{"id":"https://openalex.org/W4401413215","doi":"https://doi.org/10.1093/database/baae069","title":"The overview of the BioRED (Biomedical Relation Extraction Dataset) track at BioCreative VIII","display_name":"The overview of the BioRED (Biomedical Relation Extraction Dataset) track at BioCreative VIII","publication_year":2024,"publication_date":"2024-01-01","ids":{"openalex":"https://openalex.org/W4401413215","doi":"https://doi.org/10.1093/database/baae069","pmid":"https://pubmed.ncbi.nlm.nih.gov/39114977"},"language":"en","primary_location":{"id":"doi:10.1093/database/baae069","is_oa":true,"landing_page_url":"https://doi.org/10.1093/database/baae069","pdf_url":null,"source":{"id":"https://openalex.org/S4210201630","display_name":"Database","issn_l":"1758-0463","issn":["1758-0463"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311647","host_organization_name":"University of Oxford","host_organization_lineage":["https://openalex.org/P4310311647"],"host_organization_lineage_names":["University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Database","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","datacite","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://doi.org/10.1093/database/baae069","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5008126200","display_name":"Rezarta Islamaj","orcid":"https://orcid.org/0000-0001-5651-1860"},"institutions":[{"id":"https://openalex.org/I1299303238","display_name":"National Institutes of Health","ror":"https://ror.org/01cwqze88","country_code":"US","type":"government","lineage":["https://openalex.org/I1299022934","https://openalex.org/I1299303238"]},{"id":"https://openalex.org/I4210109390","display_name":"National Center for Biotechnology Information","ror":"https://ror.org/02meqm098","country_code":"US","type":"facility","lineage":["https://openalex.org/I1299022934","https://openalex.org/I1299303238","https://openalex.org/I2800548410","https://openalex.org/I4210109390"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Rezarta Islamaj","raw_affiliation_strings":["National Center for Biotechnology Information (NCBI), National Library of Medicine (NLM), National Institutes of Health (NIH) , 8600 Rockville Pike, Bethesda, MD 20894,"],"raw_orcid":"https://orcid.org/0000-0001-5651-1860","affiliations":[{"raw_affiliation_string":"National Center for Biotechnology Information (NCBI), National Library of Medicine (NLM), National Institutes of Health (NIH) , 8600 Rockville Pike, Bethesda, MD 20894,","institution_ids":["https://openalex.org/I4210109390","https://openalex.org/I1299303238"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5113325465","display_name":"Po-Ting Lai","orcid":null},"institutions":[{"id":"https://openalex.org/I1299303238","display_name":"National Institutes of Health","ror":"https://ror.org/01cwqze88","country_code":"US","type":"government","lineage":["https://openalex.org/I1299022934","https://openalex.org/I1299303238"]},{"id":"https://openalex.org/I4210109390","display_name":"National Center for Biotechnology Information","ror":"https://ror.org/02meqm098","country_code":"US","type":"facility","lineage":["https://openalex.org/I1299022934","https://openalex.org/I1299303238","https://openalex.org/I2800548410","https://openalex.org/I4210109390"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Po-Ting Lai","raw_affiliation_strings":["National Center for Biotechnology Information (NCBI), National Library of Medicine (NLM), National Institutes of Health (NIH) , 8600 Rockville Pike, Bethesda, MD 20894,"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"National Center for Biotechnology Information (NCBI), National Library of Medicine (NLM), National Institutes of Health (NIH) , 8600 Rockville Pike, Bethesda, MD 20894,","institution_ids":["https://openalex.org/I4210109390","https://openalex.org/I1299303238"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5058918482","display_name":"Chih-Hsuan Wei","orcid":"https://orcid.org/0000-0001-5094-7321"},"institutions":[{"id":"https://openalex.org/I1299303238","display_name":"National Institutes of Health","ror":"https://ror.org/01cwqze88","country_code":"US","type":"government","lineage":["https://openalex.org/I1299022934","https://openalex.org/I1299303238"]},{"id":"https://openalex.org/I4210109390","display_name":"National Center for Biotechnology Information","ror":"https://ror.org/02meqm098","country_code":"US","type":"facility","lineage":["https://openalex.org/I1299022934","https://openalex.org/I1299303238","https://openalex.org/I2800548410","https://openalex.org/I4210109390"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Chih-Hsuan Wei","raw_affiliation_strings":["National Center for Biotechnology Information (NCBI), National Library of Medicine (NLM), National Institutes of Health (NIH) , 8600 Rockville Pike, Bethesda, MD 20894,"],"raw_orcid":"https://orcid.org/0000-0001-5094-7321","affiliations":[{"raw_affiliation_string":"National Center for Biotechnology Information (NCBI), National Library of Medicine (NLM), National Institutes of Health (NIH) , 8600 Rockville