{"id":"https://openalex.org/W2147641929","doi":"https://doi.org/10.1093/database/bas021","title":"Using ODIN for a PharmGKB revalidation experiment","display_name":"Using ODIN for a PharmGKB revalidation experiment","publication_year":2012,"publication_date":"2012-04-23","ids":{"openalex":"https://openalex.org/W2147641929","doi":"https://doi.org/10.1093/database/bas021","mag":"2147641929","pmid":"https://pubmed.ncbi.nlm.nih.gov/22529178"},"language":"en","primary_location":{"id":"doi:10.1093/database/bas021","is_oa":true,"landing_page_url":"https://doi.org/10.1093/database/bas021","pdf_url":"https://academic.oup.com/database/article-pdf/doi/10.1093/database/bas021/1196130/bas021.pdf","source":{"id":"https://openalex.org/S4210201630","display_name":"Database","issn_l":"1758-0463","issn":["1758-0463"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311647","host_organization_name":"University of Oxford","host_organization_lineage":["https://openalex.org/P4310311647"],"host_organization_lineage_names":["University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Database","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","datacite","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://academic.oup.com/database/article-pdf/doi/10.1093/database/bas021/1196130/bas021.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5025307528","display_name":"Fabio Rinaldi","orcid":"https://orcid.org/0000-0001-5718-5462"},"institutions":[{"id":"https://openalex.org/I202697423","display_name":"University of Zurich","ror":"https://ror.org/02crff812","country_code":"CH","type":"education","lineage":["https://openalex.org/I202697423"]},{"id":"https://openalex.org/I97018004","display_name":"Stanford University","ror":"https://ror.org/00f54p054","country_code":"US","type":"education","lineage":["https://openalex.org/I97018004"]}],"countries":["CH","US"],"is_corresponding":true,"raw_author_name":"F. Rinaldi","raw_affiliation_strings":["Institute of Computational Linguistics, Binzmuhlestrasse 171, 8050 Zurich, Switzerland. fabio.rinaldi@uzh.ch","Institute of Computational Linguistics. Binzmuhlestrasse 171, 8050 Zurich, Switzerland, 2Biomedical Informatics Program, 3Department of Genetics, 4Department of Bioengineering and 5Department of Medicine, Stanford University, 1501 California Avenue, Palo Alto, CA 94304"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Institute of Computational Linguistics, Binzmuhlestrasse 171, 8050 Zurich, Switzerland. fabio.rinaldi@uzh.ch","institution_ids":["https://openalex.org/I202697423"]},{"raw_affiliation_string":"Institute of Computational Linguistics. Binzmuhlestrasse 171, 8050 Zurich, Switzerland, 2Biomedical Informatics Program, 3Department of Genetics, 4Department of Bioengineering and 5Department of Medicine, Stanford University, 1501 California Avenue, Palo Alto, CA 94304","institution_ids":["https://openalex.org/I97018004"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5073027507","display_name":"Simon Clematide","orcid":"https://orcid.org/0000-0003-1365-0662"},"institutions":[{"id":"https://openalex.org/I97018004","display_name":"Stanford University","ror":"https://ror.org/00f54p054","country_code":"US","type":"education","lineage":["https://openalex.org/I97018004"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"S. Clematide","raw_affiliation_strings":["Institute of Computational Linguistics. Binzmuhlestrasse 171, 8050 Zurich, Switzerland, 2Biomedical Informatics Program, 3Department of Genetics, 4Department of Bioengineering and 5Department of Medicine, Stanford University, 1501 California Avenue, Palo Alto, CA 94304"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Institute of Computational Linguistics. Binzmuhlestrasse 171, 8050 Zurich, Switzerland, 2Biomedical Informatics Program, 3Department of Genetics, 4Department of Bioengineering and 5Department of Medicine, Stanford University, 1501 California Avenue, Palo Alto, CA 94304","institution_ids":["https://openalex.org/I97018004"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5007767486","display_name":"Yael Garten","orcid":null},"institutions":[{"id":"https://openalex.org/I97018004","display_name":"Stanford University","ror":"https://ror.org/00f54p054","country_code":"US","type":"education","lineage":["https://openalex.org/I97018004"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Y. Garten","raw_affiliation_strings":["Institute of Computational Linguistics. Binzmuhlestrasse 171, 8050 Zurich, Switzerland, 2Biomedical Informatics Program, 3Department of Genetics, 4Department of Bioengineering and 5Department