{"id":"https://openalex.org/W7124287085","doi":"https://doi.org/10.1093/database/baaf090","title":"GdbMTB: a manually curated genomic database of magnetotactic bacteria","display_name":"GdbMTB: a manually curated genomic database of magnetotactic bacteria","publication_year":2025,"publication_date":"2025-12-17","ids":{"openalex":"https://openalex.org/W7124287085","doi":"https://doi.org/10.1093/database/baaf090","pmid":"https://pubmed.ncbi.nlm.nih.gov/41537192"},"language":"en","primary_location":{"id":"doi:10.1093/database/baaf090","is_oa":true,"landing_page_url":"https://doi.org/10.1093/database/baaf090","pdf_url":null,"source":{"id":"https://openalex.org/S4210201630","display_name":"Database","issn_l":"1758-0463","issn":["1758-0463"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311647","host_organization_name":"University of Oxford","host_organization_lineage":["https://openalex.org/P4310311647"],"host_organization_lineage_names":["University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Database","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://doi.org/10.1093/database/baaf090","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5004949579","display_name":"Runjia Ji","orcid":"https://orcid.org/0000-0001-7316-9251"},"institutions":[{"id":"https://openalex.org/I4210100130","display_name":"Institute of Geology and Geophysics","ror":"https://ror.org/0126v6t20","country_code":"AZ","type":"facility","lineage":["https://openalex.org/I4210100130","https://openalex.org/I4210115115"]},{"id":"https://openalex.org/I4210126061","display_name":"Institute of Geology and Geophysics","ror":"https://ror.org/030vmwa78","country_code":"CN","type":"facility","lineage":["https://openalex.org/I19820366","https://openalex.org/I4210126061"]},{"id":"https://openalex.org/I4210165038","display_name":"University of Chinese Academy of Sciences","ror":"https://ror.org/05qbk4x57","country_code":"CN","type":"education","lineage":["https://openalex.org/I19820366","https://openalex.org/I4210165038"]}],"countries":["AZ","CN"],"is_corresponding":false,"raw_author_name":"Runjia Ji","raw_affiliation_strings":["College of Earth and Planetary Sciences, University of Chinese Academy of Sciences , No. 19A, Yuquan Road, Shijingshan District, Beijing 100049 ,","Key Laboratory of Planetary Science and Frontier Technology, Institute of Geology and Geophysics, Chinese Academy of Sciences , No. 19, Beitucheng Western Road, Chaoyang District, Beijing 100029 ,"],"raw_orcid":"https://orcid.org/0000-0001-7316-9251","affiliations":[{"raw_affiliation_string":"College of Earth and Planetary Sciences, University of Chinese Academy of Sciences , No. 19A, Yuquan Road, Shijingshan District, Beijing 100049 ,","institution_ids":["https://openalex.org/I4210165038"]},{"raw_affiliation_string":"Key Laboratory of Planetary Science and Frontier Technology, Institute of Geology and Geophysics, Chinese Academy of Sciences , No. 19, Beitucheng Western Road, Chaoyang District, Beijing 100029 ,","institution_ids":["https://openalex.org/I4210100130","https://openalex.org/I4210126061"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5044373177","display_name":"Yongxin Pan","orcid":null},"institutions":[{"id":"https://openalex.org/I4210100130","display_name":"Institute of Geology and Geophysics","ror":"https://ror.org/0126v6t20","country_code":"AZ","type":"facility","lineage":["https://openalex.org/I4210100130","https://openalex.org/I4210115115"]},{"id":"https://openalex.org/I4210126061","display_name":"Institute of Geology and Geophysics","ror":"https://ror.org/030vmwa78","country_code":"CN","type":"facility","lineage":["https://openalex.org/I19820366","https://openalex.org/I4210126061"]},{"id":"https://openalex.org/I4210165038","display_name":"University of Chinese Academy of Sciences","ror":"https://ror.org/05qbk4x57","country_code":"CN","type":"education","lineage":["https://openalex.org/I19820366","https://openalex.org/I4210165038"]}],"countries":["AZ","CN"],"is_corresponding":false,"raw_author_name":"Yongxin Pan","raw_affiliation_strings":["College of Earth and Planetary Sciences, University of Chinese Academy of Sciences , No. 19A, Yuquan Road, Shijingshan District, Beijing 100049 ,","Key Laboratory of Planetary Science and Frontier Technology, Institute of Geology and Geophysics, Chinese Academy of Sciences , No. 19, Beitucheng Western Road, Chaoyang District, Beijing 100029 ,"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"College of Earth and Planetary Sciences, University of Chinese Academy of Sciences , No. 19A, Yuquan Road, Shijingshan District, Beijing 100049 ,","institution_ids":["https://openalex.org/I4210165038"]},{"raw_affiliation_string":"Key Laboratory of Planetary Science and Frontier Technology, Institute of Geology and Geophysics, Chinese Academy of Sciences , No. 19, Beitucheng Western Road, Chaoyang District, Beijing 