{"id":"https://openalex.org/W4296024012","doi":"https://doi.org/10.1093/database/baac083","title":"TFLink: an integrated gateway to access transcription factor\u2013target gene interactions for multiple species","display_name":"TFLink: an integrated gateway to access transcription factor\u2013target gene interactions for multiple species","publication_year":2022,"publication_date":"2022-01-01","ids":{"openalex":"https://openalex.org/W4296024012","doi":"https://doi.org/10.1093/database/baac083","pmid":"https://pubmed.ncbi.nlm.nih.gov/36124642"},"language":"en","primary_location":{"id":"doi:10.1093/database/baac083","is_oa":true,"landing_page_url":"https://doi.org/10.1093/database/baac083","pdf_url":"https://academic.oup.com/database/article-pdf/doi/10.1093/database/baac083/45888472/baac083.pdf","source":{"id":"https://openalex.org/S4210201630","display_name":"Database","issn_l":"1758-0463","issn":["1758-0463"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311647","host_organization_name":"University of Oxford","host_organization_lineage":["https://openalex.org/P4310311647"],"host_organization_lineage_names":["University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Database","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://academic.oup.com/database/article-pdf/doi/10.1093/database/baac083/45888472/baac083.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5049475232","display_name":"Orsolya Liska","orcid":"https://orcid.org/0000-0002-9895-7120"},"institutions":[{"id":"https://openalex.org/I106118109","display_name":"E\u00f6tv\u00f6s Lor\u00e1nd University","ror":"https://ror.org/01jsq2704","country_code":"HU","type":"education","lineage":["https://openalex.org/I106118109"]},{"id":"https://openalex.org/I227486990","display_name":"University of Szeged","ror":"https://ror.org/01pnej532","country_code":"HU","type":"education","lineage":["https://openalex.org/I227486990"]},{"id":"https://openalex.org/I2800351701","display_name":"HUN-REN Szegedi Biol\u00f3giai Kutat\u00f3k\u00f6zpont","ror":"https://ror.org/016gb1631","country_code":"HU","type":"facility","lineage":["https://openalex.org/I2800351701","https://openalex.org/I7597260"]},{"id":"https://openalex.org/I4210103004","display_name":"Institute of Biochemistry","ror":"https://ror.org/022dvs210","country_code":"HU","type":"facility","lineage":["https://openalex.org/I2800351701","https://openalex.org/I4210103004","https://openalex.org/I7597260"]},{"id":"https://openalex.org/I4387152226","display_name":"Hungarian Research Network","ror":"https://ror.org/04w6pnc49","country_code":"HU","type":"other","lineage":["https://openalex.org/I4387152226"]}],"countries":["HU"],"is_corresponding":false,"raw_author_name":"Orsolya Liska","raw_affiliation_strings":["Department of Genetics, ELTE E\u00f6tv\u00f6s Lor\u00e1nd University , P\u00e1zm\u00e1ny P. stny. 1/C, Budapest 1117, Hungary","Doctoral School of Biology, University of Szeged , K\u00f6z\u00e9p fasor 52, Szeged 6726, Hungary","HCEMM-BRC Metabolic Systems Biology Research Group , Temesv\u00e1ri krt. 62, Szeged 6726, Hungary","Synthetic and Systems Biology Unit, Institute of Biochemistry, Biological Research Centre, E\u00f6tv\u00f6s Lor\u00e1nd Research Network (ELKH) , Temesv\u00e1ri krt. 62, Szeged 6726, Hungary"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Genetics, ELTE E\u00f6tv\u00f6s Lor\u00e1nd University , P\u00e1zm\u00e1ny P. stny. 1/C, Budapest 1117, Hungary","institution_ids":["https://openalex.org/I106118109"]},{"raw_affiliation_string":"Doctoral School of Biology, University of Szeged , K\u00f6z\u00e9p fasor 52, Szeged 6726, Hungary","institution_ids":["https://openalex.org/I227486990"]},{"raw_affiliation_string":"HCEMM-BRC Metabolic Systems Biology Research Group , Temesv\u00e1ri krt. 62, Szeged 6726, Hungary","institution_ids":["https://openalex.org/I2800351701"]},{"raw_affiliation_string":"Synthetic and Systems Biology Unit, Institute of Biochemistry, Biological Research Centre, E\u00f6tv\u00f6s Lor\u00e1nd Research Network (ELKH) , Temesv\u00e1ri krt. 62, Szeged 