{"id":"https://openalex.org/W4295424900","doi":"https://doi.org/10.1093/database/baac080","title":"COTTONOMICS: a comprehensive cotton multi-omics database","display_name":"COTTONOMICS: a comprehensive cotton multi-omics database","publication_year":2022,"publication_date":"2022-01-01","ids":{"openalex":"https://openalex.org/W4295424900","doi":"https://doi.org/10.1093/database/baac080","pmid":"https://pubmed.ncbi.nlm.nih.gov/36094905"},"language":"en","primary_location":{"id":"doi:10.1093/database/baac080","is_oa":true,"landing_page_url":"https://doi.org/10.1093/database/baac080","pdf_url":"https://academic.oup.com/database/article-pdf/doi/10.1093/database/baac080/45803733/baac080.pdf","source":{"id":"https://openalex.org/S4210201630","display_name":"Database","issn_l":"1758-0463","issn":["1758-0463"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311647","host_organization_name":"University of Oxford","host_organization_lineage":["https://openalex.org/P4310311647"],"host_organization_lineage_names":["University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Database","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://academic.oup.com/database/article-pdf/doi/10.1093/database/baac080/45803733/baac080.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5076146165","display_name":"Fan Dai","orcid":"https://orcid.org/0000-0003-3287-6798"},"institutions":[{"id":"https://openalex.org/I76130692","display_name":"Zhejiang University","ror":"https://ror.org/00a2xv884","country_code":"CN","type":"education","lineage":["https://openalex.org/I76130692"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Fan Dai","raw_affiliation_strings":["Zhejiang Provincial Key Laboratory of Crop Genetic Resources, Institute of Crop Science, Plant Precision Breeding Academy, College of Agriculture and Biotechnology, Zhejiang University , Hangzhou, Zhejiang 310058, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Zhejiang Provincial Key Laboratory of Crop Genetic Resources, Institute of Crop Science, Plant Precision Breeding Academy, College of Agriculture and Biotechnology, Zhejiang University , Hangzhou, Zhejiang 310058, China","institution_ids":["https://openalex.org/I76130692"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5033745445","display_name":"Jiedan Chen","orcid":"https://orcid.org/0000-0002-5223-8243"},"institutions":[{"id":"https://openalex.org/I4210149916","display_name":"Tea Research Institute","ror":"https://ror.org/056w1kd89","country_code":"CN","type":"facility","lineage":["https://openalex.org/I4210127390","https://openalex.org/I4210138501","https://openalex.org/I4210149916","https://openalex.org/I4210151987"]},{"id":"https://openalex.org/I76130692","display_name":"Zhejiang University","ror":"https://ror.org/00a2xv884","country_code":"CN","type":"education","lineage":["https://openalex.org/I76130692"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Jiedan Chen","raw_affiliation_strings":["Tea Research Institute, Chinese Academy of Agricultural Science , Hangzhou 310008, China","Zhejiang Provincial Key Laboratory of Crop Genetic Resources, Institute of Crop Science, Plant Precision Breeding Academy, College of Agriculture and Biotechnology, Zhejiang University , Hangzhou, Zhejiang 310058, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Tea Research Institute, Chinese Academy of Agricultural Science , Hangzhou 310008, China","institution_ids":["https://openalex.org/I4210149916"]},{"raw_affiliation_string":"Zhejiang Provincial Key Laboratory of Crop Genetic Resources, Institute of Crop Science, Plant Precision Breeding Academy, College of Agriculture and Biotechnology, Zhejiang University , Hangzhou, Zhejiang 310058, China","institution_ids":["https://openalex.org/I76130692"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5088477939","display_name":"Ziqian Zhang","orcid":"https://orcid.org/0000-0001-9294-660X"},"institutions":[{"id":"https://openalex.org/I76130692","display_name":"Zhejiang University","ror":"https://ror.org/00a2xv884","country_code":"CN","type":"education","lineage":["https://openalex.org/I76130692"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Ziqian Zhang","raw_affiliation_strings":["Zhejiang Provincial Key Laboratory of Crop Genetic Resources, Institute of Crop Science, Plant Precision Breeding Academy, College of Agriculture and