{"id":"https://openalex.org/W2121297243","doi":"https://doi.org/10.1093/database/bar048","title":"The Histone Database: an integrated resource for histones and histone fold-containing proteins","display_name":"The Histone Database: an integrated resource for histones and histone fold-containing proteins","publication_year":2011,"publication_date":"2011-10-23","ids":{"openalex":"https://openalex.org/W2121297243","doi":"https://doi.org/10.1093/database/bar048","mag":"2121297243","pmid":"https://pubmed.ncbi.nlm.nih.gov/22025671"},"language":"en","primary_location":{"id":"doi:10.1093/database/bar048","is_oa":true,"landing_page_url":"https://doi.org/10.1093/database/bar048","pdf_url":"https://academic.oup.com/database/article-pdf/doi/10.1093/database/bar048/1270486/bar048.pdf","source":{"id":"https://openalex.org/S4210201630","display_name":"Database","issn_l":"1758-0463","issn":["1758-0463"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311647","host_organization_name":"University of Oxford","host_organization_lineage":["https://openalex.org/P4310311647"],"host_organization_lineage_names":["University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Database","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://academic.oup.com/database/article-pdf/doi/10.1093/database/bar048/1270486/bar048.pdf","any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":null,"display_name":"L. Marino-Ramirez","orcid":null},"institutions":[{"id":"https://openalex.org/I4210109390","display_name":"National Center for Biotechnology Information","ror":"https://ror.org/02meqm098","country_code":"US","type":"facility","lineage":["https://openalex.org/I1299022934","https://openalex.org/I1299303238","https://openalex.org/I2800548410","https://openalex.org/I4210109390"]},{"id":"https://openalex.org/I57206974","display_name":"New York University","ror":"https://ror.org/0190ak572","country_code":"US","type":"education","lineage":["https://openalex.org/I57206974"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"L. Marino-Ramirez","raw_affiliation_strings":["Computational Biology Branch, National Center for Biotechnology Information, National Library of Medicine, National Institutes of Health, 8600 Rockville Pike, MSC 6075, Bethesda, MD 20894-6075, USA. marino@ncbi.nlm.nih.gov","New York University, New York, United States"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Computational Biology Branch, National Center for Biotechnology Information, National Library of Medicine, National Institutes of Health, 8600 Rockville Pike, MSC 6075, Bethesda, MD 20894-6075, USA. marino@ncbi.nlm.nih.gov","institution_ids":["https://openalex.org/I4210109390"]},{"raw_affiliation_string":"New York University, New York, United States","institution_ids":["https://openalex.org/I57206974"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5020083608","display_name":"Kevin M. Levine","orcid":"https://orcid.org/0000-0001-6859-3461"},"institutions":[{"id":"https://openalex.org/I4210090236","display_name":"National Human Genome Research Institute","ror":"https://ror.org/00baak391","country_code":"US","type":"facility","lineage":["https://openalex.org/I1299022934","https://openalex.org/I1299303238","https://openalex.org/I4210090236"]},{"id":"https://openalex.org/I57206974","display_name":"New York University","ror":"https://ror.org/0190ak572","country_code":"US","type":"education","lineage":["https://openalex.org/I57206974"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"K. M. Levine","raw_affiliation_strings":["Computational Biology Branch, National Center for Biotechnology Information, National Library of Medicine, National Institutes of Health, 8600 Rockville Pike, MSC 6075, Bethesda, MD 20894-6075, USA, 2 Polytechnic Institute of New York University, Six MetroTech Center, Brooklyn, NY 11201, USA and 3 Genome Technology Branch, National Human Genome Research Institute, National Institutes of Health, Building 50, Room 5222, Bethesda, MD 20892-8002","New York University, New York, United States"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Computational Biology Branch, National Center for Biotechnology Information, National Library of Medicine, National Institutes of Health, 8600 Rockville Pike, MSC 6075, Bethesda, MD 20894-6075, USA, 2 Polytechnic Institute of New York University, Six MetroTech Center, Brooklyn, NY 11201, USA and 3 Genome Technology Branch, National Human Genome Research Institute, National Institutes of Health, Building 50, Room 5222, Bethesda, MD 20892-8002","institution_ids":["https://openalex.org/I4210090236"]},{"raw_affiliation_string":"New York University, New York, United States","institution_ids":["https://openalex.org/I57206974"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5003125003","display_name":"Manuel R. Gonz\u00e1lez