6726, Hungary","institution_ids":["https://openalex.org/I2800351701","https://openalex.org/I4210103004","https://openalex.org/I4387152226"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5015157681","display_name":"Bal\u00e1zs Boh\u00e1r","orcid":"https://orcid.org/0000-0002-3033-5448"},"institutions":[{"id":"https://openalex.org/I106118109","display_name":"E\u00f6tv\u00f6s Lor\u00e1nd University","ror":"https://ror.org/01jsq2704","country_code":"HU","type":"education","lineage":["https://openalex.org/I106118109"]},{"id":"https://openalex.org/I4210100714","display_name":"Earlham Institute","ror":"https://ror.org/018cxtf62","country_code":"GB","type":"facility","lineage":["https://openalex.org/I2799693246","https://openalex.org/I4210087105","https://openalex.org/I4210100714"]}],"countries":["GB","HU"],"is_corresponding":false,"raw_author_name":"Bal\u00e1zs Boh\u00e1r","raw_affiliation_strings":["Department of Genetics, ELTE E\u00f6tv\u00f6s Lor\u00e1nd University , P\u00e1zm\u00e1ny P. stny. 1/C, Budapest 1117, Hungary","Earlham Institute , Colney Ln, Norwich NR4 7UZ, UK"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Genetics, ELTE E\u00f6tv\u00f6s Lor\u00e1nd University , P\u00e1zm\u00e1ny P. stny. 1/C, Budapest 1117, Hungary","institution_ids":["https://openalex.org/I106118109"]},{"raw_affiliation_string":"Earlham Institute , Colney Ln, Norwich NR4 7UZ, UK","institution_ids":["https://openalex.org/I4210100714"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5006042313","display_name":"Andr\u00e1s Hidas","orcid":"https://orcid.org/0000-0002-6030-8459"},"institutions":[{"id":"https://openalex.org/I106118109","display_name":"E\u00f6tv\u00f6s Lor\u00e1nd University","ror":"https://ror.org/01jsq2704","country_code":"HU","type":"education","lineage":["https://openalex.org/I106118109"]},{"id":"https://openalex.org/I4210134135","display_name":"HUN-REN Centre for Ecological Research","ror":"https://ror.org/04bhfmv97","country_code":"HU","type":"facility","lineage":["https://openalex.org/I4210134135","https://openalex.org/I4387152226"]},{"id":"https://openalex.org/I4387152226","display_name":"Hungarian Research Network","ror":"https://ror.org/04w6pnc49","country_code":"HU","type":"other","lineage":["https://openalex.org/I4387152226"]}],"countries":["HU"],"is_corresponding":false,"raw_author_name":"Andr\u00e1s Hidas","raw_affiliation_strings":["Department of Genetics, ELTE E\u00f6tv\u00f6s Lor\u00e1nd University , P\u00e1zm\u00e1ny P. stny. 1/C, Budapest 1117, Hungary","Institute of Aquatic Ecology, Centre for Ecological Research, E\u00f6tv\u00f6s Lor\u00e1nd Research Network (ELKH) , Karolina \u00fat 29, Budapest 1113, Hungary"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Genetics, ELTE E\u00f6tv\u00f6s Lor\u00e1nd University , P\u00e1zm\u00e1ny P. stny. 1/C, Budapest 1117, Hungary","institution_ids":["https://openalex.org/I106118109"]},{"raw_affiliation_string":"Institute of Aquatic Ecology, Centre for Ecological Research, E\u00f6tv\u00f6s Lor\u00e1nd Research Network (ELKH) , Karolina \u00fat 29, Budapest 1113, Hungary","institution_ids":["https://openalex.org/I4210134135","https://openalex.org/I4387152226"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5011513198","display_name":"Tam\u00e1s Korcsm\u00e1ros","orcid":"https://orcid.org/0000-0003-1717-996X"},"institutions":[{"id":"https://openalex.org/I2799300731","display_name":"Norwich Research Park","ror":"https://ror.org/0062dz060","country_code":"GB","type":"archive","lineage":["https://openalex.org/I2799300731"]},{"id":"https://openalex.org/I3018370718","display_name":"Quadram Institute","ror":"https://ror.org/04td3ys19","country_code":"GB","type":"facility","lineage":["https://openalex.org/I2799693246","https://openalex.org/I3018370718","https://openalex.org/I4210087105"]},{"id":"https://openalex.org/I4210100714","display_name":"Earlham Institute","ror":"https://ror.org/018cxtf62","country_code":"GB","type":"facility","lineage":["https://openalex.org/I2799693246","https://openalex.org/I4210087105","https://openalex.org/I4210100714"]},{"id":"https://openalex.org/I47508984","display_name":"Imperial