{"id":"https://openalex.org/W4393184503","doi":"https://doi.org/10.1093/database/baae022","title":"ESKtides: a comprehensive database and mining method for ESKAPE phage-derived antimicrobial peptides","display_name":"ESKtides: a comprehensive database and mining method for ESKAPE phage-derived antimicrobial peptides","publication_year":2024,"publication_date":"2024-01-01","ids":{"openalex":"https://openalex.org/W4393184503","doi":"https://doi.org/10.1093/database/baae022","pmid":"https://pubmed.ncbi.nlm.nih.gov/38531599"},"language":"en","primary_location":{"id":"doi:10.1093/database/baae022","is_oa":true,"landing_page_url":"https://doi.org/10.1093/database/baae022","pdf_url":"https://academic.oup.com/database/article-pdf/doi/10.1093/database/baae022/57095022/baae022.pdf","source":{"id":"https://openalex.org/S4210201630","display_name":"Database","issn_l":"1758-0463","issn":["1758-0463"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311647","host_organization_name":"University of Oxford","host_organization_lineage":["https://openalex.org/P4310311647"],"host_organization_lineage_names":["University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Database","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://academic.oup.com/database/article-pdf/doi/10.1093/database/baae022/57095022/baae022.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5003941851","display_name":"WU Hong-fang","orcid":"https://orcid.org/0009-0006-9175-0545"},"institutions":[{"id":"https://openalex.org/I204823248","display_name":"Huazhong Agricultural University","ror":"https://ror.org/023b72294","country_code":"CN","type":"education","lineage":["https://openalex.org/I204823248"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Hongfang Wu","raw_affiliation_strings":["College of Biomedicine and Health, Huazhong Agricultural University, Shenzhen Institute of Nutrition and Health, Huazhong Agricultural University National Key Laboratory of Agricultural Microbiology, , Shizishan Street No. 1, Wuhan 430070, China","College of Food Science and Technology, Huazhong Agricultural University Hubei Hongshan Laboratory, , Shizishan Street No. 1, Wuhan 430070, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"College of Biomedicine and Health, Huazhong Agricultural University, Shenzhen Institute of Nutrition and Health, Huazhong Agricultural University National Key Laboratory of Agricultural Microbiology, , Shizishan Street No. 1, Wuhan 430070, China","institution_ids":["https://openalex.org/I204823248"]},{"raw_affiliation_string":"College of Food Science and Technology, Huazhong Agricultural University Hubei Hongshan Laboratory, , Shizishan Street No. 1, Wuhan 430070, China","institution_ids":["https://openalex.org/I204823248"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5054043241","display_name":"Rongxian Chen","orcid":null},"institutions":[{"id":"https://openalex.org/I204823248","display_name":"Huazhong Agricultural University","ror":"https://ror.org/023b72294","country_code":"CN","type":"education","lineage":["https://openalex.org/I204823248"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Rongxian Chen","raw_affiliation_strings":["College of Biomedicine and Health, Huazhong Agricultural University, Shenzhen Institute of Nutrition and Health, Huazhong Agricultural University National Key Laboratory of Agricultural Microbiology, , Shizishan Street No. 1, Wuhan 430070, China","College of Food Science and Technology, Huazhong Agricultural University Hubei Hongshan Laboratory, , Shizishan Street No. 1, Wuhan 430070, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"College of Biomedicine and Health, Huazhong Agricultural University, Shenzhen Institute of Nutrition and Health, Huazhong Agricultural University National Key Laboratory of Agricultural Microbiology, , Shizishan Street No. 1, Wuhan 430070, China","institution_ids":["https://openalex.org/I204823248"]},{"raw_affiliation_string":"College of Food Science and Technology, Huazhong Agricultural University Hubei Hongshan Laboratory, , Shizishan Street No. 1, Wuhan 430070, China","institution_ids":["https://openalex.org/I204823248"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5001296170","display_name":"Xuejian Li","orcid":"https://orcid.org/0009-0001-3043-5297"},"institutions":[{"id":"https://openalex.org/I204823248","display_name":"Huazhong