{"id":"https://openalex.org/W4399484747","doi":"https://doi.org/10.1093/database/baae014","title":"The Immunopeptidomics Ontology (ImPO)","display_name":"The Immunopeptidomics Ontology (ImPO)","publication_year":2024,"publication_date":"2024-01-01","ids":{"openalex":"https://openalex.org/W4399484747","doi":"https://doi.org/10.1093/database/baae014","pmid":"https://pubmed.ncbi.nlm.nih.gov/38857186"},"language":"en","primary_location":{"id":"doi:10.1093/database/baae014","is_oa":true,"landing_page_url":"https://doi.org/10.1093/database/baae014","pdf_url":null,"source":{"id":"https://openalex.org/S4210201630","display_name":"Database","issn_l":"1758-0463","issn":["1758-0463"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311647","host_organization_name":"University of Oxford","host_organization_lineage":["https://openalex.org/P4310311647"],"host_organization_lineage_names":["University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Database","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://doi.org/10.1093/database/baae014","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5072979086","display_name":"Daniel Faria","orcid":"https://orcid.org/0000-0003-1511-277X"},"institutions":[{"id":"https://openalex.org/I121345201","display_name":"Instituto de Engenharia de Sistemas e Computadores Investiga\u00e7\u00e3o e Desenvolvimento","ror":"https://ror.org/04mqy3p58","country_code":"PT","type":"nonprofit","lineage":["https://openalex.org/I121345201","https://openalex.org/I4210125590"]},{"id":"https://openalex.org/I141596103","display_name":"University of Lisbon","ror":"https://ror.org/01c27hj86","country_code":"PT","type":"education","lineage":["https://openalex.org/I141596103"]}],"countries":["PT"],"is_corresponding":true,"raw_author_name":"Daniel Faria","raw_affiliation_strings":["INESC-ID, Instituto Superior T\u00e9cnico, Universidade de Lisboa , Rua Alves Redol, 9, Lisboa 1000-029, Portugal"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"INESC-ID, Instituto Superior T\u00e9cnico, Universidade de Lisboa , Rua Alves Redol, 9, Lisboa 1000-029, Portugal","institution_ids":["https://openalex.org/I121345201","https://openalex.org/I141596103"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5003133625","display_name":"Patr\u00edcia Eug\u00e9nio","orcid":"https://orcid.org/0000-0002-2329-3753"},"institutions":[{"id":"https://openalex.org/I141596103","display_name":"University of Lisbon","ror":"https://ror.org/01c27hj86","country_code":"PT","type":"education","lineage":["https://openalex.org/I141596103"]}],"countries":["PT"],"is_corresponding":false,"raw_author_name":"Patr\u00edcia Eug\u00e9nio","raw_affiliation_strings":["LASIGE, Faculdade de Ci\u00eancias da Universidade de Lisboa , Campo Grande, Lisboa 1749-016, Portugal"],"raw_orcid":"https://orcid.org/0000-0002-2329-3753","affiliations":[{"raw_affiliation_string":"LASIGE, Faculdade de Ci\u00eancias da Universidade de Lisboa , Campo Grande, Lisboa 1749-016, Portugal","institution_ids":["https://openalex.org/I141596103"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5029895588","display_name":"Marta Contreiras Silva","orcid":"https://orcid.org/0000-0003-1864-0105"},"institutions":[{"id":"https://openalex.org/I141596103","display_name":"University of Lisbon","ror":"https://ror.org/01c27hj86","country_code":"PT","type":"education","lineage":["https://openalex.org/I141596103"]}],"countries":["PT"],"is_corresponding":false,"raw_author_name":"Marta Contreiras Silva","raw_affiliation_strings":["LASIGE, Faculdade de Ci\u00eancias da Universidade de Lisboa , Campo Grande, Lisboa 1749-016, Portugal"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"LASIGE, Faculdade de Ci\u00eancias da Universidade de Lisboa , Campo Grande, Lisboa 1749-016, Portugal","institution_ids":["https://openalex.org/I141596103"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5014010817","display_name":"Laura