{"id":"https://openalex.org/W4388500594","doi":"https://doi.org/10.1093/database/baad077","title":"OncoCTMiner: streamlining precision oncology trial matching via molecular profile analysis","display_name":"OncoCTMiner: streamlining precision oncology trial matching via molecular profile analysis","publication_year":2023,"publication_date":"2023-01-01","ids":{"openalex":"https://openalex.org/W4388500594","doi":"https://doi.org/10.1093/database/baad077","pmid":"https://pubmed.ncbi.nlm.nih.gov/37935585"},"language":"en","primary_location":{"id":"doi:10.1093/database/baad077","is_oa":true,"landing_page_url":"https://doi.org/10.1093/database/baad077","pdf_url":"https://academic.oup.com/database/article-pdf/doi/10.1093/database/baad077/52838167/baad077.pdf","source":{"id":"https://openalex.org/S4210201630","display_name":"Database","issn_l":"1758-0463","issn":["1758-0463"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311647","host_organization_name":"University of Oxford","host_organization_lineage":["https://openalex.org/P4310311647"],"host_organization_lineage_names":["University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Database","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://academic.oup.com/database/article-pdf/doi/10.1093/database/baad077/52838167/baad077.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5113993139","display_name":"Quan Xu","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Quan Xu","raw_affiliation_strings":["Department of Bioinformatics, Beijing ChosenMed Clinical Laboratory Co. Ltd. , Jinghai Industrial Park, 156 Jinghai 4th Road, Economic and Technological Development Area, Beijing 100176, China","Research and Development Center, ChosenMed Technology (Zhejiang) Co. Ltd. , Room 101, Building 8, Jincheng International Science and Technology City, No. 26 Zhenxing East Road, Linping District, Hangzhou, 311103, China"],"affiliations":[{"raw_affiliation_string":"Department of Bioinformatics, Beijing ChosenMed Clinical Laboratory Co. Ltd. , Jinghai Industrial Park, 156 Jinghai 4th Road, Economic and Technological Development Area, Beijing 100176, China","institution_ids":[]},{"raw_affiliation_string":"Research and Development Center, ChosenMed Technology (Zhejiang) Co. Ltd. , Room 101, Building 8, Jincheng International Science and Technology City, No. 26 Zhenxing East Road, Linping District, Hangzhou, 311103, China","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100672815","display_name":"Yueyue Liu","orcid":"https://orcid.org/0000-0002-6983-7875"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Yueyue Liu","raw_affiliation_strings":["Department of Bioinformatics, Beijing ChosenMed Clinical Laboratory Co. Ltd. , Jinghai Industrial Park, 156 Jinghai 4th Road, Economic and Technological Development Area, Beijing 100176, China"],"affiliations":[{"raw_affiliation_string":"Department of Bioinformatics, Beijing ChosenMed Clinical Laboratory Co. Ltd. , Jinghai Industrial Park, 156 Jinghai 4th Road, Economic and Technological Development Area, Beijing 100176, China","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100700463","display_name":"Dawei Sun","orcid":"https://orcid.org/0000-0002-6631-8527"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Dawei Sun","raw_affiliation_strings":["Department of Bioinformatics, Beijing ChosenMed Clinical Laboratory Co. Ltd. , Jinghai Industrial Park, 156 Jinghai 4th Road, Economic and Technological Development Area, Beijing 100176, China","Research and Development Center, ChosenMed Technology (Zhejiang) Co. Ltd. , Room 101, Building 8, Jincheng International Science and Technology City, No. 26 Zhenxing East Road, Linping District, Hangzhou, 311103, China"],"affiliations":[{"raw_affiliation_string":"Department of Bioinformatics, Beijing ChosenMed Clinical Laboratory Co. Ltd. , Jinghai Industrial Park, 156 Jinghai 4th Road, Economic and Technological Development Area, Beijing 100176, China","institution_ids":[]},{"raw_affiliation_string":"Research and Development Center, ChosenMed Technology (Zhejiang) Co. Ltd. , Room 101, Building 8, Jincheng International Science and Technology City, No. 26 Zhenxing East Road, Linping District, Hangzhou, 311103, China","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5006679093","display_name":"Xiaoqian