{"id":"https://openalex.org/W4377861877","doi":"https://doi.org/10.1093/database/baad025","title":"RNA-Chrom: a manually curated analytical database of RNA\u2013chromatin interactome","display_name":"RNA-Chrom: a manually curated analytical database of RNA\u2013chromatin interactome","publication_year":2023,"publication_date":"2023-01-01","ids":{"openalex":"https://openalex.org/W4377861877","doi":"https://doi.org/10.1093/database/baad025","pmid":"https://pubmed.ncbi.nlm.nih.gov/37221043"},"language":"en","primary_location":{"id":"doi:10.1093/database/baad025","is_oa":true,"landing_page_url":"https://doi.org/10.1093/database/baad025","pdf_url":"https://academic.oup.com/database/article-pdf/doi/10.1093/database/baad025/50622004/baad025.pdf","source":{"id":"https://openalex.org/S4210201630","display_name":"Database","issn_l":"1758-0463","issn":["1758-0463"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311647","host_organization_name":"University of Oxford","host_organization_lineage":["https://openalex.org/P4310311647"],"host_organization_lineage_names":["University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Database","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://academic.oup.com/database/article-pdf/doi/10.1093/database/baad025/50622004/baad025.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5076339752","display_name":"G. K. Ryabykh","orcid":"https://orcid.org/0000-0002-2225-156X"},"institutions":[{"id":"https://openalex.org/I19880235","display_name":"Lomonosov Moscow State University","ror":"https://ror.org/010pmpe69","country_code":"RU","type":"education","lineage":["https://openalex.org/I19880235"]},{"id":"https://openalex.org/I4210107660","display_name":"Institute for Information Transmission Problems","ror":"https://ror.org/013w2d378","country_code":"RU","type":"facility","lineage":["https://openalex.org/I4210107660"]}],"countries":["RU"],"is_corresponding":false,"raw_author_name":"G K Ryabykh","raw_affiliation_strings":["Faculty of Bioengineering and Bioinformatics, Lomonosov Moscow State University , Leninskiye Gory, Moscow 119234, Russia","Kharkevich Institute for Information Transmission Problems RAS , Bolshoy Karetny per., Moscow 127051, Russia"],"raw_orcid":"https://orcid.org/0000-0002-2225-156X","affiliations":[{"raw_affiliation_string":"Faculty of Bioengineering and Bioinformatics, Lomonosov Moscow State University , Leninskiye Gory, Moscow 119234, Russia","institution_ids":["https://openalex.org/I19880235"]},{"raw_affiliation_string":"Kharkevich Institute for Information Transmission Problems RAS , Bolshoy Karetny per., Moscow 127051, Russia","institution_ids":["https://openalex.org/I4210107660"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5038081128","display_name":"S V Kuznetsov","orcid":null},"institutions":[{"id":"https://openalex.org/I19880235","display_name":"Lomonosov Moscow State University","ror":"https://ror.org/010pmpe69","country_code":"RU","type":"education","lineage":["https://openalex.org/I19880235"]}],"countries":["RU"],"is_corresponding":false,"raw_author_name":"S V Kuznetsov","raw_affiliation_strings":["Faculty of Bioengineering and Bioinformatics, Lomonosov Moscow State University , Leninskiye Gory, Moscow 119234, Russia"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Faculty of Bioengineering and Bioinformatics, Lomonosov Moscow State University , Leninskiye Gory, Moscow 119234, Russia","institution_ids":["https://openalex.org/I19880235"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5005434829","display_name":"Yuriy Korostelev","orcid":null},"institutions":[{"id":"https://openalex.org/I4210107660","display_name":"Institute for Information Transmission Problems","ror":"https://ror.org/013w2d378","country_code":"RU","type":"facility","lineage":["https://openalex.org/I4210107660"]}],"countries":["RU"],"is_corresponding":false,"raw_author_name":"Y D Korostelev","raw_affiliation_strings":["Kharkevich Institute for Information Transmission Problems RAS , Bolshoy Karetny per., Moscow 127051, Russia"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Kharkevich Institute for Information Transmission Problems RAS , Bolshoy Karetny per., Moscow 127051, Russia","institution_ids":["https://openalex.org/I4210107660"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5043318101","display_name":"Andrey