf/doi/10.1093/database/bas030/1199004/bas030.pdf","source":{"id":"https://openalex.org/S4210201630","display_name":"Database","issn_l":"1758-0463","issn":["1758-0463"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311647","host_organization_name":"University of Oxford","host_organization_lineage":["https://openalex.org/P4310311647"],"host_organization_lineage_names":["University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Database","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://academic.oup.com/database/article-pdf/doi/10.1093/database/bas030/1199004/bas030.pdf","any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5062305384","display_name":"Tanya Berardini","orcid":"https://orcid.org/0000-0002-3837-8864"},"institutions":[{"id":"https://openalex.org/I4210095419","display_name":"Department of Plant Biology","ror":"https://ror.org/00tdyb139","country_code":"US","type":"facility","lineage":["https://openalex.org/I196817621","https://openalex.org/I4210095419"]},{"id":"https://openalex.org/I196817621","display_name":"Carnegie Institution for Science","ror":"https://ror.org/04jr01610","country_code":"US","type":"funder","lineage":["https://openalex.org/I196817621"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"T. Z. Berardini","raw_affiliation_strings":["The Arabidopsis Information Resource, Department of Plant Biology, Carnegie Institution for Science, Stanford, CA 94305, USA"],"affiliations":[{"raw_affiliation_string":"The Arabidopsis Information Resource, Department of Plant Biology, Carnegie Institution for Science, Stanford, CA 94305, USA","institution_ids":["https://openalex.org/I196817621","https://openalex.org/I4210095419"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100336705","display_name":"Donghui Li","orcid":"https://orcid.org/0000-0003-3335-4537"},"institutions":[{"id":"https://openalex.org/I4210095419","display_name":"Department of Plant Biology","ror":"https://ror.org/00tdyb139","country_code":"US","type":"facility","lineage":["https://openalex.org/I196817621","https://openalex.org/I4210095419"]},{"id":"https://openalex.org/I196817621","display_name":"Carnegie Institution for Science","ror":"https://ror.org/04jr01610","country_code":"US","type":"funder","lineage":["https://openalex.org/I196817621"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"D. Li","raw_affiliation_strings":["The Arabidopsis Information Resource, Department of Plant Biology, Carnegie Institution for Science, Stanford, CA 94305, USA"],"affiliations":[{"raw_affiliation_string":"The Arabidopsis Information Resource, Department of Plant Biology, Carnegie Institution for Science, Stanford, CA 94305, USA","institution_ids":["https://openalex.org/I196817621","https://openalex.org/I4210095419"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5113493367","display_name":"Rudolf M\u00fcller","orcid":"https://orcid.org/0000-0002-4089-290X"},"institutions":[{"id":"https://openalex.org/I196817621","display_name":"Carnegie Institution for Science","ror":"https://ror.org/04jr01610","country_code":"US","type":"funder","lineage":["https://openalex.org/I196817621"]},{"id":"https://openalex.org/I4210095419","display_name":"Department of Plant Biology","ror":"https://ror.org/00tdyb139","country_code":"US","type":"facility","lineage":["https://openalex.org/I196817621","https://openalex.org/I4210095419"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"R. Muller","raw_affiliation_strings":["The Arabidopsis Information Resource, Department of Plant Biology, Carnegie Institution for Science, Stanford, CA 94305, USA"],"affiliations":[{"raw_affiliation_string":"The Arabidopsis Information Resource, Department of Plant Biology, Carnegie Institution for Science, Stanford, CA 94305, USA","institution_ids":["https://openalex.org/I196817621","https://openalex.org/I4210095419"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5044385376","display_name":"Runjan Chetty","orcid":"https://orcid.org/0000-0002-2124-515X"},"institutions":[{"id":"https://openalex.org/I4210095419","display_name":"Department of Plant Biology","ror":"https://ror.org/00tdyb139","country_code":"US","type":"facility","lineage":["https://openalex.org/I196817621","https://openalex.org/I4210095419"]},{"id":"https://openalex.org/I196817621","display_name":"Carnegie