Biotechnology, Zhejiang University , Hangzhou, Zhejiang 310058, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Zhejiang Provincial Key Laboratory of Crop Genetic Resources, Institute of Crop Science, Plant Precision Breeding Academy, College of Agriculture and Biotechnology, Zhejiang University , Hangzhou, Zhejiang 310058, China","institution_ids":["https://openalex.org/I76130692"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5000593660","display_name":"Fengjun Liu","orcid":null},"institutions":[{"id":"https://openalex.org/I76130692","display_name":"Zhejiang University","ror":"https://ror.org/00a2xv884","country_code":"CN","type":"education","lineage":["https://openalex.org/I76130692"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Fengjun Liu","raw_affiliation_strings":["Zhejiang Provincial Key Laboratory of Crop Genetic Resources, Institute of Crop Science, Plant Precision Breeding Academy, College of Agriculture and Biotechnology, Zhejiang University , Hangzhou, Zhejiang 310058, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Zhejiang Provincial Key Laboratory of Crop Genetic Resources, Institute of Crop Science, Plant Precision Breeding Academy, College of Agriculture and Biotechnology, Zhejiang University , Hangzhou, Zhejiang 310058, China","institution_ids":["https://openalex.org/I76130692"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100362067","display_name":"Jun Li","orcid":"https://orcid.org/0000-0003-2845-2351"},"institutions":[{"id":"https://openalex.org/I76130692","display_name":"Zhejiang University","ror":"https://ror.org/00a2xv884","country_code":"CN","type":"education","lineage":["https://openalex.org/I76130692"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Jun Li","raw_affiliation_strings":["Zhejiang Provincial Key Laboratory of Crop Genetic Resources, Institute of Crop Science, Plant Precision Breeding Academy, College of Agriculture and Biotechnology, Zhejiang University , Hangzhou, Zhejiang 310058, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Zhejiang Provincial Key Laboratory of Crop Genetic Resources, Institute of Crop Science, Plant Precision Breeding Academy, College of Agriculture and Biotechnology, Zhejiang University , Hangzhou, Zhejiang 310058, China","institution_ids":["https://openalex.org/I76130692"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5101980860","display_name":"Ting Zhao","orcid":"https://orcid.org/0000-0002-1452-5831"},"institutions":[{"id":"https://openalex.org/I76130692","display_name":"Zhejiang University","ror":"https://ror.org/00a2xv884","country_code":"CN","type":"education","lineage":["https://openalex.org/I76130692"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Ting Zhao","raw_affiliation_strings":["Zhejiang Provincial Key Laboratory of Crop Genetic Resources, Institute of Crop Science, Plant Precision Breeding Academy, College of Agriculture and Biotechnology, Zhejiang University , Hangzhou, Zhejiang 310058, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Zhejiang Provincial Key Laboratory of Crop Genetic Resources, Institute of Crop Science, Plant Precision Breeding Academy, College of Agriculture and Biotechnology, Zhejiang University , Hangzhou, Zhejiang 310058, China","institution_ids":["https://openalex.org/I76130692"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5101563897","display_name":"Yan Hu","orcid":"https://orcid.org/0000-0001-5434-7489"},"institutions":[{"id":"https://openalex.org/I76130692","display_name":"Zhejiang University","ror":"https://ror.org/00a2xv884","country_code":"CN","type":"education","lineage":["https://openalex.org/I76130692"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Yan Hu","raw_affiliation_strings":["Zhejiang Provincial Key Laboratory of Crop Genetic Resources, Institute of Crop Science, Plant Precision Breeding Academy, College of Agriculture and Biotechnology, Zhejiang University , Hangzhou, Zhejiang 310058, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Zhejiang Provincial Key Laboratory of Crop Genetic Resources, Institute of Crop Science, Plant Precision Breeding Academy, College of Agriculture and Biotechnology, Zhejiang University , Hangzhou, Zhejiang 310058, China","institution_ids":["https://openalex.org/I76130692"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5060498425","display_name":"Tianzhen