College London","ror":"https://ror.org/041kmwe10","country_code":"GB","type":"education","lineage":["https://openalex.org/I47508984"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Tam\u00e1s Korcsm\u00e1ros","raw_affiliation_strings":["Earlham Institute , Colney Ln, Norwich NR4 7UZ, UK","Faculty of Medicine, Imperial College London, South Kensington Campus , London SW7 2AZ, UK","Quadram Institute Bioscience, Norwich Research Park , Norwich NR4 7UQ, UK"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Earlham Institute , Colney Ln, Norwich NR4 7UZ, UK","institution_ids":["https://openalex.org/I4210100714"]},{"raw_affiliation_string":"Faculty of Medicine, Imperial College London, South Kensington Campus , London SW7 2AZ, UK","institution_ids":["https://openalex.org/I47508984"]},{"raw_affiliation_string":"Quadram Institute Bioscience, Norwich Research Park , Norwich NR4 7UQ, UK","institution_ids":["https://openalex.org/I3018370718","https://openalex.org/I2799300731"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5031981177","display_name":"Bal\u00e1zs Papp","orcid":"https://orcid.org/0000-0003-3093-8852"},"institutions":[{"id":"https://openalex.org/I2800351701","display_name":"HUN-REN Szegedi Biol\u00f3giai Kutat\u00f3k\u00f6zpont","ror":"https://ror.org/016gb1631","country_code":"HU","type":"facility","lineage":["https://openalex.org/I2800351701","https://openalex.org/I7597260"]},{"id":"https://openalex.org/I4210103004","display_name":"Institute of Biochemistry","ror":"https://ror.org/022dvs210","country_code":"HU","type":"facility","lineage":["https://openalex.org/I2800351701","https://openalex.org/I4210103004","https://openalex.org/I7597260"]},{"id":"https://openalex.org/I4387152226","display_name":"Hungarian Research Network","ror":"https://ror.org/04w6pnc49","country_code":"HU","type":"other","lineage":["https://openalex.org/I4387152226"]}],"countries":["HU"],"is_corresponding":false,"raw_author_name":"Bal\u00e1zs Papp","raw_affiliation_strings":["HCEMM-BRC Metabolic Systems Biology Research Group , Temesv\u00e1ri krt. 62, Szeged 6726, Hungary","Synthetic and Systems Biology Unit, Institute of Biochemistry, Biological Research Centre, E\u00f6tv\u00f6s Lor\u00e1nd Research Network (ELKH) , Temesv\u00e1ri krt. 62, Szeged 6726, Hungary"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"HCEMM-BRC Metabolic Systems Biology Research Group , Temesv\u00e1ri krt. 62, Szeged 6726, Hungary","institution_ids":["https://openalex.org/I2800351701"]},{"raw_affiliation_string":"Synthetic and Systems Biology Unit, Institute of Biochemistry, Biological Research Centre, E\u00f6tv\u00f6s Lor\u00e1nd Research Network (ELKH) , Temesv\u00e1ri krt. 62, Szeged 6726, Hungary","institution_ids":["https://openalex.org/I2800351701","https://openalex.org/I4210103004","https://openalex.org/I4387152226"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5012703372","display_name":"D\u00e1vid Fazekas","orcid":"https://orcid.org/0000-0001-7605-592X"},"institutions":[{"id":"https://openalex.org/I106118109","display_name":"E\u00f6tv\u00f6s Lor\u00e1nd University","ror":"https://ror.org/01jsq2704","country_code":"HU","type":"education","lineage":["https://openalex.org/I106118109"]},{"id":"https://openalex.org/I4210100714","display_name":"Earlham Institute","ror":"https://ror.org/018cxtf62","country_code":"GB","type":"facility","lineage":["https://openalex.org/I2799693246","https://openalex.org/I4210087105","https://openalex.org/I4210100714"]}],"countries":["GB","HU"],"is_corresponding":false,"raw_author_name":"D\u00e1vid Fazekas","raw_affiliation_strings":["Department of Genetics, ELTE E\u00f6tv\u00f6s Lor\u00e1nd University , P\u00e1zm\u00e1ny P. stny. 1/C, Budapest 1117, Hungary","Earlham Institute , Colney Ln, Norwich NR4 7UZ, UK"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Genetics, ELTE E\u00f6tv\u00f6s Lor\u00e1nd University , P\u00e1zm\u00e1ny P. stny. 1/C, Budapest 1117, Hungary","institution_ids":["https://openalex.org/I106118109"]},{"raw_affiliation_string":"Earlham