Agricultural University","ror":"https://ror.org/023b72294","country_code":"CN","type":"education","lineage":["https://openalex.org/I204823248"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Xuejian Li","raw_affiliation_strings":["College of Biomedicine and Health, Huazhong Agricultural University, Shenzhen Institute of Nutrition and Health, Huazhong Agricultural University National Key Laboratory of Agricultural Microbiology, , Shizishan Street No. 1, Wuhan 430070, China","College of Food Science and Technology, Huazhong Agricultural University Hubei Hongshan Laboratory, , Shizishan Street No. 1, Wuhan 430070, China","College of Informatics, Huazhong Agricultural University , Shizishan Street No. 1, Wuhan 430070, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"College of Biomedicine and Health, Huazhong Agricultural University, Shenzhen Institute of Nutrition and Health, Huazhong Agricultural University National Key Laboratory of Agricultural Microbiology, , Shizishan Street No. 1, Wuhan 430070, China","institution_ids":["https://openalex.org/I204823248"]},{"raw_affiliation_string":"College of Food Science and Technology, Huazhong Agricultural University Hubei Hongshan Laboratory, , Shizishan Street No. 1, Wuhan 430070, China","institution_ids":["https://openalex.org/I204823248"]},{"raw_affiliation_string":"College of Informatics, Huazhong Agricultural University , Shizishan Street No. 1, Wuhan 430070, China","institution_ids":["https://openalex.org/I204823248"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5054795296","display_name":"Yue Zhang","orcid":"https://orcid.org/0000-0003-3568-0395"},"institutions":[{"id":"https://openalex.org/I204823248","display_name":"Huazhong Agricultural University","ror":"https://ror.org/023b72294","country_code":"CN","type":"education","lineage":["https://openalex.org/I204823248"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Yue Zhang","raw_affiliation_strings":["College of Biomedicine and Health, Huazhong Agricultural University, Shenzhen Institute of Nutrition and Health, Huazhong Agricultural University National Key Laboratory of Agricultural Microbiology, , Shizishan Street No. 1, Wuhan 430070, China","College of Food Science and Technology, Huazhong Agricultural University Hubei Hongshan Laboratory, , Shizishan Street No. 1, Wuhan 430070, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"College of Biomedicine and Health, Huazhong Agricultural University, Shenzhen Institute of Nutrition and Health, Huazhong Agricultural University National Key Laboratory of Agricultural Microbiology, , Shizishan Street No. 1, Wuhan 430070, China","institution_ids":["https://openalex.org/I204823248"]},{"raw_affiliation_string":"College of Food Science and Technology, Huazhong Agricultural University Hubei Hongshan Laboratory, , Shizishan Street No. 1, Wuhan 430070, China","institution_ids":["https://openalex.org/I204823248"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100326955","display_name":"Jianwei Zhang","orcid":"https://orcid.org/0000-0001-8030-5346"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Jianwei Zhang","raw_affiliation_strings":["National Key Laboratory of Crop Genetic Improvement , Shizishan Street No. 1, Wuhan 430070, China"],"raw_orcid":"https://orcid.org/0000-0001-8030-5346","affiliations":[{"raw_affiliation_string":"National Key Laboratory of Crop Genetic Improvement , Shizishan Street No. 1, Wuhan 430070, China","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5103201823","display_name":"Yanbo Yang","orcid":"https://orcid.org/0000-0003-1532-9274"},"institutions":[{"id":"https://openalex.org/I204823248","display_name":"Huazhong Agricultural University","ror":"https://ror.org/023b72294","country_code":"CN","type":"education","lineage":["https://openalex.org/I204823248"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Yanbo Yang","raw_affiliation_strings":["College of Informatics, Huazhong Agricultural University , Shizishan Street No. 1, Wuhan 430070, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"College of Informatics, Huazhong Agricultural University , Shizishan Street No. 1, Wuhan 430070, China","institution_ids":["https://openalex.org/I204823248"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5101655824","display_name":"Jun