Zhang","orcid":"https://orcid.org/0000-0001-7873-4547"},"institutions":[{"id":"https://openalex.org/I76130692","display_name":"Zhejiang University","ror":"https://ror.org/00a2xv884","country_code":"CN","type":"education","lineage":["https://openalex.org/I76130692"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Tianzhen Zhang","raw_affiliation_strings":["Zhejiang Provincial Key Laboratory of Crop Genetic Resources, Institute of Crop Science, Plant Precision Breeding Academy, College of Agriculture and Biotechnology, Zhejiang University , Hangzhou, Zhejiang 310058, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Zhejiang Provincial Key Laboratory of Crop Genetic Resources, Institute of Crop Science, Plant Precision Breeding Academy, College of Agriculture and Biotechnology, Zhejiang University , Hangzhou, Zhejiang 310058, China","institution_ids":["https://openalex.org/I76130692"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5053363846","display_name":"Lei Fang","orcid":"https://orcid.org/0000-0002-1546-7645"},"institutions":[{"id":"https://openalex.org/I76130692","display_name":"Zhejiang University","ror":"https://ror.org/00a2xv884","country_code":"CN","type":"education","lineage":["https://openalex.org/I76130692"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Lei Fang","raw_affiliation_strings":["Zhejiang Provincial Key Laboratory of Crop Genetic Resources, Institute of Crop Science, Plant Precision Breeding Academy, College of Agriculture and Biotechnology, Zhejiang University , Hangzhou, Zhejiang 310058, China"],"raw_orcid":"https://orcid.org/0000-0002-1546-7645","affiliations":[{"raw_affiliation_string":"Zhejiang Provincial Key Laboratory of Crop Genetic Resources, Institute of Crop Science, Plant Precision Breeding Academy, College of Agriculture and Biotechnology, Zhejiang University , Hangzhou, Zhejiang 310058, China","institution_ids":["https://openalex.org/I76130692"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":9,"corresponding_author_ids":["https://openalex.org/A5053363846","https://openalex.org/A5060498425"],"corresponding_institution_ids":["https://openalex.org/I76130692"],"apc_list":{"value":1415,"currency":"GBP","value_usd":1735},"apc_paid":{"value":1415,"currency":"GBP","value_usd":1735},"fwci":4.1995,"has_fulltext":false,"cited_by_count":26,"citation_normalized_percentile":{"value":0.93531216,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":96,"max":100},"biblio":{"volume":"2022","issue":null,"first_page":null,"last_page":null},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T12243","display_name":"Research in Cotton Cultivation","score":0.9990000128746033,"subfield":{"id":"https://openalex.org/subfields/1110","display_name":"Plant Science"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T12243","display_name":"Research in Cotton Cultivation","score":0.9990000128746033,"subfield":{"id":"https://openalex.org/subfields/1110","display_name":"Plant Science"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10494","display_name":"Plant Virus Research Studies","score":0.9610000252723694,"subfield":{"id":"https://openalex.org/subfields/1110","display_name":"Plant Science"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T13220","display_name":"Plant and Fungal Interactions Research","score":0.9401999711990356,"subfield":{"id":"https://openalex.org/subfields/1310","display_name":"Endocrinology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.6413229703903198},{"id":"https://openalex.org/keywords/indel","display_name":"Indel","score":0.5541877150535583},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.5072936415672302},{"id":"https://openalex.org/keywords/deep-sequencing","display_name":"Deep sequencing","score":0.5041266679763794},{"id":"https://openalex.org/keywords/genomics","display_name":"Genomics","score":0.496589720249176},{"id":"https://openalex.org/keywords/international-hapmap-project","display_name":"International HapMap Project","score":0.49227967858314514},{"id":"https://openalex.org/keywords/dna-sequencing","display_name":"DNA sequencing","score":0.48905953764915466},{"id":"https://openalex.org/keywords/genome-browser","display_name":"Genome browser","score":0.48093241453170776},{"id":"https://openalex.org/keywords/genome","display_name":"Genome","score":0.48030394315719604},{"id":"https://openalex.org/keywords/population","display_name":"Population","score":0.4785645306110382},{"id":"https://openalex.org/keywords/single-cell-sequencing","display_name":"Single