{"id":"https://openalex.org/W4377142688","doi":"https://doi.org/10.1093/database/baad020","title":"Developing TeroENZ and TeroMAP modules for the terpenome research platform TeroKit","display_name":"Developing TeroENZ and TeroMAP modules for the terpenome research platform TeroKit","publication_year":2023,"publication_date":"2023-01-01","ids":{"openalex":"https://openalex.org/W4377142688","doi":"https://doi.org/10.1093/database/baad020","pmid":"https://pubmed.ncbi.nlm.nih.gov/37207351"},"language":"en","primary_location":{"id":"doi:10.1093/database/baad020","is_oa":true,"landing_page_url":"https://doi.org/10.1093/database/baad020","pdf_url":"https://academic.oup.com/database/article-pdf/doi/10.1093/database/baad020/50397634/baad020.pdf","source":{"id":"https://openalex.org/S4210201630","display_name":"Database","issn_l":"1758-0463","issn":["1758-0463"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311647","host_organization_name":"University of Oxford","host_organization_lineage":["https://openalex.org/P4310311647"],"host_organization_lineage_names":["University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Database","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://academic.oup.com/database/article-pdf/doi/10.1093/database/baad020/50397634/baad020.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5037793321","display_name":"Nianhang Chen","orcid":null},"institutions":[{"id":"https://openalex.org/I157773358","display_name":"Sun Yat-sen University","ror":"https://ror.org/0064kty71","country_code":"CN","type":"education","lineage":["https://openalex.org/I157773358"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Nianhang Chen","raw_affiliation_strings":["School of Pharmaceutical Sciences, Sun Yat-sen University , Guangzhou 510006, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Pharmaceutical Sciences, Sun Yat-sen University , Guangzhou 510006, China","institution_ids":["https://openalex.org/I157773358"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5101040191","display_name":"Rong Zhang","orcid":"https://orcid.org/0009-0008-9686-3543"},"institutions":[{"id":"https://openalex.org/I157773358","display_name":"Sun Yat-sen University","ror":"https://ror.org/0064kty71","country_code":"CN","type":"education","lineage":["https://openalex.org/I157773358"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Rong Zhang","raw_affiliation_strings":["School of Pharmaceutical Sciences, Sun Yat-sen University , Guangzhou 510006, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Pharmaceutical Sciences, Sun Yat-sen University , Guangzhou 510006, China","institution_ids":["https://openalex.org/I157773358"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5012066268","display_name":"Tao Zeng","orcid":"https://orcid.org/0000-0002-7630-425X"},"institutions":[{"id":"https://openalex.org/I157773358","display_name":"Sun Yat-sen University","ror":"https://ror.org/0064kty71","country_code":"CN","type":"education","lineage":["https://openalex.org/I157773358"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Tao Zeng","raw_affiliation_strings":["School of Pharmaceutical Sciences, Sun Yat-sen University , Guangzhou 510006, China"],"raw_orcid":"https://orcid.org/0000-0002-7630-425X","affiliations":[{"raw_affiliation_string":"School of Pharmaceutical Sciences, Sun Yat-sen University , Guangzhou 510006, China","institution_ids":["https://openalex.org/I157773358"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5018919573","display_name":"Xuting Zhang","orcid":"https://orcid.org/0000-0002-1522-4694"},"institutions":[{"id":"https://openalex.org/I157773358","display_name":"Sun Yat-sen University","ror":"https://ror.org/0064kty71","country_code":"CN","type":"education","lineage":["https://openalex.org/I157773358"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Xuting Zhang","raw_affiliation_strings":["School of Pharmaceutical Sciences, Sun Yat-sen University , Guangzhou 510006, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Pharmaceutical Sciences, Sun Yat-sen University , Guangzhou 510006, China","institution_ids":["https://openalex.org/I157773358"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5103117279","display_name":"Ruibo Wu","orcid":null},"institutions":[{"id":"https://openalex.org/I157773358","display_name":"Sun Yat-sen