Huang","orcid":"https://orcid.org/0000-0002-2782-9068"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Xiaoqian Huang","raw_affiliation_strings":["Department of Bioinformatics, Beijing ChosenMed Clinical Laboratory Co. Ltd. , Jinghai Industrial Park, 156 Jinghai 4th Road, Economic and Technological Development Area, Beijing 100176, China"],"affiliations":[{"raw_affiliation_string":"Department of Bioinformatics, Beijing ChosenMed Clinical Laboratory Co. Ltd. , Jinghai Industrial Park, 156 Jinghai 4th Road, Economic and Technological Development Area, Beijing 100176, China","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5111071342","display_name":"Feihong Li","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Feihong Li","raw_affiliation_strings":["Department of Bioinformatics, Beijing ChosenMed Clinical Laboratory Co. Ltd. , Jinghai Industrial Park, 156 Jinghai 4th Road, Economic and Technological Development Area, Beijing 100176, China"],"affiliations":[{"raw_affiliation_string":"Department of Bioinformatics, Beijing ChosenMed Clinical Laboratory Co. Ltd. , Jinghai Industrial Park, 156 Jinghai 4th Road, Economic and Technological Development Area, Beijing 100176, China","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5048434000","display_name":"JinCheng Zhai","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"JinCheng Zhai","raw_affiliation_strings":["Department of Bioinformatics, Beijing ChosenMed Clinical Laboratory Co. Ltd. , Jinghai Industrial Park, 156 Jinghai 4th Road, Economic and Technological Development Area, Beijing 100176, China"],"affiliations":[{"raw_affiliation_string":"Department of Bioinformatics, Beijing ChosenMed Clinical Laboratory Co. Ltd. , Jinghai Industrial Park, 156 Jinghai 4th Road, Economic and Technological Development Area, Beijing 100176, China","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100319864","display_name":"Li Yang","orcid":"https://orcid.org/0000-0002-8611-6359"},"institutions":[{"id":"https://openalex.org/I20231570","display_name":"Peking University","ror":"https://ror.org/02v51f717","country_code":"CN","type":"education","lineage":["https://openalex.org/I20231570"]},{"id":"https://openalex.org/I4210096250","display_name":"Beijing Institute of Big Data Research","ror":"https://ror.org/00s1sz824","country_code":"CN","type":"facility","lineage":["https://openalex.org/I20231570","https://openalex.org/I37796252","https://openalex.org/I4210096250"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Yang Li","raw_affiliation_strings":["Beijing International Center for Mathematical Research, Peking University , No. 5 Yiheyuan Road Haidian District, Beijing 100871, China","Chongqing Research Institute of Big Data, Peking University , Chongqing 401333, China"],"affiliations":[{"raw_affiliation_string":"Beijing International Center for Mathematical Research, Peking University , No. 5 Yiheyuan Road Haidian District, Beijing 100871, China","institution_ids":["https://openalex.org/I20231570"]},{"raw_affiliation_string":"Chongqing Research Institute of Big Data, Peking University , Chongqing 401333, China","institution_ids":["https://openalex.org/I4210096250","https://openalex.org/I20231570"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5101980979","display_name":"Qiming Zhou","orcid":"https://orcid.org/0000-0002-2892-6329"},"institutions":[],"countries":[],"is_corresponding":true,"raw_author_name":"Qiming Zhou","raw_affiliation_strings":["Department of Bioinformatics, Beijing ChosenMed Clinical Laboratory Co. Ltd. , Jinghai Industrial Park, 156 Jinghai 4th Road, Economic and Technological Development Area, Beijing 100176, China","Research and Development Center, ChosenMed Technology (Zhejiang) Co. Ltd. , Room 101, Building 8, Jincheng International Science and Technology City, No. 26 Zhenxing East Road, Linping District, Hangzhou, 311103, China"],"affiliations":[{"raw_affiliation_string":"Department of Bioinformatics, Beijing ChosenMed Clinical Laboratory Co. Ltd. , Jinghai Industrial Park, 156 Jinghai 4th Road, Economic and Technological Development Area, Beijing 100176, China","institution_ids":[]},{"raw_affiliation_string":"Research and Development Center, ChosenMed Technology (Zhejiang) Co. Ltd. , Room 101, Building 8, Jincheng International Science and Technology City, No. 