Morales","orcid":"https://orcid.org/0000-0001-7277-7837"},"institutions":[{"id":"https://openalex.org/I4210090236","display_name":"National Human Genome Research Institute","ror":"https://ror.org/00baak391","country_code":"US","type":"facility","lineage":["https://openalex.org/I1299022934","https://openalex.org/I1299303238","https://openalex.org/I4210090236"]},{"id":"https://openalex.org/I57206974","display_name":"New York University","ror":"https://ror.org/0190ak572","country_code":"US","type":"education","lineage":["https://openalex.org/I57206974"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"M. Morales","raw_affiliation_strings":["Computational Biology Branch, National Center for Biotechnology Information, National Library of Medicine, National Institutes of Health, 8600 Rockville Pike, MSC 6075, Bethesda, MD 20894-6075, USA, 2 Polytechnic Institute of New York University, Six MetroTech Center, Brooklyn, NY 11201, USA and 3 Genome Technology Branch, National Human Genome Research Institute, National Institutes of Health, Building 50, Room 5222, Bethesda, MD 20892-8002","New York University, New York, United States"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Computational Biology Branch, National Center for Biotechnology Information, National Library of Medicine, National Institutes of Health, 8600 Rockville Pike, MSC 6075, Bethesda, MD 20894-6075, USA, 2 Polytechnic Institute of New York University, Six MetroTech Center, Brooklyn, NY 11201, USA and 3 Genome Technology Branch, National Human Genome Research Institute, National Institutes of Health, Building 50, Room 5222, Bethesda, MD 20892-8002","institution_ids":["https://openalex.org/I4210090236"]},{"raw_affiliation_string":"New York University, New York, United States","institution_ids":["https://openalex.org/I57206974"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100452868","display_name":"Shu Zhang","orcid":"https://orcid.org/0000-0003-2543-5943"},"institutions":[{"id":"https://openalex.org/I4210090236","display_name":"National Human Genome Research Institute","ror":"https://ror.org/00baak391","country_code":"US","type":"facility","lineage":["https://openalex.org/I1299022934","https://openalex.org/I1299303238","https://openalex.org/I4210090236"]},{"id":"https://openalex.org/I57206974","display_name":"New York University","ror":"https://ror.org/0190ak572","country_code":"US","type":"education","lineage":["https://openalex.org/I57206974"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"S. Zhang","raw_affiliation_strings":["Computational Biology Branch, National Center for Biotechnology Information, National Library of Medicine, National Institutes of Health, 8600 Rockville Pike, MSC 6075, Bethesda, MD 20894-6075, USA, 2 Polytechnic Institute of New York University, Six MetroTech Center, Brooklyn, NY 11201, USA and 3 Genome Technology Branch, National Human Genome Research Institute, National Institutes of Health, Building 50, Room 5222, Bethesda, MD 20892-8002","New York University, New York, United States"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Computational Biology Branch, National Center for Biotechnology Information, National Library of Medicine, National Institutes of Health, 8600 Rockville Pike, MSC 6075, Bethesda, MD 20894-6075, USA, 2 Polytechnic Institute of New York University, Six MetroTech Center, Brooklyn, NY 11201, USA and 3 Genome Technology Branch, National Human Genome Research Institute, National Institutes of Health, Building 50, Room 5222, Bethesda, MD 20892-8002","institution_ids":["https://openalex.org/I4210090236"]},{"raw_affiliation_string":"New York University, New York, United States","institution_ids":["https://openalex.org/I57206974"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5006800257","display_name":"R. Travis Moreland","orcid":"https://orcid.org/0009-0007-1793-7413"},"institutions":[{"id":"https://openalex.org/I4210090236","display_name":"National Human Genome Research Institute","ror":"https://ror.org/00baak391","country_code":"US","type":"facility","lineage":["https://openalex.org/I1299022934","https://openalex.org/I1299303238","https://openalex.org/I4210090236"]},{"id":"https://openalex.org/I57206974","display_name":"New York University","ror":"https://ror.org/0190ak572","country_code":"US","type":"education","lineage":["https://openalex.org/I57206974"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"R. T. Moreland","raw_affiliation_strings":["Computational Biology Branch, National Center for Biotechnology Information, National Library of Medicine, National Institutes of Health, 8600 Rockville Pike, MSC 6075, Bethesda, MD 20894-6075, USA, 2 Polytechnic Institute of New York University, Six MetroTech Center, Brooklyn, NY 11201, USA and 3 Genome Technology Branch, National Human Genome Research Institute, National Institutes of Health, Building 50, Room 5222, Bethesda, MD 