Institute , Colney Ln, Norwich NR4 7UZ, UK","institution_ids":["https://openalex.org/I4210100714"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5005200422","display_name":"Eszter Ari","orcid":"https://orcid.org/0000-0001-7774-1067"},"institutions":[{"id":"https://openalex.org/I106118109","display_name":"E\u00f6tv\u00f6s Lor\u00e1nd University","ror":"https://ror.org/01jsq2704","country_code":"HU","type":"education","lineage":["https://openalex.org/I106118109"]},{"id":"https://openalex.org/I2800351701","display_name":"HUN-REN Szegedi Biol\u00f3giai Kutat\u00f3k\u00f6zpont","ror":"https://ror.org/016gb1631","country_code":"HU","type":"facility","lineage":["https://openalex.org/I2800351701","https://openalex.org/I7597260"]},{"id":"https://openalex.org/I4210103004","display_name":"Institute of Biochemistry","ror":"https://ror.org/022dvs210","country_code":"HU","type":"facility","lineage":["https://openalex.org/I2800351701","https://openalex.org/I4210103004","https://openalex.org/I7597260"]},{"id":"https://openalex.org/I4387152226","display_name":"Hungarian Research Network","ror":"https://ror.org/04w6pnc49","country_code":"HU","type":"other","lineage":["https://openalex.org/I4387152226"]}],"countries":["HU"],"is_corresponding":true,"raw_author_name":"Eszter Ari","raw_affiliation_strings":["Department of Genetics, ELTE E\u00f6tv\u00f6s Lor\u00e1nd University , P\u00e1zm\u00e1ny P. stny. 1/C, Budapest 1117, Hungary","HCEMM-BRC Metabolic Systems Biology Research Group , Temesv\u00e1ri krt. 62, Szeged 6726, Hungary","Synthetic and Systems Biology Unit, Institute of Biochemistry, Biological Research Centre, E\u00f6tv\u00f6s Lor\u00e1nd Research Network (ELKH) , Temesv\u00e1ri krt. 62, Szeged 6726, Hungary"],"raw_orcid":"https://orcid.org/0000-0001-7774-1067","affiliations":[{"raw_affiliation_string":"Department of Genetics, ELTE E\u00f6tv\u00f6s Lor\u00e1nd University , P\u00e1zm\u00e1ny P. stny. 1/C, Budapest 1117, Hungary","institution_ids":["https://openalex.org/I106118109"]},{"raw_affiliation_string":"HCEMM-BRC Metabolic Systems Biology Research Group , Temesv\u00e1ri krt. 62, Szeged 6726, Hungary","institution_ids":["https://openalex.org/I2800351701"]},{"raw_affiliation_string":"Synthetic and Systems Biology Unit, Institute of Biochemistry, Biological Research Centre, E\u00f6tv\u00f6s Lor\u00e1nd Research Network (ELKH) , Temesv\u00e1ri krt. 62, Szeged 6726, Hungary","institution_ids":["https://openalex.org/I2800351701","https://openalex.org/I4210103004","https://openalex.org/I4387152226"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":7,"corresponding_author_ids":["https://openalex.org/A5005200422"],"corresponding_institution_ids":["https://openalex.org/I106118109","https://openalex.org/I2800351701","https://openalex.org/I4210103004","https://openalex.org/I4387152226"],"apc_list":{"value":1415,"currency":"GBP","value_usd":1735},"apc_paid":{"value":1415,"currency":"GBP","value_usd":1735},"fwci":10.1386,"has_fulltext":true,"cited_by_count":143,"citation_normalized_percentile":{"value":0.99057497,"is_in_top_1_percent":true,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":99,"max":100},"biblio":{"volume":"2022","issue":null,"first_page":null,"last_page":null},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10222","display_name":"Genomics and Chromatin Dynamics","score":0.9980999827384949,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10222","display_name":"Genomics and Chromatin Dynamics","score":0.9980999827384949,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9927999973297119,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9922000169754028,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/gateway","display_name":"Gateway (web page)","score":0.808650016784668},{"id":"https://openalex.org/keywords/transcription-factor","display_name":"Transcription factor","score":0.5876214504241943},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.5215932130813599},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.4888250231742859},{"id":"https://openalex.org/keywords/world-wide-web","display_name":"World