Institution for Science","ror":"https://ror.org/04jr01610","country_code":"US","type":"funder","lineage":["https://openalex.org/I196817621"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"R. Chetty","raw_affiliation_strings":["The Arabidopsis Information Resource, Department of Plant Biology, Carnegie Institution for Science, Stanford, CA 94305, USA"],"affiliations":[{"raw_affiliation_string":"The Arabidopsis Information Resource, Department of Plant Biology, Carnegie Institution for Science, Stanford, CA 94305, USA","institution_ids":["https://openalex.org/I196817621","https://openalex.org/I4210095419"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5047384801","display_name":"L. Ploetz","orcid":null},"institutions":[{"id":"https://openalex.org/I196817621","display_name":"Carnegie Institution for Science","ror":"https://ror.org/04jr01610","country_code":"US","type":"funder","lineage":["https://openalex.org/I196817621"]},{"id":"https://openalex.org/I4210095419","display_name":"Department of Plant Biology","ror":"https://ror.org/00tdyb139","country_code":"US","type":"facility","lineage":["https://openalex.org/I196817621","https://openalex.org/I4210095419"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"L. Ploetz","raw_affiliation_strings":["The Arabidopsis Information Resource, Department of Plant Biology, Carnegie Institution for Science, Stanford, CA 94305, USA"],"affiliations":[{"raw_affiliation_string":"The Arabidopsis Information Resource, Department of Plant Biology, Carnegie Institution for Science, Stanford, CA 94305, USA","institution_ids":["https://openalex.org/I196817621","https://openalex.org/I4210095419"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5003116693","display_name":"Sunil Kumar Singh","orcid":"https://orcid.org/0000-0001-9120-5279"},"institutions":[{"id":"https://openalex.org/I196817621","display_name":"Carnegie Institution for Science","ror":"https://ror.org/04jr01610","country_code":"US","type":"funder","lineage":["https://openalex.org/I196817621"]},{"id":"https://openalex.org/I4210095419","display_name":"Department of Plant Biology","ror":"https://ror.org/00tdyb139","country_code":"US","type":"facility","lineage":["https://openalex.org/I196817621","https://openalex.org/I4210095419"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"S. Singh","raw_affiliation_strings":["The Arabidopsis Information Resource, Department of Plant Biology, Carnegie Institution for Science, Stanford, CA 94305, USA"],"affiliations":[{"raw_affiliation_string":"The Arabidopsis Information Resource, Department of Plant Biology, Carnegie Institution for Science, Stanford, CA 94305, USA","institution_ids":["https://openalex.org/I196817621","https://openalex.org/I4210095419"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5081114586","display_name":"April Wensel","orcid":null},"institutions":[{"id":"https://openalex.org/I196817621","display_name":"Carnegie Institution for Science","ror":"https://ror.org/04jr01610","country_code":"US","type":"funder","lineage":["https://openalex.org/I196817621"]},{"id":"https://openalex.org/I4210095419","display_name":"Department of Plant Biology","ror":"https://ror.org/00tdyb139","country_code":"US","type":"facility","lineage":["https://openalex.org/I196817621","https://openalex.org/I4210095419"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"A. Wensel","raw_affiliation_strings":["The Arabidopsis Information Resource, Department of Plant Biology, Carnegie Institution for Science, Stanford, CA 94305, USA"],"affiliations":[{"raw_affiliation_string":"The Arabidopsis Information Resource, Department of Plant Biology, Carnegie Institution for Science, Stanford, CA 94305, USA","institution_ids":["https://openalex.org/I196817621","https://openalex.org/I4210095419"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5060484643","display_name":"Eva Huala","orcid":"https://orcid.org/0000-0003-4631-7241"},"institutions":[{"id":"https://openalex.org/I196817621","display_name":"Carnegie Institution for Science","ror":"https://ror.org/04jr01610","country_code":"US","type":"funder","lineage":["https://openalex.org/I196817621"]},{"id":"https://openalex.org/I4210095419","display_name":"Department of Plant