Wan","orcid":"https://orcid.org/0000-0002-8273-8839"},"institutions":[{"id":"https://openalex.org/I204823248","display_name":"Huazhong Agricultural University","ror":"https://ror.org/023b72294","country_code":"CN","type":"education","lineage":["https://openalex.org/I204823248"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Jun Wan","raw_affiliation_strings":["College of Food Science and Technology, Huazhong Agricultural University Hubei Hongshan Laboratory, , Shizishan Street No. 1, Wuhan 430070, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"College of Food Science and Technology, Huazhong Agricultural University Hubei Hongshan Laboratory, , Shizishan Street No. 1, Wuhan 430070, China","institution_ids":["https://openalex.org/I204823248"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100773734","display_name":"Yang Zhou","orcid":"https://orcid.org/0000-0001-8939-1877"},"institutions":[{"id":"https://openalex.org/I204823248","display_name":"Huazhong Agricultural University","ror":"https://ror.org/023b72294","country_code":"CN","type":"education","lineage":["https://openalex.org/I204823248"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Yang Zhou","raw_affiliation_strings":["College of Fisheries, Huazhong Agricultural University , Shizishan Street No. 1, Wuhan 430070, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"College of Fisheries, Huazhong Agricultural University , Shizishan Street No. 1, Wuhan 430070, China","institution_ids":["https://openalex.org/I204823248"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5074707535","display_name":"Huanchun Chen","orcid":"https://orcid.org/0000-0003-0680-5953"},"institutions":[{"id":"https://openalex.org/I204823248","display_name":"Huazhong Agricultural University","ror":"https://ror.org/023b72294","country_code":"CN","type":"education","lineage":["https://openalex.org/I204823248"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Huanchun Chen","raw_affiliation_strings":["College of Biomedicine and Health, Huazhong Agricultural University, Shenzhen Institute of Nutrition and Health, Huazhong Agricultural University National Key Laboratory of Agricultural Microbiology, , Shizishan Street No. 1, Wuhan 430070, China","College of Veterinary Medicine, Huazhong Agricultural University , Shizishan Street No. 1, Wuhan 430070, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"College of Biomedicine and Health, Huazhong Agricultural University, Shenzhen Institute of Nutrition and Health, Huazhong Agricultural University National Key Laboratory of Agricultural Microbiology, , Shizishan Street No. 1, Wuhan 430070, China","institution_ids":["https://openalex.org/I204823248"]},{"raw_affiliation_string":"College of Veterinary Medicine, Huazhong Agricultural University , Shizishan Street No. 1, Wuhan 430070, China","institution_ids":["https://openalex.org/I204823248"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100650441","display_name":"Jinquan Li","orcid":"https://orcid.org/0000-0001-8971-7582"},"institutions":[{"id":"https://openalex.org/I204823248","display_name":"Huazhong Agricultural University","ror":"https://ror.org/023b72294","country_code":"CN","type":"education","lineage":["https://openalex.org/I204823248"]},{"id":"https://openalex.org/I4210088191","display_name":"Agricultural Genomics Institute at Shenzhen","ror":"https://ror.org/0066zpp98","country_code":"CN","type":"facility","lineage":["https://openalex.org/I4210088191","https://openalex.org/I4210127390","https://openalex.org/I4210138501","https://openalex.org/I4210151987"]},{"id":"https://openalex.org/I4210138501","display_name":"Chinese Academy of Agricultural Sciences","ror":"https://ror.org/0313jb750","country_code":"CN","type":"government","lineage":["https://openalex.org/I4210127390","https://openalex.org/I4210138501","https://openalex.org/I4210151987"]},{"id":"https://openalex.org/I4210151987","display_name":"Ministry of Agriculture and Rural Affairs","ror":"https://ror.org/05ckt8b96","country_code":"CN","type":"government","lineage":["https://openalex.org/I4210127390","https://openalex.org/I4210151987"]},{"id":"https://openalex.org/I4210158998","display_name":"Shenzhen Academy of Metrology and Quality Inspection","ror":"https://ror.org/04zv3rp09","country_code":"CN","type":"other","lineage":["https://openalex.org/I4210158998"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Jinquan