100029 ,","institution_ids":["https://openalex.org/I4210100130","https://openalex.org/I4210126061"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5108083771","display_name":"W. Lin","orcid":null},"institutions":[{"id":"https://openalex.org/I4210100130","display_name":"Institute of Geology and Geophysics","ror":"https://ror.org/0126v6t20","country_code":"AZ","type":"facility","lineage":["https://openalex.org/I4210100130","https://openalex.org/I4210115115"]},{"id":"https://openalex.org/I4210126061","display_name":"Institute of Geology and Geophysics","ror":"https://ror.org/030vmwa78","country_code":"CN","type":"facility","lineage":["https://openalex.org/I19820366","https://openalex.org/I4210126061"]},{"id":"https://openalex.org/I4210165038","display_name":"University of Chinese Academy of Sciences","ror":"https://ror.org/05qbk4x57","country_code":"CN","type":"education","lineage":["https://openalex.org/I19820366","https://openalex.org/I4210165038"]}],"countries":["AZ","CN"],"is_corresponding":true,"raw_author_name":"Wei Lin","raw_affiliation_strings":["College of Earth and Planetary Sciences, University of Chinese Academy of Sciences , No. 19A, Yuquan Road, Shijingshan District, Beijing 100049 ,","Key Laboratory of Planetary Science and Frontier Technology, Institute of Geology and Geophysics, Chinese Academy of Sciences , No. 19, Beitucheng Western Road, Chaoyang District, Beijing 100029 ,"],"raw_orcid":"https://orcid.org/0000-0003-4075-7414","affiliations":[{"raw_affiliation_string":"College of Earth and Planetary Sciences, University of Chinese Academy of Sciences , No. 19A, Yuquan Road, Shijingshan District, Beijing 100049 ,","institution_ids":["https://openalex.org/I4210165038"]},{"raw_affiliation_string":"Key Laboratory of Planetary Science and Frontier Technology, Institute of Geology and Geophysics, Chinese Academy of Sciences , No. 19, Beitucheng Western Road, Chaoyang District, Beijing 100029 ,","institution_ids":["https://openalex.org/I4210100130","https://openalex.org/I4210126061"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":3,"corresponding_author_ids":["https://openalex.org/A5108083771"],"corresponding_institution_ids":["https://openalex.org/I4210100130","https://openalex.org/I4210126061","https://openalex.org/I4210165038"],"apc_list":{"value":1415,"currency":"GBP","value_usd":1735},"apc_paid":{"value":1415,"currency":"GBP","value_usd":1735},"fwci":0.0,"has_fulltext":true,"cited_by_count":0,"citation_normalized_percentile":{"value":0.51320009,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":null,"biblio":{"volume":"2026","issue":null,"first_page":null,"last_page":null},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11786","display_name":"Geomagnetism and Paleomagnetism Studies","score":0.9782000184059143,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11786","display_name":"Geomagnetism and Paleomagnetism Studies","score":0.9782000184059143,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12180","display_name":"Polar Research and Ecology","score":0.0017000000225380063,"subfield":{"id":"https://openalex.org/subfields/2303","display_name":"Ecology"},"field":{"id":"https://openalex.org/fields/23","display_name":"Environmental Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T12344","display_name":"Silicon Effects in Agriculture","score":0.0013000000035390258,"subfield":{"id":"https://openalex.org/subfields/1110","display_name":"Plant Science"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/magnetotactic-bacteria","display_name":"Magnetotactic bacteria","score":0.8292999863624573},{"id":"https://openalex.org/keywords/magnetosome","display_name":"Magnetosome","score":0.7882999777793884},{"id":"https://openalex.org/keywords/context","display_name":"Context (archaeology)","score":0.5986999869346619},{"id":"https://openalex.org/keywords/biomineralization","display_name":"Biomineralization","score":0.5968999862670898},{"id":"https://openalex.org/keywords/genome","display_name":"Genome","score":0.5245000123977661},{"id":"https://openalex.org/keywords/genomics","display_name":"Genomics","score":0.44780001044273376},{"id":"https://openalex.org/keywords/genomic-island","display_name":"Genomic island","score":0.39340001344680786}],"concepts":[{"id":"https://openalex.org/C2777149353","wikidata":"https://www.wikidata.org/wiki/Q836244","display_name":"Magnetotactic bacteria","level":3,"score":0.8292999863624573},{"id":"https://openalex.org/C174626541","wikidata":"https://www.wikidata.org/wiki/Q1884420","display_name":"Magnetosome","level":3,"score":0.7882999777793884},{"id":"https://openalex.org/C2779343474","wikidata":"https://www.wikidata.org/wiki/Q3109175","display_name":"Context (archaeology)","level":2,"score":0.5986999869346619},{"id":"https://openalex.org/C183586093","wikidata":"https://www.wikidata.org/wiki/Q610457","display_name":"Biomineralization","level":2,"score":0.5968999862670898},{"id":"https://openalex.org/C141231307","wikidata":"https://www.wikidata.org/wiki/Q7020","display_name":"Genome","level":3,"score":0.5245000123977661},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.4880000054836273},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.4772999882698059},{"id":"https://openalex.org/C189206191","wikidata":"https://www.wikidata.org/wiki/Q222046","display_name":"Genomics","level":4,"score":0.44780001044273376},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.41280001401901245},{"id":"https://openalex.org/C2780258820","wikidata":"https://www.wikidata.org/wiki/Q5195454","display_name":"Genomic island","level":4,"score":0.39340001344680786},{"id":"https://openalex.org/C2780049196","wikidata":"https://www.wikidata.org/wiki/Q23582628","display_name":"Provenance","level":2,"score":0.37459999322891235},{"id":"https://openalex.org/C141674004","wikidata":"https://www.wikidata.org/wiki/Q1344256","display_name":"Ensembl","level":5,"score":0.3637999892234802},{"id":"https://openalex.org/C15151743","wikidata":"https://www.wikidata.org/wiki/Q903778","display_name":"Metagenomics","level":3,"score":0.36160001158714294},{"id":"https://openalex.org/C77088390","wikidata":"https://www.wikidata.org/wiki/Q8513","display_name":"Database","level":1,"score":0.3434999883174896},{"id":"https://openalex.org/C43521106","wikidata":"https://www.wikidata.org/wiki/Q2165493","display_name":"Pipeline (software)","level":2,"score":0.3425999879837036},{"id":"https://openalex.org/C3020077223","wikidata":"https://www.wikidata.org/wiki/Q222046","display_name":"Genomic information","level":4,"score":0.31200000643730164},{"id":"https://openalex.org/C2522767166","wikidata":"https://www.wikidata.org/wiki/Q2374463","display_name":"Data science","level":1,"score":0.2985000014305115},{"id":"https://openalex.org/C72634772","wikidata":"https://www.wikidata.org/wiki/Q386824","display_name":"Data integration","level":2,"score":0.28999999165534973},{"id":"https://openalex.org/C177212765","wikidata":"https://www.wikidata.org/wiki/Q627335","display_name":"Workflow","level":2,"score":0.2685999870300293},{"id":"https://openalex.org/C60644358","wikidata":"https://www.wikidata.org/wiki/Q128570","display_name":"Bioinformatics","level":1,"score":0.26750001311302185},{"id":"https://openalex.org/C24756922","wikidata":"https://www.wikidata.org/wiki/Q1757694","display_name":"Data quality","level":3,"score":0.2565000057220459}],"mesh":[{"descriptor_ui":"D000096104","descriptor_name":"Biocuration","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000096104","descriptor_name":"Biocuration","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000096104","descriptor_name":"Biocuration","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000096104","descriptor_name":"Biocuration","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000096104","descriptor_name":"Biocuration","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001419","descriptor_name":"Bacteria","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D001419","descriptor_name":"Bacteria","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D001419","descriptor_name":"Bacteria","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D001419","descriptor_name":"Bacteria","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D001419","descriptor_name":"Bacteria","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D001419","descriptor_name":"Bacteria","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D001419","descriptor_name":"Bacteria","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D001419","descriptor_name":"Bacteria","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D001419","descriptor_name":"Bacteria","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D001419","descriptor_name":"Bacteria","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D016680","descriptor_name":"Genome, Bacterial","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016680","descriptor_name":"Genome, Bacterial","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016680","descriptor_name":"Genome, Bacterial","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016680","descriptor_name":"Genome, Bacterial","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016680","descriptor_name":"Genome, Bacterial","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016680","descriptor_name":"Genome, Bacterial","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016680","descriptor_name":"Genome, Bacterial","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016680","descriptor_name":"Genome, Bacterial","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016680","descriptor_name":"Genome, Bacterial","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016680","descriptor_name":"Genome, Bacterial","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