{"id":"https://openalex.org/W4401237319","doi":"https://doi.org/10.1093/database/baae068","title":"Multi-head CRF classifier for biomedical multi-class named entity recognition on Spanish clinical notes","display_name":"Multi-head CRF classifier for biomedical multi-class named entity recognition on Spanish clinical notes","publication_year":2024,"publication_date":"2024-01-01","ids":{"openalex":"https://openalex.org/W4401237319","doi":"https://doi.org/10.1093/database/baae068","pmid":"https://pubmed.ncbi.nlm.nih.gov/39083461"},"language":"en","primary_location":{"id":"doi:10.1093/database/baae068","is_oa":true,"landing_page_url":"https://doi.org/10.1093/database/baae068","pdf_url":"https://academic.oup.com/database/article-pdf/doi/10.1093/database/baae068/58704869/baae068.pdf","source":{"id":"https://openalex.org/S4210201630","display_name":"Database","issn_l":"1758-0463","issn":["1758-0463"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311647","host_organization_name":"University of Oxford","host_organization_lineage":["https://openalex.org/P4310311647"],"host_organization_lineage_names":["University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Database","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://academic.oup.com/database/article-pdf/doi/10.1093/database/baae068/58704869/baae068.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5052410986","display_name":"Richard Adolph Aires Jonker","orcid":"https://orcid.org/0000-0002-3806-6940"},"institutions":[{"id":"https://openalex.org/I60858718","display_name":"University of Aveiro","ror":"https://ror.org/00nt41z93","country_code":"PT","type":"education","lineage":["https://openalex.org/I60858718"]}],"countries":["PT"],"is_corresponding":true,"raw_author_name":"Richard A A Jonker","raw_affiliation_strings":["IEETA/DETI, LASI, University of Aveiro , Campus Universit\u00e1rio de Santiago, Aveiro 3810-193, Portugal"],"affiliations":[{"raw_affiliation_string":"IEETA/DETI, LASI, University of Aveiro , Campus Universit\u00e1rio de Santiago, Aveiro 3810-193, Portugal","institution_ids":["https://openalex.org/I60858718"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5017535544","display_name":"Tiago Almeida","orcid":"https://orcid.org/0000-0002-4258-3350"},"institutions":[{"id":"https://openalex.org/I60858718","display_name":"University of Aveiro","ror":"https://ror.org/00nt41z93","country_code":"PT","type":"education","lineage":["https://openalex.org/I60858718"]}],"countries":["PT"],"is_corresponding":false,"raw_author_name":"Tiago Almeida","raw_affiliation_strings":["IEETA/DETI, LASI, University of Aveiro , Campus Universit\u00e1rio de Santiago, Aveiro 3810-193, Portugal"],"affiliations":[{"raw_affiliation_string":"IEETA/DETI, LASI, University of Aveiro , Campus Universit\u00e1rio de Santiago, Aveiro 3810-193, Portugal","institution_ids":["https://openalex.org/I60858718"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5053662030","display_name":"Rui Antunes","orcid":"https://orcid.org/0000-0003-3533-8872"},"institutions":[{"id":"https://openalex.org/I60858718","display_name":"University of Aveiro","ror":"https://ror.org/00nt41z93","country_code":"PT","type":"education","lineage":["https://openalex.org/I60858718"]}],"countries":["PT"],"is_corresponding":false,"raw_author_name":"Rui Antunes","raw_affiliation_strings":["IEETA/DETI, LASI, University of Aveiro , Campus Universit\u00e1rio de Santiago, Aveiro 3810-193, Portugal"],"affiliations":[{"raw_affiliation_string":"IEETA/DETI, LASI, University of Aveiro , Campus Universit\u00e1rio de Santiago, Aveiro 3810-193, Portugal","institution_ids":["https://openalex.org/I60858718"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5090944649","display_name":"Jo\u00e3o Rafael Almeida","orcid":"https://orcid.org/0000-0003-0729-2264"},"institutions":[{"id":"https://openalex.org/I60858718","display_name":"University of Aveiro","ror":"https://ror.org/00nt41z93","country_code":"PT","type":"education","lineage":["https://openalex.org/I60858718"]}],"countries":["PT"],"is_corresponding":false,"raw_author_name":"Jo\u00e3o R Almeida","raw_affiliation_strings":["IEETA/DETI, LASI, University of Aveiro , Campus Universit\u00e1rio de Santiago, Aveiro 3810-193, Portugal"],"affiliations":[{"raw_affiliation_string":"IEETA/DETI, LASI, University