Li","raw_affiliation_strings":["College of Biomedicine and Health, Huazhong Agricultural University, Shenzhen Institute of Nutrition and Health, Huazhong Agricultural University National Key Laboratory of Agricultural Microbiology, , Shizishan Street No. 1, Wuhan 430070, China","College of Food Science and Technology, Huazhong Agricultural University Hubei Hongshan Laboratory, , Shizishan Street No. 1, Wuhan 430070, China","College of Veterinary Medicine, Huazhong Agricultural University , Shizishan Street No. 1, Wuhan 430070, China","Shenzhen Branch, Guangdong Laboratory for Lingnan Modern Agriculture, Genome Analysis Laboratory of the Ministry of Agriculture and Rural Affairs, Agricultural Genomics Institute at Shenzhen, Chinese Academy of Agricultural Sciences , Buxin Road No. 97, Shenzhen 518000, China","Shenzhen Institute of Quality & Safety Inspection and Research , Buxin Road No. 97, Shenzhen 518000, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"College of Biomedicine and Health, Huazhong Agricultural University, Shenzhen Institute of Nutrition and Health, Huazhong Agricultural University National Key Laboratory of Agricultural Microbiology, , Shizishan Street No. 1, Wuhan 430070, China","institution_ids":["https://openalex.org/I204823248"]},{"raw_affiliation_string":"College of Food Science and Technology, Huazhong Agricultural University Hubei Hongshan Laboratory, , Shizishan Street No. 1, Wuhan 430070, China","institution_ids":["https://openalex.org/I204823248"]},{"raw_affiliation_string":"College of Veterinary Medicine, Huazhong Agricultural University , Shizishan Street No. 1, Wuhan 430070, China","institution_ids":["https://openalex.org/I204823248"]},{"raw_affiliation_string":"Shenzhen Branch, Guangdong Laboratory for Lingnan Modern Agriculture, Genome Analysis Laboratory of the Ministry of Agriculture and Rural Affairs, Agricultural Genomics Institute at Shenzhen, Chinese Academy of Agricultural Sciences , Buxin Road No. 97, Shenzhen 518000, China","institution_ids":["https://openalex.org/I4210088191","https://openalex.org/I4210138501","https://openalex.org/I4210151987"]},{"raw_affiliation_string":"Shenzhen Institute of Quality & Safety Inspection and Research , Buxin Road No. 97, Shenzhen 518000, China","institution_ids":["https://openalex.org/I4210158998"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100721408","display_name":"Runze Li","orcid":"https://orcid.org/0000-0002-0154-2202"},"institutions":[{"id":"https://openalex.org/I204823248","display_name":"Huazhong Agricultural University","ror":"https://ror.org/023b72294","country_code":"CN","type":"education","lineage":["https://openalex.org/I204823248"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Runze Li","raw_affiliation_strings":["College of Biomedicine and Health, Huazhong Agricultural University, Shenzhen Institute of Nutrition and Health, Huazhong Agricultural University National Key Laboratory of Agricultural Microbiology, , Shizishan Street No. 1, Wuhan 430070, China","College of Food Science and Technology, Huazhong Agricultural University Hubei Hongshan Laboratory, , Shizishan Street No. 1, Wuhan 430070, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"College of Biomedicine and Health, Huazhong Agricultural University, Shenzhen Institute of Nutrition and Health, Huazhong Agricultural University National Key Laboratory of Agricultural Microbiology, , Shizishan Street No. 1, Wuhan 430070, China","institution_ids":["https://openalex.org/I204823248"]},{"raw_affiliation_string":"College of Food Science and Technology, Huazhong Agricultural University Hubei Hongshan Laboratory, , Shizishan Street No. 1, Wuhan 430070, China","institution_ids":["https://openalex.org/I204823248"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5086008569","display_name":"Geng Zou","orcid":"https://orcid.org/0000-0002-8360-6707"},"institutions":[{"id":"https://openalex.org/I204823248","display_name":"Huazhong Agricultural University","ror":"https://ror.org/023b72294","country_code":"CN","type":"education","lineage":["https://openalex.org/I204823248"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Geng Zou","raw_affiliation_strings":["College of Biomedicine and Health, Huazhong Agricultural