Pike, Bethesda, MD 20894,","institution_ids":["https://openalex.org/I4210109390","https://openalex.org/I1299303238"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100619435","display_name":"Ling Luo","orcid":"https://orcid.org/0000-0002-5141-0259"},"institutions":[{"id":"https://openalex.org/I27357992","display_name":"Dalian University of Technology","ror":"https://ror.org/023hj5876","country_code":"CN","type":"education","lineage":["https://openalex.org/I27357992"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Ling Luo","raw_affiliation_strings":["School of Computer Science and Technology, Dalian University of Technology , No. 2 Linggong Road, Ganjingzi District, Dalian 116024,"],"raw_orcid":"https://orcid.org/0000-0002-5141-0259","affiliations":[{"raw_affiliation_string":"School of Computer Science and Technology, Dalian University of Technology , No. 2 Linggong Road, Ganjingzi District, Dalian 116024,","institution_ids":["https://openalex.org/I27357992"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5017535544","display_name":"Tiago Almeida","orcid":"https://orcid.org/0000-0002-4258-3350"},"institutions":[{"id":"https://openalex.org/I60858718","display_name":"University of Aveiro","ror":"https://ror.org/00nt41z93","country_code":"PT","type":"education","lineage":["https://openalex.org/I60858718"]}],"countries":["PT"],"is_corresponding":false,"raw_author_name":"Tiago Almeida","raw_affiliation_strings":["Department of Electronics, Telecommunications and Informatics (DETI), Institute of Electronics and Informatics Engineering of Aveiro (IEETA), University of Aveiro , Campus Universit\u00e1rio de Santiago, Aveiro 3810-193,"],"raw_orcid":"https://orcid.org/0000-0002-4258-3350","affiliations":[{"raw_affiliation_string":"Department of Electronics, Telecommunications and Informatics (DETI), Institute of Electronics and Informatics Engineering of Aveiro (IEETA), University of Aveiro , Campus Universit\u00e1rio de Santiago, Aveiro 3810-193,","institution_ids":["https://openalex.org/I60858718"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5052410986","display_name":"Richard Adolph Aires Jonker","orcid":"https://orcid.org/0000-0002-3806-6940"},"institutions":[{"id":"https://openalex.org/I60858718","display_name":"University of Aveiro","ror":"https://ror.org/00nt41z93","country_code":"PT","type":"education","lineage":["https://openalex.org/I60858718"]}],"countries":["PT"],"is_corresponding":false,"raw_author_name":"Richard A. A Jonker","raw_affiliation_strings":["Department of Electronics, Telecommunications and Informatics (DETI), Institute of Electronics and Informatics Engineering of Aveiro (IEETA), University of Aveiro , Campus Universit\u00e1rio de Santiago, Aveiro 3810-193,"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Electronics, Telecommunications and Informatics (DETI), Institute of Electronics and Informatics Engineering of Aveiro (IEETA), University of Aveiro , Campus Universit\u00e1rio de Santiago, Aveiro 3810-193,","institution_ids":["https://openalex.org/I60858718"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5083425095","display_name":"Sofia I. R. Concei\u00e7\u00e3o","orcid":"https://orcid.org/0000-0002-8891-3546"},"institutions":[{"id":"https://openalex.org/I141596103","display_name":"University of Lisbon","ror":"https://ror.org/01c27hj86","country_code":"PT","type":"education","lineage":["https://openalex.org/I141596103"]}],"countries":["PT"],"is_corresponding":false,"raw_author_name":"Sofia I. R Concei\u00e7\u00e3o","raw_affiliation_strings":["Departamento de Inform\u00e1tica, Faculdade de Ci\u00eancias da Universidade de Lisboa , Edif\u00edcio C6 Campo Grande, Lisbon 1749-016,"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Departamento de Inform\u00e1tica, Faculdade de Ci\u00eancias da Universidade de Lisboa , Edif\u00edcio C6 Campo Grande, Lisbon 1749-016,","institution_ids":["https://openalex.org/I141596103"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5075883524","display_name":"Diana Sousa","orcid":"https://orcid.org/0000-0003-0597-9273"},"institutions":[{"id":"https://openalex.org/I141596103","display_name":"University of Lisbon","ror":"https://ror.org/01c27hj86","country_code":"PT","type":"education","lineage":["https://openalex.org/I141596103"]}],"countries":["PT"],"is_corresponding":false,"raw_author_name":"Diana F Sousa","raw_affiliation_strings":["Departamento de Inform\u00e1tica, Faculdade de Ci\u00eancias da Universidade de Lisboa , Edif\u00edcio C6 Campo Grande, Lisbon 1749-016,"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Departamento de Inform\u00e1tica, Faculdade de Ci\u00eancias da Universidade de Lisboa , Edif\u00edcio C6 Campo Grande, Lisbon 1749-016,","institution_ids":["https://openalex.org/I141596103"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5035697087","display_name":"Cong-Phuoc Phan","orcid":null},"institutions":[{"id":"https://openalex.org/I91807558","display_name":"National Cheng Kung University","ror":"https://ror.org/01b8kcc49","country_code":"TW","type":"education","lineage":["https://openalex.org/I91807558"]}],"countries":["TW"],"is_corresponding":false,"raw_author_name":"Cong-Phuoc