Biology","ror":"https://ror.org/00tdyb139","country_code":"US","type":"facility","lineage":["https://openalex.org/I196817621","https://openalex.org/I4210095419"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"E. Huala","raw_affiliation_strings":["The Arabidopsis Information Resource, Department of Plant Biology, Carnegie Institution for Science, Stanford, CA 94305, USA"],"affiliations":[{"raw_affiliation_string":"The Arabidopsis Information Resource, Department of Plant Biology, Carnegie Institution for Science, Stanford, CA 94305, USA","institution_ids":["https://openalex.org/I196817621","https://openalex.org/I4210095419"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":8,"corresponding_author_ids":["https://openalex.org/A5062305384"],"corresponding_institution_ids":["https://openalex.org/I196817621","https://openalex.org/I4210095419"],"apc_list":{"value":1415,"currency":"GBP","value_usd":1735},"apc_paid":{"value":1415,"currency":"GBP","value_usd":1735},"fwci":3.4251,"has_fulltext":false,"cited_by_count":23,"citation_normalized_percentile":{"value":0.92858154,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":89,"max":98},"biblio":{"volume":"2012","issue":"0","first_page":"bas030","last_page":"bas030"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10215","display_name":"Semantic Web and Ontologies","score":0.9840999841690063,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T10215","display_name":"Semantic Web and Ontologies","score":0.9840999841690063,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9732000231742859,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12478","display_name":"Wikis in Education and Collaboration","score":0.9729999899864197,"subfield":{"id":"https://openalex.org/subfields/3315","display_name":"Communication"},"field":{"id":"https://openalex.org/fields/33","display_name":"Social Sciences"},"domain":{"id":"https://openalex.org/domains/2","display_name":"Social Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7204043865203857},{"id":"https://openalex.org/keywords/information-retrieval","display_name":"Information retrieval","score":0.6549218893051147},{"id":"https://openalex.org/keywords/general-partnership","display_name":"General partnership","score":0.6337686777114868},{"id":"https://openalex.org/keywords/ontology","display_name":"Ontology","score":0.6005649566650391},{"id":"https://openalex.org/keywords/database","display_name":"Database","score":0.4851880669593811},{"id":"https://openalex.org/keywords/world-wide-web","display_name":"World Wide Web","score":0.45100677013397217},{"id":"https://openalex.org/keywords/library-science","display_name":"Library science","score":0.34122931957244873},{"id":"https://openalex.org/keywords/political-science","display_name":"Political science","score":0.12228614091873169}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7204043865203857},{"id":"https://openalex.org/C23123220","wikidata":"https://www.wikidata.org/wiki/Q816826","display_name":"Information retrieval","level":1,"score":0.6549218893051147},{"id":"https://openalex.org/C71750763","wikidata":"https://www.wikidata.org/wiki/Q646164","display_name":"General partnership","level":2,"score":0.6337686777114868},{"id":"https://openalex.org/C25810664","wikidata":"https://www.wikidata.org/wiki/Q44325","display_name":"Ontology","level":2,"score":0.6005649566650391},{"id":"https://openalex.org/C77088390","wikidata":"https://www.wikidata.org/wiki/Q8513","display_name":"Database","level":1,"score":0.4851880669593811},{"id":"https://openalex.org/C136764020","wikidata":"https://www.wikidata.org/wiki/Q466","display_name":"World Wide Web","level":1,"score":0.45100677013397217},{"id":"https://openalex.org/C161191863","wikidata":"https://www.wikidata.org/wiki/Q199655","display_name":"Library science","level":1,"score":0.34122931957244873},{"id":"https://openalex.org/C17744445","wikidata":"https://www.wikidata.org/wiki/Q36442","display_name":"Political science","level":0,"score":0.12228614091873169},{"id":"https://openalex.org/C199539241","wikidata":"https://www.wikidata.org/wiki/Q7748","display_name":"Law","level":1,"score":0.0},{"id":"https://openalex.org/C138885662","wikidata":"https://www.wikidata.org/wiki/Q5891","display_name":"Philosophy","level":0,"score":0.0},{"id":"https://openalex.org/C111472728","wikidata":"https://www.wikidata.org/wiki/Q9471","display_name":"Epistemology","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D000043","descriptor_name":"Abstracting