{"id":"https://openalex.org/W4414628428","doi":"https://doi.org/10.1093/database/baaf066","title":"Navigating open-source waters: the pharmaceutical industry\u2019s role in bioontology development","display_name":"Navigating open-source waters: the pharmaceutical industry\u2019s role in bioontology development","publication_year":2025,"publication_date":"2025-01-01","ids":{"openalex":"https://openalex.org/W4414628428","doi":"https://doi.org/10.1093/database/baaf066","pmid":"https://pubmed.ncbi.nlm.nih.gov/41026496"},"language":"en","primary_location":{"id":"doi:10.1093/database/baaf066","is_oa":true,"landing_page_url":"https://doi.org/10.1093/database/baaf066","pdf_url":"https://academic.oup.com/database/article-pdf/doi/10.1093/database/baaf066/64443357/baaf066.pdf","source":{"id":"https://openalex.org/S4210201630","display_name":"Database","issn_l":"1758-0463","issn":["1758-0463"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311647","host_organization_name":"University of Oxford","host_organization_lineage":["https://openalex.org/P4310311647"],"host_organization_lineage_names":["University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Database","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://academic.oup.com/database/article-pdf/doi/10.1093/database/baaf066/64443357/baaf066.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5022700406","display_name":"Shawn Zheng Kai Tan","orcid":"https://orcid.org/0000-0001-7258-9596"},"institutions":[{"id":"https://openalex.org/I189090001","display_name":"Novo Nordisk (Denmark)","ror":"https://ror.org/0435rc536","country_code":"DK","type":"company","lineage":["https://openalex.org/I189090001","https://openalex.org/I2801134892","https://openalex.org/I4210159963"]},{"id":"https://openalex.org/I4210106615","display_name":"Novo Nordisk (United States)","ror":"https://ror.org/011y67d23","country_code":"US","type":"company","lineage":["https://openalex.org/I189090001","https://openalex.org/I2801134892","https://openalex.org/I4210106615","https://openalex.org/I4210159963"]}],"countries":["DK","US"],"is_corresponding":true,"raw_author_name":"Shawn Zheng Kai Tan","raw_affiliation_strings":["Novo Nordisk A/S , Novo Nordisk Park 1, 2760 M\u00e5l\u00f8v ,"],"affiliations":[{"raw_affiliation_string":"Novo Nordisk A/S , Novo Nordisk Park 1, 2760 M\u00e5l\u00f8v ,","institution_ids":["https://openalex.org/I189090001","https://openalex.org/I4210106615"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5110400510","display_name":"Joshua Valdez","orcid":null},"institutions":[{"id":"https://openalex.org/I189090001","display_name":"Novo Nordisk (Denmark)","ror":"https://ror.org/0435rc536","country_code":"DK","type":"company","lineage":["https://openalex.org/I189090001","https://openalex.org/I2801134892","https://openalex.org/I4210159963"]},{"id":"https://openalex.org/I4210106615","display_name":"Novo Nordisk (United States)","ror":"https://ror.org/011y67d23","country_code":"US","type":"company","lineage":["https://openalex.org/I189090001","https://openalex.org/I2801134892","https://openalex.org/I4210106615","https://openalex.org/I4210159963"]}],"countries":["DK","US"],"is_corresponding":false,"raw_author_name":"Joshua Daniel Valdez","raw_affiliation_strings":["Novo Nordisk A/S , Novo Nordisk Park 1, 2760 M\u00e5l\u00f8v ,"],"affiliations":[{"raw_affiliation_string":"Novo Nordisk A/S , Novo Nordisk Park 1, 2760 M\u00e5l\u00f8v ,","institution_ids":["https://openalex.org/I189090001","https://openalex.org/I4210106615"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5097424518","display_name":"Saritha Vettikunnel Kuriakose","orcid":null},"institutions":[{"id":"https://openalex.org/I189090001","display_name":"Novo Nordisk (Denmark)","ror":"https://ror.org/0435rc536","country_code":"DK","type":"company","lineage":["https://openalex.org/I189090001","https://openalex.org/I2801134892","https://openalex.org/I4210159963"]},{"id":"https://openalex.org/I4210106615","display_name":"Novo Nordisk (United States)","ror":"https://ror.org/011y67d23","country_code":"US","type":"company","lineage":["https://openalex.org/I189090001","https://openalex.org/I2801134892","https://openalex.org/I4210106615","https://openalex.org/I4210159963"]}],"countries":["DK","US"],"is_corresponding":false,"raw_author_name":"Saritha Vettikunnel Kuriakose","raw_affiliation_strings":["Novo Nordisk A/S , Novo Nordisk Park 1, 2760 M\u00e5l\u00f8v ,"],"affiliations":[{"raw_affiliation_string":"Novo Nordisk A/S , Novo Nordisk Park 1, 2760 M\u00e5l\u00f8v ,","institution_ids":["https://openalex.org/I189090001","https://openalex.org/I4210106615"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":3,"corresponding_author_ids":["https://openalex.org/A5022700406"],"corresponding_institution_ids":["https://openalex.org/I189090001","https://openalex.org/I4210106615"],"apc_list":{"value":1415,"currency":"GBP","value_usd":1735},"apc_paid":{"value":1415,"currency":"GBP","value_usd":1735},"fwci":0.0,"has_fulltext":true,"cited_by_count":0,"citation_normalized_percentile":{"value":0.24088412,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":null,"biblio":{"volume":"2025","issue":null,"first_page":null,"last_page":null},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9952999949455261,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9952999949455261,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10582","display_name":"Ethics in Clinical Research","score":0.9682000279426575,"subfield":{"id":"https://openalex.org/subfields/2739","display_name":"Public Health, Environmental and Occupational Health"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T12859","display_name":"Cell Image Analysis Techniques","score":0.9664000272750854,"subfield":{"id":"https://openalex.org/subfields/1304","display_name":"Biophysics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/government","display_name":"Government (linguistics)","score":0.5956000089645386},{"id":"https://openalex.org/keywords/core","display_name":"Core (optical fiber)","score":0.47189998626708984},{"id":"https://openalex.org/keywords/data-sharing","display_name":"Data sharing","score":0.35100001096725464},{"id":"https://openalex.org/keywords/information-sharing","display_name":"Information sharing","score":0.3287999927997589},{"id":"https://openalex.org/keywords/competitive-intelligence","display_name":"Competitive intelligence","score":0.3172999918460846},{"id":"https://openalex.org/keywords/knowledge-sharing","display_name":"Knowledge sharing","score":0.30559998750686646}],"concepts":[{"id":"https://openalex.org/C2778137410","wikidata":"https://www.wikidata.org/wiki/Q2732820","display_name":"Government (linguistics)","level":2,"score":0.5956000089645386},{"id":"https://openalex.org/C56739046","wikidata":"https://www.wikidata.org/wiki/Q192060","display_name":"Knowledge management","level":1,"score":0.5212000012397766},{"id":"https://openalex.org/C2164484","wikidata":"https://www.wikidata.org/wiki/Q5170150","display_name":"Core (optical fiber)","level":2,"score":0.47189998626708984},{"id":"https://openalex.org/C144133560","wikidata":"https://www.wikidata.org/wiki/Q4830453","display_name":"Business","level":0,"score":0.4253999888896942},{"id":"https://openalex.org/C55587333","wikidata":"https://www.wikidata.org/wiki/Q1133029","display_name":"Engineering ethics","level":1,"score":0.37450000643730164},{"id":"https://openalex.org/C2779965156","wikidata":"https://www.wikidata.org/wiki/Q5227350","display_name":"Data sharing","level":3,"score":0.35100001096725464},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.34279999136924744},{"id":"https://openalex.org/C2776854237","wikidata":"https://www.wikidata.org/wiki/Q6031064","display_name":"Information sharing","level":2,"score":0.3287999927997589},{"id":"https://openalex.org/C103423482","wikidata":"https://www.wikidata.org/wiki/Q552515","display_name":"Competitive intelligence","level":2,"score":0.3172999918460846},{"id":"https://openalex.org/C17744445","wikidata":"https://www.wikidata.org/wiki/Q36442","display_name":"Political science","level":0,"score":0.31290000677108765},{"id":"https://openalex.org/C2776604539","wikidata":"https://www.wikidata.org/wiki/Q6423395","display_name":"Knowledge sharing","level":2,"score":0.30559998750686646},{"id":"https://openalex.org/C39549134","wikidata":"https://www.wikidata.org/wiki/Q133080","display_name":"Public relations","level":1,"score":0.30480000376701355},{"id":"https://openalex.org/C128487930","wikidata":"https://www.wikidata.org/wiki/Q579488","display_name":"Information management","level":2,"score":0.29019999504089355},{"id":"https://openalex.org/C121017731","wikidata":"https://www.wikidata.org/wiki/Q11661","display_name":"Information technology","level":2,"score":0.2694000005722046},{"id":"https://openalex.org/C2778938767","wikidata":"https://www.wikidata.org/wiki/Q1502043","display_name":"Rules of engagement","level":2,"score":0.2621999979019165},{"id":"https://openalex.org/C539667460","wikidata":"https://www.wikidata.org/wiki/Q2414942","display_name":"Management science","level":1,"score":0.2563999891281128},{"id":"https://openalex.org/C86275758","wikidata":"https://www.wikidata.org/wiki/Q376657","display_name":"Strategic management","level":2,"score":0.2558000087738037},{"id":"https://openalex.org/C2522767166","wikidata":"https://www.wikidata.org/wiki/Q2374463","display_name":"Data science","level":1,"score":0.2535000145435333},{"id":"https://openalex.org/C109986646","wikidata":"https://www.wikidata.org/wiki/Q546113","display_name":"Public policy","level":2,"score":0.25049999356269836}],"mesh":[{"descriptor_ui":"D000069550","descriptor_name":"Machine Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000069550","descriptor_name":"Machine Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000069550","descriptor_name":"Machine Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000069550","descriptor_name":"Machine Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000069550","descriptor_name":"Machine Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D004345","descriptor_name":"Drug Industry","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D004345","descriptor_name":"Drug Industry","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D004345","descriptor_name":"Drug Industry","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D004345","descriptor_name":"Drug