Phan","raw_affiliation_strings":["Department of Computer Science and Information Engineering, National Cheng Kung University , No.1, University Road, Tainan City 701,"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Computer Science and Information Engineering, National Cheng Kung University , No.1, University Road, Tainan City 701,","institution_ids":["https://openalex.org/I91807558"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5062802526","display_name":"Jung-Hsien Chiang","orcid":"https://orcid.org/0000-0002-4657-6705"},"institutions":[{"id":"https://openalex.org/I91807558","display_name":"National Cheng Kung University","ror":"https://ror.org/01b8kcc49","country_code":"TW","type":"education","lineage":["https://openalex.org/I91807558"]}],"countries":["TW"],"is_corresponding":false,"raw_author_name":"Jung-Hsien Chiang","raw_affiliation_strings":["Department of Computer Science and Information Engineering, National Cheng Kung University , No.1, University Road, Tainan City 701,"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Computer Science and Information Engineering, National Cheng Kung University , No.1, University Road, Tainan City 701,","institution_ids":["https://openalex.org/I91807558"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5000155122","display_name":"Jiru Li","orcid":"https://orcid.org/0009-0001-8093-9784"},"institutions":[{"id":"https://openalex.org/I27357992","display_name":"Dalian University of Technology","ror":"https://ror.org/023hj5876","country_code":"CN","type":"education","lineage":["https://openalex.org/I27357992"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Jiru Li","raw_affiliation_strings":["School of Computer Science and Technology, Dalian University of Technology , No. 2 Linggong Road, Ganjingzi District, Dalian 116024,"],"raw_orcid":"https://orcid.org/0009-0001-8093-9784","affiliations":[{"raw_affiliation_string":"School of Computer Science and Technology, Dalian University of Technology , No. 2 Linggong Road, Ganjingzi District, Dalian 116024,","institution_ids":["https://openalex.org/I27357992"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5011669334","display_name":"Dinghao Pan","orcid":"https://orcid.org/0000-0002-9941-6588"},"institutions":[{"id":"https://openalex.org/I27357992","display_name":"Dalian University of Technology","ror":"https://ror.org/023hj5876","country_code":"CN","type":"education","lineage":["https://openalex.org/I27357992"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Dinghao Pan","raw_affiliation_strings":["School of Computer Science and Technology, Dalian University of Technology , No. 2 Linggong Road, Ganjingzi District, Dalian 116024,"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Computer Science and Technology, Dalian University of Technology , No. 2 Linggong Road, Ganjingzi District, Dalian 116024,","institution_ids":["https://openalex.org/I27357992"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5106356296","display_name":"Wilailack Meesawad","orcid":null},"institutions":[{"id":"https://openalex.org/I22265921","display_name":"National Central University","ror":"https://ror.org/00944ve71","country_code":"TW","type":"education","lineage":["https://openalex.org/I22265921"]}],"countries":["TW"],"is_corresponding":false,"raw_author_name":"Wilailack Meesawad","raw_affiliation_strings":["Department of Computer Science and Information Engineering, National Central University , No. 300, Zhongda Rd., Zhongli District, Taoyuan City 32001,"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Computer Science and Information Engineering, National Central University , No. 300, Zhongda Rd., Zhongli District, Taoyuan City 32001,","institution_ids":["https://openalex.org/I22265921"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5030771512","display_name":"Richard Tzong\u2010Han Tsai","orcid":"https://orcid.org/0000-0003-0513-107X"},"institutions":[{"id":"https://openalex.org/I22265921","display_name":"National Central University","ror":"https://ror.org/00944ve71","country_code":"TW","type":"education","lineage":["https://openalex.org/I22265921"]},{"id":"https://openalex.org/I4210150355","display_name":"Research Center for Humanities and Social Sciences, Academia Sinica","ror":"https://ror.org/05n4swm55","country_code":"TW","type":"facility","lineage":["https://openalex.org/I4210150355","https://openalex.org/I84653119"]}],"countries":["TW"],"is_corresponding":false,"raw_author_name":"Richard Tzong-Han Tsai","raw_affiliation_strings":["Department of Computer Science and Information Engineering, National Central University , No. 300, Zhongda Rd., Zhongli District, Taoyuan City 32001,","Research Center for Humanities and Social Sciences, Academia Sinica , No. 128, Section 2, Academia Rd., Nangang District, Taoyuan City 115201,"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Computer Science and Information Engineering, National Central University , No. 300, Zhongda Rd., Zhongli District, Taoyuan City 