Balbi","orcid":"https://orcid.org/0000-0002-1116-3476"},"institutions":[{"id":"https://openalex.org/I141596103","display_name":"University of Lisbon","ror":"https://ror.org/01c27hj86","country_code":"PT","type":"education","lineage":["https://openalex.org/I141596103"]}],"countries":["PT"],"is_corresponding":false,"raw_author_name":"Laura Balbi","raw_affiliation_strings":["LASIGE, Faculdade de Ci\u00eancias da Universidade de Lisboa , Campo Grande, Lisboa 1749-016, Portugal"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"LASIGE, Faculdade de Ci\u00eancias da Universidade de Lisboa , Campo Grande, Lisboa 1749-016, Portugal","institution_ids":["https://openalex.org/I141596103"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5024941468","display_name":"Georges Bedran","orcid":"https://orcid.org/0000-0002-3086-3742"},"institutions":[{"id":"https://openalex.org/I40413290","display_name":"University of Gda\u0144sk","ror":"https://ror.org/011dv8m48","country_code":"PL","type":"education","lineage":["https://openalex.org/I40413290"]}],"countries":["PL"],"is_corresponding":false,"raw_author_name":"Georges Bedran","raw_affiliation_strings":["International Centre for Cancer Vaccine Science, University of Gdansk , ul. K\u0142adki 24, Gda\u0144sk 80-822, Poland"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"International Centre for Cancer Vaccine Science, University of Gdansk , ul. K\u0142adki 24, Gda\u0144sk 80-822, Poland","institution_ids":["https://openalex.org/I40413290"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5085727233","display_name":"Ashwin Adrian Kallor","orcid":"https://orcid.org/0000-0001-8140-0716"},"institutions":[{"id":"https://openalex.org/I40413290","display_name":"University of Gda\u0144sk","ror":"https://ror.org/011dv8m48","country_code":"PL","type":"education","lineage":["https://openalex.org/I40413290"]}],"countries":["PL"],"is_corresponding":false,"raw_author_name":"Ashwin Adrian Kallor","raw_affiliation_strings":["International Centre for Cancer Vaccine Science, University of Gdansk , ul. K\u0142adki 24, Gda\u0144sk 80-822, Poland"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"International Centre for Cancer Vaccine Science, University of Gdansk , ul. K\u0142adki 24, Gda\u0144sk 80-822, Poland","institution_ids":["https://openalex.org/I40413290"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5084053237","display_name":"Susana Nunes","orcid":null},"institutions":[{"id":"https://openalex.org/I141596103","display_name":"University of Lisbon","ror":"https://ror.org/01c27hj86","country_code":"PT","type":"education","lineage":["https://openalex.org/I141596103"]}],"countries":["PT"],"is_corresponding":false,"raw_author_name":"Susana Nunes","raw_affiliation_strings":["LASIGE, Faculdade de Ci\u00eancias da Universidade de Lisboa , Campo Grande, Lisboa 1749-016, Portugal"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"LASIGE, Faculdade de Ci\u00eancias da Universidade de Lisboa , Campo Grande, Lisboa 1749-016, Portugal","institution_ids":["https://openalex.org/I141596103"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5028989941","display_name":"Aleksander Pa\u0142kowski","orcid":"https://orcid.org/0000-0002-3140-8469"},"institutions":[{"id":"https://openalex.org/I40413290","display_name":"University of Gda\u0144sk","ror":"https://ror.org/011dv8m48","country_code":"PL","type":"education","lineage":["https://openalex.org/I40413290"]}],"countries":["PL"],"is_corresponding":false,"raw_author_name":"Aleksander Palkowski","raw_affiliation_strings":["International Centre for Cancer Vaccine Science, University of Gdansk , ul. K\u0142adki 24, Gda\u0144sk 80-822, Poland"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"International Centre for Cancer Vaccine Science, University of Gdansk , ul. K\u0142adki 24, Gda\u0144sk 80-822, Poland","institution_ids":["https://openalex.org/I40413290"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5102870495","display_name":"Micha\u0142 