20892-8002","New York University, New York, United States"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Computational Biology Branch, National Center for Biotechnology Information, National Library of Medicine, National Institutes of Health, 8600 Rockville Pike, MSC 6075, Bethesda, MD 20894-6075, USA, 2 Polytechnic Institute of New York University, Six MetroTech Center, Brooklyn, NY 11201, USA and 3 Genome Technology Branch, National Human Genome Research Institute, National Institutes of Health, Building 50, Room 5222, Bethesda, MD 20892-8002","institution_ids":["https://openalex.org/I4210090236"]},{"raw_affiliation_string":"New York University, New York, United States","institution_ids":["https://openalex.org/I57206974"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5045956404","display_name":"A. D. Baxevanis","orcid":null},"institutions":[{"id":"https://openalex.org/I4210090236","display_name":"National Human Genome Research Institute","ror":"https://ror.org/00baak391","country_code":"US","type":"facility","lineage":["https://openalex.org/I1299022934","https://openalex.org/I1299303238","https://openalex.org/I4210090236"]},{"id":"https://openalex.org/I57206974","display_name":"New York University","ror":"https://ror.org/0190ak572","country_code":"US","type":"education","lineage":["https://openalex.org/I57206974"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"A. D. Baxevanis","raw_affiliation_strings":["Computational Biology Branch, National Center for Biotechnology Information, National Library of Medicine, National Institutes of Health, 8600 Rockville Pike, MSC 6075, Bethesda, MD 20894-6075, USA, 2 Polytechnic Institute of New York University, Six MetroTech Center, Brooklyn, NY 11201, USA and 3 Genome Technology Branch, National Human Genome Research Institute, National Institutes of Health, Building 50, Room 5222, Bethesda, MD 20892-8002","New York University, New York, United States"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Computational Biology Branch, National Center for Biotechnology Information, National Library of Medicine, National Institutes of Health, 8600 Rockville Pike, MSC 6075, Bethesda, MD 20894-6075, USA, 2 Polytechnic Institute of New York University, Six MetroTech Center, Brooklyn, NY 11201, USA and 3 Genome Technology Branch, National Human Genome Research Institute, National Institutes of Health, Building 50, Room 5222, Bethesda, MD 20892-8002","institution_ids":["https://openalex.org/I4210090236"]},{"raw_affiliation_string":"New York University, New York, United States","institution_ids":["https://openalex.org/I57206974"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5009953849","display_name":"David Landsman","orcid":"https://orcid.org/0000-0002-9819-6675"},"institutions":[{"id":"https://openalex.org/I4210090236","display_name":"National Human Genome Research Institute","ror":"https://ror.org/00baak391","country_code":"US","type":"facility","lineage":["https://openalex.org/I1299022934","https://openalex.org/I1299303238","https://openalex.org/I4210090236"]},{"id":"https://openalex.org/I57206974","display_name":"New York University","ror":"https://ror.org/0190ak572","country_code":"US","type":"education","lineage":["https://openalex.org/I57206974"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"D. Landsman","raw_affiliation_strings":["Computational Biology Branch, National Center for Biotechnology Information, National Library of Medicine, National Institutes of Health, 8600 Rockville Pike, MSC 6075, Bethesda, MD 20894-6075, USA, 2 Polytechnic Institute of New York University, Six MetroTech Center, Brooklyn, NY 11201, USA and 3 Genome Technology Branch, National Human Genome Research Institute, National Institutes of Health, Building 50, Room 5222, Bethesda, MD 20892-8002","New York University, New York, United States"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Computational Biology Branch, National Center for Biotechnology Information, National Library of Medicine, National Institutes of Health, 8600 Rockville Pike, MSC 6075, Bethesda, MD 20894-6075, USA, 2 Polytechnic Institute of New York University, Six MetroTech Center, Brooklyn, NY 11201, USA and 3 Genome Technology Branch, National Human Genome Research Institute, National Institutes of Health, Building 50, Room 5222, Bethesda, MD 20892-8002","institution_ids":["https://openalex.org/I4210090236"]},{"raw_affiliation_string":"New York University, New York, United States","institution_ids":["https://openalex.org/I57206974"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":3,"corresponding_author_ids":[],"corresponding_institution_ids":["https://openalex.org/I4210109390","https://openalex.org/I57206974"],"apc_list":{"value":2729,"currency":"USD","value_usd":2729},"apc_paid":{"value":2729,"currency":"USD","value_usd":2729},"fwci":1.551,"has_fulltext":true,"cited_by_count":49,"citation_normalized_percentile":{"value":0.8242555,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":99},"biblio":{"volume":"2011","issue":"0","first_page":"bar048","last_page":"bar048"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10222","display_name":"Genomics