32001,","institution_ids":["https://openalex.org/I22265921"]},{"raw_affiliation_string":"Research Center for Humanities and Social Sciences, Academia Sinica , No. 128, Section 2, Academia Rd., Nangang District, Taoyuan City 115201,","institution_ids":["https://openalex.org/I4210150355"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5047546994","display_name":"M. Janina Sarol","orcid":"https://orcid.org/0000-0002-0991-4429"},"institutions":[{"id":"https://openalex.org/I157725225","display_name":"University of Illinois Urbana-Champaign","ror":"https://ror.org/047426m28","country_code":"US","type":"education","lineage":["https://openalex.org/I157725225"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"M. Janina Sarol","raw_affiliation_strings":["School of Information Sciences, University of Illinois at Urbana-Champaign , 614 E. Daniel St, Champaign, IL 61820,"],"raw_orcid":"https://orcid.org/0000-0002-0991-4429","affiliations":[{"raw_affiliation_string":"School of Information Sciences, University of Illinois at Urbana-Champaign , 614 E. Daniel St, Champaign, IL 61820,","institution_ids":["https://openalex.org/I157725225"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5058682631","display_name":"Gibong Hong","orcid":null},"institutions":[{"id":"https://openalex.org/I157725225","display_name":"University of Illinois Urbana-Champaign","ror":"https://ror.org/047426m28","country_code":"US","type":"education","lineage":["https://openalex.org/I157725225"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Gibong Hong","raw_affiliation_strings":["School of Information Sciences, University of Illinois at Urbana-Champaign , 614 E. Daniel St, Champaign, IL 61820,"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Information Sciences, University of Illinois at Urbana-Champaign , 614 E. Daniel St, Champaign, IL 61820,","institution_ids":["https://openalex.org/I157725225"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5039412670","display_name":"Airat Valiev","orcid":null},"institutions":[{"id":"https://openalex.org/I118501908","display_name":"National Research University Higher School of Economics","ror":"https://ror.org/055f7t516","country_code":"RU","type":"education","lineage":["https://openalex.org/I118501908"]}],"countries":["RU"],"is_corresponding":false,"raw_author_name":"Airat Valiev","raw_affiliation_strings":["Higher School of Economics University , 20 Myasnitskaya St, Moscow 101000,"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Higher School of Economics University , 20 Myasnitskaya St, Moscow 101000,","institution_ids":["https://openalex.org/I118501908"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5012311258","display_name":"Elena Tutubalina","orcid":"https://orcid.org/0000-0001-7936-0284"},"institutions":[{"id":"https://openalex.org/I21203515","display_name":"Kazan Federal University","ror":"https://ror.org/05256ym39","country_code":"RU","type":"education","lineage":["https://openalex.org/I21203515"]},{"id":"https://openalex.org/I4392021246","display_name":"AIRI - Artificial Intelligence Research Institute","ror":"https://ror.org/014a87f14","country_code":"RU","type":"nonprofit","lineage":["https://openalex.org/I4392021246"]}],"countries":["RU"],"is_corresponding":false,"raw_author_name":"Elena Tutubalina","raw_affiliation_strings":["Artificial Intelligence Research Institute (AIRI) , 32 Kutuzovskiy St, Moscow 121170,","Kazan Federal University , 18 Kremlevskaya St, Kazan 420008,"],"raw_orcid":"https://orcid.org/0000-0001-7936-0284","affiliations":[{"raw_affiliation_string":"Artificial Intelligence Research Institute (AIRI) , 32 Kutuzovskiy St, Moscow 121170,","institution_ids":["https://openalex.org/I4392021246"]},{"raw_affiliation_string":"Kazan Federal University , 18 Kremlevskaya St, Kazan 420008,","institution_ids":["https://openalex.org/I21203515"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5079690438","display_name":"Shao-Man Lee","orcid":"https://orcid.org/0000-0001-7801-4742"},"institutions":[{"id":"https://openalex.org/I91807558","display_name":"National Cheng Kung University","ror":"https://ror.org/01b8kcc49","country_code":"TW","type":"education","lineage":["https://openalex.org/I91807558"]}],"countries":["TW"],"is_corresponding":false,"raw_author_name":"Shao-Man Lee","raw_affiliation_strings":["Miin Wu School of Computing, National Cheng Kung University , No. 1, University Road, Tainan 701, Taiwan,"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Miin Wu School of Computing, National Cheng Kung University , No. 1, University Road, Tainan 701, Taiwan,","institution_ids":["https://openalex.org/I91807558"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5084428660","display_name":"Yi-Yu Hsu","orcid":"https://orcid.org/0000-0003-4286-3181"},"institutions":[{"id":"https://openalex.org/I91807558","display_name":"National Cheng Kung University","ror":"https://ror.org/01b8kcc49","country_code":"TW","type":"education","lineage":["https://openalex.org/I91807558"]}],"countries":["TW"],"is_corresponding":false,"raw_author_name":"Yi-Yu Hsu","raw_affiliation_strings":["Miin Wu School of