Waleron","orcid":"https://orcid.org/0000-0002-7925-5246"},"institutions":[{"id":"https://openalex.org/I40413290","display_name":"University of Gda\u0144sk","ror":"https://ror.org/011dv8m48","country_code":"PL","type":"education","lineage":["https://openalex.org/I40413290"]}],"countries":["PL"],"is_corresponding":false,"raw_author_name":"Michal Waleron","raw_affiliation_strings":["International Centre for Cancer Vaccine Science, University of Gdansk , ul. K\u0142adki 24, Gda\u0144sk 80-822, Poland"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"International Centre for Cancer Vaccine Science, University of Gdansk , ul. K\u0142adki 24, Gda\u0144sk 80-822, Poland","institution_ids":["https://openalex.org/I40413290"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5012272783","display_name":"Javier A. Alfaro","orcid":"https://orcid.org/0000-0002-5553-6991"},"institutions":[{"id":"https://openalex.org/I212119943","display_name":"University of Victoria","ror":"https://ror.org/04s5mat29","country_code":"CA","type":"education","lineage":["https://openalex.org/I212119943"]},{"id":"https://openalex.org/I3130638677","display_name":"Edinburgh College","ror":"https://ror.org/04vpa6h32","country_code":"GB","type":"education","lineage":["https://openalex.org/I3130638677"]},{"id":"https://openalex.org/I40413290","display_name":"University of Gda\u0144sk","ror":"https://ror.org/011dv8m48","country_code":"PL","type":"education","lineage":["https://openalex.org/I40413290"]},{"id":"https://openalex.org/I98677209","display_name":"University of Edinburgh","ror":"https://ror.org/01nrxwf90","country_code":"GB","type":"education","lineage":["https://openalex.org/I98677209"]}],"countries":["CA","GB","PL"],"is_corresponding":false,"raw_author_name":"Javier A Alfaro","raw_affiliation_strings":["Department of Biochemistry and Microbiology, University of Victoria , 3800 Finnerty Rd, Victoria, British Columbia, BC V8P 5C2, Canada","Institute for Adaptive and Neural Computation, School of Informatics, University of Edinburgh , Old College, South Bridge, Edinburgh, EH8 9YL, UK","International Centre for Cancer Vaccine Science, University of Gdansk , ul. K\u0142adki 24, Gda\u0144sk 80-822, Poland","The Canadian Association for Responsible AI in Medicine, Victoria , Canada"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Biochemistry and Microbiology, University of Victoria , 3800 Finnerty Rd, Victoria, British Columbia, BC V8P 5C2, Canada","institution_ids":["https://openalex.org/I212119943"]},{"raw_affiliation_string":"Institute for Adaptive and Neural Computation, School of Informatics, University of Edinburgh , Old College, South Bridge, Edinburgh, EH8 9YL, UK","institution_ids":["https://openalex.org/I3130638677","https://openalex.org/I98677209"]},{"raw_affiliation_string":"International Centre for Cancer Vaccine Science, University of Gdansk , ul. K\u0142adki 24, Gda\u0144sk 80-822, Poland","institution_ids":["https://openalex.org/I40413290"]},{"raw_affiliation_string":"The Canadian Association for Responsible AI in Medicine, Victoria , Canada","institution_ids":[]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5034898355","display_name":"C\u00e1tia Pesquita","orcid":"https://orcid.org/0000-0002-1847-9393"},"institutions":[{"id":"https://openalex.org/I141596103","display_name":"University of Lisbon","ror":"https://ror.org/01c27hj86","country_code":"PT","type":"education","lineage":["https://openalex.org/I141596103"]}],"countries":["PT"],"is_corresponding":false,"raw_author_name":"Catia Pesquita","raw_affiliation_strings":["LASIGE, Faculdade de Ci\u00eancias da Universidade de Lisboa , Campo Grande, Lisboa 1749-016, Portugal"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"LASIGE, Faculdade de Ci\u00eancias da Universidade de Lisboa , Campo Grande, Lisboa 