D055944","descriptor_name":"Magnetosomes","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D055944","descriptor_name":"Magnetosomes","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D055944","descriptor_name":"Magnetosomes","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D055944","descriptor_name":"Magnetosomes","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D055944","descriptor_name":"Magnetosomes","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D055944","descriptor_name":"Magnetosomes","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D055944","descriptor_name":"Magnetosomes","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D055944","descriptor_name":"Magnetosomes","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D055944","descriptor_name":"Magnetosomes","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D055944","descriptor_name":"Magnetosomes","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D066289","descriptor_name":"Data Curation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D066289","descriptor_name":"Data Curation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D066289","descriptor_name":"Data Curation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D066289","descriptor_name":"Data Curation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D066289","descriptor_name":"Data Curation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D066289","descriptor_name":"Data Curation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D066289","descriptor_name":"Data Curation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D066289","descriptor_name":"Data Curation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D066289","descriptor_name":"Data Curation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D066289","descriptor_name":"Data Curation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true}],"locations_count":3,"locations":[{"id":"doi:10.1093/database/baaf090","is_oa":true,"landing_page_url":"https://doi.org/10.1093/database/baaf090","pdf_url":null,"source":{"id":"https://openalex.org/S4210201630","display_name":"Database","issn_l":"1758-0463","issn":["1758-0463"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311647","host_organization_name":"University of Oxford","host_organization_lineage":["https://openalex.org/P4310311647"],"host_organization_lineage_names":["University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Database","raw_type":"journal-article"},{"id":"pmid:41537192","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/41537192","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Database : the journal of biological databases and curation","raw_type":"Journal Article"},{"id":"pmh:oai:pubmedcentral.nih.gov:12805115","is_oa":true,"landing_page_url":"https://pmc.ncbi.nlm.nih.gov/articles/PMC12805115/","pdf_url":"https://pmc.ncbi.nlm.nih.gov/articles/PMC12805115/pdf/baaf090.pdf","source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Database (Oxford)","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1093/database/baaf090","is_oa":true,"landing_page_url":"https://doi.org/10.1093/database/baaf090","pdf_url":null,"source":{"id":"https://openalex.org/S4210201630","display_name":"Database","issn_l":"1758-0463","issn":["1758-0463"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311647","host_organization_name":"University of Oxford","host_organization_lineage":["https://openalex.org/P4310311647"],"host_organization_lineage_names":["University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Database","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G166954602","display_name":null,"funder_award_id":"42293293","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G2079022619","display_name":null,"funder_award_id":"42\u2009388\u2009101","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G5079358502","display_name":null,"funder_award_id":"YSBR-097","funder_id":"https://openalex.org/F4320321133","funder_display_name":"Chinese Academy of Sciences"},{"id":"https://openalex.org/G661989718","display_name":null,"funder_award_id":"T2225011","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"}],"funders":[{"id":"https://openalex.org/F4320321001","display_name":"National Natural Science Foundation of China","ror":"https://ror.org/01h0zpd94"},{"id":"https://openalex.org/F4320321133","display_name":"Chinese Academy of Sciences","ror":"https://ror.org/034t30j35"},{"id":"https://openalex.org/F4320336672","display_name":"Institute of Geology and Geophysics, Chinese Academy of