University, Shenzhen Institute of Nutrition and Health, Huazhong Agricultural University National Key Laboratory of Agricultural Microbiology, , Shizishan Street No. 1, Wuhan 430070, China","College of Food Science and Technology, Huazhong Agricultural University Hubei Hongshan Laboratory, , Shizishan Street No. 1, Wuhan 430070, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"College of Biomedicine and Health, Huazhong Agricultural University, Shenzhen Institute of Nutrition and Health, Huazhong Agricultural University National Key Laboratory of Agricultural Microbiology, , Shizishan Street No. 1, Wuhan 430070, China","institution_ids":["https://openalex.org/I204823248"]},{"raw_affiliation_string":"College of Food Science and Technology, Huazhong Agricultural University Hubei Hongshan Laboratory, , Shizishan Street No. 1, Wuhan 430070, China","institution_ids":["https://openalex.org/I204823248"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":5,"corresponding_author_ids":["https://openalex.org/A5086008569","https://openalex.org/A5100721408"],"corresponding_institution_ids":["https://openalex.org/I204823248"],"apc_list":{"value":1415,"currency":"GBP","value_usd":1735},"apc_paid":{"value":1415,"currency":"GBP","value_usd":1735},"fwci":5.1529,"has_fulltext":false,"cited_by_count":14,"citation_normalized_percentile":{"value":0.95274903,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":90,"max":99},"biblio":{"volume":"2024","issue":null,"first_page":null,"last_page":null},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11048","display_name":"Bacteriophages and microbial interactions","score":0.9993000030517578,"subfield":{"id":"https://openalex.org/subfields/2303","display_name":"Ecology"},"field":{"id":"https://openalex.org/fields/23","display_name":"Environmental Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T11048","display_name":"Bacteriophages and microbial interactions","score":0.9993000030517578,"subfield":{"id":"https://openalex.org/subfields/2303","display_name":"Ecology"},"field":{"id":"https://openalex.org/fields/23","display_name":"Environmental Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T11103","display_name":"Antimicrobial Peptides and Activities","score":0.9983999729156494,"subfield":{"id":"https://openalex.org/subfields/2404","display_name":"Microbiology"},"field":{"id":"https://openalex.org/fields/24","display_name":"Immunology and Microbiology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10141","display_name":"Probiotics and Fermented Foods","score":0.9965000152587891,"subfield":{"id":"https://openalex.org/subfields/1106","display_name":"Food Science"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/enterococcus-faecium","display_name":"Enterococcus faecium","score":0.7201417088508606},{"id":"https://openalex.org/keywords/acinetobacter-baumannii","display_name":"Acinetobacter baumannii","score":0.715987503528595},{"id":"https://openalex.org/keywords/database","display_name":"Database","score":0.5480998158454895},{"id":"https://openalex.org/keywords/antimicrobial","display_name":"Antimicrobial","score":0.5323420166969299},{"id":"https://openalex.org/keywords/enterobacter","display_name":"Enterobacter","score":0.4812700152397156},{"id":"https://openalex.org/keywords/microbiology","display_name":"Microbiology","score":0.4784548282623291},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.4445461630821228},{"id":"https://openalex.org/keywords/staphylococcus-aureus","display_name":"Staphylococcus aureus","score":0.42726439237594604},{"id":"https://openalex.org/keywords/genome","display_name":"Genome","score":0.4265364408493042},{"id":"https://openalex.org/keywords/pseudomonas-aeruginosa","display_name":"Pseudomonas aeruginosa","score":0.4207035005092621},{"id":"https://openalex.org/keywords/bacteria","display_name":"Bacteria","score":0.3621457815170288},{"id":"https://openalex.org/keywords/antibiotics","display_name":"Antibiotics","score":0.2158084511756897},{"id":"https://openalex.org/keywords/escherichia-coli","display_name":"Escherichia coli","score":0.2069757878780365},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.15372338891029358},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.11884957551956177},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.10374727845191956}],"concepts":[{"id":"https://openalex.org/C2777677444","wikidata":"https://www.wikidata.org/wiki/Q140010","display_name":"Enterococcus