26 Zhenxing East Road, Linping District, Hangzhou, 311103, China","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5006912481","display_name":"Niansong Qian","orcid":"https://orcid.org/0000-0002-3297-4294"},"institutions":[{"id":"https://openalex.org/I2802939634","display_name":"Chinese PLA General Hospital","ror":"https://ror.org/04gw3ra78","country_code":"CN","type":"healthcare","lineage":["https://openalex.org/I2802939634"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Niansong Qian","raw_affiliation_strings":["Department of Oncology, Senior Department of Respiratory and Critical Care Medicine, The Eighth Medical Center of Chinese PLA General Hospital , No.17 A Heishanhu Road, Haidian District, Beijing 100853, China"],"affiliations":[{"raw_affiliation_string":"Department of Oncology, Senior Department of Respiratory and Critical Care Medicine, The Eighth Medical Center of Chinese PLA General Hospital , No.17 A Heishanhu Road, Haidian District, Beijing 100853, China","institution_ids":["https://openalex.org/I2802939634"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5008702128","display_name":"Beifang Niu","orcid":"https://orcid.org/0000-0002-7448-7793"},"institutions":[{"id":"https://openalex.org/I19820366","display_name":"Chinese Academy of Sciences","ror":"https://ror.org/034t30j35","country_code":"CN","type":"government","lineage":["https://openalex.org/I19820366"]},{"id":"https://openalex.org/I4210108629","display_name":"Computer Network Information Center","ror":"https://ror.org/01s0wyf50","country_code":"CN","type":"facility","lineage":["https://openalex.org/I19820366","https://openalex.org/I4210108629"]},{"id":"https://openalex.org/I4210165038","display_name":"University of Chinese Academy of Sciences","ror":"https://ror.org/05qbk4x57","country_code":"CN","type":"education","lineage":["https://openalex.org/I19820366","https://openalex.org/I4210165038"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Beifang Niu","raw_affiliation_strings":["Computer Network Information Center, Chinese Academy of Sciences , Beijing 100190, China","University of Chinese Academy of Sciences , Beijing 100190, China"],"affiliations":[{"raw_affiliation_string":"Computer Network Information Center, Chinese Academy of Sciences , Beijing 100190, China","institution_ids":["https://openalex.org/I4210108629","https://openalex.org/I19820366"]},{"raw_affiliation_string":"University of Chinese Academy of Sciences , Beijing 100190, China","institution_ids":["https://openalex.org/I4210165038"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":10,"corresponding_author_ids":["https://openalex.org/A5006912481","https://openalex.org/A5101980979"],"corresponding_institution_ids":["https://openalex.org/I2802939634"],"apc_list":{"value":1415,"currency":"GBP","value_usd":1735},"apc_paid":{"value":1415,"currency":"GBP","value_usd":1735},"fwci":0.9455,"has_fulltext":true,"cited_by_count":4,"citation_normalized_percentile":{"value":0.7919742,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":94,"max":96},"biblio":{"volume":"2023","issue":null,"first_page":null,"last_page":null},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11287","display_name":"Cancer Genomics and Diagnostics","score":0.9993000030517578,"subfield":{"id":"https://openalex.org/subfields/1306","display_name":"Cancer Research"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11287","display_name":"Cancer Genomics and Diagnostics","score":0.9993000030517578,"subfield":{"id":"https://openalex.org/subfields/1306","display_name":"Cancer Research"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11642","display_name":"Genomics and Rare Diseases","score":0.9959999918937683,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11970","display_name":"Molecular Biology Techniques and Applications","score":0.9840999841690063,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/precision-oncology","display_name":"Precision oncology","score":0.751224935054779},{"id":"https://openalex.org/keywords/matching","display_name":"Matching (statistics)","score":0.6740802526473999},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.5074118971824646},{"id":"https://openalex.org/keywords/precision-medicine","display_name":"Precision medicine","score":0.4344038963317871},{"id":"https://openalex.org/keywords/medical-physics","display_name":"Medical