1749-016, Portugal","institution_ids":["https://openalex.org/I141596103"]}]}],"institutions":[],"countries_distinct_count":4,"institutions_distinct_count":11,"corresponding_author_ids":["https://openalex.org/A5072979086"],"corresponding_institution_ids":["https://openalex.org/I121345201","https://openalex.org/I141596103"],"apc_list":{"value":1415,"currency":"GBP","value_usd":1735},"apc_paid":{"value":1415,"currency":"GBP","value_usd":1735},"fwci":1.0895,"has_fulltext":false,"cited_by_count":5,"citation_normalized_percentile":{"value":0.76148002,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":90,"max":98},"biblio":{"volume":"2024","issue":null,"first_page":null,"last_page":null},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T12576","display_name":"vaccines and immunoinformatics approaches","score":0.9957000017166138,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T12576","display_name":"vaccines and immunoinformatics approaches","score":0.9957000017166138,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11016","display_name":"Monoclonal and Polyclonal Antibodies Research","score":0.9824000000953674,"subfield":{"id":"https://openalex.org/subfields/2741","display_name":"Radiology, Nuclear Medicine and Imaging"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T10519","display_name":"Advanced Proteomics Techniques and Applications","score":0.9804999828338623,"subfield":{"id":"https://openalex.org/subfields/1607","display_name":"Spectroscopy"},"field":{"id":"https://openalex.org/fields/16","display_name":"Chemistry"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6564642786979675},{"id":"https://openalex.org/keywords/ontology","display_name":"Ontology","score":0.6150853633880615},{"id":"https://openalex.org/keywords/information-retrieval","display_name":"Information retrieval","score":0.4996352195739746},{"id":"https://openalex.org/keywords/world-wide-web","display_name":"World Wide Web","score":0.4508705139160156},{"id":"https://openalex.org/keywords/software-engineering","display_name":"Software engineering","score":0.3437897562980652},{"id":"https://openalex.org/keywords/philosophy","display_name":"Philosophy","score":0.0771636962890625},{"id":"https://openalex.org/keywords/epistemology","display_name":"Epistemology","score":0.06058111786842346}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6564642786979675},{"id":"https://openalex.org/C25810664","wikidata":"https://www.wikidata.org/wiki/Q44325","display_name":"Ontology","level":2,"score":0.6150853633880615},{"id":"https://openalex.org/C23123220","wikidata":"https://www.wikidata.org/wiki/Q816826","display_name":"Information retrieval","level":1,"score":0.4996352195739746},{"id":"https://openalex.org/C136764020","wikidata":"https://www.wikidata.org/wiki/Q466","display_name":"World Wide Web","level":1,"score":0.4508705139160156},{"id":"https://openalex.org/C115903868","wikidata":"https://www.wikidata.org/wiki/Q80993","display_name":"Software engineering","level":1,"score":0.3437897562980652},{"id":"https://openalex.org/C138885662","wikidata":"https://www.wikidata.org/wiki/Q5891","display_name":"Philosophy","level":0,"score":0.0771636962890625},{"id":"https://openalex.org/C111472728","wikidata":"https://www.wikidata.org/wiki/Q9471","display_name":"Epistemology","level":1,"score":0.06058111786842346}],"mesh":[{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D010455","descriptor_name":"Peptides","qualifier_ui":"Q000276","qualifier_name":"immunology","is_major_topic":false},{"descriptor_ui":"D010455","descriptor_name":"Peptides","qualifier_ui":"Q000276","qualifier_name":"immunology","is_major_topic":false},{"descriptor_ui":"D010455","descriptor_name":"Peptides","qualifier_ui":"Q000276","qualifier_name":"immunology","is_major_topic":false},{"descriptor_ui":"D010455","descriptor_name":"Peptides","qualifier_ui":"Q000276","qualifier_name":"immunology","is_major_topic":false},{"descriptor_ui":"D010455","descriptor_name":"Peptides","qualifier_ui":"Q000276","qualifier_name":"immunology","is_major_topic":false},{"descriptor_ui":"D030562","descriptor_name":"Databases, Protein","