faecium","level":3,"score":0.7201417088508606},{"id":"https://openalex.org/C2776315533","wikidata":"https://www.wikidata.org/wiki/Q3241189","display_name":"Acinetobacter baumannii","level":4,"score":0.715987503528595},{"id":"https://openalex.org/C77088390","wikidata":"https://www.wikidata.org/wiki/Q8513","display_name":"Database","level":1,"score":0.5480998158454895},{"id":"https://openalex.org/C4937899","wikidata":"https://www.wikidata.org/wiki/Q68541106","display_name":"Antimicrobial","level":2,"score":0.5323420166969299},{"id":"https://openalex.org/C2778983983","wikidata":"https://www.wikidata.org/wiki/Q134281","display_name":"Enterobacter","level":4,"score":0.4812700152397156},{"id":"https://openalex.org/C89423630","wikidata":"https://www.wikidata.org/wiki/Q7193","display_name":"Microbiology","level":1,"score":0.4784548282623291},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.4445461630821228},{"id":"https://openalex.org/C2779489039","wikidata":"https://www.wikidata.org/wiki/Q188121","display_name":"Staphylococcus aureus","level":3,"score":0.42726439237594604},{"id":"https://openalex.org/C141231307","wikidata":"https://www.wikidata.org/wiki/Q7020","display_name":"Genome","level":3,"score":0.4265364408493042},{"id":"https://openalex.org/C2777637488","wikidata":"https://www.wikidata.org/wiki/Q31856","display_name":"Pseudomonas aeruginosa","level":3,"score":0.4207035005092621},{"id":"https://openalex.org/C523546767","wikidata":"https://www.wikidata.org/wiki/Q10876","display_name":"Bacteria","level":2,"score":0.3621457815170288},{"id":"https://openalex.org/C501593827","wikidata":"https://www.wikidata.org/wiki/Q12187","display_name":"Antibiotics","level":2,"score":0.2158084511756897},{"id":"https://openalex.org/C547475151","wikidata":"https://www.wikidata.org/wiki/Q25419","display_name":"Escherichia coli","level":3,"score":0.2069757878780365},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.15372338891029358},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.11884957551956177},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.10374727845191956}],"mesh":[{"descriptor_ui":"D000089882","descriptor_name":"Antimicrobial Peptides","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000089882","descriptor_name":"Antimicrobial Peptides","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000089882","descriptor_name":"Antimicrobial Peptides","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000089882","descriptor_name":"Antimicrobial Peptides","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000089882","descriptor_name":"Antimicrobial Peptides","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000089882","descriptor_name":"Antimicrobial Peptides","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000900","descriptor_name":"Anti-Bacterial Agents","qualifier_ui":"Q000627","qualifier_name":"therapeutic use","is_major_topic":false},{"descriptor_ui":"D000900","descriptor_name":"Anti-Bacterial Agents","qualifier_ui":"Q000627","qualifier_name":"therapeutic use","is_major_topic":false},{"descriptor_ui":"D000900","descriptor_name":"Anti-Bacterial Agents","qualifier_ui":"Q000627","qualifier_name":"therapeutic use","is_major_topic":false},{"descriptor_ui":"D000900","descriptor_name":"Anti-Bacterial Agents","qualifier_ui":"Q000627","qualifier_name":"therapeutic use","is_major_topic":false},{"descriptor_ui":"D000900","descriptor_name":"Anti-Bacterial Agents","qualifier_ui":"Q000627","qualifier_name":"therapeutic use","is_major_topic":false},{"descriptor_ui":"D000900","descriptor_name":"Anti-Bacterial Agents","qualifier_ui":"Q000627","qualifier_name":"therapeutic