and Chromatin Dynamics","score":1.0,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10222","display_name":"Genomics and Chromatin Dynamics","score":1.0,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10521","display_name":"RNA and protein synthesis mechanisms","score":0.9986000061035156,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9972000122070312,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/histone-code","display_name":"Histone code","score":0.7335381507873535},{"id":"https://openalex.org/keywords/histone","display_name":"Histone","score":0.6791070103645325},{"id":"https://openalex.org/keywords/nucleosome","display_name":"Nucleosome","score":0.6657219529151917},{"id":"https://openalex.org/keywords/histone-methylation","display_name":"Histone methylation","score":0.6422370672225952},{"id":"https://openalex.org/keywords/histone-h1","display_name":"Histone H1","score":0.5282006859779358},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.4952944815158844},{"id":"https://openalex.org/keywords/histone-octamer","display_name":"Histone octamer","score":0.4876750707626343},{"id":"https://openalex.org/keywords/histone-h2a","display_name":"Histone H2A","score":0.48447704315185547},{"id":"https://openalex.org/keywords/chromatin","display_name":"Chromatin","score":0.4475895166397095},{"id":"https://openalex.org/keywords/histone-methyltransferase","display_name":"Histone methyltransferase","score":0.44096171855926514},{"id":"https://openalex.org/keywords/histone-modifying-enzymes","display_name":"Histone-modifying enzymes","score":0.43718162178993225},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.39223065972328186},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.3605976700782776},{"id":"https://openalex.org/keywords/dna","display_name":"DNA","score":0.21474945545196533},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.11921912431716919},{"id":"https://openalex.org/keywords/dna-methylation","display_name":"DNA methylation","score":0.09560176730155945},{"id":"https://openalex.org/keywords/gene-expression","display_name":"Gene expression","score":0.08740469813346863}],"concepts":[{"id":"https://openalex.org/C10058791","wikidata":"https://www.wikidata.org/wiki/Q910897","display_name":"Histone code","level":5,"score":0.7335381507873535},{"id":"https://openalex.org/C64927066","wikidata":"https://www.wikidata.org/wiki/Q36293","display_name":"Histone","level":3,"score":0.6791070103645325},{"id":"https://openalex.org/C84772758","wikidata":"https://www.wikidata.org/wiki/Q271794","display_name":"Nucleosome","level":4,"score":0.6657219529151917},{"id":"https://openalex.org/C22709980","wikidata":"https://www.wikidata.org/wiki/Q4117777","display_name":"Histone methylation","level":5,"score":0.6422370672225952},{"id":"https://openalex.org/C101152365","wikidata":"https://www.wikidata.org/wiki/Q838135","display_name":"Histone H1","level":4,"score":0.5282006859779358},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.4952944815158844},{"id":"https://openalex.org/C173681060","wikidata":"https://www.wikidata.org/wiki/Q5773169","display_name":"Histone octamer","level":5,"score":0.4876750707626343},{"id":"https://openalex.org/C56428682","wikidata":"https://www.wikidata.org/wiki/Q24785535","display_name":"Histone H2A","level":4,"score":0.48447704315185547},{"id":"https://openalex.org/C83640560","wikidata":"https://www.wikidata.org/wiki/Q180951","display_name":"Chromatin","level":3,"score":0.4475895166397095},{"id":"https://openalex.org/C150425827","wikidata":"https://www.wikidata.org/wiki/Q2560317","display_name":"Histone methyltransferase","level":4,"score":0.44096171855926514},{"id":"https://openalex.org/C56952853","wikidata":"https://www.wikidata.org/wiki/Q5773144","display_name":"Histone-modifying enzymes","level":5,"score":0.43718162178993225},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.39223065972328186},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.3605976700782776},{"id":"https://openalex.org/C552990157","wikidata":"https://www.wikidata.org/wiki/Q7430","display_name":"DNA","level":2,"score":0.21474945545196533},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.11921912431716919},{"id":"https://openalex.org/C190727270","wikidata":"https://www.wikidata.org/wiki/Q874745","display_name":"DNA methylation","level":4,"score":0.09560176730155945},{"id":"https://openalex.org/C150194340","wikidata":"https://www.wikidata.org/wiki/Q26972","display_name":"Gene expression","level":3,"score":0.08740469813346863}],"mesh":[{"descriptor_ui":"D000595","descriptor_name":"Amino