physics","score":0.4333837330341339},{"id":"https://openalex.org/keywords/oncology","display_name":"Oncology","score":0.42592981457710266},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.3762076497077942},{"id":"https://openalex.org/keywords/information-retrieval","display_name":"Information retrieval","score":0.37172043323516846},{"id":"https://openalex.org/keywords/internal-medicine","display_name":"Internal medicine","score":0.3412831425666809},{"id":"https://openalex.org/keywords/medicine","display_name":"Medicine","score":0.32648760080337524},{"id":"https://openalex.org/keywords/cancer","display_name":"Cancer","score":0.25534093379974365},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.13743972778320312},{"id":"https://openalex.org/keywords/pathology","display_name":"Pathology","score":0.12794017791748047}],"concepts":[{"id":"https://openalex.org/C3020497934","wikidata":"https://www.wikidata.org/wiki/Q17075943","display_name":"Precision oncology","level":3,"score":0.751224935054779},{"id":"https://openalex.org/C165064840","wikidata":"https://www.wikidata.org/wiki/Q1321061","display_name":"Matching (statistics)","level":2,"score":0.6740802526473999},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.5074118971824646},{"id":"https://openalex.org/C163763905","wikidata":"https://www.wikidata.org/wiki/Q17075943","display_name":"Precision medicine","level":2,"score":0.4344038963317871},{"id":"https://openalex.org/C19527891","wikidata":"https://www.wikidata.org/wiki/Q1120908","display_name":"Medical physics","level":1,"score":0.4333837330341339},{"id":"https://openalex.org/C143998085","wikidata":"https://www.wikidata.org/wiki/Q162555","display_name":"Oncology","level":1,"score":0.42592981457710266},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.3762076497077942},{"id":"https://openalex.org/C23123220","wikidata":"https://www.wikidata.org/wiki/Q816826","display_name":"Information retrieval","level":1,"score":0.37172043323516846},{"id":"https://openalex.org/C126322002","wikidata":"https://www.wikidata.org/wiki/Q11180","display_name":"Internal medicine","level":1,"score":0.3412831425666809},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.32648760080337524},{"id":"https://openalex.org/C121608353","wikidata":"https://www.wikidata.org/wiki/Q12078","display_name":"Cancer","level":2,"score":0.25534093379974365},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.13743972778320312},{"id":"https://openalex.org/C142724271","wikidata":"https://www.wikidata.org/wiki/Q7208","display_name":"Pathology","level":1,"score":0.12794017791748047}],"mesh":[{"descriptor_ui":"D002986","descriptor_name":"Clinical Trials as Topic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D002986","descriptor_name":"Clinical Trials as Topic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D002986","descriptor_name":"Clinical Trials as Topic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008495","descriptor_name":"Medical Oncology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008495","descriptor_name":"Medical Oncology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008495","descriptor_name":"Medical Oncology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D009369","descriptor_name":"Neoplasms","qualifier_ui":"Q000188","qualifier_name":"drug therapy","is_major_topic":true},{"descriptor_ui":"D009369","descriptor_name":"Neoplasms","qualifier_ui":"Q000188","qualifier_name":"drug therapy","is_major_topic":true},{"descriptor_ui":"D009369","descriptor_name":"Neoplasms","qualifier_ui":"Q000188","qualifier_name":"drug therapy","is_major_topic":true},{"descriptor_ui":"D009369","descriptor_name":"Neoplasms","qualifier_ui":"Q000628","qualifier_name":"therapy","is_major_topic":true},{"descriptor_ui":"D009369","descriptor_name":"Neoplasms","qualifier_ui":"Q000628","qualifier_name":"therapy","is_major_topic":true},{"descriptor_ui":"D009369","descriptor_name":"Neoplasms","qualifier_ui":"Q000628","qualifier_name":"therapy","is_major_topic":true},{"descriptor_ui":"D015415","descriptor_name":"Biomarkers","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015415","descriptor_name":"Biomarkers","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015415","descriptor_name":"Biomarkers","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D057285","descriptor_name":"Precision