Sciences","ror":"https://ror.org/030vmwa78"}],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":74,"referenced_works":["https://openalex.org/W1502054152","https://openalex.org/W1733305625","https://openalex.org/W1891277175","https://openalex.org/W1951870558","https://openalex.org/W1979564397","https://openalex.org/W1996053875","https://openalex.org/W2004548026","https://openalex.org/W2054010385","https://openalex.org/W2071626986","https://openalex.org/W2084374614","https://openalex.org/W2086361439","https://openalex.org/W2098711830","https://openalex.org/W2107772251","https://openalex.org/W2110438533","https://openalex.org/W2111547136","https://openalex.org/W2111647009","https://openalex.org/W2112364185","https://openalex.org/W2114850508","https://openalex.org/W2117803725","https://openalex.org/W2132366534","https://openalex.org/W2139124517","https://openalex.org/W2143308917","https://openalex.org/W2143485490","https://openalex.org/W2433671247","https://openalex.org/W2520157639","https://openalex.org/W2554188107","https://openalex.org/W2588409318","https://openalex.org/W2618335726","https://openalex.org/W2736920791","https://openalex.org/W2745006471","https://openalex.org/W2753961085","https://openalex.org/W2791814671","https://openalex.org/W2895532240","https://openalex.org/W2910738117","https://openalex.org/W2943642914","https://openalex.org/W2951254987","https://openalex.org/W2982480633","https://openalex.org/W2983817879","https://openalex.org/W2997255452","https://openalex.org/W3044992695","https://openalex.org/W3080610554","https://openalex.org/W3095006384","https://openalex.org/W3119047610","https://openalex.org/W3168040031","https://openalex.org/W3170769654","https://openalex.org/W3199639203","https://openalex.org/W3200103613","https://openalex.org/W3215751839","https://openalex.org/W4200564640","https://openalex.org/W4206112307","https://openalex.org/W4280523768","https://openalex.org/W4280579582","https://openalex.org/W4281648478","https://openalex.org/W4289130404","https://openalex.org/W4289274885","https://openalex.org/W4293241835","https://openalex.org/W4304481015","https://openalex.org/W4307301967","https://openalex.org/W4307515246","https://openalex.org/W4307777314","https://openalex.org/W4311378259","https://openalex.org/W4376875741","https://openalex.org/W4380680710","https://openalex.org/W4385302529","https://openalex.org/W4385969284","https://openalex.org/W4394785938","https://openalex.org/W4400353742","https://openalex.org/W4401844102","https://openalex.org/W4404303061","https://openalex.org/W4404763583","https://openalex.org/W4406148768","https://openalex.org/W4412857563","https://openalex.org/W4413135332","https://openalex.org/W4414380419"],"related_works":[],"abstract_inverted_index":{"Magnetotactic":[0,67],"bacteria":[1],"(MTB)":[2],"are":[3],"a":[4,95,144],"unique":[5],"group":[6],"of":[7,10,19,33,66,82,109,138,146],"microorganisms":[8],"capable":[9],"navigating":[11],"along":[12],"geomagnetic":[13],"field":[14],"lines":[15],"through":[16],"the":[17,63,70,136],"biomineralization":[18,111,173],"intracellular":[20],"magnetic":[21],"nanocrystals":[22],"called":[23],"magnetosomes.":[24],"While":[25],"genomic":[26,39,74,163],"analyses":[27],"have":[28],"substantially":[29],"advanced":[30,155],"our":[31],"understanding":[32],"these":[34,59],"predominantly":[35],"uncultured":[36],"microorganisms,":[37],"MTB":[38,88,156,162],"data":[40,115],"remain":[41],"scattered":[42],"across":[43],"multiple":[44],"databases":[45],"with":[46],"inconsistent":[47],"quality":[48,103],"profiles":[49],"and":[50,90,107,125,149,172],"incomplete":[51],"metadata,":[52,121],"limiting":[53],"comprehensive":[54],"research":[55,130,168],"efforts.":[56],"To":[57],"address":[58],"challenges,":[60],"we":[61],"developed":[62],"Genomic":[64],"Database":[65,175],"Bacteria":[68],"(GdbMTB),":[69],"first":[71],"comprehensive,":[72],"curated":[73,120],"resource":[75],"dedicated":[76],"to":[77,134,153,161],"MTB.":[78],"The":[79,119],"current":[80],"version":[81],"GdbMTB":[83,142,158],"integrates":[84],"365":[85],"publicly":[86],"available":[87],"genomes":[89],"their":[91],"associated":[92],"metadata.":[93],"Through":[94],"standardized":[96],"bioinformatics":[97,147],"workflow,":[98],"it":[99],"provides":[100],"detailed":[101],"genome":[102],"assessments,":[104],"taxonomic":[105],"classifications,":[106],"annotations":[108],"magnetosome":[110],"genes,":[112],"ensuring":[113],"reliable":[114],"for":[116],"downstream":[117],"analyses.":[118],"encompassing":[122],"environmental":[123],"context":[124],"publication":[126],"details,":[127],"offers":[128,143],"crucial":[129],"background,":[131],"enabling":[132],"users":[133],"trace":[135],"provenance":[137],"each":[139],"genome.":[140],"Additionally,":[141],"suite":[145],"tools":[148],"an":[150],"analysis":[151],"pipeline":[152],"facilitate":[154],"studies.":[157,174],"enhances":[159],"accessibility":[160],"data,":[164],"thereby":[165],"promoting":[166],"interdisciplinary":[167],"in":[169],"microbiology,":[170],"geomicrobiology,":[171],"URL:":[176],"https://www.gdbmtb.cn/.":[177]},"counts_by_year":[],"updated_date":"2026-08-01T09:00:35.917206","created_date":"2026-01-16T00:00:00"}