Wide Web","score":0.45914173126220703},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.41582798957824707},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.3230920135974884},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.31044140458106995}],"concepts":[{"id":"https://openalex.org/C2777710495","wikidata":"https://www.wikidata.org/wiki/Q5527195","display_name":"Gateway (web page)","level":2,"score":0.808650016784668},{"id":"https://openalex.org/C86339819","wikidata":"https://www.wikidata.org/wiki/Q407384","display_name":"Transcription factor","level":3,"score":0.5876214504241943},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.5215932130813599},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.4888250231742859},{"id":"https://openalex.org/C136764020","wikidata":"https://www.wikidata.org/wiki/Q466","display_name":"World Wide Web","level":1,"score":0.45914173126220703},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.41582798957824707},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.3230920135974884},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.31044140458106995}],"mesh":[{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D005786","descriptor_name":"Gene Expression Regulation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D005786","descriptor_name":"Gene Expression Regulation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D005786","descriptor_name":"Gene Expression Regulation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D005786","descriptor_name":"Gene Expression Regulation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D005786","descriptor_name":"Gene Expression Regulation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014157","descriptor_name":"Transcription Factors","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D014157","descriptor_name":"Transcription Factors","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D014157","descriptor_name":"Transcription Factors","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D014157","descriptor_name":"Transcription Factors","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D014157","descriptor_name":"Transcription Factors","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D014157","descriptor_name":"Transcription Factors","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":true},{"descriptor_ui":"D014157","descriptor_name":"Transcription Factors","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":true},{"descriptor_ui":"D014157","descriptor_name":"Transcription Factors","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":true},{"descriptor_ui":"D014157","descriptor_name":"Transcription Factors","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":true},{"descriptor_ui":"D014157","descriptor_name":"Transcription Factors","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":true},{"descriptor_ui":"D015027","descriptor_name":"Zebrafish","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D015027","descriptor_name":"Zebrafish","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D015027","descriptor_name":"Zebrafish","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D015027","descriptor_name":"Zebrafish","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D015027","descriptor_name":"Zebrafish","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D051379","descriptor_name":"Mice","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D051379","descriptor_name":"Mice","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D051379","descriptor_name":"Mice","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D051379","descriptor_name":"Mice","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D051379","descriptor_name":"Mice","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D051381","descriptor_name":"Rats","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D051381","descriptor_name":"Rats","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