of Aveiro , Campus Universit\u00e1rio de Santiago, Aveiro 3810-193, Portugal","institution_ids":["https://openalex.org/I60858718"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5073280030","display_name":"S\u00e9rgio Matos","orcid":"https://orcid.org/0000-0003-1941-3983"},"institutions":[{"id":"https://openalex.org/I60858718","display_name":"University of Aveiro","ror":"https://ror.org/00nt41z93","country_code":"PT","type":"education","lineage":["https://openalex.org/I60858718"]}],"countries":["PT"],"is_corresponding":false,"raw_author_name":"S\u00e9rgio Matos","raw_affiliation_strings":["IEETA/DETI, LASI, University of Aveiro , Campus Universit\u00e1rio de Santiago, Aveiro 3810-193, Portugal"],"affiliations":[{"raw_affiliation_string":"IEETA/DETI, LASI, University of Aveiro , Campus Universit\u00e1rio de Santiago, Aveiro 3810-193, Portugal","institution_ids":["https://openalex.org/I60858718"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":5,"corresponding_author_ids":["https://openalex.org/A5052410986"],"corresponding_institution_ids":["https://openalex.org/I60858718"],"apc_list":{"value":1415,"currency":"GBP","value_usd":1735},"apc_paid":{"value":1415,"currency":"GBP","value_usd":1735},"fwci":0.9446,"has_fulltext":true,"cited_by_count":4,"citation_normalized_percentile":{"value":0.74402244,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":96,"max":99},"biblio":{"volume":"2024","issue":null,"first_page":null,"last_page":null},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9995999932289124,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9995999932289124,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10028","display_name":"Topic Modeling","score":0.9993000030517578,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10181","display_name":"Natural Language Processing Techniques","score":0.9940999746322632,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/named-entity-recognition","display_name":"Named-entity recognition","score":0.8719832897186279},{"id":"https://openalex.org/keywords/conditional-random-field","display_name":"Conditional random field","score":0.8086192011833191},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7666879296302795},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.6743206977844238},{"id":"https://openalex.org/keywords/classifier","display_name":"Classifier (UML)","score":0.6319066882133484},{"id":"https://openalex.org/keywords/biomedical-text-mining","display_name":"Biomedical text mining","score":0.5647802948951721},{"id":"https://openalex.org/keywords/information-extraction","display_name":"Information extraction","score":0.5516782402992249},{"id":"https://openalex.org/keywords/natural-language-processing","display_name":"Natural language processing","score":0.5250698924064636},{"id":"https://openalex.org/keywords/snomed-ct","display_name":"SNOMED CT","score":0.5158340334892273},{"id":"https://openalex.org/keywords/class","display_name":"Class (philosophy)","score":0.4805746078491211},{"id":"https://openalex.org/keywords/machine-learning","display_name":"Machine learning","score":0.464620441198349},{"id":"https://openalex.org/keywords/scalability","display_name":"Scalability","score":0.4468315541744232},{"id":"https://openalex.org/keywords/information-retrieval","display_name":"Information retrieval","score":0.44154059886932373},{"id":"https://openalex.org/keywords/relationship-extraction","display_name":"Relationship extraction","score":0.4403233230113983},{"id":"https://openalex.org/keywords/identification","display_name":"Identification (biology)","score":0.4250308871269226},{"id":"https://openalex.org/keywords/data-science","display_name":"Data science","score":0.3606191873550415},{"id":"https://openalex.org/keywords/text-mining","display_name":"Text mining","score":0.2072814702987671},{"id":"https://openalex.org/keywords/task","display_name":"Task (project management)","score":0.12020754814147949},{"id":"https://openalex.org/keywords/terminology","display_name":"Terminology","score":0.09608453512191772},{"id":"https://openalex.org/keywords/database","display_name":"Database","score":0.08969882130622864}],"concepts":[{"id":"https://openalex.org/C2779135771","wikidata":"https://www.wikidata.org/wiki/Q403574","display_name":"Named-entity