cell sequencing","score":0.4498275816440582},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.44573286175727844},{"id":"https://openalex.org/keywords/epigenetics","display_name":"Epigenetics","score":0.4319066107273102},{"id":"https://openalex.org/keywords/rna-seq","display_name":"RNA-Seq","score":0.41634559631347656},{"id":"https://openalex.org/keywords/single-nucleotide-polymorphism","display_name":"Single-nucleotide polymorphism","score":0.3430594801902771},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.34285789728164673},{"id":"https://openalex.org/keywords/transcriptome","display_name":"Transcriptome","score":0.30019956827163696},{"id":"https://openalex.org/keywords/human-genome","display_name":"Human genome","score":0.22383186221122742},{"id":"https://openalex.org/keywords/exome-sequencing","display_name":"Exome sequencing","score":0.16473126411437988},{"id":"https://openalex.org/keywords/mutation","display_name":"Mutation","score":0.13476967811584473},{"id":"https://openalex.org/keywords/gene-expression","display_name":"Gene expression","score":0.11575821042060852},{"id":"https://openalex.org/keywords/genotype","display_name":"Genotype","score":0.07443791627883911}],"concepts":[{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.6413229703903198},{"id":"https://openalex.org/C119054055","wikidata":"https://www.wikidata.org/wiki/Q1576681","display_name":"Indel","level":5,"score":0.5541877150535583},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.5072936415672302},{"id":"https://openalex.org/C132917006","wikidata":"https://www.wikidata.org/wiki/Q5250436","display_name":"Deep sequencing","level":4,"score":0.5041266679763794},{"id":"https://openalex.org/C189206191","wikidata":"https://www.wikidata.org/wiki/Q222046","display_name":"Genomics","level":4,"score":0.496589720249176},{"id":"https://openalex.org/C177580304","wikidata":"https://www.wikidata.org/wiki/Q1147298","display_name":"International HapMap Project","level":5,"score":0.49227967858314514},{"id":"https://openalex.org/C51679486","wikidata":"https://www.wikidata.org/wiki/Q380546","display_name":"DNA sequencing","level":3,"score":0.48905953764915466},{"id":"https://openalex.org/C2781148417","wikidata":"https://www.wikidata.org/wiki/Q5533486","display_name":"Genome browser","level":5,"score":0.48093241453170776},{"id":"https://openalex.org/C141231307","wikidata":"https://www.wikidata.org/wiki/Q7020","display_name":"Genome","level":3,"score":0.48030394315719604},{"id":"https://openalex.org/C2908647359","wikidata":"https://www.wikidata.org/wiki/Q2625603","display_name":"Population","level":2,"score":0.4785645306110382},{"id":"https://openalex.org/C174749747","wikidata":"https://www.wikidata.org/wiki/Q15917269","display_name":"Single cell sequencing","level":5,"score":0.4498275816440582},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.44573286175727844},{"id":"https://openalex.org/C41091548","wikidata":"https://www.wikidata.org/wiki/Q26939","display_name":"Epigenetics","level":3,"score":0.4319066107273102},{"id":"https://openalex.org/C107397762","wikidata":"https://www.wikidata.org/wiki/Q2542347","display_name":"RNA-Seq","level":5,"score":0.41634559631347656},{"id":"https://openalex.org/C153209595","wikidata":"https://www.wikidata.org/wiki/Q501128","display_name":"Single-nucleotide polymorphism","level":4,"score":0.3430594801902771},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.34285789728164673},{"id":"https://openalex.org/C162317418","wikidata":"https://www.wikidata.org/wiki/Q252857","display_name":"Transcriptome","level":4,"score":0.30019956827163696},{"id":"https://openalex.org/C197077220","wikidata":"https://www.wikidata.org/wiki/Q720988","display_name":"Human genome","level":4,"score":0.22383186221122742},{"id":"https://openalex.org/C16671776","wikidata":"https://www.wikidata.org/wiki/Q5420592","display_name":"Exome sequencing","level":4,"score":0.16473126411437988},{"id":"https://openalex.org/C501734568","wikidata":"https://www.wikidata.org/wiki/Q42918","display_name":"Mutation","level":3,"score":0.13476967811584473},{"id":"https://openalex.org/C150194340","wikidata":"https://www.wikidata.org/wiki/Q26972","display_name":"Gene