Acid Sequence","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000595","descriptor_name":"Amino Acid Sequence","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000595","descriptor_name":"Amino Acid Sequence","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000595","descriptor_name":"Amino Acid Sequence","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001105","descriptor_name":"Archaea","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D001105","descriptor_name":"Archaea","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D001105","descriptor_name":"Archaea","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D001105","descriptor_name":"Archaea","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D006657","descriptor_name":"Histones","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D006657","descriptor_name":"Histones","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D006657","descriptor_name":"Histones","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D006657","descriptor_name":"Histones","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D006657","descriptor_name":"Histones","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D006657","descriptor_name":"Histones","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D006657","descriptor_name":"Histones","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D006657","descriptor_name":"Histones","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D011487","descriptor_name":"Protein Conformation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D011487","descriptor_name":"Protein Conformation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D011487","descriptor_name":"Protein Conformation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D011487","descriptor_name":"Protein Conformation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D017510","descriptor_name":"Protein Folding","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D017510","descriptor_name":"Protein Folding","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D017510","descriptor_name":"Protein Folding","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D017510","descriptor_name":"Protein Folding","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true}],"locations_count":3,"locations":[{"id":"doi:10.1093/database/bar048","is_oa":true,"landing_page_url":"https://doi.org/10.1093/database/bar048","pdf_url":"https://academic.oup.com/database/article-pdf/doi/10.1093/database/bar048/1270486/bar048.pdf","source":{"id":"https://openalex.org/S4210201630","display_name":"Database","issn_l":"1758-0463","issn":["1758-0463"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311647","host_organization_name":"University of Oxford","host_organization_lineage":["https://openalex.org/P4310311647"],"host_organization_lineage_names":["University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Database","raw_type":"journal-article"},{"id":"pmid:22025671","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/22025671","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Database : the journal of biological databases and curation","raw_type":"Journal Article"},{"id":"pmh:oai:europepmc.org:2201387","is_oa":false,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/3199919","pdf_url":null,"source":{"id":"https://openalex.org/S4306400806","display_name":"Europe PMC (PubMed Central)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1303153112","host_organization_name":"European Bioinformatics Institute","host_organization_lineage":["https://openalex.org/I1303153112"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1093/database/bar048","is_oa":true,"landing_page_url":"https://doi.org/10.1093/database/bar048","pdf_url":"https://academic.oup.com/database/article-pdf/doi/10.1093/database/bar048/1270486/bar048.pdf","source":{"id":"https://openalex.org/S4210201630","display_name":"Database","issn_l":"1758-0463","issn":["1758-0463"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311647","host_organization_name":"University of Oxford","host_organization_lineage":["https://openalex.org/P4310311647"],"host_organization_lineage_names":["University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Database","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G202981822","display_name":null,"funder_award_id":"Z99 LM999999","funder_id":"https://openalex.org/F4320332161","funder_display_name":"National Institutes of Health"}],"funders":[{"id":"https://openalex.org/F4320332161","display_name":"National Institutes of Health","ror":"https://ror.org/01cwqze88"},{"id":"https://openalex.org/F4320337372","display_name":"U.S. National Library of