Sigorskikh","orcid":null},"institutions":[{"id":"https://openalex.org/I19880235","display_name":"Lomonosov Moscow State University","ror":"https://ror.org/010pmpe69","country_code":"RU","type":"education","lineage":["https://openalex.org/I19880235"]}],"countries":["RU"],"is_corresponding":false,"raw_author_name":"A I Sigorskikh","raw_affiliation_strings":["Faculty of Bioengineering and Bioinformatics, Lomonosov Moscow State University , Leninskiye Gory, Moscow 119234, Russia"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Faculty of Bioengineering and Bioinformatics, Lomonosov Moscow State University , Leninskiye Gory, Moscow 119234, Russia","institution_ids":["https://openalex.org/I19880235"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5056241512","display_name":"Anastasia A. Zharikova","orcid":"https://orcid.org/0000-0003-0723-0493"},"institutions":[{"id":"https://openalex.org/I19880235","display_name":"Lomonosov Moscow State University","ror":"https://ror.org/010pmpe69","country_code":"RU","type":"education","lineage":["https://openalex.org/I19880235"]},{"id":"https://openalex.org/I4210107660","display_name":"Institute for Information Transmission Problems","ror":"https://ror.org/013w2d378","country_code":"RU","type":"facility","lineage":["https://openalex.org/I4210107660"]},{"id":"https://openalex.org/I4210112802","display_name":"National Research Center for Preventive Medicine","ror":"https://ror.org/02at9hq18","country_code":"RU","type":"facility","lineage":["https://openalex.org/I4210112802","https://openalex.org/I4210117042"]}],"countries":["RU"],"is_corresponding":false,"raw_author_name":"A A Zharikova","raw_affiliation_strings":["Faculty of Bioengineering and Bioinformatics, Lomonosov Moscow State University , Leninskiye Gory, Moscow 119234, Russia","Kharkevich Institute for Information Transmission Problems RAS , Bolshoy Karetny per., Moscow 127051, Russia","National Medical Research Center for Therapy and Preventive Medicine , Petroverigsky per., Moscow, 101000, Russia"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Faculty of Bioengineering and Bioinformatics, Lomonosov Moscow State University , Leninskiye Gory, Moscow 119234, Russia","institution_ids":["https://openalex.org/I19880235"]},{"raw_affiliation_string":"Kharkevich Institute for Information Transmission Problems RAS , Bolshoy Karetny per., Moscow 127051, Russia","institution_ids":["https://openalex.org/I4210107660"]},{"raw_affiliation_string":"National Medical Research Center for Therapy and Preventive Medicine , Petroverigsky per., Moscow, 101000, Russia","institution_ids":["https://openalex.org/I4210112802"]}]},{"author_position":"last","author":{"id":null,"display_name":"A A Mironov","orcid":null},"institutions":[{"id":"https://openalex.org/I19880235","display_name":"Lomonosov Moscow State University","ror":"https://ror.org/010pmpe69","country_code":"RU","type":"education","lineage":["https://openalex.org/I19880235"]},{"id":"https://openalex.org/I4210107660","display_name":"Institute for Information Transmission Problems","ror":"https://ror.org/013w2d378","country_code":"RU","type":"facility","lineage":["https://openalex.org/I4210107660"]}],"countries":["RU"],"is_corresponding":false,"raw_author_name":"A A Mironov","raw_affiliation_strings":["Faculty of Bioengineering and Bioinformatics, Lomonosov Moscow State University , Leninskiye Gory, Moscow 119234, Russia","Kharkevich Institute for Information Transmission Problems RAS , Bolshoy Karetny per., Moscow 127051, Russia"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Faculty of Bioengineering and Bioinformatics, Lomonosov Moscow State University , Leninskiye Gory, Moscow 119234, Russia","institution_ids":["https://openalex.org/I19880235"]},{"raw_affiliation_string":"Kharkevich Institute for Information Transmission Problems RAS , Bolshoy Karetny per., Moscow 127051, Russia","institution_ids":["https://openalex.org/I4210107660"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":3,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":{"value":1415,"currency":"GBP","value_usd":1735},"apc_paid":{"value":1415,"currency":"GBP","value_usd":1735},"fwci":2.2873,"has_fulltext":true,"cited_by_count":18,"citation_normalized_percentile":{"value":0.88252772,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":99},"biblio":{"volume":"2023","issue":null,"first_page":null,"last_page":null},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10521","display_name":"RNA