expression","level":3,"score":0.11575821042060852},{"id":"https://openalex.org/C135763542","wikidata":"https://www.wikidata.org/wiki/Q106016","display_name":"Genotype","level":3,"score":0.07443791627883911},{"id":"https://openalex.org/C144024400","wikidata":"https://www.wikidata.org/wiki/Q21201","display_name":"Sociology","level":0,"score":0.0},{"id":"https://openalex.org/C149923435","wikidata":"https://www.wikidata.org/wiki/Q37732","display_name":"Demography","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D000079803","descriptor_name":"Data Management","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000079803","descriptor_name":"Data Management","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000079803","descriptor_name":"Data Management","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D003851","descriptor_name":"Deoxyribonucleases","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003851","descriptor_name":"Deoxyribonucleases","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003851","descriptor_name":"Deoxyribonucleases","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012313","descriptor_name":"RNA","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012313","descriptor_name":"RNA","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012313","descriptor_name":"RNA","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D044127","descriptor_name":"Epigenesis, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D044127","descriptor_name":"Epigenesis, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D044127","descriptor_name":"Epigenesis, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D059014","descriptor_name":"High-Throughput Nucleotide Sequencing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D059014","descriptor_name":"High-Throughput Nucleotide Sequencing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D059014","descriptor_name":"High-Throughput Nucleotide Sequencing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":3,"locations":[{"id":"doi:10.1093/database/baac080","is_oa":true,"landing_page_url":"https://doi.org/10.1093/database/baac080","pdf_url":"https://academic.oup.com/database/article-pdf/doi/10.1093/database/baac080/45803733/baac080.pdf","source":{"id":"https://openalex.org/S4210201630","display_name":"Database","issn_l":"1758-0463","issn":["1758-0463"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311647","host_organization_name":"University of Oxford","host_organization_lineage":["https://openalex.org/P4310311647"],"host_organization_lineage_names":["University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Database","raw_type":"journal-article"},{"id":"pmid:36094905","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/36094905","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Database : the journal of biological databases and curation","raw_type":null},{"id":"pmh:oai:pubmedcentral.nih.gov:9467004","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/9467004","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Database (Oxford)","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1093/database/baac080","is_oa":true,"landing_page_url":"https://doi.org/10.1093/database/baac080","pdf_url":"https://academic.oup.com/database/article-pdf/doi/10.1093/database/baac080/45803733/baac080.pdf","source":{"id":"https://openalex.org/S4210201630","display_name":"Database","issn_l":"1758-0463","issn":["1758-0463"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311647","host_organization_name":"University of Oxford","host_organization_lineage":["https://openalex.org/P4310311647"],"host_organization_lineage_names":["University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Database","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G6212479103","display_name":null,"funder_award_id":"32172008","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"}],"funders":[{"id":"https://openalex.org/F4320321001","display_name":"National Natural Science Foundation of