use","is_major_topic":false},{"descriptor_ui":"D001419","descriptor_name":"Bacteria","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001419","descriptor_name":"Bacteria","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001419","descriptor_name":"Bacteria","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001419","descriptor_name":"Bacteria","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001419","descriptor_name":"Bacteria","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001419","descriptor_name":"Bacteria","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001435","descriptor_name":"Bacteriophages","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D001435","descriptor_name":"Bacteriophages","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D001435","descriptor_name":"Bacteriophages","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D001435","descriptor_name":"Bacteriophages","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D001435","descriptor_name":"Bacteriophages","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D001435","descriptor_name":"Bacteriophages","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D007711","descriptor_name":"Klebsiella pneumoniae","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D007711","descriptor_name":"Klebsiella pneumoniae","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D007711","descriptor_name":"Klebsiella pneumoniae","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D007711","descriptor_name":"Klebsiella pneumoniae","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D007711","descriptor_name":"Klebsiella pneumoniae","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D007711","descriptor_name":"Klebsiella pneumoniae","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":3,"locations":[{"id":"doi:10.1093/database/baae022","is_oa":true,"landing_page_url":"https://doi.org/10.1093/database/baae022","pdf_url":"https://academic.oup.com/database/article-pdf/doi/10.1093/database/baae022/57095022/baae022.pdf","source":{"id":"https://openalex.org/S4210201630","display_name":"Database","issn_l":"1758-0463","issn":["1758-0463"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311647","host_organization_name":"University of Oxford","host_organization_lineage":["https://openalex.org/P4310311647"],"host_organization_lineage_names":["University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Database","raw_type":"journal-article"},{"id":"pmid:38531599","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/38531599","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Database : the journal of biological databases and curation","raw_type":null},{"id":"pmh:oai:pubmedcentral.nih.gov:10965241","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/10965241","pdf_url":"https://pmc.ncbi.nlm.nih.gov/articles/PMC10965241/pdf/baae022.pdf","source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Database (Oxford)","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1093/database/baae022","is_oa":true,"landing_page_url":"https://doi.org/10.1093/database/baae022","pdf_url":"https://academic.oup.com/database/article-pdf/doi/10.1093/database/baae022/57095022/baae022.pdf","source":{"id":"https://openalex.org/S4210201630","display_name":"Database","issn_l":"1758-0463","issn":["1758-0463"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311647","host_organization_name":"University of Oxford","host_organization_lineage":["https://openalex.org/P4310311647"],"host_organization_lineage_names":["University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Database","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G167441628","display_name":null,"funder_award_id":"2022CFB659","funder_id":"https://openalex.org/F4320322186","funder_display_name":"Natural Science Foundation of Hubei Province"},{"id":"https://openalex.org/G1963675940","display_name":null,"funder_award_id":"32072323","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G4612617155","display_name":null,"funder_award_id":"31772083","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G580295946","display_name":null,"funder_award_id":"32072323, 32073022, 31772083","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G7478765006","display_name":null,"funder_award_id":"32073022","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"}],"funders":[{"id":"https://openalex.org/F4320321001","display_name":"National Natural Science Foundation of China","ror":"https://ror.org/01h0zpd94"},{"id":"https://openalex.org/F4320322186","display_name":"Natural Science Foundation of Hubei