and protein synthesis mechanisms","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10521","display_name":"RNA and protein synthesis mechanisms","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10222","display_name":"Genomics and Chromatin Dynamics","score":0.9998000264167786,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10604","display_name":"RNA Research and Splicing","score":0.9998000264167786,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/chromatin","display_name":"Chromatin","score":0.8102169036865234},{"id":"https://openalex.org/keywords/interactome","display_name":"Interactome","score":0.7368429899215698},{"id":"https://openalex.org/keywords/genome-browser","display_name":"Genome browser","score":0.6430613994598389},{"id":"https://openalex.org/keywords/rna","display_name":"RNA","score":0.5979373455047607},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.5329993963241577},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.5112524032592773},{"id":"https://openalex.org/keywords/genome","display_name":"Genome","score":0.48756998777389526},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.44067421555519104},{"id":"https://openalex.org/keywords/non-coding-rna","display_name":"Non-coding RNA","score":0.4383120536804199},{"id":"https://openalex.org/keywords/database","display_name":"Database","score":0.3492860198020935},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.34062591195106506},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.3027332127094269},{"id":"https://openalex.org/keywords/genomics","display_name":"Genomics","score":0.2196466326713562}],"concepts":[{"id":"https://openalex.org/C83640560","wikidata":"https://www.wikidata.org/wiki/Q180951","display_name":"Chromatin","level":3,"score":0.8102169036865234},{"id":"https://openalex.org/C9760119","wikidata":"https://www.wikidata.org/wiki/Q841382","display_name":"Interactome","level":3,"score":0.7368429899215698},{"id":"https://openalex.org/C2781148417","wikidata":"https://www.wikidata.org/wiki/Q5533486","display_name":"Genome browser","level":5,"score":0.6430613994598389},{"id":"https://openalex.org/C67705224","wikidata":"https://www.wikidata.org/wiki/Q11053","display_name":"RNA","level":3,"score":0.5979373455047607},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.5329993963241577},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.5112524032592773},{"id":"https://openalex.org/C141231307","wikidata":"https://www.wikidata.org/wiki/Q7020","display_name":"Genome","level":3,"score":0.48756998777389526},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.44067421555519104},{"id":"https://openalex.org/C194993378","wikidata":"https://www.wikidata.org/wiki/Q427087","display_name":"Non-coding RNA","level":4,"score":0.4383120536804199},{"id":"https://openalex.org/C77088390","wikidata":"https://www.wikidata.org/wiki/Q8513","display_name":"Database","level":1,"score":0.3492860198020935},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.34062591195106506},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.3027332127094269},{"id":"https://openalex.org/C189206191","wikidata":"https://www.wikidata.org/wiki/Q222046","display_name":"Genomics","level":4,"score":0.2196466326713562}],"mesh":[{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D002843","descriptor_name":"Chromatin","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D002843","descriptor_name":"Chromatin","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D002843","descriptor_name":"Chromatin","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012313","descriptor_name":"RNA","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012313","descriptor_name":"RNA","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012313","descriptor_name":"RNA","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012323","descriptor_name":"RNA Processing, Post-Transcriptional","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012323","descriptor_name":"RNA Processing, Post-Transcriptional","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012323","descriptor_name":"RNA Processing, Post-Transcriptional","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012326","descriptor_name":"RNA Splicing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012326","descriptor_name":"RNA Splicing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012326","descriptor_name":"RNA Splicing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D030561","descriptor_name":"Databases, Nucleic Acid","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D030561","descriptor_name":"Databases, Nucleic Acid","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D030561","descriptor_name":"Databases, Nucleic Acid","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D051379","descriptor_name":"Mice","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D051379","descriptor_name":"Mice","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D051379","descriptor_name":"Mice","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":3,"locations":[{"id":"doi:10.1093/database/baad025","is_oa":true,"landing_page_url":"https://doi.org/10.1093/database/baad025","pdf_url":"https://academic.oup.com/database/article-pdf/doi/10.1093/database/baad025/50622004/baad025.pdf","source":{"id":"https://openalex.org/S4210201630","display_name":"Database","issn_l":"1758-0463","issn":["1758-0463"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311647","host_organization_name":"University of Oxford","host_organization_lineage":["https://openalex.org/P4310311647"],"host_organization_lineage_names":["University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Database","raw_type":"journal-article"},{"id":"pmid:37221043","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/37221043","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Database : the journal of biological databases and curation","raw_type":null},{"id":"pmh:oai:pubmedcentral.nih.gov:10205464","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/10205464","pdf_url":"https://pmc.ncbi.nlm.nih.gov/articles/PMC10205464/pdf/baad025.pdf","source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Database (Oxford)","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1093/database/baad025","is_oa":true,"landing_page_url":"https://doi.org/10.1093/database/baad025","pdf_url":"https://academic.oup.com/database/article-pdf/doi/10.1093/database/baad025/50622004/baad025.pdf","source":{"id":"https://openalex.org/S4210201630","display_name":"Database","issn_l":"1758-0463","issn":["1758-0463"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311647","host_organization_name":"University of Oxford","host_organization_lineage":["https://openalex.org/P4310311647"],"host_organization_lineage_names":["University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Database","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G3969577304","display_name":null,"funder_award_id":"20-04-","funder_id":"https://openalex.org/F4320321079","funder_display_name":"Russian Foundation for Basic Research"}],"funders":[{"id":"https://openalex.org/F4320321079","display_name":"Russian Foundation for Basic Research","ror":"https://ror.org/02mh1ke95"}],"has_content":{"pdf":true,"grobid_xml":false},"content_urls":{"pdf":"https://content.openalex.org/works/W4377861877.pdf"},"referenced_works_count":61,"referenced_works":["https://openalex.org/W1793796070","https://openalex.org/W1954748167","https://openalex.org/W1972781503","https://openalex.org/W1979768717","https://openalex.org/W1992212213","https://openalex.org/W2007870233","https://openalex.org/W2027042006","https://openalex.org/W2029664411","https://openalex.org/W2053855164","https://openalex.org/W2057325460","https://openalex.org/W2062313490","https://openalex.org/W2074975948","https://openalex.org/W2086399100","https://openalex.org/W2104005232","https://openalex.org/W2120585932","https://openalex.org/W2128016314","https://openalex.org/W2131271579","https://openalex.org/W2134625814","https://openalex.org/W2152623715","https://openalex.org/W2170561196","https://openalex.org/W2172062863","https://openalex.org/W2276045700","https://openalex.org/W2529838505","https://openalex.org/W2561553071","https://openalex.org/W2580814482","https://openalex.org/W2582023661","https://openalex.org/W2733713504","https://openalex.org/W2734709114","https://openalex.org/W2743376548","https://openalex.org/W2755353730","https://openalex.org/W2767918570","https://openalex.org/W2773977105","https://openalex.org/W2806466286","https://openalex.org/W2949983105","https://openalex.org/W2951525917","https://openalex.org/W2952534796","https://openalex.org/W2964849163","https://openalex.org/W2969960851","https://openalex.org/W2992071994","https://openalex.org/W3004897498","https://openalex.org/W3008598131","https://openalex.org/W3011957110","https://openalex.org/W3032387589","https://openalex.org/W3082248099","https://openalex.org/W3093438495","https://openalex.org/W3111040207","https://openalex.org/W3111061871","https://openalex.org/W3111419662","https://openalex.org/W3112986012","https://openalex.org/W3135900624","https://openalex.org/W3154167954","https://openalex.org/W3179915403","https://openalex.org/W3205929334","https://openalex.org/W3210024567","https://openalex.org/W4211053900","https://openalex.org/W4223433160","https://openalex.org/W4226063030","https://openalex.org/W4280552317","https://openalex.org/W4281620392","https://openalex.org/W6732907574","https://openalex.org/W6798773593"],"related_works":["https://openalex.org/W4292634579","https://openalex.org/W2964314049","https://openalex.org/W2022326234","https://openalex.org/W4388694323","https://openalex.org/W4388041411","https://openalex.org/W2058984380","https://openalex.org/W1988125422","https://openalex.org/W2900182103","https://openalex.org/W4365136234","https://openalex.org/W3183769948"],"abstract_inverted_index":{"Every":[0],"year":[1],"there":[2,185],"is":[3,189],"more":[4,6,197],"and":[5,34,51,59,65,75,113,150,183,203],"evidence":[7],"that":[8,71],"non-coding":[9,90],"RNAs":[10,115,164],"play":[11],"an":[12],"important":[13],"role":[14],"in":[15,166,180,218],"biological":[16],"processes":[17],"affecting":[18],"various":[19],"levels":[20],"of":[21,23,30,36,41,67,79,88,105,107,109,111,129,142,172,192,200],"organization":[22],"living":[24],"systems:":[25],"from":[26],"the":[27,85,95,103,119,127,130,140,169,190,209,219],"cellular":[28],"(regulation":[29],"gene":[31],"expression,":[32],"remodeling":[33],"maintenance":[35],"chromatin":[37],"structure,":[38],"co-transcriptional":[39],"suppression":[40],"transposons,":[42],"splicing,":[43],"post-transcriptional":[44],"RNA":[45,141],"modifications,":[46],"etc.)":[47],"to":[48,83,126,136,144,160,174,215],"cell":[49],"populations":[50],"even":[52],"organismal":[53],"ones":[54],"(development,":[55],"aging,":[56],"cancer,":[57],"cardiovascular":[58],"many":[60],"other":[61,207],"diseases).":[62],"The":[63],"development":[64],"creation":[66],"mutually":[68],"complementary":[69],"databases":[70],"will":[72],"aggregate,":[73],"unify":[74],"structure":[76],"different":[77],"types":[78],"data":[80],"can":[81],"help":[82],"reach":[84],"system":[86],"level":[87],"studying":[89],"RNAs.":[91],"Here":[92],"we":[93],"present":[94],"RNA-Chrom":[96],"manually":[97],"curated":[98],"analytical":[99],"database,":[100],"which":[101,154,163],"contains":[102],"coordinates":[104],"billions":[106],"contacts":[108,147],"thousands":[110],"human":[112],"mouse":[114],"with":[116,148,153,168,206],"chromatin.":[117],"Through":[118],"user-friendly":[120],"web":[121,210],"interface":[122,211],"(https://rnachrom2.bioinf.fbb.msu.ru/),":[123],"two":[124],"approaches":[125],"analysis":[128],"RNA-chromatin":[131],"interactome":[132],"were":[133],"implemented.":[134],"Firstly,":[135],"find":[137,161],"out":[138,162],"whether":[139],"interest":[143,173],"a":[145,175,196,213],"user":[146,176,214],"chromatin,":[149],"if":[151,184],"so,":[152],"genes":[155],"or":[156],"DNA":[157,170],"loci?":[158],"Secondly,":[159],"are":[165,186],"contact":[167,201],"locus":[171],"(and":[177],"probably":[178],"participate":[179],"its":[181],"regulation),":[182],"such,":[187],"what":[188],"nature":[191],"their":[193,204],"interaction?":[194],"For":[195],"detailed":[198],"study":[199],"maps":[202],"comparison":[205],"data,":[208],"allows":[212],"view":[216],"them":[217],"UCSC":[220],"Genome":[221],"Browser.":[222],"Database":[223],"URL":[224],"https://genome.ucsc.edu/.":[225]},"counts_by_year":[{"year":2026,"cited_by_count":1},{"year":2025,"cited_by_count":5},{"year":2024,"cited_by_count":9},{"year":2023,"cited_by_count":2},{"year":2022,"cited_by_count":1}],"updated_date":"2026-05-21T06:26:12.895304","created_date":"2025-10-10T00:00:00"}