and Indexing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000043","descriptor_name":"Abstracting and Indexing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000043","descriptor_name":"Abstracting and Indexing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008962","descriptor_name":"Models, Theoretical","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008962","descriptor_name":"Models, Theoretical","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008962","descriptor_name":"Models, Theoretical","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D010506","descriptor_name":"Periodicals as Topic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D010506","descriptor_name":"Periodicals as Topic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D010506","descriptor_name":"Periodicals as Topic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016208","descriptor_name":"Databases, Factual","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016208","descriptor_name":"Databases, Factual","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016208","descriptor_name":"Databases, Factual","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D017360","descriptor_name":"Arabidopsis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D017360","descriptor_name":"Arabidopsis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D017360","descriptor_name":"Arabidopsis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D018875","descriptor_name":"Vocabulary, Controlled","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D018875","descriptor_name":"Vocabulary, Controlled","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D018875","descriptor_name":"Vocabulary, Controlled","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D058977","descriptor_name":"Molecular Sequence Annotation","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D058977","descriptor_name":"Molecular Sequence Annotation","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D058977","descriptor_name":"Molecular Sequence Annotation","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false}],"locations_count":3,"locations":[{"id":"doi:10.1093/database/bas030","is_oa":true,"landing_page_url":"https://doi.org/10.1093/database/bas030","pdf_url":"https://academic.oup.com/database/article-pdf/doi/10.1093/database/bas030/1199004/bas030.pdf","source":{"id":"https://openalex.org/S4210201630","display_name":"Database","issn_l":"1758-0463","issn":["1758-0463"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311647","host_organization_name":"University of Oxford","host_organization_lineage":["https://openalex.org/P4310311647"],"host_organization_lineage_names":["University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Database","raw_type":"journal-article"},{"id":"pmid:22859749","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/22859749","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Database : the journal of biological databases and curation","raw_type":null},{"id":"pmh:oai:europepmc.org:2416968","is_oa":false,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/3410254","pdf_url":null,"source":{"id":"https://openalex.org/S4306400806","display_name":"Europe PMC (PubMed Central)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1303153112","host_organization_name":"European Bioinformatics Institute","host_organization_lineage":["https://openalex.org/I1303153112"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1093/database/bas030","is_oa":true,"landing_page_url":"https://doi.org/10.1093/database/bas030","pdf_url":"https://academic.oup.com/database/article-pdf/doi/10.1093/database/bas030/1199004/bas030.pdf","source":{"id":"https://openalex.org/S4210201630","display_name":"Database","issn_l":"1758-0463","issn":["1758-0463"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311647","host_organization_name":"University of Oxford","host_organization_lineage":["https://openalex.org/P4310311647"],"host_organization_lineage_names":["University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Database","raw_type":"journal-article"},"sustainable_development_goals":[{"score":0.5799999833106995,"id":"https://metadata.un.org/sdg/17","display_name":"Partnerships