{"id":"https://openalex.org/W4285744810","doi":"https://doi.org/10.1093/database/baac056","title":"A BERT-based ensemble learning approach for the BioCreative VII challenges: full-text chemical identification and multi-label classification in PubMed articles","display_name":"A BERT-based ensemble learning approach for the BioCreative VII challenges: full-text chemical identification and multi-label classification in PubMed articles","publication_year":2022,"publication_date":"2022-01-01","ids":{"openalex":"https://openalex.org/W4285744810","doi":"https://doi.org/10.1093/database/baac056","pmid":"https://pubmed.ncbi.nlm.nih.gov/35849027"},"language":"en","primary_location":{"id":"doi:10.1093/database/baac056","is_oa":true,"landing_page_url":"https://doi.org/10.1093/database/baac056","pdf_url":"https://academic.oup.com/database/article-pdf/doi/10.1093/database/baac056/44932579/baac056.pdf","source":{"id":"https://openalex.org/S4210201630","display_name":"Database","issn_l":"1758-0463","issn":["1758-0463"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311647","host_organization_name":"University of Oxford","host_organization_lineage":["https://openalex.org/P4310311647"],"host_organization_lineage_names":["University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Database","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://academic.oup.com/database/article-pdf/doi/10.1093/database/baac056/44932579/baac056.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5006471542","display_name":"Sheng-Jie Lin","orcid":null},"institutions":[{"id":"https://openalex.org/I47519274","display_name":"Taipei Medical University","ror":"https://ror.org/05031qk94","country_code":"TW","type":"education","lineage":["https://openalex.org/I47519274"]}],"countries":["TW"],"is_corresponding":false,"raw_author_name":"Sheng-Jie Lin","raw_affiliation_strings":["Graduate Institute of Data Science, Taipei Medical University, No. 172-1, Section 2, Keelung Rd, D\u00e1an District , Taipei City 106, Taiwan"],"affiliations":[{"raw_affiliation_string":"Graduate Institute of Data Science, Taipei Medical University, No. 172-1, Section 2, Keelung Rd, D\u00e1an District , Taipei City 106, Taiwan","institution_ids":["https://openalex.org/I47519274"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5035910093","display_name":"Wen-Chao Yeh","orcid":"https://orcid.org/0000-0002-5227-0120"},"institutions":[{"id":"https://openalex.org/I25846049","display_name":"National Tsing Hua University","ror":"https://ror.org/00zdnkx70","country_code":"TW","type":"education","lineage":["https://openalex.org/I25846049"]}],"countries":["TW"],"is_corresponding":false,"raw_author_name":"Wen-Chao Yeh","raw_affiliation_strings":["Institute of Information Systems and Applications, National Tsing Hua University, No. 101, Section 2, Guangfu Rd, East District , Hsinchu City 300, Taiwan"],"affiliations":[{"raw_affiliation_string":"Institute of Information Systems and Applications, National Tsing Hua University, No. 101, Section 2, Guangfu Rd, East District , Hsinchu City 300, Taiwan","institution_ids":["https://openalex.org/I25846049"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5000638009","display_name":"Yu-Wen Chiu","orcid":"https://orcid.org/0000-0003-4121-3929"},"institutions":[{"id":"https://openalex.org/I47519274","display_name":"Taipei Medical University","ror":"https://ror.org/05031qk94","country_code":"TW","type":"education","lineage":["https://openalex.org/I47519274"]}],"countries":["TW"],"is_corresponding":false,"raw_author_name":"Yu-Wen Chiu","raw_affiliation_strings":["Graduate Institute of Data Science, Taipei Medical University, No. 172-1, Section 2, Keelung Rd, D\u00e1an District , Taipei City 106, Taiwan"],"affiliations":[{"raw_affiliation_string":"Graduate Institute of Data Science, Taipei Medical University, No. 172-1, Section 2, Keelung Rd, D\u00e1an District , Taipei City 106, Taiwan","institution_ids":["https://openalex.org/I47519274"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5018928362","display_name":"Yung\u2010Chun Chang","orcid":"https://orcid.org/0000-0002-9634-8380"},"institutions":[{"id":"https://openalex.org/I2802331550","display_name":"Taipei Medical University Hospital","ror":"https://ror.org/03k0md330","country_code":"TW","type":"healthcare","lineage":["https://openalex.org/I2802331550"]},{"id":"https://openalex.org/I4210128167","display_name":"National Science and Technology