recognition","level":3,"score":0.8719832897186279},{"id":"https://openalex.org/C152565575","wikidata":"https://www.wikidata.org/wiki/Q1124538","display_name":"Conditional random field","level":2,"score":0.8086192011833191},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7666879296302795},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.6743206977844238},{"id":"https://openalex.org/C95623464","wikidata":"https://www.wikidata.org/wiki/Q1096149","display_name":"Classifier (UML)","level":2,"score":0.6319066882133484},{"id":"https://openalex.org/C165141518","wikidata":"https://www.wikidata.org/wiki/Q4915126","display_name":"Biomedical text mining","level":3,"score":0.5647802948951721},{"id":"https://openalex.org/C195807954","wikidata":"https://www.wikidata.org/wiki/Q1662562","display_name":"Information extraction","level":2,"score":0.5516782402992249},{"id":"https://openalex.org/C204321447","wikidata":"https://www.wikidata.org/wiki/Q30642","display_name":"Natural language processing","level":1,"score":0.5250698924064636},{"id":"https://openalex.org/C206497026","wikidata":"https://www.wikidata.org/wiki/Q1753883","display_name":"SNOMED CT","level":3,"score":0.5158340334892273},{"id":"https://openalex.org/C2777212361","wikidata":"https://www.wikidata.org/wiki/Q5127848","display_name":"Class (philosophy)","level":2,"score":0.4805746078491211},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.464620441198349},{"id":"https://openalex.org/C48044578","wikidata":"https://www.wikidata.org/wiki/Q727490","display_name":"Scalability","level":2,"score":0.4468315541744232},{"id":"https://openalex.org/C23123220","wikidata":"https://www.wikidata.org/wiki/Q816826","display_name":"Information retrieval","level":1,"score":0.44154059886932373},{"id":"https://openalex.org/C153604712","wikidata":"https://www.wikidata.org/wiki/Q7310755","display_name":"Relationship extraction","level":3,"score":0.4403233230113983},{"id":"https://openalex.org/C116834253","wikidata":"https://www.wikidata.org/wiki/Q2039217","display_name":"Identification (biology)","level":2,"score":0.4250308871269226},{"id":"https://openalex.org/C2522767166","wikidata":"https://www.wikidata.org/wiki/Q2374463","display_name":"Data science","level":1,"score":0.3606191873550415},{"id":"https://openalex.org/C71472368","wikidata":"https://www.wikidata.org/wiki/Q676880","display_name":"Text mining","level":2,"score":0.2072814702987671},{"id":"https://openalex.org/C2780451532","wikidata":"https://www.wikidata.org/wiki/Q759676","display_name":"Task (project management)","level":2,"score":0.12020754814147949},{"id":"https://openalex.org/C547195049","wikidata":"https://www.wikidata.org/wiki/Q1725664","display_name":"Terminology","level":2,"score":0.09608453512191772},{"id":"https://openalex.org/C77088390","wikidata":"https://www.wikidata.org/wiki/Q8513","display_name":"Database","level":1,"score":0.08969882130622864},{"id":"https://openalex.org/C138885662","wikidata":"https://www.wikidata.org/wiki/Q5891","display_name":"Philosophy","level":0,"score":0.0},{"id":"https://openalex.org/C59822182","wikidata":"https://www.wikidata.org/wiki/Q441","display_name":"Botany","level":1,"score":0.0},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.0},{"id":"https://openalex.org/C162324750","wikidata":"https://www.wikidata.org/wiki/Q8134","display_name":"Economics","level":0,"score":0.0},{"id":"https://openalex.org/C187736073","wikidata":"https://www.wikidata.org/wiki/Q2920921","display_name":"Management","level":1,"score":0.0},{"id":"https://openalex.org/C41895202","wikidata":"https://www.wikidata.org/wiki/Q8162","display_name":"Linguistics","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D009323","descriptor_name":"Natural Language Processing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D009323","descriptor_name":"Natural Language Processing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D009323","descriptor_name":"Natural Language Processing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D009323","descriptor_name":"Natural Language Processing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D009323","descriptor_name":"Natural Language