of Medicine, Stanford University, 1501 California Avenue, Palo Alto, CA 94304"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Institute of Computational Linguistics. Binzmuhlestrasse 171, 8050 Zurich, Switzerland, 2Biomedical Informatics Program, 3Department of Genetics, 4Department of Bioengineering and 5Department of Medicine, Stanford University, 1501 California Avenue, Palo Alto, CA 94304","institution_ids":["https://openalex.org/I97018004"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5007419290","display_name":"Michelle Whirl\u2010Carrillo","orcid":"https://orcid.org/0000-0003-2414-9312"},"institutions":[{"id":"https://openalex.org/I97018004","display_name":"Stanford University","ror":"https://ror.org/00f54p054","country_code":"US","type":"education","lineage":["https://openalex.org/I97018004"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"M. Whirl-Carrillo","raw_affiliation_strings":["Institute of Computational Linguistics. Binzmuhlestrasse 171, 8050 Zurich, Switzerland, 2Biomedical Informatics Program, 3Department of Genetics, 4Department of Bioengineering and 5Department of Medicine, Stanford University, 1501 California Avenue, Palo Alto, CA 94304"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Institute of Computational Linguistics. Binzmuhlestrasse 171, 8050 Zurich, Switzerland, 2Biomedical Informatics Program, 3Department of Genetics, 4Department of Bioengineering and 5Department of Medicine, Stanford University, 1501 California Avenue, Palo Alto, CA 94304","institution_ids":["https://openalex.org/I97018004"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5044898317","display_name":"Li\u2010Hua Gong","orcid":"https://orcid.org/0000-0002-1180-3023"},"institutions":[{"id":"https://openalex.org/I97018004","display_name":"Stanford University","ror":"https://ror.org/00f54p054","country_code":"US","type":"education","lineage":["https://openalex.org/I97018004"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"L. Gong","raw_affiliation_strings":["Institute of Computational Linguistics. Binzmuhlestrasse 171, 8050 Zurich, Switzerland, 2Biomedical Informatics Program, 3Department of Genetics, 4Department of Bioengineering and 5Department of Medicine, Stanford University, 1501 California Avenue, Palo Alto, CA 94304"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Institute of Computational Linguistics. Binzmuhlestrasse 171, 8050 Zurich, Switzerland, 2Biomedical Informatics Program, 3Department of Genetics, 4Department of Bioengineering and 5Department of Medicine, Stanford University, 1501 California Avenue, Palo Alto, CA 94304","institution_ids":["https://openalex.org/I97018004"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5062220923","display_name":"Joan M. Hebert","orcid":null},"institutions":[{"id":"https://openalex.org/I97018004","display_name":"Stanford University","ror":"https://ror.org/00f54p054","country_code":"US","type":"education","lineage":["https://openalex.org/I97018004"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"J. M. Hebert","raw_affiliation_strings":["Institute of Computational Linguistics. Binzmuhlestrasse 171, 8050 Zurich, Switzerland, 2Biomedical Informatics Program, 3Department of Genetics, 4Department of Bioengineering and 5Department of Medicine, Stanford University, 1501 California Avenue, Palo Alto, CA 94304"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Institute of Computational Linguistics. Binzmuhlestrasse 171, 8050 Zurich, Switzerland, 2Biomedical Informatics Program, 3Department of Genetics, 4Department of Bioengineering and 5Department of Medicine, Stanford University, 1501 California Avenue, Palo Alto, CA 94304","institution_ids":["https://openalex.org/I97018004"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5072681827","display_name":"Katrin Sangkuhl","orcid":"https://orcid.org/0000-0001-7880-5843"},"institutions":[{"id":"https://openalex.org/I97018004","display_name":"Stanford University","ror":"https://ror.org/00f54p054","country_code":"US","type":"education","lineage":["https://openalex.org/I97018004"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"K. Sangkuhl","raw_affiliation_strings":["Institute of Computational Linguistics. Binzmuhlestrasse 171, 8050 Zurich, Switzerland, 2Biomedical Informatics Program, 3Department of Genetics, 4Department of Bioengineering and 5Department of Medicine, Stanford University, 1501 California Avenue, Palo Alto, CA 94304"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Institute of Computational Linguistics. Binzmuhlestrasse 171, 8050 Zurich, Switzerland, 2Biomedical Informatics