China","ror":"https://ror.org/01h0zpd94"}],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":38,"referenced_works":["https://openalex.org/W1966327575","https://openalex.org/W1976182511","https://openalex.org/W1982481323","https://openalex.org/W1984068087","https://openalex.org/W2001338440","https://openalex.org/W2004149738","https://openalex.org/W2036897871","https://openalex.org/W2093776734","https://openalex.org/W2104005232","https://openalex.org/W2119180969","https://openalex.org/W2130305733","https://openalex.org/W2131271579","https://openalex.org/W2131374955","https://openalex.org/W2133579817","https://openalex.org/W2133613866","https://openalex.org/W2140455347","https://openalex.org/W2142678478","https://openalex.org/W2170551349","https://openalex.org/W2202422562","https://openalex.org/W2263875137","https://openalex.org/W2325836491","https://openalex.org/W2529072821","https://openalex.org/W2529592713","https://openalex.org/W2559191318","https://openalex.org/W2594730553","https://openalex.org/W2621699315","https://openalex.org/W2622014095","https://openalex.org/W2765308146","https://openalex.org/W2790251212","https://openalex.org/W2800156222","https://openalex.org/W2800524954","https://openalex.org/W2898402099","https://openalex.org/W2900359059","https://openalex.org/W2921474111","https://openalex.org/W2951912016","https://openalex.org/W2964849163","https://openalex.org/W2982524423","https://openalex.org/W6646378327"],"related_works":["https://openalex.org/W2396424000","https://openalex.org/W2530589656","https://openalex.org/W2903793577","https://openalex.org/W4210751097","https://openalex.org/W3029136570","https://openalex.org/W2358011918","https://openalex.org/W2611792940","https://openalex.org/W2128684264","https://openalex.org/W3014425122","https://openalex.org/W4295424900"],"abstract_inverted_index":{"The":[0,166],"rapid":[1],"advancement":[2],"of":[3,21,44,56,65,96,173],"sequencing":[4,8,13,118,123,127],"technology,":[5],"including":[6,99],"next-generation":[7],"(NGS),":[9],"has":[10],"greatly":[11],"improved":[12],"efficiency":[14],"and":[15,24,33,48,53,110,125,137,150,152,161,179,195],"decreased":[16],"cost.":[17],"Consequently,":[18],"huge":[19],"amounts":[20],"genomic,":[22],"transcriptomic":[23],"epigenetic":[25,159],"data":[26,37,67,83,98,104,183],"concerning":[27,140],"cotton":[28,45,81,108,142,181,192],"species":[29],"have":[30],"been":[31],"generated":[32],"released.":[34],"These":[35],"large-scale":[36],"provide":[38],"immense":[39],"opportunities":[40],"for":[41,59,175],"the":[42,63,80,141],"study":[43],"genomic":[46,144],"structure":[47],"evolution,":[49],"population":[50,193],"genetic":[51],"diversity":[52],"genome-wide":[54],"mining":[55],"excellent":[57],"genes":[58,199],"important":[60],"traits.":[61,204],"However,":[62],"complexity":[64],"NGS":[66],"also":[68],"causes":[69],"distress,":[70],"as":[71],"it":[72],"cannot":[73],"be":[74],"utilized":[75],"easily.":[76],"Here,":[77],"we":[78],"presented":[79],"omics":[82,97],"platform":[84],"COTTONOMICS":[85,129],"(http://cotton.zju.edu.cn/),":[86],"an":[87],"easily":[88],"accessible":[89],"web":[90,168],"database":[91],"that":[92,200],"integrates":[93],"32.5":[94],"TB":[95],"seven":[100],"assembled":[101],"genomes,":[102,143],"resequencing":[103],"from":[105],"1180":[106],"allotetraploid":[107],"accessions":[109],"RNA-sequencing":[111,114],"(RNA-seq),":[112],"small":[113],"(smRNA-seq),":[115],"Chromatin":[116],"Immunoprecipitation":[117],"(ChIP-seq),":[119],"DNase":[120],"hypersensitive":[121],"sites":[122],"(DNase-seq)":[124],"Bisulfite":[126],"(BS-seq).":[128],"allows":[130],"users":[131,189],"to":[132,184,190],"employ":[133],"various":[134],"search":[135],"scenarios":[136],"retrieve":[138],"information":[139],"variation":[145],"(Single":[146],"nucleotide":[147],"polymorphisms":[148],"(SNPs)":[149],"Insertion":[151],"Deletion":[153],"(InDels)),":[154],"gene":[155],"expression,":[156,158],"smRNA":[157],"regulation":[160],"quantitative":[162],"trait":[163],"locus":[164],"(QTLs).":[165],"user-friendly":[167],"interface":[169],"offers":[170],"a":[171],"variety":[172],"modules":[174],"storing,":[176],"retrieving,":[177],"analyzing":[178],"visualizing":[180],"multi-omics":[182],"diverse":[185],"ends,":[186],"thereby":[187],"enabling":[188],"decipher":[191],"genetics":[194],"identify":[196],"potential":[197],"novel":[198],"influence":[201],"agronomically":[202],"beneficial":[203],"Database":[205],"URL:":[206],"http://cotton.zju.edu.cn.":[207]},"counts_by_year":[{"year":2026,"cited_by_count":6},{"year":2025,"cited_by_count":7},{"year":2024,"cited_by_count":7},{"year":2023,"cited_by_count":3},{"year":2022,"cited_by_count":3}],"updated_date":"2026-05-26T13:28:51.108037","created_date":"2025-10-10T00:00:00"}