for the goals"}],"awards":[],"funders":[],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2137273296.pdf","grobid_xml":"https://content.openalex.org/works/W2137273296.grobid-xml"},"referenced_works_count":22,"referenced_works":["https://openalex.org/W1236321187","https://openalex.org/W1951838230","https://openalex.org/W1969271108","https://openalex.org/W1987611631","https://openalex.org/W1995651858","https://openalex.org/W1998712940","https://openalex.org/W2000941677","https://openalex.org/W2041471741","https://openalex.org/W2052517822","https://openalex.org/W2091940856","https://openalex.org/W2096353329","https://openalex.org/W2096939566","https://openalex.org/W2104671755","https://openalex.org/W2106006432","https://openalex.org/W2106288120","https://openalex.org/W2120944447","https://openalex.org/W2124320575","https://openalex.org/W2125114313","https://openalex.org/W2131945425","https://openalex.org/W2134863337","https://openalex.org/W2146486983","https://openalex.org/W2168340032"],"related_works":["https://openalex.org/W2748952813","https://openalex.org/W2739852106","https://openalex.org/W585428044","https://openalex.org/W2578322776","https://openalex.org/W3092603343","https://openalex.org/W2378276451","https://openalex.org/W1986755814","https://openalex.org/W2507403529","https://openalex.org/W2004491036","https://openalex.org/W2094995007"],"abstract_inverted_index":{"As":[0],"the":[1,16,73,89,114,125,129,142,154,191],"scientific":[2],"literature":[3],"grows,":[4],"leading":[5],"to":[6,18,32,63,188],"an":[7,148],"increasing":[8],"volume":[9],"of":[10,83,92,107,124,151,169,194],"published":[11,34,65],"experimental":[12,35,178],"data,":[13],"so":[14],"does":[15],"need":[17],"access":[19],"and":[20,67,79,118,141,164],"analyze":[21],"this":[22],"data":[23,36,87],"using":[24,128],"computational":[25],"tools.":[26],"The":[27],"most":[28,135],"commonly":[29],"used":[30],"method":[31,175],"convert":[33],"on":[37,45,72],"gene":[38,85],"function":[39,86],"into":[40],"controlled":[41],"vocabulary":[42],"annotations":[43,109,137,157,195],"relies":[44],"a":[46,51,56,105,181,185],"professional":[47],"curator,":[48],"employed":[49],"by":[50],"model":[52],"organism":[53],"database":[54],"or":[55],"more":[57,77],"general":[58],"resource":[59],"such":[60],"as":[61],"UniProt,":[62],"read":[64],"articles":[66],"compose":[68],"annotation":[69,198],"statements":[70],"based":[71],"articles'":[74],"contents.":[75],"A":[76],"cost-effective":[78,186],"scalable":[80],"approach":[81],"capable":[82],"capturing":[84,177],"across":[88],"whole":[90],"range":[91],"biological":[93],"research":[94],"organisms":[95],"in":[96,180],"computable":[97,182],"form":[98,183],"is":[99],"urgently":[100],"needed.":[101],"We":[102],"have":[103],"analyzed":[104],"set":[106],"ontology":[108,143],"generated":[110],"through":[111],"collaborations":[112],"between":[113],"Arabidopsis":[115],"Information":[116],"Resource":[117],"several":[119],"plant":[120],"science":[121],"journals.":[122],"Analysis":[123],"submissions":[126,166],"entered":[127],"online":[130],"submission":[131],"tool":[132],"shows":[133],"that":[134,158],"community":[136,165],"were":[138,146,159,162],"well":[139],"supported":[140],"terms":[144],"chosen":[145],"at":[147],"appropriate":[149],"level":[150],"specificity.":[152],"Of":[153],"503":[155],"individual":[156],"submitted,":[160],"97%":[161],"approved":[163],"captured":[167],"72%":[168],"all":[170],"possible":[171],"annotations.":[172],"This":[173],"new":[174],"for":[176],"results":[179],"provides":[184],"way":[187],"greatly":[189],"increase":[190],"available":[192],"body":[193],"without":[196],"sacrificing":[197],"quality.":[199],"Database":[200],"URL:":[201],"www.arabidopsis.org.":[202]},"counts_by_year":[{"year":2025,"cited_by_count":2},{"year":2024,"cited_by_count":2},{"year":2023,"cited_by_count":1},{"year":2022,"cited_by_count":2},{"year":2020,"cited_by_count":1},{"year":2018,"cited_by_count":2},{"year":2017,"cited_by_count":1},{"year":2016,"cited_by_count":2},{"year":2015,"cited_by_count":1},{"year":2014,"cited_by_count":4},{"year":2013,"cited_by_count":1},{"year":2012,"cited_by_count":2}],"updated_date":"2026-01-13T01:12:25.745995","created_date":"2025-10-10T00:00:00"}