Processing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D013030","descriptor_name":"Spain","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D013030","descriptor_name":"Spain","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D013030","descriptor_name":"Spain","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D013030","descriptor_name":"Spain","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D013030","descriptor_name":"Spain","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D057225","descriptor_name":"Data Mining","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D057225","descriptor_name":"Data Mining","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D057225","descriptor_name":"Data Mining","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D057225","descriptor_name":"Data Mining","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D057225","descriptor_name":"Data Mining","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D057286","descriptor_name":"Electronic Health Records","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D057286","descriptor_name":"Electronic Health Records","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D057286","descriptor_name":"Electronic Health Records","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D057286","descriptor_name":"Electronic Health Records","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D057286","descriptor_name":"Electronic Health Records","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":3,"locations":[{"id":"doi:10.1093/database/baae068","is_oa":true,"landing_page_url":"https://doi.org/10.1093/database/baae068","pdf_url":"https://academic.oup.com/database/article-pdf/doi/10.1093/database/baae068/58704869/baae068.pdf","source":{"id":"https://openalex.org/S4210201630","display_name":"Database","issn_l":"1758-0463","issn":["1758-0463"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311647","host_organization_name":"University of Oxford","host_organization_lineage":["https://openalex.org/P4310311647"],"host_organization_lineage_names":["University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Database","raw_type":"journal-article"},{"id":"pmid:39083461","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/39083461","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Database : the journal of biological databases and curation","raw_type":null},{"id":"pmh:oai:pubmedcentral.nih.gov:11290360","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/11290360","pdf_url":"https://pmc.ncbi.nlm.nih.gov/articles/PMC11290360/pdf/baae068.pdf","source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Database (Oxford)","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1093/database/baae068","is_oa":true,"landing_page_url":"https://doi.org/10.1093/database/baae068","pdf_url":"https://academic.oup.com/database/article-pdf/doi/10.1093/database/baae068/58704869/baae068.pdf","source":{"id":"https://openalex.org/S4210201630","display_name":"Database","issn_l":"1758-0463","issn":["1758-0463"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311647","host_organization_name":"University of Oxford","host_organization_lineage":["https://openalex.org/P4310311647"],"host_organization_lineage_names":["University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Database","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G3272457656","display_name":null,"funder_award_id":"UIDB/","funder_id":"https://openalex.org/F4320334779","funder_display_name":"Funda\u00e7\u00e3o para a Ci\u00eancia e a Tecnologia"},{"id":"https://openalex.org/G5732873362","display_name":null,"funder_award_id":"UIDB/00127/202","funder_id":"https://openalex.org/F4320334779","funder_display_name":"Funda\u00e7\u00e3o para a Ci\u00eancia e a Tecnologia"},{"id":"https://openalex.org/G5788408143","display_name":null,"funder_award_id":"2020.05784.BD DSAIPA/AI/0088/2020 PRT/BD/154792/2023 UIDB/00127/2020","funder_id":"https://openalex.org/F4320334779","funder_display_name":"Funda\u00e7\u00e3o para a Ci\u00eancia e a Tecnologia"},{"id":"https://openalex.org/G6147775995","display_name":null,"funder_award_id":"UIDB/00127/2020","funder_id":"https://openalex.org/F4320334779","funder_display_name":"Funda\u00e7\u00e3o para a Ci\u00eancia e a