Medicine","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D057285","descriptor_name":"Precision Medicine","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D057285","descriptor_name":"Precision Medicine","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":3,"locations":[{"id":"doi:10.1093/database/baad077","is_oa":true,"landing_page_url":"https://doi.org/10.1093/database/baad077","pdf_url":"https://academic.oup.com/database/article-pdf/doi/10.1093/database/baad077/52838167/baad077.pdf","source":{"id":"https://openalex.org/S4210201630","display_name":"Database","issn_l":"1758-0463","issn":["1758-0463"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311647","host_organization_name":"University of Oxford","host_organization_lineage":["https://openalex.org/P4310311647"],"host_organization_lineage_names":["University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Database","raw_type":"journal-article"},{"id":"pmid:37935585","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/37935585","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Database : the journal of biological databases and curation","raw_type":null},{"id":"pmh:oai:pubmedcentral.nih.gov:10630409","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/10630409","pdf_url":"https://pmc.ncbi.nlm.nih.gov/articles/PMC10630409/pdf/baad077.pdf","source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Database (Oxford)","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1093/database/baad077","is_oa":true,"landing_page_url":"https://doi.org/10.1093/database/baad077","pdf_url":"https://academic.oup.com/database/article-pdf/doi/10.1093/database/baad077/52838167/baad077.pdf","source":{"id":"https://openalex.org/S4210201630","display_name":"Database","issn_l":"1758-0463","issn":["1758-0463"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311647","host_organization_name":"University of Oxford","host_organization_lineage":["https://openalex.org/P4310311647"],"host_organization_lineage_names":["University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Database","raw_type":"journal-article"},"sustainable_development_goals":[{"id":"https://metadata.un.org/sdg/4","display_name":"Quality Education","score":0.5199999809265137}],"awards":[{"id":"https://openalex.org/G1121271761","display_name":null,"funder_award_id":"Program","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G1218319465","display_name":null,"funder_award_id":"31771466 92259101","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G1231421488","display_name":null,"funder_award_id":"under","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G1465109388","display_name":null,"funder_award_id":"31771466","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G2087396116","display_name":null,"funder_award_id":"China","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G3317480652","display_name":null,"funder_award_id":"Science","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G391238517","display_name":null,"funder_award_id":", and","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G5994120800","display_name":null,"funder_award_id":"Natural","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G6258415954","display_name":null,"funder_award_id":"Chinese","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G6899371709","display_name":null,"funder_award_id":"2005DKA21300","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G7208327172","display_name":null,"funder_award_id":"92259101","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G8417351188","display_name":null,"funder_award_id":"XDB38040100","funder_id":"https://openalex.org/F4320321133","funder_display_name":"Chinese Academy of Sciences"}],"funders":[{"id":"https://openalex.org/F4320321001","display_name":"National Natural Science Foundation of China","ror":"https://ror.org/01h0zpd94"},{"id":"https://openalex.org/F4320321133","display_name":"Chinese Academy of