Computing, National Cheng Kung University , No. 1, University Road, Tainan 701,"],"raw_orcid":"https://orcid.org/0000-0003-4286-3181","affiliations":[{"raw_affiliation_string":"Miin Wu School of Computing, National Cheng Kung University , No. 1, University Road, Tainan 701,","institution_ids":["https://openalex.org/I91807558"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100416259","display_name":"Mingjie Li","orcid":"https://orcid.org/0000-0002-1588-2654"},"institutions":[{"id":"https://openalex.org/I82951845","display_name":"RMIT University","ror":"https://ror.org/04ttjf776","country_code":"AU","type":"education","lineage":["https://openalex.org/I82951845"]}],"countries":["AU"],"is_corresponding":false,"raw_author_name":"Mingjie Li","raw_affiliation_strings":["School of Computing Technologies, RMIT University , 124 La Trobe Street, Melbourne, Victoria 3000,"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Computing Technologies, RMIT University , 124 La Trobe Street, Melbourne, Victoria 3000,","institution_ids":["https://openalex.org/I82951845"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5067214173","display_name":"Karin Verspoor","orcid":"https://orcid.org/0000-0002-8661-1544"},"institutions":[{"id":"https://openalex.org/I82951845","display_name":"RMIT University","ror":"https://ror.org/04ttjf776","country_code":"AU","type":"education","lineage":["https://openalex.org/I82951845"]}],"countries":["AU"],"is_corresponding":false,"raw_author_name":"Karin Verspoor","raw_affiliation_strings":["School of Computing Technologies, RMIT University , 124 La Trobe Street, Melbourne, Victoria 3000,"],"raw_orcid":"https://orcid.org/0000-0002-8661-1544","affiliations":[{"raw_affiliation_string":"School of Computing Technologies, RMIT University , 124 La Trobe Street, Melbourne, Victoria 3000,","institution_ids":["https://openalex.org/I82951845"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5083081872","display_name":"Zhiyong Lu","orcid":"https://orcid.org/0000-0001-9998-916X"},"institutions":[{"id":"https://openalex.org/I1299303238","display_name":"National Institutes of Health","ror":"https://ror.org/01cwqze88","country_code":"US","type":"government","lineage":["https://openalex.org/I1299022934","https://openalex.org/I1299303238"]},{"id":"https://openalex.org/I4210109390","display_name":"National Center for Biotechnology Information","ror":"https://ror.org/02meqm098","country_code":"US","type":"facility","lineage":["https://openalex.org/I1299022934","https://openalex.org/I1299303238","https://openalex.org/I2800548410","https://openalex.org/I4210109390"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Zhiyong Lu","raw_affiliation_strings":["National Center for Biotechnology Information (NCBI), National Library of Medicine (NLM), National Institutes of Health (NIH) , 8600 Rockville Pike, Bethesda, MD 20894,"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"National Center for Biotechnology Information (NCBI), National Library of Medicine (NLM), National Institutes of Health (NIH) , 8600 Rockville Pike, Bethesda, MD 20894,","institution_ids":["https://openalex.org/I4210109390","https://openalex.org/I1299303238"]}]}],"institutions":[],"countries_distinct_count":6,"institutions_distinct_count":23,"corresponding_author_ids":["https://openalex.org/A5008126200"],"corresponding_institution_ids":["https://openalex.org/I1299303238","https://openalex.org/I4210109390"],"apc_list":{"value":1415,"currency":"GBP","value_usd":1735},"apc_paid":{"value":1415,"currency":"GBP","value_usd":1735},"fwci":1.6882,"has_fulltext":false,"cited_by_count":8,"citation_normalized_percentile":{"value":0.8402346,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":95,"max":98},"biblio":{"volume":"2024","issue":null,"first_page":null,"last_page":null},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9995999932289124,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9995999932289124,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10028","display_name":"Topic Modeling","score":0.9951000213623047,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10181","display_name":"Natural Language Processing Techniques","score":0.9754999876022339,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/novelty","display_name":"Novelty","score":0.8969487547874451},{"id":"https://openalex.org/keywords/relation","display_name":"Relation (database)","score":0.8049648404121399},{"id":"https://openalex.org/keywords/relationship-extraction","display_name":"Relationship extraction","score":0.7673089504241943},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7612888813018799},{"id":"https://openalex.org/keywords/identification","display_name":"Identification (biology)","score":0.7558116316795349},{"id":"https://openalex.org/keywords/categorization","display_name":"Categorization","score":0.715694785118103},{"id":"https://openalex.org/keywords/natural-language-processing","display_name":"Natural language processing","score":0.5874984860420227},{"id":"https://openalex.org/keywords/information-retrieval","display_name":"Information