Program, 3Department of Genetics, 4Department of Bioengineering and 5Department of Medicine, Stanford University, 1501 California Avenue, Palo Alto, CA 94304","institution_ids":["https://openalex.org/I97018004"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5067971315","display_name":"Caroline F. Thorn","orcid":"https://orcid.org/0000-0001-5789-5747"},"institutions":[{"id":"https://openalex.org/I97018004","display_name":"Stanford University","ror":"https://ror.org/00f54p054","country_code":"US","type":"education","lineage":["https://openalex.org/I97018004"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"C. F. Thorn","raw_affiliation_strings":["Institute of Computational Linguistics. Binzmuhlestrasse 171, 8050 Zurich, Switzerland, 2Biomedical Informatics Program, 3Department of Genetics, 4Department of Bioengineering and 5Department of Medicine, Stanford University, 1501 California Avenue, Palo Alto, CA 94304"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Institute of Computational Linguistics. Binzmuhlestrasse 171, 8050 Zurich, Switzerland, 2Biomedical Informatics Program, 3Department of Genetics, 4Department of Bioengineering and 5Department of Medicine, Stanford University, 1501 California Avenue, Palo Alto, CA 94304","institution_ids":["https://openalex.org/I97018004"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5079887236","display_name":"Teri E. Klein","orcid":"https://orcid.org/0000-0001-5527-6475"},"institutions":[{"id":"https://openalex.org/I97018004","display_name":"Stanford University","ror":"https://ror.org/00f54p054","country_code":"US","type":"education","lineage":["https://openalex.org/I97018004"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"T. E. Klein","raw_affiliation_strings":["Institute of Computational Linguistics. Binzmuhlestrasse 171, 8050 Zurich, Switzerland, 2Biomedical Informatics Program, 3Department of Genetics, 4Department of Bioengineering and 5Department of Medicine, Stanford University, 1501 California Avenue, Palo Alto, CA 94304"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Institute of Computational Linguistics. Binzmuhlestrasse 171, 8050 Zurich, Switzerland, 2Biomedical Informatics Program, 3Department of Genetics, 4Department of Bioengineering and 5Department of Medicine, Stanford University, 1501 California Avenue, Palo Alto, CA 94304","institution_ids":["https://openalex.org/I97018004"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5084043782","display_name":"Russ B. Altman","orcid":"https://orcid.org/0000-0003-3859-2905"},"institutions":[{"id":"https://openalex.org/I97018004","display_name":"Stanford University","ror":"https://ror.org/00f54p054","country_code":"US","type":"education","lineage":["https://openalex.org/I97018004"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"R. B. Altman","raw_affiliation_strings":["Institute of Computational Linguistics. Binzmuhlestrasse 171, 8050 Zurich, Switzerland, 2Biomedical Informatics Program, 3Department of Genetics, 4Department of Bioengineering and 5Department of Medicine, Stanford University, 1501 California Avenue, Palo Alto, CA 94304"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Institute of Computational Linguistics. Binzmuhlestrasse 171, 8050 Zurich, Switzerland, 2Biomedical Informatics Program, 3Department of Genetics, 4Department of Bioengineering and 5Department of Medicine, Stanford University, 1501 California Avenue, Palo Alto, CA 94304","institution_ids":["https://openalex.org/I97018004"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":10,"corresponding_author_ids":["https://openalex.org/A5025307528"],"corresponding_institution_ids":["https://openalex.org/I202697423","https://openalex.org/I97018004"],"apc_list":{"value":1415,"currency":"GBP","value_usd":1735},"apc_paid":{"value":1415,"currency":"GBP","value_usd":1735},"fwci":3.6272,"has_fulltext":true,"cited_by_count":29,"citation_normalized_percentile":{"value":0.93889683,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":94,"max":100},"biblio":{"volume":"2012","issue":"0","first_page":"bas021","last_page":"bas021"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10215","display_name":"Semantic Web and Ontologies","score":0.9937000274658203,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T13083","display_name":"Advanced Text Analysis Techniques","score":0.9567999839782715,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/usability","display_name":"Usability","score":0.7647659778594971},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7563471794128418},{"id":"https://openalex.org/keywords/workflow","display_name":"Workflow","score":0.718391478061676},{"id":"https://openalex.org/keywords/ranking","display_name":"Ranking (information retrieval)","score":0.683625340461731},{"id":"https://openalex.org/keywords/data-curation","display_name":"Data curation","score":0.6038503646850586},{"id":"https://openalex.org/keywords/information-retrieval","display_name":"Information retrieval","score":0.5980586409568787},{"id":"https://openalex.org/keywords/domain","display_name":"Domain (mathematical analysis)","score":0.5339224338531494},{"id":"https://openalex.org/keywords/interface","display_name":"Interface (matter)","score":0.4604966640472412},{"id":"https://openalex.org/keywords/world-wide-web","display_name":"World Wide Web","score":0.4536825716495514},{"id":"https://openalex.org/keywords/data-science","display_name":"Data science","score":0.3243185877799988},{"id":"https://openalex.org/keywords/human\u2013computer-interaction","display_name":"Human\u2013computer interaction","score":0.2381722331047058},{"id":"https://openalex.org/keywords/database","display_name":"Database","score":0.20495349168777466}],"concepts":[{"id":"https://openalex.org/C170130773","wikidata":"https://www.wikidata.org/wiki/Q216378","display_name":"Usability","level":2,"score":0.7647659778594971},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7563471794128418},{"id":"https://openalex.org/C177212765","wikidata":"https://www.wikidata.org/wiki/Q627335","display_name":"Workflow","level":2,"score":0.718391478061676},{"id":"https://openalex.org/C189430467","wikidata":"https://www.wikidata.org/wiki/Q7293293","display_name":"Ranking (information retrieval)","level":2,"score":0.683625340461731},{"id":"https://openalex.org/C91632574","wikidata":"https://www.wikidata.org/wiki/Q15088675","display_name":"Data curation","level":2,"score":0.6038503646850586},{"id":"https://openalex.org/C23123220","wikidata":"https://www.wikidata.org/wiki/Q816826","display_name":"Information retrieval","level":1,"score":0.5980586409568787},{"id":"https://openalex.org/C36503486","wikidata":"https://www.wikidata.org/wiki/Q11235244","display_name":"Domain (mathematical analysis)","level":2,"score":0.5339224338531494},{"id":"https://openalex.org/C113843644","wikidata":"https://www.wikidata.org/wiki/Q901882","display_name":"Interface (matter)","level":4,"score":0.4604966640472412},{"id":"https://openalex.org/C136764020","wikidata":"https://www.wikidata.org/wiki/Q466","display_name":"World Wide Web","level":1,"score":0.4536825716495514},{"id":"https://openalex.org/C2522767166","wikidata":"https://www.wikidata.org/wiki/Q2374463","display_name":"Data science","level":1,"score":0.3243185877799988},{"id":"https://openalex.org/C107457646","wikidata":"https://www.wikidata.org/wiki/Q207434","display_name":"Human\u2013computer interaction","level":1,"score":0.2381722331047058},{"id":"https://openalex.org/C77088390","wikidata":"https://www.wikidata.org/wiki/Q8513","display_name":"Database","level":1,"score":0.20495349168777466},{"id":"https://openalex.org/C157915830","wikidata":"https://www.wikidata.org/wiki/Q2928001","display_name":"Bubble","level":2,"score":0.0},{"id":"https://openalex.org/C173608175","wikidata":"https://www.wikidata.org/wiki/Q232661","display_name":"Parallel computing","level":1,"score":0.0},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.0},{"id":"https://openalex.org/C129307140","wikidata":"https://www.wikidata.org/wiki/Q6795880","display_name":"Maximum bubble pressure method","level":3,"score":0.0},{"id":"https://openalex.org/C134306372","wikidata":"https://www.wikidata.org/wiki/Q7754","display_name":"Mathematical analysis","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D000043","descriptor_name":"Abstracting and Indexing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000043","descriptor_name":"Abstracting and Indexing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000043","descriptor_name":"Abstracting and Indexing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003628","descriptor_name":"Database Management Systems","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D003628","descriptor_name":"Database Management Systems","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D003628","descriptor_name":"Database Management Systems","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D010597","descriptor_name":"Pharmacogenetics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D010597","descriptor_name":"Pharmacogenetics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D010597","descriptor_name":"Pharmacogenetics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015203","descriptor_name":"Reproducibility