D051381","descriptor_name":"Rats","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D051381","descriptor_name":"Rats","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D051381","descriptor_name":"Rats","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":6,"locations":[{"id":"doi:10.1093/database/baac083","is_oa":true,"landing_page_url":"https://doi.org/10.1093/database/baac083","pdf_url":"https://academic.oup.com/database/article-pdf/doi/10.1093/database/baac083/45888472/baac083.pdf","source":{"id":"https://openalex.org/S4210201630","display_name":"Database","issn_l":"1758-0463","issn":["1758-0463"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311647","host_organization_name":"University of Oxford","host_organization_lineage":["https://openalex.org/P4310311647"],"host_organization_lineage_names":["University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Database","raw_type":"journal-article"},{"id":"pmid:36124642","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/36124642","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Database : the journal of biological databases and curation","raw_type":null},{"id":"pmh:oai:real.mtak.hu:159241","is_oa":false,"landing_page_url":null,"pdf_url":null,"source":{"id":"https://openalex.org/S4306400081","display_name":"Repository of the Academy's Library (Library of the Hungarian Academy of Sciences)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I4210140733","host_organization_name":"Library and Information Centre of the Hungarian Academy of Sciences","host_organization_lineage":["https://openalex.org/I4210140733"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"acceptedVersion","is_accepted":true,"is_published":false,"raw_source_name":"","raw_type":"Article"},{"id":"pmh:oai:edit.elte.hu:10831/114186","is_oa":true,"landing_page_url":"http://hdl.handle.net/10831/114186","pdf_url":null,"source":{"id":"https://openalex.org/S4306400126","display_name":"ELTE Digital Institutional Repository (EDIT) (E\u00f6tv\u00f6s Lor\u00e1nd University)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I106118109","host_organization_name":"E\u00f6tv\u00f6s Lor\u00e1nd University","host_organization_lineage":["https://openalex.org/I106118109"],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"info:eu-repo/semantics/article"},{"id":"pmh:oai:pubmedcentral.nih.gov:9480832","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/9480832","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Database (Oxford)","raw_type":"Text"},{"id":"pmh:oai:spiral.imperial.ac.uk:10044/1/99806","is_oa":true,"landing_page_url":"http://hdl.handle.net/10044/1/99806","pdf_url":null,"source":{"id":"https://openalex.org/S4306401396","display_name":"Spiral (Imperial College London)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I47508984","host_organization_name":"Imperial College London","host_organization_lineage":["https://openalex.org/I47508984"],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"8","raw_type":"Journal Article"}],"best_oa_location":{"id":"doi:10.1093/database/baac083","is_oa":true,"landing_page_url":"https://doi.org/10.1093/database/baac083","pdf_url":"https://academic.oup.com/database/article-pdf/doi/10.1093/database/baac083/45888472/baac083.pdf","source":{"id":"https://openalex.org/S4210201630","display_name":"Database","issn_l":"1758-0463","issn":["1758-0463"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311647","host_organization_name":"University of Oxford","host_organization_lineage":["https://openalex.org/P4310311647"],"host_organization_lineage_names":["University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Database","raw_type":"journal-article"},"sustainable_development_goals":[{"display_name":"Life in Land","id":"https://metadata.un.org/sdg/15","score":0.49000000953674316}],"awards":[{"id":"https://openalex.org/G1762441168","display_name":null,"funder_award_id":"ISP Grant BB/R012490/1","funder_id":"https://openalex.org/F4320334629","funder_display_name":"Biotechnology and Biological Sciences Research