retrieval","score":0.5857300162315369},{"id":"https://openalex.org/keywords/identifier","display_name":"Identifier","score":0.5757682919502258},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.5627371668815613},{"id":"https://openalex.org/keywords/named-entity-recognition","display_name":"Named-entity recognition","score":0.4458777606487274},{"id":"https://openalex.org/keywords/track","display_name":"Track (disk drive)","score":0.43068018555641174},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.25872763991355896},{"id":"https://openalex.org/keywords/task","display_name":"Task (project management)","score":0.16490799188613892},{"id":"https://openalex.org/keywords/psychology","display_name":"Psychology","score":0.06602472066879272},{"id":"https://openalex.org/keywords/engineering","display_name":"Engineering","score":0.06512528657913208}],"concepts":[{"id":"https://openalex.org/C2778738651","wikidata":"https://www.wikidata.org/wiki/Q16546687","display_name":"Novelty","level":2,"score":0.8969487547874451},{"id":"https://openalex.org/C25343380","wikidata":"https://www.wikidata.org/wiki/Q277521","display_name":"Relation (database)","level":2,"score":0.8049648404121399},{"id":"https://openalex.org/C153604712","wikidata":"https://www.wikidata.org/wiki/Q7310755","display_name":"Relationship extraction","level":3,"score":0.7673089504241943},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7612888813018799},{"id":"https://openalex.org/C116834253","wikidata":"https://www.wikidata.org/wiki/Q2039217","display_name":"Identification (biology)","level":2,"score":0.7558116316795349},{"id":"https://openalex.org/C94124525","wikidata":"https://www.wikidata.org/wiki/Q912550","display_name":"Categorization","level":2,"score":0.715694785118103},{"id":"https://openalex.org/C204321447","wikidata":"https://www.wikidata.org/wiki/Q30642","display_name":"Natural language processing","level":1,"score":0.5874984860420227},{"id":"https://openalex.org/C23123220","wikidata":"https://www.wikidata.org/wiki/Q816826","display_name":"Information retrieval","level":1,"score":0.5857300162315369},{"id":"https://openalex.org/C154504017","wikidata":"https://www.wikidata.org/wiki/Q853614","display_name":"Identifier","level":2,"score":0.5757682919502258},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.5627371668815613},{"id":"https://openalex.org/C2779135771","wikidata":"https://www.wikidata.org/wiki/Q403574","display_name":"Named-entity recognition","level":3,"score":0.4458777606487274},{"id":"https://openalex.org/C89992363","wikidata":"https://www.wikidata.org/wiki/Q5961558","display_name":"Track (disk drive)","level":2,"score":0.43068018555641174},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.25872763991355896},{"id":"https://openalex.org/C2780451532","wikidata":"https://www.wikidata.org/wiki/Q759676","display_name":"Task (project management)","level":2,"score":0.16490799188613892},{"id":"https://openalex.org/C15744967","wikidata":"https://www.wikidata.org/wiki/Q9418","display_name":"Psychology","level":0,"score":0.06602472066879272},{"id":"https://openalex.org/C127413603","wikidata":"https://www.wikidata.org/wiki/Q11023","display_name":"Engineering","level":0,"score":0.06512528657913208},{"id":"https://openalex.org/C111919701","wikidata":"https://www.wikidata.org/wiki/Q9135","display_name":"Operating system","level":1,"score":0.0},{"id":"https://openalex.org/C59822182","wikidata":"https://www.wikidata.org/wiki/Q441","display_name":"Botany","level":1,"score":0.0},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.0},{"id":"https://openalex.org/C201995342","wikidata":"https://www.wikidata.org/wiki/Q682496","display_name":"Systems engineering","level":1,"score":0.0},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.0},{"id":"https://openalex.org/C77805123","wikidata":"https://www.wikidata.org/wiki/Q161272","display_name":"Social psychology","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D009323","descriptor_name":"Natural Language Processing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D009323","descriptor_name":"Natural Language Processing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D009323","descriptor_name":"Natural Language Processing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D009323","descriptor_name":"Natural Language Processing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D009323","descriptor_name":"Natural Language Processing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D009323","descriptor_name":"Natural Language Processing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D009323","descriptor_name":"Natural Language