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D030562","descriptor_name":"Databases, Protein","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D030562","descriptor_name":"Databases, Protein","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D030562","descriptor_name":"Databases, Protein","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D030562","descriptor_name":"Databases, Protein","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D040901","descriptor_name":"Proteomics","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D040901","descriptor_name":"Proteomics","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D040901","descriptor_name":"Proteomics","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D040901","descriptor_name":"Proteomics","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D040901","descriptor_name":"Proteomics","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D064229","descriptor_name":"Biological Ontologies","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D064229","descriptor_name":"Biological Ontologies","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D064229","descriptor_name":"Biological Ontologies","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D064229","descriptor_name":"Biological Ontologies","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D064229","descriptor_name":"Biological Ontologies","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true}],"locations_count":3,"locations":[{"id":"doi:10.1093/database/baae014","is_oa":true,"landing_page_url":"https://doi.org/10.1093/database/baae014","pdf_url":null,"source":{"id":"https://openalex.org/S4210201630","display_name":"Database","issn_l":"1758-0463","issn":["1758-0463"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311647","host_organization_name":"University of Oxford","host_organization_lineage":["https://openalex.org/P4310311647"],"host_organization_lineage_names":["University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Database","raw_type":"journal-article"},{"id":"pmid:38857186","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/38857186","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Database : the journal of biological databases and curation","raw_type":null},{"id":"pmh:oai:pubmedcentral.nih.gov:11164101","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/11164101","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Database (Oxford)","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1093/database/baae014","is_oa":true,"landing_page_url":"https://doi.org/10.1093/database/baae014","pdf_url":null,"source":{"id":"https://openalex.org/S4210201630","display_name":"Database","issn_l":"1758-0463","issn":["1758-0463"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311647","host_organization_name":"University of Oxford","host_organization_lineage":["https://openalex.org/P4310311647"],"host_organization_lineage_names":["University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Database","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G4541994910","display_name":null,"funder_award_id":"UIDB/00408/2020 UIDP/00408/2020","funder_id":"https://openalex.org/F4320334779","funder_display_name":"Funda\u00e7\u00e3o para a Ci\u00eancia e a Tecnologia"}],"funders":[{"id":"https://openalex.org/F4320321042","display_name":"Fundacja na rzecz Nauki Polskiej","ror":"https://ror.org/048zd9m77"},{"id":"https://openalex.org/F4320334779","display_name":"Funda\u00e7\u00e3o para a Ci\u00eancia e a