Council"},{"id":"https://openalex.org/G2642974238","display_name":null,"funder_award_id":"739593","funder_id":"https://openalex.org/F4320332999","funder_display_name":"Horizon 2020 Framework Programme"},{"id":"https://openalex.org/G3603218604","display_name":null,"funder_award_id":"PD 131839","funder_id":"https://openalex.org/F4320326762","funder_display_name":"Nemzeti Kutat\u00e1si Fejleszt\u00e9si \u00e9s Innov\u00e1ci\u00f3s Hivatal"},{"id":"https://openalex.org/G3870339886","display_name":null,"funder_award_id":"BB/R012490/","funder_id":"https://openalex.org/F4320334629","funder_display_name":"Biotechnology and Biological Sciences Research Council"},{"id":"https://openalex.org/G4325031739","display_name":null,"funder_award_id":"Core Strategic Programme Grant BB/CSP17270/1","funder_id":"https://openalex.org/F4320334629","funder_display_name":"Biotechnology and Biological Sciences Research Council"},{"id":"https://openalex.org/G5750525336","display_name":null,"funder_award_id":"BBS/E/T/000PR9817","funder_id":"https://openalex.org/F4320334629","funder_display_name":"Biotechnology and Biological Sciences Research Council"},{"id":"https://openalex.org/G7329839912","display_name":null,"funder_award_id":"739593","funder_id":"https://openalex.org/F4320320300","funder_display_name":"European Commission"},{"id":"https://openalex.org/G7842005466","display_name":null,"funder_award_id":"Horizon 2020","funder_id":"https://openalex.org/F4320320300","funder_display_name":"European Commission"},{"id":"https://openalex.org/G8141515522","display_name":null,"funder_award_id":"BBS/E/T/000PR9819","funder_id":"https://openalex.org/F4320334629","funder_display_name":"Biotechnology and Biological Sciences Research Council"},{"id":"https://openalex.org/G8413168614","display_name":null,"funder_award_id":"KKP 129814","funder_id":"https://openalex.org/F4320326762","funder_display_name":"Nemzeti Kutat\u00e1si Fejleszt\u00e9si \u00e9s Innov\u00e1ci\u00f3s Hivatal"},{"id":"https://openalex.org/G917981861","display_name":null,"funder_award_id":"R012490","funder_id":"https://openalex.org/F4320334629","funder_display_name":"Biotechnology and Biological Sciences Research Council"},{"id":"https://openalex.org/G94154778","display_name":null,"funder_award_id":"BB/CSP17270/1","funder_id":"https://openalex.org/F4320334629","funder_display_name":"Biotechnology and Biological Sciences Research Council"}],"funders":[{"id":"https://openalex.org/F4320320300","display_name":"European Commission","ror":"https://ror.org/00k4n6c32"},{"id":"https://openalex.org/F4320326762","display_name":"Nemzeti Kutat\u00e1si Fejleszt\u00e9si \u00e9s Innov\u00e1ci\u00f3s Hivatal","ror":null},{"id":"https://openalex.org/F4320332167","display_name":"Directorate for Biological Sciences","ror":"https://ror.org/001xhss06"},{"id":"https://openalex.org/F4320332999","display_name":"Horizon 2020 Framework Programme","ror":"https://ror.org/00k4n6c32"},{"id":"https://openalex.org/F4320334629","display_name":"Biotechnology and Biological Sciences Research Council","ror":"https://ror.org/00cwqg982"},{"id":"https://openalex.org/F4320336675","display_name":"National Research, Development and Innovation Office","ror":null}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W4296024012.pdf","grobid_xml":"https://content.openalex.org/works/W4296024012.grobid-xml"},"referenced_works_count":47,"referenced_works":["https://openalex.org/W229097380","https://openalex.org/W1493586912","https://openalex.org/W1965267927","https://openalex.org/W1989080074","https://openalex.org/W2020257254","https://openalex.org/W2020541351","https://openalex.org/W2038622868","https://openalex.org/W2041877620","https://openalex.org/W2057000344","https://openalex.org/W2059699217","https://openalex.org/W2097794242","https://openalex.org/W2099922553","https://openalex.org/W2104262114","https://openalex.org/W2117131162","https://openalex.org/W2128016314","https://openalex.org/W2129795133","https://openalex.org/W2130410032","https://openalex.org/W2141781797","https://openalex.org/W2142890842","https://openalex.org