Province","ror":null}],"has_content":{"pdf":true,"grobid_xml":false},"content_urls":{"pdf":"https://content.openalex.org/works/W4393184503.pdf"},"referenced_works_count":44,"referenced_works":["https://openalex.org/W1992128867","https://openalex.org/W2008962556","https://openalex.org/W2034583138","https://openalex.org/W2035755292","https://openalex.org/W2042160423","https://openalex.org/W2096093282","https://openalex.org/W2112364185","https://openalex.org/W2129115651","https://openalex.org/W2130124027","https://openalex.org/W2131474431","https://openalex.org/W2143485490","https://openalex.org/W2153843103","https://openalex.org/W2156125289","https://openalex.org/W2163316049","https://openalex.org/W2175270296","https://openalex.org/W2291003811","https://openalex.org/W2338867097","https://openalex.org/W2594385802","https://openalex.org/W2769959144","https://openalex.org/W2888057220","https://openalex.org/W2918063357","https://openalex.org/W2923128159","https://openalex.org/W2941437619","https://openalex.org/W2952714942","https://openalex.org/W2965128681","https://openalex.org/W2975867000","https://openalex.org/W3025501158","https://openalex.org/W3097405028","https://openalex.org/W3118048495","https://openalex.org/W3188372451","https://openalex.org/W3198303770","https://openalex.org/W3207421551","https://openalex.org/W4206677002","https://openalex.org/W4214943162","https://openalex.org/W4220798888","https://openalex.org/W4223551334","https://openalex.org/W4226250938","https://openalex.org/W4308834846","https://openalex.org/W4309608558","https://openalex.org/W4315784590","https://openalex.org/W4323566192","https://openalex.org/W6800693912","https://openalex.org/W6809296486","https://openalex.org/W7043590196"],"related_works":["https://openalex.org/W3093841189","https://openalex.org/W1515648715","https://openalex.org/W171006953","https://openalex.org/W4283820061","https://openalex.org/W3121339453","https://openalex.org/W3135119623","https://openalex.org/W3205126883","https://openalex.org/W4375834216","https://openalex.org/W3024655620","https://openalex.org/W4385241926"],"abstract_inverted_index":{"'Superbugs'":[0],"have":[1],"received":[2],"increasing":[3],"attention":[4],"from":[5,101,135],"researchers,":[6],"such":[7],"as":[8,45],"ESKAPE":[9,79,175],"bacteria":[10],"(Enterococcus":[11],"faecium,":[12],"Staphylococcus":[13],"aureus,":[14],"Klebsiella":[15],"pneumoniae,":[16],"Acinetobacter":[17],"baumannii,":[18],"Pseudomonas":[19],"aeruginosa":[20],"and":[21,81,148,154,165,177],"Enterobacter":[22],"spp.),":[23],"which":[24,102,138,167],"directly":[25],"led":[26],"to":[27,128],"about":[28],"1":[29],"270":[30],"000":[31],"death":[32],"cases":[33],"in":[34,84],"2019.":[35],"Recently,":[36],"phage":[37,68,131],"peptidoglycan":[38],"hydrolases":[39],"(PGHs)-derived":[40],"antimicrobial":[41,62,133],"peptides":[42,63,103,115,134],"were":[43,98,104,120],"proposed":[44],"new":[46],"antibacterial":[47,118],"agents":[48],"against":[49],"multidrug-resistant":[50],"bacteria.":[51],"However,":[52],"there":[53],"is":[54],"still":[55],"a":[56,73,89,107,109,152,169],"lack":[57],"of":[58,75,78,93,111,143],"methods":[59],"for":[60,161],"mining":[61],"based":[64,87,173],"on":[65,88,174],"phages":[66,83],"or":[67],"PGHs.":[69],"Here,":[70],"by":[71],"using":[72],"collection":[74],"6809":[76],"genomes":[77],"isolates":[80],"corresponding":[82],"public":[85],"databases,":[86],"unified":[90],"annotation":[91],"process":[92],"all":[94],"the":[95,130,141],"genomes,":[96,137],"PGHs":[97],"systematically":[99],"identified,":[100],"mined.":[105],"As":[106],"result,":[108],"total":[110],"12":[112],"067":[113],"248":[114],"with":[116],"high":[117],"activities":[119],"respectively":[121],"determined.":[122],"A":[123],"user-friendly":[124,153],"tool":[125],"was":[126,159],"developed":[127],"predict":[129],"PGHs-derived":[132],"customized":[136],"also":[139],"allows":[140],"calculation":[142],"peptide":[144,171],"phylogeny,":[145],"physicochemical":[146],"properties,":[147],"secondary":[149],"structure.":[150],"Finally,":[151],"intuitive":[155],"database,":[156],"ESKtides":[157],"(http://www.phageonehealth.cn:9000/ESKtides),":[158],"designed":[160],"data":[162],"browsing,":[163],"searching":[164],"downloading,":[166],"provides":[168],"rich":[170],"library":[172],"prophages":[176],"phages.":[178],"Database":[179],"URL:":[180],"10.1093/database/baae022.":[181]},"counts_by_year":[{"year":2026,"cited_by_count":3},{"year":2025,"cited_by_count":10},{"year":2024,"cited_by_count":1}],"updated_date":"2026-05-21T06:26:12.895304","created_date":"2025-10-10T00:00:00"}