University","ror":"https://ror.org/0064kty71","country_code":"CN","type":"education","lineage":["https://openalex.org/I157773358"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Ruibo Wu","raw_affiliation_strings":["School of Pharmaceutical Sciences, Sun Yat-sen University , Guangzhou 510006, China"],"raw_orcid":"https://orcid.org/0000-0002-6944-8482","affiliations":[{"raw_affiliation_string":"School of Pharmaceutical Sciences, Sun Yat-sen University , Guangzhou 510006, China","institution_ids":["https://openalex.org/I157773358"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":1,"corresponding_author_ids":[],"corresponding_institution_ids":["https://openalex.org/I157773358"],"apc_list":{"value":1415,"currency":"GBP","value_usd":1735},"apc_paid":{"value":1415,"currency":"GBP","value_usd":1735},"fwci":1.7491,"has_fulltext":true,"cited_by_count":13,"citation_normalized_percentile":{"value":0.84448798,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":99},"biblio":{"volume":"2023","issue":null,"first_page":null,"last_page":null},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11882","display_name":"Plant biochemistry and biosynthesis","score":1.0,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11882","display_name":"Plant biochemistry and biosynthesis","score":1.0,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10252","display_name":"Microbial Natural Products and Biosynthesis","score":0.9957000017166138,"subfield":{"id":"https://openalex.org/subfields/2736","display_name":"Pharmacology"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T11385","display_name":"Natural product bioactivities and synthesis","score":0.9901000261306763,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/terpenoid","display_name":"Terpenoid","score":0.7273154258728027},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.606633186340332},{"id":"https://openalex.org/keywords/database","display_name":"Database","score":0.5788153409957886},{"id":"https://openalex.org/keywords/interfacing","display_name":"Interfacing","score":0.5067391991615295},{"id":"https://openalex.org/keywords/semantic-web","display_name":"Semantic Web","score":0.4568001925945282},{"id":"https://openalex.org/keywords/chemical-database","display_name":"Chemical database","score":0.439965158700943},{"id":"https://openalex.org/keywords/world-wide-web","display_name":"World Wide Web","score":0.4236256778240204},{"id":"https://openalex.org/keywords/enzyme","display_name":"Enzyme","score":0.4223964512348175},{"id":"https://openalex.org/keywords/field","display_name":"Field (mathematics)","score":0.41701388359069824},{"id":"https://openalex.org/keywords/information-retrieval","display_name":"Information retrieval","score":0.40849289298057556},{"id":"https://openalex.org/keywords/chemistry","display_name":"Chemistry","score":0.2729198634624481},{"id":"https://openalex.org/keywords/bioinformatics","display_name":"Bioinformatics","score":0.21674922108650208},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.2127836048603058},{"id":"https://openalex.org/keywords/biochemistry","display_name":"Biochemistry","score":0.1566683053970337},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.07887992262840271}],"concepts":[{"id":"https://openalex.org/C206103511","wikidata":"https://www.wikidata.org/wiki/Q426694","display_name":"Terpenoid","level":2,"score":0.7273154258728027},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.606633186340332},{"id":"https://openalex.org/C77088390","wikidata":"https://www.wikidata.org/wiki/Q8513","display_name":"Database","level":1,"score":0.5788153409957886},{"id":"https://openalex.org/C2776303644","wikidata":"https://www.wikidata.org/wiki/Q1020499","display_name":"Interfacing","level":2,"score":0.5067391991615295},{"id":"https://openalex.org/C2129575","wikidata":"https://www.wikidata.org/wiki/Q54837","display_name":"Semantic Web","level":2,"score":0.4568001925945282},{"id":"https://openalex.org/C203394866","wikidata":"https://www.wikidata.org/wiki/Q2881060","display_name":"Chemical database","level":2,"score":0.439965158700943},{"id":"https://openalex.org/C136764020","wikidata":"https://www.wikidata.org/wiki/Q466","display_name":"World Wide Web","level":1,"score":0.4236256778240204},{"id":"https://openalex.org/C181199279","wikidata":"https://www.wikidata.org/wiki/Q8047","display_name":"Enzyme","level":2,"score":0.4223964512348175},{"id":"https://openalex.org/C9652623","wikidata":"https://www.wikidata.org/wiki/Q190109","display_name":"Field (mathematics)","level":2,"score":0.41701388359069824},{"id":"https://openalex.org/C23123220","wikidata":"https://www.wikidata.org/wiki/Q816826","display_name":"Information retrieval","level":1,"score":0.40849289298057556},{"id":"https://openalex.org/C185592680","wikidata":"https://www.wikidata.org/wiki/Q2329","display_name":"Chemistry","level":0,"score":0.2729198634624481},{"id":"https://openalex.org/C60644358","wikidata":"https://www.wikidata.org/wiki/Q128570","display_name":"Bioinformatics","level":1,"score":0.21674922108650208},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.2127836048603058},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.1566683053970337},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.07887992262840271},{"id":"https://openalex.org/C9390403","wikidata":"https://www.wikidata.org/wiki/Q3966","display_name":"Computer hardware","level":1,"score":0.0},{"id":"https://openalex.org/C202444582","wikidata":"https://www.wikidata.org/wiki/Q837863","display_name":"Pure mathematics","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D001688","descriptor_name":"Biological Products","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D001688","descriptor_name":"Biological Products","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D001688","descriptor_name":"Biological Products","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D013729","descriptor_name":"Terpenes","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D013729","descriptor_name":"Terpenes","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D013729","descriptor_name":"Terpenes","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D053898","descriptor_name":"Biosynthetic Pathways","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D053898","descriptor_name":"Biosynthetic Pathways","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D053898","descriptor_name":"Biosynthetic Pathways","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D060847","descriptor_name":"Metabolic Engineering","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D060847","descriptor_name":"Metabolic Engineering","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D060847","descriptor_name":"Metabolic Engineering","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true}],"locations_count":3,"locations":[{"id":"doi:10.1093/database/baad020","is_oa":true,"landing_page_url":"https://doi.org/10.1093/database/baad020","pdf_url":"https://academic.oup.com/database/article-pdf/doi/10.1093/database/baad020/50397634/baad020.pdf","source":{"id":"https://openalex.org/S4210201630","display_name":"Database","issn_l":"1758-0463","issn":["1758-0463"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311647","host_organization_name":"University of Oxford","host_organization_lineage":["https://openalex.org/P4310311647"],"host_organization_lineage_names":["University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Database","raw_type":"journal-article"},{"id":"pmid:37207351","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/37207351","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Database : the journal of biological databases and curation","raw_type":null},{"id":"pmh:oai:pubmedcentral.nih.gov:10380177","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/10380177","pdf_url":"https://pmc.ncbi.nlm.nih.gov/articles/PMC10380177/pdf/baad020.pdf","source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Database (Oxford)","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1093/database/baad020","is_oa":true,"landing_page_url":"https://doi.org/10.1093/database/baad020","pdf_url":"https://academic.oup.com/database/article-pdf/doi/10.1093/database/baad020/50397634/baad020.pdf","source":{"id":"https://openalex.org/S4210201630","display_name":"Database","issn_l":"1758-0463","issn":["1758-0463"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311647","host_organization_name":"University of Oxford","host_organization_lineage":["https://openalex.org/P4310311647"],"host_organization_lineage_names":["University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Database","raw_type":"journal-article"},"sustainable_development_goals":[{"id":"https://metadata.un.org/sdg/15","score":0.4099999964237213,"display_name":"Life in