Council","ror":"https://ror.org/02kv4zf79","country_code":"TW","type":"government","lineage":["https://openalex.org/I4210128167"]},{"id":"https://openalex.org/I47519274","display_name":"Taipei Medical University","ror":"https://ror.org/05031qk94","country_code":"TW","type":"education","lineage":["https://openalex.org/I47519274"]}],"countries":["TW"],"is_corresponding":true,"raw_author_name":"Yung-Chun Chang","raw_affiliation_strings":["Clinical Big Data Research Center, Taipei Medical University Hospital, No. 172-1, Section 2, Keelung Rd, D\u00e1an District , Taipei City 106, Taiwan","Graduate Institute of Data Science, Taipei Medical University, No. 172-1, Section 2, Keelung Rd, D\u00e1an District , Taipei City 106, Taiwan","Pervasive AI Research Labs, Ministry of Science and Technology, No. 1001, Daxue Rd, East District , Hsinchu City 300, Taiwan"],"affiliations":[{"raw_affiliation_string":"Clinical Big Data Research Center, Taipei Medical University Hospital, No. 172-1, Section 2, Keelung Rd, D\u00e1an District , Taipei City 106, Taiwan","institution_ids":["https://openalex.org/I2802331550"]},{"raw_affiliation_string":"Graduate Institute of Data Science, Taipei Medical University, No. 172-1, Section 2, Keelung Rd, D\u00e1an District , Taipei City 106, Taiwan","institution_ids":["https://openalex.org/I47519274"]},{"raw_affiliation_string":"Pervasive AI Research Labs, Ministry of Science and Technology, No. 1001, Daxue Rd, East District , Hsinchu City 300, Taiwan","institution_ids":["https://openalex.org/I4210128167"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5053967430","display_name":"Min\u2010Huei Hsu","orcid":"https://orcid.org/0000-0003-0383-4302"},"institutions":[{"id":"https://openalex.org/I47519274","display_name":"Taipei Medical University","ror":"https://ror.org/05031qk94","country_code":"TW","type":"education","lineage":["https://openalex.org/I47519274"]}],"countries":["TW"],"is_corresponding":false,"raw_author_name":"Min-Huei Hsu","raw_affiliation_strings":["Graduate Institute of Data Science, Taipei Medical University, No. 172-1, Section 2, Keelung Rd, D\u00e1an District , Taipei City 106, Taiwan"],"affiliations":[{"raw_affiliation_string":"Graduate Institute of Data Science, Taipei Medical University, No. 172-1, Section 2, Keelung Rd, D\u00e1an District , Taipei City 106, Taiwan","institution_ids":["https://openalex.org/I47519274"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5040265580","display_name":"Yi-Shin Chen","orcid":"https://orcid.org/0000-0002-8087-9670"},"institutions":[{"id":"https://openalex.org/I25846049","display_name":"National Tsing Hua University","ror":"https://ror.org/00zdnkx70","country_code":"TW","type":"education","lineage":["https://openalex.org/I25846049"]}],"countries":["TW"],"is_corresponding":false,"raw_author_name":"Yi-Shin Chen","raw_affiliation_strings":["Institute of Information Systems and Applications, National Tsing Hua University, No. 101, Section 2, Guangfu Rd, East District , Hsinchu City 300, Taiwan"],"affiliations":[{"raw_affiliation_string":"Institute of Information Systems and Applications, National Tsing Hua University, No. 101, Section 2, Guangfu Rd, East District , Hsinchu City 300, Taiwan","institution_ids":["https://openalex.org/I25846049"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5119558606","display_name":"Wen\u2212Lian Hsu","orcid":"https://orcid.org/0000-0001-7061-3513"},"institutions":[{"id":"https://openalex.org/I143578492","display_name":"Asia University","ror":"https://ror.org/038a1tp19","country_code":"TW","type":"education","lineage":["https://openalex.org/I143578492"]},{"id":"https://openalex.org/I4210128167","display_name":"National Science and Technology Council","ror":"https://ror.org/02kv4zf79","country_code":"TW","type":"government","lineage":["https://openalex.org/I4210128167"]}],"countries":["TW"],"is_corresponding":false,"raw_author_name":"Wen-Lian Hsu","raw_affiliation_strings":["Department of Computer Science and Information Engineering, Asia University, No. 500, Liufeng Rd, Wufeng District , Taichung City 413, Taiwan","Pervasive AI Research Labs, Ministry of Science and Technology, No. 1001, Daxue Rd, East District , Hsinchu City 300, Taiwan"],"affiliations":[{"raw_affiliation_string":"Department of Computer Science and Information Engineering, Asia University, No. 500, Liufeng Rd, Wufeng District , Taichung City 413, Taiwan","institution_ids":["https://openalex.org/I143578492"]},{"raw_affiliation_string":"Pervasive AI Research Labs, Ministry of Science and Technology, No. 1001, Daxue Rd, East District , