{"id":"https://openalex.org/W4410539343","doi":"https://doi.org/10.1093/database/baaf008","title":"An exploratory study combining Virtual Reality and Semantic Web for life science research using Graph2VR","display_name":"An exploratory study combining Virtual Reality and Semantic Web for life science research using Graph2VR","publication_year":2025,"publication_date":"2025-01-01","ids":{"openalex":"https://openalex.org/W4410539343","doi":"https://doi.org/10.1093/database/baaf008","pmid":"https://pubmed.ncbi.nlm.nih.gov/40392751"},"language":"en","primary_location":{"id":"doi:10.1093/database/baaf008","is_oa":true,"landing_page_url":"https://doi.org/10.1093/database/baaf008","pdf_url":"https://academic.oup.com/database/article-pdf/doi/10.1093/database/baaf008/63244918/baaf008.pdf","source":{"id":"https://openalex.org/S4210201630","display_name":"Database","issn_l":"1758-0463","issn":["1758-0463"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311647","host_organization_name":"University of Oxford","host_organization_lineage":["https://openalex.org/P4310311647"],"host_organization_lineage_names":["University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Database","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://academic.oup.com/database/article-pdf/doi/10.1093/database/baaf008/63244918/baaf008.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5090909335","display_name":"Alexander Kellmann","orcid":"https://orcid.org/0000-0001-6108-5552"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Alexander J Kellmann","raw_affiliation_strings":[],"raw_orcid":"https://orcid.org/0000-0001-6108-5552","affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5055809827","display_name":"Sander van den Hoek","orcid":"https://orcid.org/0009-0004-3743-650X"},"institutions":[{"id":"https://openalex.org/I1334415907","display_name":"University Medical Center Groningen","ror":"https://ror.org/03cv38k47","country_code":"NL","type":"healthcare","lineage":["https://openalex.org/I1334415907"]}],"countries":["NL"],"is_corresponding":false,"raw_author_name":"Sander van den Hoek","raw_affiliation_strings":["Department of Genetics, Genomics Coordination Center, University Medical Center Groningen , Antonius Deusinglaan 1, Groningen, Groningen 9713 AV,"],"raw_orcid":"https://orcid.org/0009-0004-3743-650X","affiliations":[{"raw_affiliation_string":"Department of Genetics, Genomics Coordination Center, University Medical Center Groningen , Antonius Deusinglaan 1, Groningen, Groningen 9713 AV,","institution_ids":["https://openalex.org/I1334415907"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5109696722","display_name":"Max Postema","orcid":null},"institutions":[{"id":"https://openalex.org/I1334415907","display_name":"University Medical Center Groningen","ror":"https://ror.org/03cv38k47","country_code":"NL","type":"healthcare","lineage":["https://openalex.org/I1334415907"]}],"countries":["NL"],"is_corresponding":false,"raw_author_name":"Max Postema","raw_affiliation_strings":["Department of Genetics, Genomics Coordination Center, University Medical Center Groningen , Antonius Deusinglaan 1, Groningen, Groningen 9713 AV,"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Genetics, Genomics Coordination Center, University Medical Center Groningen , Antonius Deusinglaan 1, Groningen, Groningen 9713 AV,","institution_ids":["https://openalex.org/I1334415907"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5059272234","display_name":"W Maassen","orcid":"https://orcid.org/0000-0001-7086-0637"},"institutions":[{"id":"https://openalex.org/I1334415907","display_name":"University Medical Center Groningen","ror":"https://ror.org/03cv38k47","country_code":"NL","type":"healthcare","lineage":["https://openalex.org/I1334415907"]}],"countries":["NL"],"is_corresponding":false,"raw_author_name":"W T Kars Maassen","raw_affiliation_strings":["Department of Genetics, Genomics Coordination Center, University Medical Center Groningen , Antonius Deusinglaan 1, Groningen, Groningen 9713 AV,"],"raw_orcid":"https://orcid.org/0000-0001-7086-0637","affiliations":[{"raw_affiliation_string":"Department of Genetics, Genomics Coordination Center, University Medical Center Groningen , Antonius Deusinglaan 1, Groningen, Groningen 9713 AV,","institution_ids":["https://openalex.org/I1334415907"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5086906580","display_name":"Brenda S. Hijmans","orcid":"https://orcid.org/0000-0001-9937-2928"},"institutions":[{"id":"https://openalex.org/I1334415907","display_name":"University Medical Center Groningen","ror":"https://ror.org/03cv38k47","country_code":"NL","type":"healthcare","lineage":["https://openalex.org/I1334415907"]}],"countries":["NL"],"is_corresponding":false,"raw_author_name":"Brenda S Hijmans","raw_affiliation_strings":["Department of Genetics, Genomics Coordination Center, University Medical Center Groningen , Antonius Deusinglaan 1, Groningen, Groningen 9713 AV,"],"raw_orcid":"https://orcid.org/0000-0001-9937-2928","affiliations":[{"raw_affiliation_string":"Department of Genetics, Genomics Coordination Center, University Medical Center Groningen , Antonius Deusinglaan 1, Groningen, Groningen 9713 AV,","institution_ids":["https://openalex.org/I1334415907"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5089821623","display_name":"Marije A. van der Geest","orcid":"https://orcid.org/0000-0002-1919-6547"},"institutions":[{"id":"https://openalex.org/I1334415907","display_name":"University Medical Center Groningen","ror":"https://ror.org/03cv38k47","country_code":"NL","type":"healthcare","lineage":["https://openalex.org/I1334415907"]}],"countries":["NL"],"is_corresponding":false,"raw_author_name":"Marije A van der Geest","raw_affiliation_strings":["Department of Genetics, Genomics Coordination Center, University Medical Center Groningen , Antonius Deusinglaan 1, Groningen, Groningen 9713 AV,"],"raw_orcid":"https://orcid.org/0000-0002-1919-6547","affiliations":[{"raw_affiliation_string":"Department of Genetics, Genomics Coordination Center, University Medical Center Groningen , Antonius Deusinglaan 1, Groningen, Groningen 9713 AV,","institution_ids":["https://openalex.org/I1334415907"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5033039802","display_name":"K. Joeri van der Velde","orcid":"https://orcid.org/0000-0002-0934-8375"},"institutions":[{"id":"https://openalex.org/I1334415907","display_name":"University Medical Center Groningen","ror":"https://ror.org/03cv38k47","country_code":"NL","type":"healthcare","lineage":["https://openalex.org/I1334415907"]}],"countries":["NL"],"is_corresponding":false,"raw_author_name":"K Joeri van der Velde","raw_affiliation_strings":["Department of Genetics, Genomics Coordination Center, University Medical Center Groningen , Antonius Deusinglaan 1, Groningen, Groningen 9713 AV,"],"raw_orcid":"https://orcid.org/0000-0002-0934-8375","affiliations":[{"raw_affiliation_string":"Department of Genetics, Genomics Coordination Center, University Medical Center Groningen , Antonius Deusinglaan 1, Groningen, Groningen 9713 AV,","institution_ids":["https://openalex.org/I1334415907"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5001296067","display_name":"David van Enckevort","orcid":"https://orcid.org/0000-0002-2440-3993"},"institutions":[{"id":"https://openalex.org/I1334415907","display_name":"University Medical Center Groningen","ror":"https://ror.org/03cv38k47","country_code":"NL","type":"healthcare","lineage":["https://openalex.org/I1334415907"]}],"countries":["NL"],"is_corresponding":false,"raw_author_name":"Esther J van Enckevort","raw_affiliation_strings":["Department of Genetics, Genomics Coordination Center, University Medical Center Groningen , Antonius Deusinglaan 1, Groningen, Groningen 9713 AV,"],"raw_orcid":"https://orcid.org/0000-0002-2440-3993","affiliations":[{"raw_affiliation_string":"Department of Genetics, Genomics Coordination Center, University Medical Center Groningen , Antonius Deusinglaan 1, Groningen, Groningen 9713 AV,","institution_ids":["https://openalex.org/I1334415907"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5052368642","display_name":"Morris A. Swertz","orcid":"https://orcid.org/0000-0002-0979-3401"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Morris A Swertz","raw_affiliation_strings":[],"raw_orcid":"https://orcid.org/0000-0002-0979-3401","affiliations":[]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":1,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":{"value":1415,"currency":"GBP","value_usd":1735},"apc_paid":{"value":1415,"currency":"GBP","value_usd":1735},"fwci":0.0,"has_fulltext":false,"cited_by_count":0,"citation_normalized_percentile":{"value":0.08786099,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":null,"biblio":{"volume":"2025","issue":null,"first_page":null,"last_page":null},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9693999886512756,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9693999886512756,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11937","display_name":"Research Data Management Practices","score":0.9312000274658203,"subfield":{"id":"https://openalex.org/subfields/1710","display_name":"Information Systems"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T11986","display_name":"Scientific Computing and Data Management","score":0.9072999954223633,"subfield":{"id":"https://openalex.org/subfields/1802","display_name":"Information Systems and Management"},"field":{"id":"https://openalex.org/fields/18","display_name":"Decision Sciences"},"domain":{"id":"https://openalex.org/domains/2","display_name":"Social Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7247323989868164},{"id":"https://openalex.org/keywords/virtual-reality","display_name":"Virtual reality","score":0.6344709992408752},{"id":"https://openalex.org/keywords/world-wide-web","display_name":"World Wide Web","score":0.5816762447357178},{"id":"https://openalex.org/keywords/exploratory-research","display_name":"Exploratory research","score":0.5608528852462769},{"id":"https://openalex.org/keywords/semantic-web","display_name":"Semantic Web","score":0.5212453007698059},{"id":"https://openalex.org/keywords/information-retrieval","display_name":"Information retrieval","score":0.4885933995246887},{"id":"https://openalex.org/keywords/web-of-science","display_name":"Web of science","score":0.46483278274536133},{"id":"https://openalex.org/keywords/social-semantic-web","display_name":"Social Semantic Web","score":0.44479554891586304},{"id":"https://openalex.org/keywords/data-science","display_name":"Data science","score":0.3330012261867523},{"id":"https://openalex.org/keywords/human\u2013computer-interaction","display_name":"Human\u2013computer interaction","score":0.27789804339408875},{"id":"https://openalex.org/keywords/medline","display_name":"MEDLINE","score":0.10574054718017578},{"id":"https://openalex.org/keywords/sociology","display_name":"Sociology","score":0.07782742381095886}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7247323989868164},{"id":"https://openalex.org/C194969405","wikidata":"https://www.wikidata.org/wiki/Q170519","display_name":"Virtual reality","level":2,"score":0.6344709992408752},{"id":"https://openalex.org/C136764020","wikidata":"https://www.wikidata.org/wiki/Q466","display_name":"World Wide Web","level":1,"score":0.5816762447357178},{"id":"https://openalex.org/C85973986","wikidata":"https://www.wikidata.org/wiki/Q1091731","display_name":"Exploratory research","level":2,"score":0.5608528852462769},{"id":"https://openalex.org/C2129575","wikidata":"https://www.wikidata.org/wiki/Q54837","display_name":"Semantic Web","level":2,"score":0.5212453007698059},{"id":"https://openalex.org/C23123220","wikidata":"https://www.wikidata.org/wiki/Q816826","display_name":"Information retrieval","level":1,"score":0.4885933995246887},{"id":"https://openalex.org/C3020774429","wikidata":"https://www.wikidata.org/wiki/Q1201886","display_name":"Web of science","level":3,"score":0.46483278274536133},{"id":"https://openalex.org/C534406577","wikidata":"https://www.wikidata.org/wiki/Q7550843","display_name":"Social Semantic Web","level":3,"score":0.44479554891586304},{"id":"https://openalex.org/C2522767166","wikidata":"https://www.wikidata.org/wiki/Q2374463","display_name":"Data science","level":1,"score":0.3330012261867523},{"id":"https://openalex.org/C107457646","wikidata":"https://www.wikidata.org/wiki/Q207434","display_name":"Human\u2013computer interaction","level":1,"score":0.27789804339408875},{"id":"https://openalex.org/C2779473830","wikidata":"https://www.wikidata.org/wiki/Q1540899","display_name":"MEDLINE","level":2,"score":0.10574054718017578},{"id":"https://openalex.org/C144024400","wikidata":"https://www.wikidata.org/wiki/Q21201","display_name":"Sociology","level":0,"score":0.07782742381095886},{"id":"https://openalex.org/C199539241","wikidata":"https://www.wikidata.org/wiki/Q7748","display_name":"Law","level":1,"score":0.0},{"id":"https://openalex.org/C19165224","wikidata":"https://www.wikidata.org/wiki/Q23404","display_name":"Anthropology","level":1,"score":0.0},{"id":"https://openalex.org/C17744445","wikidata":"https://www.wikidata.org/wiki/Q36442","display_name":"Political science","level":0,"score":0.0}],"mesh":[{"descriptor_ui":"D000075403","descriptor_name":"Semantic Web","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000075403","descriptor_name":"Semantic Web","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000075403","descriptor_name":"Semantic Web","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000075403","descriptor_name":"Semantic Web","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000075403","descriptor_name":"Semantic Web","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000076142","descriptor_name":"Virtual Reality","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000076142","descriptor_name":"Virtual Reality","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000076142","descriptor_name":"Virtual Reality","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000076142","descriptor_name":"Virtual Reality","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000076142","descriptor_name":"Virtual Reality","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D001690","descriptor_name":"Biological Science Disciplines","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D001690","descriptor_name":"Biological Science Disciplines","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D001690","descriptor_name":"Biological Science Disciplines","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D001690","descriptor_name":"Biological Science Disciplines","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D001690","descriptor_name":"Biological Science Disciplines","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016208","descriptor_name":"Databases, Factual","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016208","descriptor_name":"Databases, Factual","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016208","descriptor_name":"Databases, Factual","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016208","descriptor_name":"Databases, Factual","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016208","descriptor_name":"Databases, Factual","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true}],"locations_count":6,"locations":[{"id":"doi:10.1093/database/baaf008","is_oa":true,"landing_page_url":"https://doi.org/10.1093/database/baaf008","pdf_url":"https://academic.oup.com/database/article-pdf/doi/10.1093/database/baaf008/63244918/baaf008.pdf","source":{"id":"https://openalex.org/S4210201630","display_name":"Database","issn_l":"1758-0463","issn":["1758-0463"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311647","host_organization_name":"University of Oxford","host_organization_lineage":["https://openalex.org/P4310311647"],"host_organization_lineage_names":["University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Database","raw_type":"journal-article"},{"id":"pmid:40392751","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/40392751","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Database : the journal of biological databases and curation","raw_type":null},{"id":"pmid:40402773","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/40402773","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Database : the journal of biological databases and curation","raw_type":null},{"id":"pmh:oai:pure.rug.nl:openaire_cris_publications/1182ec0c-542a-41d1-b342-1e30507a5cc0","is_oa":true,"landing_page_url":"https://research.rug.nl/en/publications/1182ec0c-542a-41d1-b342-1e30507a5cc0","pdf_url":null,"source":{"id":"https://openalex.org/S4306400420","display_name":"University of Groningen research database (University of Groningen / Centre for Information Technology)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I169381384","host_organization_name":"University of Groningen","host_organization_lineage":["https://openalex.org/I169381384"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Kellmann, A J, van den Hoek, S, Postema, M, Maassen, W T K, Hijmans, B S, van der Geest, M A, van der Velde, K J, van Enckevort, E J & Swertz, M A 2025, 'An exploratory study combining Virtual Reality and Semantic Web for life science research using Graph2VR', Database, vol. 2025, baaf008. https://doi.org/10.1093/database/baaf008","raw_type":"info:eu-repo/semantics/article"},{"id":"pmh:oai:pubmedcentral.nih.gov:12090995","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/12090995","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Database (Oxford)","raw_type":"Text"},{"id":"pmh:oai:pure.rug.nl:publications/1182ec0c-542a-41d1-b342-1e30507a5cc0","is_oa":true,"landing_page_url":"https://hdl.handle.net/11370/1182ec0c-542a-41d1-b342-1e30507a5cc0","pdf_url":null,"source":{"id":"https://openalex.org/S4306400420","display_name":"University of Groningen research database (University of Groningen / Centre for Information Technology)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I169381384","host_organization_name":"University of Groningen","host_organization_lineage":["https://openalex.org/I169381384"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Kellmann, A J, van den Hoek, S, Postema, M, Maassen, W T K, Hijmans, B S, van der Geest, M A, van der Velde, K J, van Enckevort, E J & Swertz, M A 2025, 'An exploratory study combining Virtual Reality and Semantic Web for life science research using Graph2VR', Database, vol. 2025, baaf008. https://doi.org/10.1093/database/baaf008","raw_type":"info:eu-repo/semantics/article"}],"best_oa_location":{"id":"doi:10.1093/database/baaf008","is_oa":true,"landing_page_url":"https://doi.org/10.1093/database/baaf008","pdf_url":"https://academic.oup.com/database/article-pdf/doi/10.1093/database/baaf008/63244918/baaf008.pdf","source":{"id":"https://openalex.org/S4210201630","display_name":"Database","issn_l":"1758-0463","issn":["1758-0463"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311647","host_organization_name":"University of Oxford","host_organization_lineage":["https://openalex.org/P4310311647"],"host_organization_lineage_names":["University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Database","raw_type":"journal-article"},"sustainable_development_goals":[{"score":0.41999998688697815,"display_name":"Responsible consumption and production","id":"https://metadata.un.org/sdg/12"}],"awards":[],"funders":[{"id":"https://openalex.org/F4320338342","display_name":"H2020 Health","ror":null}],"has_content":{"grobid_xml":false,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W4410539343.pdf"},"referenced_works_count":25,"referenced_works":["https://openalex.org/W103049419","https://openalex.org/W1852306145","https://openalex.org/W2110279208","https://openalex.org/W2144427809","https://openalex.org/W2175849758","https://openalex.org/W2242459625","https://openalex.org/W2261812172","https://openalex.org/W2413622533","https://openalex.org/W2556048034","https://openalex.org/W2767891136","https://openalex.org/W2779894632","https://openalex.org/W2896674134","https://openalex.org/W3080696152","https://openalex.org/W3130653811","https://openalex.org/W3136214776","https://openalex.org/W3164367431","https://openalex.org/W3215142683","https://openalex.org/W4240422607","https://openalex.org/W4306317769","https://openalex.org/W4311287007","https://openalex.org/W4367164996","https://openalex.org/W4393334842","https://openalex.org/W4394822448","https://openalex.org/W6746534341","https://openalex.org/W6864114234"],"related_works":["https://openalex.org/W2416704114","https://openalex.org/W2349698472","https://openalex.org/W1975429881","https://openalex.org/W2366430559","https://openalex.org/W2025728896","https://openalex.org/W2013055153","https://openalex.org/W1985801232","https://openalex.org/W1585941060","https://openalex.org/W4211114681","https://openalex.org/W2174306336"],"abstract_inverted_index":{"We":[0,137],"previously":[1],"described":[2],"Graph2VR,":[3],"a":[4,66,99],"prototype":[5],"that":[6,139],"enables":[7],"researchers":[8],"to":[9,14],"use":[10,31,39,43,63,95],"virtual":[11],"reality":[12],"(VR)":[13],"explore":[15],"and":[16,54,84,128,159,166],"navigate":[17],"through":[18,79],"Linked":[19],"Data":[20],"graphs":[21],"using":[22],"SPARQL":[23],"queries":[24],"(see":[25],"https://doi.org/10.1093/database/baae008).":[26],"Here":[27],"we":[28,160],"evaluate":[29],"the":[30,57,80,107,115,140,152],"of":[32,68,134,154],"Graph2VR":[33],"in":[34,104],"three":[35],"realistic":[36],"life":[37],"science":[38],"cases.":[40],"The":[41,61,93],"first":[42],"case":[44,64,96],"visualizes":[45],"metadata":[46],"from":[47,71,117],"large-scale":[48],"multi-center":[49],"cohort":[50],"studies":[51],"across":[52],"Europe":[53],"Canada":[55],"via":[56],"EUCAN":[58],"Connect":[59],"catalogue.":[60],"second":[62],"involves":[65,97],"set":[67],"genomic":[69],"data":[70,126,164],"synthetic":[72],"rare":[73],"disease":[74],"patients,":[75],"which":[76],"was":[77],"processed":[78],"Variant":[81],"Interpretation":[82],"Pipeline":[83],"then":[85],"converted":[86],"into":[87],"Resource":[88],"Description":[89],"Format":[90],"for":[91,125,151,163],"visualization.":[92],"third":[94],"enriching":[98],"graph":[100],"with":[101,114],"additional":[102],"information,":[103],"this":[105],"case,":[106],"Dutch":[108],"Anatomical":[109],"Therapeutic":[110],"Chemical":[111],"code":[112],"Ontology":[113],"DrugID":[116],"Drugbank.":[118],"These":[119],"examples":[120],"collectively":[121],"showcase":[122],"Graph2VR's":[123],"potential":[124,150],"exploration":[127],"enrichment,":[129],"as":[130,132],"well":[131],"some":[133],"its":[135],"limitations.":[136],"conclude":[138],"endless":[141],"three-dimensional":[142],"space":[143],"provided":[144],"by":[145],"VR":[146,167],"indeed":[147],"shows":[148],"much":[149],"navigation":[153],"very":[155],"large":[156],"knowledge":[157],"graphs,":[158],"provide":[161],"recommendations":[162],"preparation":[165],"tooling":[168],"moving":[169],"forward.":[170],"Database":[171],"URL:":[172],"https://doi.org/10.1093/database/baaf008.":[173]},"counts_by_year":[],"updated_date":"2026-05-21T06:26:12.895304","created_date":"2025-10-10T00:00:00"}