Tecnologia","ror":"https://ror.org/00snfqn58"}],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":110,"referenced_works":["https://openalex.org/W102861580","https://openalex.org/W116899217","https://openalex.org/W194637477","https://openalex.org/W1642891250","https://openalex.org/W1757909678","https://openalex.org/W1964979998","https://openalex.org/W1965465660","https://openalex.org/W1974896839","https://openalex.org/W1989277387","https://openalex.org/W1994127362","https://openalex.org/W2007026865","https://openalex.org/W2009256542","https://openalex.org/W2021074129","https://openalex.org/W2049302531","https://openalex.org/W2057947771","https://openalex.org/W2061231608","https://openalex.org/W2062584010","https://openalex.org/W2069827080","https://openalex.org/W2079018735","https://openalex.org/W2082830752","https://openalex.org/W2084596426","https://openalex.org/W2087779040","https://openalex.org/W2097453652","https://openalex.org/W2103017472","https://openalex.org/W2105836514","https://openalex.org/W2123171788","https://openalex.org/W2124957697","https://openalex.org/W2125904022","https://openalex.org/W2128116945","https://openalex.org/W2129451985","https://openalex.org/W2134232070","https://openalex.org/W2137079713","https://openalex.org/W2141201603","https://openalex.org/W2142237411","https://openalex.org/W2147018385","https://openalex.org/W2148014577","https://openalex.org/W2150617113","https://openalex.org/W2154139219","https://openalex.org/W2155249637","https://openalex.org/W2163107468","https://openalex.org/W2237812244","https://openalex.org/W2261812172","https://openalex.org/W2265431061","https://openalex.org/W2295890767","https://openalex.org/W2336088163","https://openalex.org/W2338265029","https://openalex.org/W2399721281","https://openalex.org/W2530065999","https://openalex.org/W2552513321","https://openalex.org/W2572147858","https://openalex.org/W2589139221","https://openalex.org/W2590491911","https://openalex.org/W2620878783","https://openalex.org/W2746128059","https://openalex.org/W2762043089","https://openalex.org/W2783038509","https://openalex.org/W2791587029","https://openalex.org/W2792688048","https://openalex.org/W2803674859","https://openalex.org/W2883904729","https://openalex.org/W2898789672","https://openalex.org/W2904210127","https://openalex.org/W2913165368","https://openalex.org/W2952200877","https://openalex.org/W2962304951","https://openalex.org/W2965518110","https://openalex.org/W2990490132","https://openalex.org/W2995389725","https://openalex.org/W2999279459","https://openalex.org/W3003192283","https://openalex.org/W3011662685","https://openalex.org/W3033399098","https://openalex.org/W3044820918","https://openalex.org/W3106811464","https://openalex.org/W3137993385","https://openalex.org/W3164656968","https://openalex.org/W3179008103","https://openalex.org/W3198114458","https://openalex.org/W3204075152","https://openalex.org/W3204175201","https://openalex.org/W3204786151","https://openalex.org/W3206714073","https://openalex.org/W3208691473","https://openalex.org/W3214608846","https://openalex.org/W4200135473","https://openalex.org/W4205885810","https://openalex.org/W4214531044","https://openalex.org/W4223568044","https://openalex.org/W4226062297","https://openalex.org/W4231254854","https://openalex.org/W4233120011","https://openalex.org/W4241410814","https://openalex.org/W4243513495","https://openalex.org/W4307475884","https://openalex.org/W4309506674","https://openalex.org/W6604167652","https://openalex.org/W6604787608","https://openalex.org/W6607902833","https://openalex.org/W6668418044","https://openalex.org/W6680144998","https://openalex.org/W6697348754","https://openalex.org/W6703007967","https://openalex.org/W6712789265","https://openalex.org/W6731801563","https://openalex.org/W6749188970","https://openalex.org/W6753240718","https://openalex.org/W6791702927","https://openalex.org/W6802291749","https://openalex.org/W6813094581","https://openalex.org/W6846312834"],"related_works":["https://openalex.org/W4391375266","https://openalex.org/W2899084033","https://openalex.org/W2748952813","https://openalex.org/W2390279801","https://openalex.org/W4391913857","https://openalex.org/W2358668433","https://openalex.org/W4396701345","https://openalex.org/W2376932109","https://openalex.org/W2001405890","https://openalex.org/W4396696052"],"abstract_inverted_index":{"The":[0],"adaptive":[1],"immune":[2],"response":[3],"