Tecnologia"},{"id":"https://openalex.org/G6501558661","display_name":null,"funder_award_id":"DSAIPA/AI/0088/2020","funder_id":"https://openalex.org/F4320334779","funder_display_name":"Funda\u00e7\u00e3o para a Ci\u00eancia e a Tecnologia"},{"id":"https://openalex.org/G7990283390","display_name":null,"funder_award_id":"https","funder_id":"https://openalex.org/F4320334779","funder_display_name":"Funda\u00e7\u00e3o para a Ci\u00eancia e a Tecnologia"},{"id":"https://openalex.org/G943999617","display_name":null,"funder_award_id":"Technology","funder_id":"https://openalex.org/F4320334779","funder_display_name":"Funda\u00e7\u00e3o para a Ci\u00eancia e a Tecnologia"}],"funders":[{"id":"https://openalex.org/F4320334779","display_name":"Funda\u00e7\u00e3o para a Ci\u00eancia e a Tecnologia","ror":"https://ror.org/00snfqn58"}],"has_content":{"grobid_xml":false,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W4401237319.pdf"},"referenced_works_count":106,"referenced_works":["https://openalex.org/W1483357098","https://openalex.org/W1573258796","https://openalex.org/W1935434993","https://openalex.org/W1982982698","https://openalex.org/W2003068264","https://openalex.org/W2004910511","https://openalex.org/W2052250375","https://openalex.org/W2056451646","https://openalex.org/W2061166439","https://openalex.org/W2074640468","https://openalex.org/W2096951189","https://openalex.org/W2109711517","https://openalex.org/W2123512824","https://openalex.org/W2129113459","https://openalex.org/W2143514833","https://openalex.org/W2143902665","https://openalex.org/W2146089916","https://openalex.org/W2146194630","https://openalex.org/W2147880316","https://openalex.org/W2159583324","https://openalex.org/W2165306248","https://openalex.org/W2236252949","https://openalex.org/W2252174377","https://openalex.org/W2296283641","https://openalex.org/W2346452181","https://openalex.org/W2414378847","https://openalex.org/W2515403501","https://openalex.org/W2551333235","https://openalex.org/W2614787793","https://openalex.org/W2734608416","https://openalex.org/W2804221886","https://openalex.org/W2886093254","https://openalex.org/W2891570996","https://openalex.org/W2892252202","https://openalex.org/W2896457183","https://openalex.org/W2915128229","https://openalex.org/W2917968119","https://openalex.org/W2944729956","https://openalex.org/W2963558486","https://openalex.org/W2963571583","https://openalex.org/W2965373594","https://openalex.org/W2983315135","https://openalex.org/W2985294119","https://openalex.org/W2987255980","https://openalex.org/W2995950854","https://openalex.org/W2996762458","https://openalex.org/W3045942044","https://openalex.org/W3046375318","https://openalex.org/W3088349482","https://openalex.org/W3096590546","https://openalex.org/W3102295886","https://openalex.org/W3104015140","https://openalex.org/W3130583616","https://openalex.org/W3131882755","https://openalex.org/W3137481621","https://openalex.org/W3164540570","https://openalex.org/W3168522299","https://openalex.org/W3173333551","https://openalex.org/W3181000356","https://openalex.org/W3186054896","https://openalex.org/W3187060462","https://openalex.org/W3212714602","https://openalex.org/W4221142212","https://openalex.org/W4226265641","https://openalex.org/W4283318325","https://openalex.org/W4292779060","https://openalex.org/W4311903220","https://openalex.org/W4323519786","https://openalex.org/W4376274483","https://openalex.org/W4378470138","https://openalex.org/W4381587418","https://openalex.org/W4387934104","https://openalex.org/W4392019517","https://openalex.org/W4393936594","https://openalex.org/W4401413215","https://openalex.org/W4402697996","https://openalex.org/W6628888145","https://openalex.org/W6645906284","https://openalex.org/W6664548430","https://openalex.org/W6678414869","https://openalex.org/W6681542663","https://openalex.org/W6682082992","https://openalex.org/W6697155078","https://openalex.org/W6729897120","https://openalex.org/W6754394961","https://openalex.org/W6754557853","https://openalex.org/W6755207826","https://openalex.org/W6757764083","https://openalex.org/W6759831810","https://openalex.org/W6763858893","https://openalex.org/W6766673545","https://openalex.org/W6768975873","https://openalex.org/W6769972450","https://openalex.org/W6771759898","https://openalex.org/W6778883912","https://openalex.org/W6784131931","https://openalex.org/W6785292198","https://openalex.org/W6790898924","https://openalex.org/W6797387620","https://openalex.org/W6797939543","https://openalex.org/W6852815936","https://openalex.org/W6853790011","https://openalex.org/W6863659707","https://openalex.org/W6871043535","https://openalex.org/W6911064679","https://openalex.org/W6911304643"],"related_works":["https://openalex.org/W1964783010","https://openalex.org/W2399696375","https://openalex.org/W45206245","https://openalex.org/W189110383","https://openalex.org/W4250494529","https://openalex.org/W2027233318","https://openalex.org/W1834104634","https://openalex.org/W2905273891","https://openalex.org/W2771888422","https://openalex.org/W4379379356"],"abstract_inverted_index":{"The":[0,260],"identification":[1],"of":[2,65,101,146,161,203,214,223,245,258],"medical":[3,49],"concepts":[4],"from":[5],"clinical":[6,34,93,181,225,248],"narratives":[7],"has":[8],"a":[9,77,81,104,113,188,241],"large":[10],"interest":[11],"in":[12,21,33,70,91,107,191],"the":[13,63,144,159,168,199,211],"biomedical":[14,72,175,189,216],"scientific":[15],"community":[16],"due":[17],"to":[18,79,148,186,198,251,262],"its":[19],"importance":[20],"treatment":[22],"improvements":[23],"or":[24],"drug":[25,46],"development":[26],"research.":[27,50],"Biomedical":[28],"named":[29],"entity":[30,99,176,196],"recognition":[31,177],"(NER)":[32],"texts":[35],"is":[36,184,266],"crucial":[37],"for":[38,88,125,180],"automated":[39],"information":[40],"extraction,":[41],"facilitating":[42],"patient":[43],"record":[44],"analysis,":[45],"development,":[47],"and":[48,122,140,156,178,221],"Traditional":[51],"approaches":[52],"often":[53],"focus":[54],"on":[55,174],"single-class":[56,233],"NER":[57,90,109,127,147,234],"tasks,":[58,128],"yet":[59],"recent":[60],"advancements":[61],"emphasize":[62],"necessity":[64],"addressing":[66],"multi-class":[67,89,126,171],"scenarios,":[68],"particularly":[69],"complex":[71],"domains.":[73],"This":[74,117],"paper":[75],"proposes":[76],"strategy":[78,228],"integrate":[80],"multi-head":[82,114],"conditional":[83],"random":[84],"field":[85],"(CRF)":[86],"classifier":[87],"Spanish":[92,170,224],"documents.":[94],"Our":[95],"methodology":[96],"overcomes":[97],"overlapping":[98],"instances":[100],"different":[102],"types,":[103],"common":[105],"challenge":[106],"traditional":[108],"methodologies,":[110],"by":[111],"using":[112],"CRF":[115],"model.":[116],"architecture":[118],"enhances":[119],"computational":[120],"efficiency":[121],"ensures":[123],"scalability":[124],"maintaining":[129],"high":[130],"performance.":[131],"By":[132],"combining":[133],"four":[134],"diverse":[135],"datasets,":[136],"SympTEMIST,":[137],"MedProcNER,":[138],"DisTEMIST,":[139],"PharmaCoNER,":[141],"we":[142],"expand":[143],"scope":[145],"encompass":[149],"five":[150],"classes:":[151],"symptoms,":[152],"procedures,":[153],"diseases,":[154],"chemicals,":[155],"proteins.":[157],"To":[158],"best":[160],"our":[162,227,238,264],"knowledge,":[163],"these":[164],"datasets":[165],"combined":[166,242],"create":[167],"largest":[169],"dataset":[172],"focusing":[173],"linking":[179,197],"notes,":[182],"which":[183],"important":[185],"train":[187],"model":[190],"Spanish.":[192],"We":[193],"also":[194],"provide":[195],"multi-lingual":[200],"Systematized":[201],"Nomenclature":[202],"Medicine":[204],"Clinical":[205],"Terms":[206],"(SNOMED":[207],"CT)":[208],"vocabulary,":[209],"with":[210,247,254],"eventual":[212],"goal":[213],"performing":[215],"relation":[217],"extraction.":[218],"Through":[219],"experimentation":[220],"evaluation":[222],"documents,":[226],"provides":[229],"competitive":[230],"results":[231],"against":[232],"models.":[235],"For":[236],"NER,":[237],"system":[239,265],"achieves":[240],"micro-averaged":[243],"F1-score":[244,257],"78.73,":[246],"mentions":[249],"normalized":[250],"SNOMED":[252],"CT":[253],"an":[255],"end-to-end":[256],"54.51.":[259],"code":[261],"run":[263],"publicly":[267],"available":[268],"at":[269],"https://github.com/ieeta-pt/Multi-Head-CRF.":[270,273],"Database":[271],"URL:":[272]},"counts_by_year":[{"year":2026,"cited_by_count":1},{"year":2025,"cited_by_count":3}],"updated_date":"2026-03-25T14:56:36.534964","created_date":"2025-10-10T00:00:00"}