Land"}],"awards":[],"funders":[],"has_content":{"pdf":true,"grobid_xml":false},"content_urls":{"pdf":"https://content.openalex.org/works/W4377142688.pdf"},"referenced_works_count":37,"referenced_works":["https://openalex.org/W2075997495","https://openalex.org/W2076029682","https://openalex.org/W2111647009","https://openalex.org/W2126275851","https://openalex.org/W2132926880","https://openalex.org/W2134135813","https://openalex.org/W2142678478","https://openalex.org/W2159482845","https://openalex.org/W2173732482","https://openalex.org/W2461852399","https://openalex.org/W2734811226","https://openalex.org/W2750432728","https://openalex.org/W2750967286","https://openalex.org/W2765513824","https://openalex.org/W2783153403","https://openalex.org/W2942635456","https://openalex.org/W2971082441","https://openalex.org/W2977870980","https://openalex.org/W3007508145","https://openalex.org/W3015516943","https://openalex.org/W3040351768","https://openalex.org/W3048090444","https://openalex.org/W3104537585","https://openalex.org/W3156458251","https://openalex.org/W3159355684","https://openalex.org/W3174736387","https://openalex.org/W3177828909","https://openalex.org/W3197526562","https://openalex.org/W3203635681","https://openalex.org/W3211718555","https://openalex.org/W3211795435","https://openalex.org/W4220724567","https://openalex.org/W4224300387","https://openalex.org/W4225612076","https://openalex.org/W4229013123","https://openalex.org/W4281697264","https://openalex.org/W4294216483"],"related_works":["https://openalex.org/W2136647108","https://openalex.org/W1965180958","https://openalex.org/W2350029007","https://openalex.org/W1973428399","https://openalex.org/W2152662857","https://openalex.org/W2087762413","https://openalex.org/W2003932708","https://openalex.org/W4308221833","https://openalex.org/W1503231262","https://openalex.org/W2380667145"],"abstract_inverted_index":{"Terpenoids":[0],"and":[1,10,43,77,84,103,106,126,173],"their":[2,96],"derivatives":[3],"are":[4,11,175],"collectively":[5],"known":[6],"as":[7,121],"the":[8,12,70,82,88,161,178,187],"terpenome":[9],"largest":[13],"class":[14],"of":[15,24,45,165,189],"natural":[16,47],"products,":[17],"whose":[18],"biosynthesis":[19],"refers":[20],"to":[21,50,95,112,147,183],"various":[22],"kinds":[23],"enzymes.":[25],"To":[26],"date,":[27],"there":[28],"is":[29,35,117,144],"no":[30],"terpenome-related":[31],"enzyme":[32,39],"database,":[33],"which":[34],"a":[36,58,109,132,139],"desire":[37],"for":[38,119,135],"mining,":[40],"metabolic":[41],"engineering":[42],"discovery":[44],"new":[46],"products":[48],"related":[49],"terpenoids.":[51],"In":[52],"this":[53],"work,":[54],"we":[55,91],"have":[56],"constructed":[57,146],"comprehensive":[59],"database":[60,164],"called":[61],"TeroENZ":[62],"(http://terokit.qmclab.com/browse_enz.html)":[63],"containing":[64],"13":[65],"462":[66],"enzymes":[67,93],"involved":[68],"in":[69,81],"terpenoid":[71,151,166,190],"biosynthetic":[72],"pathway,":[73],"covering":[74],"2541":[75],"species":[76],"4293":[78],"reactions":[79,98,153],"reported":[80],"literature":[83],"public":[85],"databases.":[86],"At":[87],"same":[89],"time,":[90],"classify":[92],"according":[94,111],"catalytic":[97],"into":[99,154,177],"cyclase,":[100],"oxidoreductase,":[101],"transferase,":[102],"so":[104],"on,":[105],"also":[107,130,145],"make":[108],"classification":[110,116],"species.":[113],"This":[114],"meticulous":[115],"beneficial":[118],"users":[120],"it":[122],"can":[123],"be":[124],"retrieved":[125],"downloaded":[127],"conveniently.":[128],"We":[129],"provide":[131],"computational":[133],"module":[134,140],"isozyme":[136],"prediction.":[137],"Moreover,":[138],"named":[141],"TeroMAP":[142],"(http://terokit.qmclab.com/browse_rxn.html)":[143],"organize":[148],"all":[149,170],"available":[150],"enzymatic":[152],"an":[155],"interactive":[156],"network":[157],"by":[158],"interfacing":[159],"with":[160],"previously":[162],"established":[163],"compounds,":[167],"TeroMOL.":[168],"Finally,":[169],"these":[171],"databases":[172],"modules":[174],"integrated":[176],"web":[179],"server":[180],"TeroKit":[181],"(http://terokit.qmclab.com/)":[182],"shed":[184],"light":[185],"on":[186],"field":[188],"research.":[191],"Database":[192],"URL":[193],"http://terokit.qmclab.com/.":[194]},"counts_by_year":[{"year":2026,"cited_by_count":1},{"year":2025,"cited_by_count":7},{"year":2024,"cited_by_count":4},{"year":2023,"cited_by_count":1}],"updated_date":"2026-05-21T06:26:12.895304","created_date":"2025-10-10T00:00:00"}