/W2152121035","https://openalex.org/W2159675211","https://openalex.org/W2165446840","https://openalex.org/W2171322586","https://openalex.org/W2175370850","https://openalex.org/W2188035077","https://openalex.org/W2302501749","https://openalex.org/W2533355719","https://openalex.org/W2767743008","https://openalex.org/W2782454362","https://openalex.org/W2798055326","https://openalex.org/W2891678790","https://openalex.org/W2897121922","https://openalex.org/W2901027836","https://openalex.org/W2901144895","https://openalex.org/W2964315448","https://openalex.org/W2978955949","https://openalex.org/W2988126442","https://openalex.org/W2988716798","https://openalex.org/W3080500495","https://openalex.org/W3105512395","https://openalex.org/W3112376646","https://openalex.org/W3161482253","https://openalex.org/W3212334377","https://openalex.org/W4200181219","https://openalex.org/W4248318091","https://openalex.org/W4254188257","https://openalex.org/W6608852248"],"related_works":["https://openalex.org/W4391375266","https://openalex.org/W3123141149","https://openalex.org/W2751414885","https://openalex.org/W2369391311","https://openalex.org/W2910762661","https://openalex.org/W2373935109","https://openalex.org/W1606494531","https://openalex.org/W3025777772","https://openalex.org/W2144575440","https://openalex.org/W2034625591"],"abstract_inverted_index":{"Analysis":[0],"of":[1,26,36,91,152,155,173],"transcriptional":[2],"regulatory":[3,39,175],"interactions":[4,40,56,83],"and":[5,75,88,100,110,130,164,201,205],"their":[6],"comparisons":[7],"across":[8],"multiple":[9,58,181],"species":[10],"are":[11],"crucial":[12],"for":[13,57,98,178,191,196],"progress":[14],"in":[15,18,41,180],"various":[16],"fields":[17],"biology,":[19],"from":[20],"functional":[21],"genomics":[22],"to":[23,47,120,137,188],"the":[24,32,67,153,156,161,165],"evolution":[25],"signal":[27],"transduction":[28],"pathways.":[29],"However,":[30],"despite":[31],"rapidly":[33],"growing":[34],"body":[35],"data":[37,121,176,190,195],"on":[38,52,79,122,145],"several":[42,138],"eukaryotes,":[43],"no":[44],"databases":[45],"exist":[46],"provide":[48],"curated":[49],"high-quality":[50,189],"information":[51,78,144],"transcription":[53,80,92,123,131,146],"factor-target":[54,81,124],"gene":[55,82,125,197,207],"species.":[59],"Here,":[60],"we":[61],"address":[62],"this":[63],"gap":[64],"by":[65,112],"introducing":[66],"TFLink":[68,116,168],"gateway,":[69],"which":[70],"uniquely":[71],"provides":[72,117,170],"experimentally":[73],"explored":[74],"highly":[76],"accurate":[77,143],"(\u223c12":[84],"million),":[85],"nucleotide":[86],"sequences":[87],"genomic":[89],"locations":[90],"factor":[93,132],"binding":[94,133],"sites":[95],"(\u223c9":[96],"million)":[97],"human":[99],"six":[101],"model":[102],"organisms:":[103],"mouse,":[104],"rat,":[105],"zebrafish,":[106],"fruit":[107],"fly,":[108],"worm":[109],"yeast":[111],"integrating":[113],"10":[114],"resources.":[115],"user-friendly":[118],"access":[119,187],"interactions,":[126],"interactive":[127],"network":[128],"visualizations":[129],"sites,":[134],"with":[135,148],"cross-links":[136],"other":[139],"databases.":[140],"Besides":[141],"containing":[142],"factors,":[147],"a":[149,171],"clear":[150],"labelling":[151],"type/volume":[154],"experiments":[157],"(small-scale":[158],"or":[159],"high-throughput),":[160],"source":[162],"database":[163,184],"original":[166],"publications,":[167],"also":[169],"wealth":[172],"standardized":[174],"available":[177],"download":[179],"formats.":[182],"The":[183],"offers":[185],"easy":[186],"wet-lab":[192],"researchers,":[193],"supplies":[194],"set":[198],"enrichment":[199],"analyses":[200],"facilitates":[202],"systems":[203],"biology":[204],"comparative":[206],"regulation":[208],"studies.":[209],"Database":[210],"URL":[211],"https://tflink.net/.":[212]},"counts_by_year":[{"year":2026,"cited_by_count":26},{"year":2025,"cited_by_count":57},{"year":2024,"cited_by_count":45},{"year":2023,"cited_by_count":15}],"updated_date":"2026-05-09T13:55:54.758798","created_date":"2025-10-10T00:00:00"}