Processing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012660","descriptor_name":"Semantics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012660","descriptor_name":"Semantics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012660","descriptor_name":"Semantics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012660","descriptor_name":"Semantics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012660","descriptor_name":"Semantics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012660","descriptor_name":"Semantics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012660","descriptor_name":"Semantics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016208","descriptor_name":"Databases, Factual","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016208","descriptor_name":"Databases, Factual","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016208","descriptor_name":"Databases, Factual","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016208","descriptor_name":"Databases, Factual","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016208","descriptor_name":"Databases, Factual","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016208","descriptor_name":"Databases, Factual","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016208","descriptor_name":"Databases, Factual","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D057225","descriptor_name":"Data Mining","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D057225","descriptor_name":"Data Mining","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D057225","descriptor_name":"Data Mining","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D057225","descriptor_name":"Data Mining","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D057225","descriptor_name":"Data Mining","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D057225","descriptor_name":"Data Mining","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D057225","descriptor_name":"Data Mining","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true}],"locations_count":4,"locations":[{"id":"doi:10.1093/database/baae069","is_oa":true,"landing_page_url":"https://doi.org/10.1093/database/baae069","pdf_url":null,"source":{"id":"https://openalex.org/S4210201630","display_name":"Database","issn_l":"1758-0463","issn":["1758-0463"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311647","host_organization_name":"University of Oxford","host_organization_lineage":["https://openalex.org/P4310311647"],"host_organization_lineage_names":["University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Database","raw_type":"journal-article"},{"id":"pmid:39114977","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/39114977","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Database : the journal of biological databases and curation","raw_type":null},{"id":"pmh:oai:pubmedcentral.nih.gov:11306928","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/11306928","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"public-domain","license_id":"https://openalex.org/licenses/public-domain","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Database (Oxford)","raw_type":"Text"},{"id":"doi:10.5281/zenodo.10351131","is_oa":true,"landing_page_url":"https://doi.org/10.5281/zenodo.10351131","pdf_url":null,"source":{"id":"https://openalex.org/S4306400562","display_name":"Zenodo (CERN European Organization for Nuclear Research)","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I67311998","host_organization_name":"European Organization for Nuclear Research","host_organization_lineage":["https://openalex.org/I67311998"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":null,"is_accepted":false,"is_published":null,"raw_source_name":null,"raw_type":"article"}],"best_oa_location":{"id":"doi:10.1093/database/baae069","is_oa":true,"landing_page_url":"https://doi.org/10.1093/database/baae069","pdf_url":null,"source":{"id":"https://openalex.org/S4210201630","display_name":"Database","issn_l":"1758-0463","issn":["1758-0463"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311647","host_organization_name":"University of Oxford","host_organization_lineage":["https://openalex.org/P4310311647"],"host_organization_lineage_names":["University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Database","raw_type":"journal-article"},"sustainable_development_goals":[{"display_name":"Quality Education","id":"https://metadata.un.org/sdg/4","score":0.6600000262260437}],"awards":[{"id":"https://openalex.org/G3014329568","display_name":null,"funder_award_id":"23-11-00358","funder_id":"https://openalex.org/F4320324099","funder_display_name":"Russian Science Foundation"}],"funders":[{"id":"https://openalex.org/F4320324099","display_name":"Russian Science Foundation","ror":"https://ror.org/03y2gwe85"},{"id":"https://openalex.org/F4320327643","display_name":"Kazan Federal University","ror":"https://ror.org/05256ym39"},{"id":"https://openalex.org/F4320335787","display_name":"Fundamental Research Funds for the Central