Sciences","ror":"https://ror.org/034t30j35"}],"has_content":{"pdf":true,"grobid_xml":false},"content_urls":{"pdf":"https://content.openalex.org/works/W4388500594.pdf"},"referenced_works_count":39,"referenced_works":["https://openalex.org/W1610821757","https://openalex.org/W1984068087","https://openalex.org/W2026455681","https://openalex.org/W2106410630","https://openalex.org/W2106578986","https://openalex.org/W2116972869","https://openalex.org/W2122834413","https://openalex.org/W2142016317","https://openalex.org/W2142862978","https://openalex.org/W2148565184","https://openalex.org/W2161375781","https://openalex.org/W2169491861","https://openalex.org/W2226419169","https://openalex.org/W2312079574","https://openalex.org/W2340441220","https://openalex.org/W2412140884","https://openalex.org/W2417483443","https://openalex.org/W2538407824","https://openalex.org/W2551013093","https://openalex.org/W2613362156","https://openalex.org/W2752636837","https://openalex.org/W2806660211","https://openalex.org/W2806763433","https://openalex.org/W2911661483","https://openalex.org/W2915663023","https://openalex.org/W2955781709","https://openalex.org/W2990730188","https://openalex.org/W3048210441","https://openalex.org/W3092864137","https://openalex.org/W3130504265","https://openalex.org/W3131728774","https://openalex.org/W3200998434","https://openalex.org/W3214608846","https://openalex.org/W4294670930","https://openalex.org/W4302303895","https://openalex.org/W6752305268","https://openalex.org/W6765527666","https://openalex.org/W6770249384","https://openalex.org/W6807573415"],"related_works":["https://openalex.org/W2751417344","https://openalex.org/W4392240901","https://openalex.org/W4224251126","https://openalex.org/W4390733788","https://openalex.org/W4405421352","https://openalex.org/W4200579603","https://openalex.org/W3040899714","https://openalex.org/W4389462258","https://openalex.org/W4380786209","https://openalex.org/W4390969366"],"abstract_inverted_index":{"By":[0],"establishing":[1],"omics":[2,172],"sequencing":[3,38],"of":[4,17,25,36,50,78],"patient":[5,37],"tumors":[6],"as":[7,90],"a":[8,143,154],"crucial":[9],"element":[10],"in":[11,60],"cancer":[12,72,91,160],"treatment,":[13],"the":[14,33,48,171,179],"extensive":[15],"implementation":[16],"precision":[18,54,122,135,145,185],"oncology":[19,55,83,123,146,186],"necessitates":[20],"effective":[21],"and":[22,97,142,163],"prompt":[23],"execution":[24],"clinical":[26,43,73,130,162],"studies":[27],"for":[28,70,81,121,182],"approving":[29],"molecular-targeted":[30],"therapies.":[31,98],"However,":[32],"substantial":[34],"volume":[35],"data,":[39],"combined":[40],"with":[41,105,170],"strict":[42],"trial":[44],"criteria,":[45],"increasingly":[46],"complicates":[47],"process":[49,181],"matching":[51,156],"patients":[52,189],"to":[53,192],"studies.":[56],"To":[57],"streamline":[58],"enrollment":[59],"these":[61],"studies,":[62],"we":[63,85,112,152],"developed":[64,153],"OncoCTMiner,":[65],"an":[66],"automated":[67],"pre-screening":[68,180],"platform":[69],"molecular":[71],"trials.":[74,124],"Through":[75],"manual":[76],"tagging":[77],"eligibility":[79,147],"criteria":[80,148],"2227":[82],"trials,":[84,131,187],"identified":[86],"key":[87],"bio-concepts":[88],"such":[89],"types,":[92],"genes,":[93],"alterations,":[94],"drugs,":[95],"biomarkers":[96],"Utilizing":[99],"this":[100],"manually":[101],"annotated":[102],"corpus":[103],"along":[104],"open-source":[106],"biomedical":[107],"natural":[108],"language":[109],"processing":[110],"tools,":[111],"trained":[113],"multiple":[114],"named":[115],"entity":[116],"recognition":[117],"models":[118,126],"specifically":[119],"designed":[120],"These":[125],"analyzed":[127],"460":[128],"952":[129],"revealing":[132],"8.15":[133],"million":[134,139],"medicine":[136],"concepts,":[137],"9.32":[138],"entity-criteria-trial":[140],"triplets":[141],"comprehensive":[144],"database.":[149],"Most":[150],"significantly,":[151],"patient-trial":[155],"system":[157,177],"based":[158],"on":[159],"patients'":[161],"genetic":[164],"profiles,":[165],"which":[166],"can":[167],"seamlessly":[168],"integrate":[169],"data":[173],"analysis":[174],"platform.":[175],"This":[176],"expedites":[178],"potentially":[183],"suitable":[184],"offering":[188],"swifter":[190],"access":[191],"promising":[193],"treatment":[194],"options.":[195],"Database":[196],"URL":[197],"https://oncoctminer.chosenmedinfo.com.":[198]},"counts_by_year":[{"year":2025,"cited_by_count":2},{"year":2024,"cited_by_count":2}],"updated_date":"2026-04-10T15:06:20.359241","created_date":"2025-10-10T00:00:00"}