Industry","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D004345","descriptor_name":"Drug Industry","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D064229","descriptor_name":"Biological Ontologies","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D064229","descriptor_name":"Biological Ontologies","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D064229","descriptor_name":"Biological Ontologies","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D064229","descriptor_name":"Biological Ontologies","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D064229","descriptor_name":"Biological Ontologies","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":4,"locations":[{"id":"doi:10.1093/database/baaf066","is_oa":true,"landing_page_url":"https://doi.org/10.1093/database/baaf066","pdf_url":"https://academic.oup.com/database/article-pdf/doi/10.1093/database/baaf066/64443357/baaf066.pdf","source":{"id":"https://openalex.org/S4210201630","display_name":"Database","issn_l":"1758-0463","issn":["1758-0463"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311647","host_organization_name":"University of Oxford","host_organization_lineage":["https://openalex.org/P4310311647"],"host_organization_lineage_names":["University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Database","raw_type":"journal-article"},{"id":"pmid:41026496","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/41026496","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Database : the journal of biological databases and curation","raw_type":null},{"id":"pmh:oai:europepmc.org:11293724","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/12482910","pdf_url":null,"source":{"id":"https://openalex.org/S4306400806","display_name":"Europe PMC (PubMed Central)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1303153112","host_organization_name":"European Bioinformatics Institute","host_organization_lineage":["https://openalex.org/I1303153112"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Text"},{"id":"pmh:oai:pubmedcentral.nih.gov:12482910","is_oa":true,"landing_page_url":"https://pmc.ncbi.nlm.nih.gov/articles/PMC12482910/","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Database (Oxford)","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1093/database/baaf066","is_oa":true,"landing_page_url":"https://doi.org/10.1093/database/baaf066","pdf_url":"https://academic.oup.com/database/article-pdf/doi/10.1093/database/baaf066/64443357/baaf066.pdf","source":{"id":"https://openalex.org/S4210201630","display_name":"Database","issn_l":"1758-0463","issn":["1758-0463"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311647","host_organization_name":"University of Oxford","host_organization_lineage":["https://openalex.org/P4310311647"],"host_organization_lineage_names":["University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Database","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W4414628428.pdf","grobid_xml":"https://content.openalex.org/works/W4414628428.grobid-xml"},"referenced_works_count":12,"referenced_works":["https://openalex.org/W2116034137","https://openalex.org/W2133465414","https://openalex.org/W2302501749","https://openalex.org/W2462007197","https://openalex.org/W2965518110","https://openalex.org/W4281661209","https://openalex.org/W4303685003","https://openalex.org/W4318025162","https://openalex.org/W4323036511","https://openalex.org/W4324130003","https://openalex.org/W4408728644","https://openalex.org/W6967084330"],"related_works":[],"abstract_inverted_index":{"Bioontologies":[0],"are":[1,32],"core":[2],"to":[3,79,82],"many":[4,18,25],"data":[5],"management":[6],"strategies,":[7],"artificial":[8],"intelligence":[9],"and":[10,14,37,43,61,74,88,96,99,117],"machine":[11],"learning":[12],"initiatives,":[13,42],"search":[15],"functionality":[16],"within":[17],"pharmaceutical":[19,75],"companies.":[20],"Despite":[21],"their":[22,29,38],"integral":[23],"role,":[24],"bioontologies,":[26],"along":[27],"with":[28,101],"associated":[30],"tools,":[31],"maintained":[33],"predominantly":[34],"by":[35],"academia":[36],"partners,":[39],"government":[40],"supported":[41],"the":[44,56,70,83],"general":[45],"community.":[46],"In":[47],"this":[48,59],"comment,":[49],"we":[50,105],"will":[51,106],"dive":[52],"into":[53],"some":[54],"of":[55,85],"reasons":[57],"behind":[58],"trend":[60],"argue":[62],"that":[63],"there":[64],"exists":[65],"a":[66],"mutual":[67],"advantage":[68],"for":[69,110],"life":[71],"science":[72],"industry,":[73],"companies":[76],"in":[77,121],"particular,":[78],"actively":[80],"contribute":[81],"advancement":[84],"public":[86],"ontologies":[87],"open-source":[89],"tools.":[90],"This":[91],"benefit":[92],"extends":[93],"beyond":[94],"ethical":[95],"moral":[97],"considerations":[98],"aligns":[100],"strategic":[102],"interests.":[103],"Additionally,":[104],"explore":[107],"practical":[108],"approaches":[109],"contributing,":[111],"sharing":[112],"our":[113],"(Novo":[114],"Nordisk's":[115],"research":[116],"early":[118],"development)":[119],"experience":[120],"doing":[122],"so.":[123]},"counts_by_year":[],"updated_date":"2026-03-20T23:20:44.827607","created_date":"2025-10-10T00:00:00"}