Medicine","ror":"https://ror.org/0060t0j89"}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2121297243.pdf","grobid_xml":"https://content.openalex.org/works/W2121297243.grobid-xml"},"referenced_works_count":49,"referenced_works":["https://openalex.org/W255996521","https://openalex.org/W1965910641","https://openalex.org/W1966350453","https://openalex.org/W1968637358","https://openalex.org/W1979156726","https://openalex.org/W1988965948","https://openalex.org/W1998051622","https://openalex.org/W2007835245","https://openalex.org/W2010048885","https://openalex.org/W2018012535","https://openalex.org/W2026344452","https://openalex.org/W2033913382","https://openalex.org/W2038754280","https://openalex.org/W2041281151","https://openalex.org/W2042249135","https://openalex.org/W2050330741","https://openalex.org/W2060557678","https://openalex.org/W2063399689","https://openalex.org/W2063433107","https://openalex.org/W2067427233","https://openalex.org/W2070040073","https://openalex.org/W2070347289","https://openalex.org/W2080577763","https://openalex.org/W2087573417","https://openalex.org/W2090954579","https://openalex.org/W2092375474","https://openalex.org/W2096083625","https://openalex.org/W2097633421","https://openalex.org/W2098421068","https://openalex.org/W2103638977","https://openalex.org/W2113536669","https://openalex.org/W2122137001","https://openalex.org/W2129470527","https://openalex.org/W2130284512","https://openalex.org/W2130479394","https://openalex.org/W2131924932","https://openalex.org/W2132926880","https://openalex.org/W2137597742","https://openalex.org/W2142460132","https://openalex.org/W2144792857","https://openalex.org/W2151553287","https://openalex.org/W2156201868","https://openalex.org/W2156207120","https://openalex.org/W2158714788","https://openalex.org/W2161062388","https://openalex.org/W2314152780","https://openalex.org/W2325642794","https://openalex.org/W4211083314","https://openalex.org/W4230606671"],"related_works":["https://openalex.org/W2012258317","https://openalex.org/W1586131224","https://openalex.org/W2049555524","https://openalex.org/W633578850","https://openalex.org/W4200424522","https://openalex.org/W107012357","https://openalex.org/W2292393729","https://openalex.org/W134483022","https://openalex.org/W145658961","https://openalex.org/W2122835448"],"abstract_inverted_index":{"Eukaryotic":[0],"chromatin":[1,178],"is":[2,69,170],"composed":[3],"of":[4,22,47,73,77,99,137,177],"DNA":[5,15],"and":[6,45,63,75,79,101,106,145,151,180,185],"protein":[7],"components-core":[8],"histones-that":[9],"act":[10],"to":[11,28,56],"compactly":[12],"pack":[13],"the":[14,18,97,112,115,138,147,152,175],"into":[16],"nucleosomes,":[17],"fundamental":[19],"building":[20],"blocks":[21],"chromatin.":[23],"These":[24],"nucleosomes":[25,30],"are":[26,35],"connected":[27],"adjacent":[29],"by":[31],"linker":[32,148],"histones.":[33,154],"Nucleosomes":[34],"highly":[36],"dynamic":[37],"and,":[38],"through":[39],"various":[40],"core":[41,140],"histone":[42,49,83,105,107,125,163,186],"post-translational":[43],"modifications":[44],"incorporation":[46],"diverse":[48],"variants,":[50],"can":[51],"serve":[52],"as":[53,60],"epigenetic":[54],"marks":[55],"control":[57],"processes":[58],"such":[59],"gene":[61],"expression":[62],"recombination.":[64],"The":[65,127,155,166],"Histone":[66,167],"Sequence":[67,168],"Database":[68,169],"a":[70,93],"curated":[71],"collection":[72],"sequences":[74,100],"structures":[76],"histones":[78,141,149,184],"non-histone":[80],"proteins":[81,109],"containing":[82],"folds,":[84],"assembled":[85],"from":[86],"major":[87],"public":[88],"databases.":[89],"Here,":[90],"we":[91],"report":[92],"substantial":[94],"increase":[95],"in":[96,111],"number":[98],"taxonomic":[102],"coverage":[103],"for":[104,135,174],"fold-containing":[108,164,187],"available":[110],"database.":[113],"Additionally,":[114],"database":[116,128,156],"now":[117],"contains":[118],"an":[119,171],"expanded":[120],"dataset":[121],"that":[122],"includes":[123,158],"archaeal":[124,153],"sequences.":[126],"also":[129,157],"provides":[130],"comprehensive":[131],"multiple":[132],"sequence":[133],"alignments":[134],"each":[136],"four":[139],"(H2A,":[142],"H2B,":[143],"H3":[144],"H4),":[146],"(H1/H5)":[150],"current":[159],"information":[160],"on":[161,183],"solved":[162],"structures.":[165],"inclusive":[172],"resource":[173],"analysis":[176],"structure":[179],"function":[181],"focused":[182],"proteins.":[188]},"counts_by_year":[{"year":2026,"cited_by_count":2},{"year":2024,"cited_by_count":2},{"year":2023,"cited_by_count":2},{"year":2021,"cited_by_count":4},{"year":2020,"cited_by_count":1},{"year":2019,"cited_by_count":4},{"year":2018,"cited_by_count":3},{"year":2017,"cited_by_count":2},{"year":2016,"cited_by_count":9},{"year":2015,"cited_by_count":8},{"year":2014,"cited_by_count":2},{"year":2013,"cited_by_count":4},{"year":2012,"cited_by_count":4}],"updated_date":"2026-08-25T07:29:55.448023","created_date":"2025-10-10T00:00:00"}