of Results","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015203","descriptor_name":"Reproducibility of Results","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015203","descriptor_name":"Reproducibility of Results","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016208","descriptor_name":"Databases, Factual","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016208","descriptor_name":"Databases, Factual","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016208","descriptor_name":"Databases, Factual","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D035843","descriptor_name":"Biomedical Research","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D035843","descriptor_name":"Biomedical Research","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D035843","descriptor_name":"Biomedical Research","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D057225","descriptor_name":"Data Mining","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D057225","descriptor_name":"Data Mining","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D057225","descriptor_name":"Data Mining","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false}],"locations_count":5,"locations":[{"id":"doi:10.1093/database/bas021","is_oa":true,"landing_page_url":"https://doi.org/10.1093/database/bas021","pdf_url":"https://academic.oup.com/database/article-pdf/doi/10.1093/database/bas021/1196130/bas021.pdf","source":{"id":"https://openalex.org/S4210201630","display_name":"Database","issn_l":"1758-0463","issn":["1758-0463"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311647","host_organization_name":"University of Oxford","host_organization_lineage":["https://openalex.org/P4310311647"],"host_organization_lineage_names":["University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Database","raw_type":"journal-article"},{"id":"pmid:22529178","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/22529178","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Database : the journal of biological databases and curation","raw_type":null},{"id":"pmh:oai:www.zora.uzh.ch:62071","is_oa":true,"landing_page_url":null,"pdf_url":"https://www.zora.uzh.ch/id/eprint/62071/1/Database-2012-Rinaldi-database_bas021.pdf","source":{"id":"https://openalex.org/S4306401281","display_name":"Zurich Open Repository and Archive (University of Zurich)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I202697423","host_organization_name":"University of Zurich","host_organization_lineage":["https://openalex.org/I202697423"],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Rinaldi, Fabio; Clematide, Simon; Garten, Yael; Whirl-Carrillo, Michelle; Gong, Li; Hebert, Joan M; Sangkuhl, Katrin; Thorn, Caroline F; Klein, Teri E; Altman, Russ B  (2012). Using ODIN for a PharmGKB re-validation experiment.  Database: The Journal Of Biological Databases And Curation, 2012:bas021.","raw_type":"info:eu-repo/semantics/publishedVersion"},{"id":"pmh:oai:europepmc.org:2337629","is_oa":false,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/3332569","pdf_url":null,"source":{"id":"https://openalex.org/S4306400806","display_name":"Europe PMC (PubMed Central)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1303153112","host_organization_name":"European Bioinformatics Institute","host_organization_lineage":["https://openalex.org/I1303153112"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Text"},{"id":"doi:10.5167/uzh-62071","is_oa":true,"landing_page_url":"https://doi.org/10.5167/uzh-62071","pdf_url":null,"source":{"id":"https://openalex.org/S7407051291","display_name":"Universit\u00e4t Z\u00fcrich, ZORA","issn_l":null,"issn":[],"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":null,"is_accepted":false,"is_published":null,"raw_source_name":null,"raw_type":"article-journal"}],"best_oa_location":{"id":"doi:10.1093/database/bas021","is_oa":true,"landing_page_url":"https://doi.org/10.1093/database/bas021","pdf_url":"https://academic.oup.com/database/article-pdf/doi/10.1093/database/bas021/1196130/bas021.pdf","source":{"id":"https://openalex.org/S4210201630","display_name":"Database","issn_l":"1758-0463","issn":["1758-0463"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311647","host_organization_name":"University of Oxford","host_organization_lineage":["https://openalex.org/P4310311647"],"host_organization_lineage_names":["University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Database","raw_type":"journal-article"},"sustainable_development_goals":[{"score":0.6299999952316284,"id":"https://metadata.un.org/sdg/4","display_name":"Quality