plays":[4],"a":[5,103,220,277,282],"vital":[6],"role":[7,279],"in":[8,97,130,167,280,299],"eliminating":[9],"infected":[10],"and":[11,59,91,116,143,165,174,182,205,207,222,243,248,251,260,284],"aberrant":[12],"cells":[13],"from":[14],"the":[15,21,34,38,47,54,88,107,111,120,125,139,151,154,158,163,168,193,236,254,257,264,288,300],"body.":[16],"This":[17],"process":[18],"hinges":[19],"on":[20,33,43],"presentation":[22,60,115],"of":[23,40,50,94,128,153,266,287],"short":[24],"peptides":[25,41],"by":[26,119,178],"major":[27],"histocompatibility":[28],"complex":[29],"Class":[30],"I":[31],"molecules":[32],"cell":[35],"surface.":[36],"Immunopeptidomics,":[37],"study":[39],"displayed":[42],"cells,":[44],"delves":[45],"into":[46],"wide":[48],"variety":[49],"these":[51],"peptides.":[52],"Understanding":[53],"mechanisms":[55],"behind":[56],"antigen":[57,114],"processing":[58],"is":[61,76,102],"crucial":[62],"for":[63],"effectively":[64],"evaluating":[65],"cancer":[66],"immunotherapies.":[67],"As":[68,263],"an":[69,78],"emerging":[70,292],"domain,":[71],"immunopeptidomics":[72,98,129,179,270],"currently":[73],"lacks":[74],"standardization-there":[75],"neither":[77],"established":[79],"terminology":[80,164],"nor":[81],"formally":[82],"defined":[83],"semantics-a":[84],"critical":[85],"concern":[86],"considering":[87],"complexity,":[89],"heterogeneity,":[90],"growing":[92],"volume":[93],"data":[95,176,224,241,290],"involved":[96],"studies.":[99],"Additionally,":[100],"there":[101],"disconnection":[104],"between":[105,141,256],"how":[106],"proteomics":[108,259],"community":[109],"delivers":[110],"information":[112],"about":[113],"its":[117],"uptake":[118],"clinical":[121,144,258],"genomics":[122,261],"community.":[123],"Considering":[124],"significant":[126],"relevance":[127],"cancer,":[131],"this":[132,147],"shortcoming":[133],"must":[134],"be":[135,228],"addressed":[136],"to":[137,172,188,218,231,275,297],"bridge":[138],"gap":[140,255],"research":[142],"practice.":[145],"In":[146],"work,":[148],"we":[149,272],"detail":[150],"development":[152],"ImmunoPeptidomics":[155],"Ontology,":[156,200],"ImPO,":[157],"first":[159],"effort":[160],"at":[161],"standardizing":[162],"semantics":[166],"domain.":[169,237],"ImPO":[170,185,212,239,274],"aims":[171],"encapsulate":[173],"systematize":[175],"generated":[177],"experimental":[180],"processes":[181],"bioinformatics":[183],"analysis.":[184],"establishes":[186],"cross-references":[187],"24":[189],"relevant":[190],"ontologies,":[191],"including":[192],"National":[194],"Cancer":[195],"Institute":[196],"Thesaurus,":[197],"Mondo":[198],"Disease":[199],"Logical":[201],"Observation":[202],"Identifier":[203],"Names":[204],"Codes":[206],"Experimental":[208],"Factor":[209],"Ontology.":[210],"Although":[211],"was":[213],"developed":[214],"using":[215],"expert":[216],"knowledge":[217,249],"characterize":[219],"large":[221],"representative":[223],"collection,":[225],"it":[226],"may":[227],"readily":[229],"used":[230],"encode":[232],"other":[233],"datasets":[234],"within":[235],"Ultimately,":[238],"facilitates":[240],"integration":[242],"analysis,":[244],"enabling":[245],"querying,":[246],"inference":[247],"generation":[250],"importantly":[252],"bridging":[253],"communities.":[262],"field":[265],"immunogenomics":[267],"uses":[268],"protein-level":[269],"data,":[271],"expect":[273],"play":[276],"key":[278],"supporting":[281],"rich":[283],"standardized":[285],"description":[286],"large-scale":[289],"that":[291],"high-throughput":[293],"technologies":[294],"are":[295],"expected":[296],"bring":[298],"near":[301],"future.":[302],"Ontology":[303],"URL:":[304],"https://zenodo.org/record/10237571":[305],"Project":[306],"GitHub:":[307],"https://github.com/liseda-lab/ImPO/blob/main/ImPO.owl.":[308]},"counts_by_year":[{"year":2026,"cited_by_count":1},{"year":2025,"cited_by_count":3},{"year":2024,"cited_by_count":1}],"updated_date":"2026-05-07T13:39:58.223016","created_date":"2025-10-10T00:00:00"}