Universities","ror":null}],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":58,"referenced_works":["https://openalex.org/W90362830","https://openalex.org/W2032566933","https://openalex.org/W2033377040","https://openalex.org/W2052250375","https://openalex.org/W2064030835","https://openalex.org/W2091940856","https://openalex.org/W2094726706","https://openalex.org/W2100428244","https://openalex.org/W2100751507","https://openalex.org/W2101727078","https://openalex.org/W2103017472","https://openalex.org/W2104148262","https://openalex.org/W2122496897","https://openalex.org/W2142678031","https://openalex.org/W2148488766","https://openalex.org/W2335791510","https://openalex.org/W2548932017","https://openalex.org/W2805978167","https://openalex.org/W2911489562","https://openalex.org/W2914171828","https://openalex.org/W2921027260","https://openalex.org/W2946690328","https://openalex.org/W2950595506","https://openalex.org/W2963341956","https://openalex.org/W2970771982","https://openalex.org/W2979250794","https://openalex.org/W3028004046","https://openalex.org/W3034229721","https://openalex.org/W3046375318","https://openalex.org/W3048090444","https://openalex.org/W3106811464","https://openalex.org/W3125468681","https://openalex.org/W3167136668","https://openalex.org/W3214608846","https://openalex.org/W4221142212","https://openalex.org/W4221153690","https://openalex.org/W4244393794","https://openalex.org/W4283318325","https://openalex.org/W4293846201","https://openalex.org/W4362601037","https://openalex.org/W4376274483","https://openalex.org/W4381573137","https://openalex.org/W4381587418","https://openalex.org/W4389105137","https://openalex.org/W4391009404","https://openalex.org/W4393936594","https://openalex.org/W4401500773","https://openalex.org/W6603694148","https://openalex.org/W6682007918","https://openalex.org/W6861002870","https://openalex.org/W6871598338","https://openalex.org/W6892327578","https://openalex.org/W6910987632","https://openalex.org/W6911064679","https://openalex.org/W6911218775","https://openalex.org/W6911226964","https://openalex.org/W6930011644","https://openalex.org/W6930125187"],"related_works":["https://openalex.org/W2381242807","https://openalex.org/W3126131230","https://openalex.org/W2347541121","https://openalex.org/W2165912799","https://openalex.org/W2080951048","https://openalex.org/W4288804799","https://openalex.org/W4379379356","https://openalex.org/W3095980030","https://openalex.org/W4286980122","https://openalex.org/W3198510869"],"abstract_inverted_index":{"The":[0,48,84,162,200,227],"BioRED":[1,49,229],"track":[2,50,230],"at":[3,238],"BioCreative":[4],"VIII":[5],"calls":[6],"for":[7,33,167,173,178,183,205,211,215,219,223],"a":[8,52,153],"community":[9],"effort":[10],"to":[11,44,68,108,136],"identify,":[12],"semantically":[13],"categorize,":[14],"and":[15,59,100,105,117,121,133,144,148,186,221,232,240,242],"highlight":[16],"the":[17,21,82,97,110,118,130,146,168,192,196,206],"novelty":[18,119,184],"factor":[19],"of":[20,55,87,155,191,195],"relationships":[22,78,147],"between":[23,79],"biomedical":[24,35,56,64],"entities":[25],"in":[26,81,91,123],"unstructured":[27],"text.":[28],"Relation":[29],"extraction":[30],"is":[31],"crucial":[32],"many":[34],"natural":[36],"language":[37],"processing":[38],"(NLP)":[39],"applications,":[40],"from":[41,158],"drug":[42],"discovery":[43],"custom":[45],"medical":[46],"solutions.":[47],"simulates":[51],"real-world":[53],"application":[54],"relationship":[57],"extraction,":[58],"as":[60,74,76],"such,":[61],"considers":[62],"multiple":[63],"entity":[65],"types,":[66],"normalized":[67],"their":[69,114,149],"specific":[70],"corresponding":[71],"database":[72],"identifiers,":[73],"well":[75],"defines":[77],"them":[80],"documents.":[83],"challenge":[85,234],"consisted":[86],"two":[88],"subtasks:":[89],"(i)":[90],"Subtask":[92,124,169,207],"1,":[93],"participants":[94,126],"were":[95,106,127,134],"given":[96,128],"article":[98,131],"text":[99],"human":[101],"expert":[102],"annotated":[103],"entities,":[104],"asked":[107,135],"extract":[109],"relation":[111,174,179,198,212,216,225],"pairs,":[112],"identify":[113,143],"semantic":[115],"type":[116,180],"factor,":[120],"(ii)":[122],"2,":[125],"only":[129],"text,":[132],"build":[137],"an":[138],"end-to-end":[139],"system":[140],"that":[141],"could":[142],"categorize":[145],"novelty.":[150],"We":[151],"received":[152],"total":[154],"94":[156],"submissions":[157],"14":[159],"teams":[160],"worldwide.":[161],"highest":[163,201],"F-score":[164,202],"performances":[165,203],"achieved":[166,204],"1":[170],"were:":[171,209],"77.17%":[172],"pair":[175],"identification,":[176,181,185],"58.95%":[177],"59.22%":[182],"44.55%":[187],"when":[188],"evaluating":[189],"all":[190],"above":[193],"aspects":[194],"comprehensive":[197,224],"extraction.":[199,226],"2":[208],"55.84%":[210],"pair,":[213],"43.03%":[214],"type,":[217],"42.74%":[218],"novelty,":[220],"32.75%":[222],"entire":[228],"dataset":[231],"other":[233],"materials":[235],"are":[236],"available":[237],"https://ftp.ncbi.nlm.nih.gov/pub/lu/BC8-BioRED-track/":[239],"https://codalab.lisn.upsaclay.fr/competitions/13377":[241],"https://codalab.lisn.upsaclay.fr/competitions/13378.":[243],"Database":[244],"URL:":[245],"https://ftp.ncbi.nlm.nih.gov/pub/lu/BC8-BioRED-track/https://codalab.lisn.upsaclay.fr/competitions/13377https://codalab.lisn.upsaclay.fr/competitions/13378.":[246]},"counts_by_year":[{"year":2026,"cited_by_count":1},{"year":2025,"cited_by_count":2},{"year":2024,"cited_by_count":5}],"updated_date":"2026-05-21T06:26:12.895304","created_date":"2025-10-10T00:00:00"}