Education"}],"awards":[{"id":"https://openalex.org/G2485600896","display_name":"Detection of biological interactions from biomedical literature","funder_award_id":"118396","funder_id":"https://openalex.org/F4320320924","funder_display_name":"Schweizerischer Nationalfonds zur F\u00f6rderung der Wissenschaftlichen Forschung"},{"id":"https://openalex.org/G2820672975","display_name":null,"funder_award_id":"GM61374","funder_id":"https://openalex.org/F4320337354","funder_display_name":"National Institute of General Medical Sciences"},{"id":"https://openalex.org/G4161420400","display_name":null,"funder_award_id":"100014","funder_id":"https://openalex.org/F4320320924","funder_display_name":"Schweizerischer Nationalfonds zur F\u00f6rderung der Wissenschaftlichen Forschung"},{"id":"https://openalex.org/G6143276548","display_name":null,"funder_award_id":"R24 GM61374","funder_id":"https://openalex.org/F4320337354","funder_display_name":"National Institute of General Medical Sciences"}],"funders":[{"id":"https://openalex.org/F4320306076","display_name":"National Science Foundation","ror":"https://ror.org/021nxhr62"},{"id":"https://openalex.org/F4320320924","display_name":"Schweizerischer Nationalfonds zur F\u00f6rderung der Wissenschaftlichen Forschung","ror":"https://ror.org/00yjd3n13"},{"id":"https://openalex.org/F4320332736","display_name":"Novartis Pharma","ror":"https://ror.org/0013shd50"},{"id":"https://openalex.org/F4320337354","display_name":"National Institute of General Medical Sciences","ror":"https://ror.org/04q48ey07"},{"id":"https://openalex.org/F4320337372","display_name":"U.S. National Library of Medicine","ror":"https://ror.org/0060t0j89"}],"has_content":{"grobid_xml":false,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2147641929.pdf"},"referenced_works_count":29,"referenced_works":["https://openalex.org/W1623698862","https://openalex.org/W2009433284","https://openalex.org/W2009554640","https://openalex.org/W2033031463","https://openalex.org/W2033853342","https://openalex.org/W2044514479","https://openalex.org/W2053673723","https://openalex.org/W2057419867","https://openalex.org/W2064030835","https://openalex.org/W2069024774","https://openalex.org/W2074640468","https://openalex.org/W2077612078","https://openalex.org/W2090982348","https://openalex.org/W2094344445","https://openalex.org/W2096601934","https://openalex.org/W2098738258","https://openalex.org/W2100751507","https://openalex.org/W2117349377","https://openalex.org/W2117770626","https://openalex.org/W2129227538","https://openalex.org/W2131804401","https://openalex.org/W2133993935","https://openalex.org/W2135455794","https://openalex.org/W2143997177","https://openalex.org/W2145258036","https://openalex.org/W2145383760","https://openalex.org/W2148130205","https://openalex.org/W2169250641","https://openalex.org/W2548790574"],"related_works":["https://openalex.org/W4389670110","https://openalex.org/W2187546663","https://openalex.org/W2429057255","https://openalex.org/W148745890","https://openalex.org/W2611942503","https://openalex.org/W2899790217","https://openalex.org/W1576092969","https://openalex.org/W4315621326","https://openalex.org/W2598865957","https://openalex.org/W2524154428"],"abstract_inverted_index":{"The":[0],"need":[1],"for":[2],"efficient":[3],"text-mining":[4,28,79],"tools":[5],"that":[6],"support":[7],"curation":[8,44],"of":[9,31,46,58,70,73,84],"the":[10,43,56,59,68,71,78,82,85],"biomedical":[11],"literature":[12],"is":[13],"ever":[14],"increasing.":[15],"In":[16],"this":[17],"article,":[18],"we":[19],"describe":[20],"an":[21],"experiment":[22],"aimed":[23],"at":[24],"verifying":[25],"whether":[26],"a":[27,47],"tool":[29],"capable":[30],"extracting":[32],"meaningful":[33],"relationships":[34],"among":[35],"domain":[36],"entities":[37],"can":[38],"be":[39],"successfully":[40],"integrated":[41],"into":[42],"workflow":[45],"major":[48],"biological":[49],"database.":[50],"We":[51],"evaluate":[52],"in":[53],"particular":[54],"(i)":[55],"usability":[57],"system's":[60],"interface,":[61],"as":[62,75],"perceived":[63],"by":[64,77],"users,":[65],"and":[66],"(ii)":[67],"correlation":[69],"ranking":[72],"interactions,":[74],"provided":[76],"system,":[80],"with":[81],"choices":[83],"curators.":[86]},"counts_by_year":[{"year":2017,"cited_by_count":2},{"year":2015,"cited_by_count":2},{"year":2014,"cited_by_count":4},{"year":2013,"cited_by_count":14},{"year":2012,"cited_by_count":7}],"updated_date":"2026-05-22T06:13:13.366637","created_date":"2025-10-10T00:00:00"}
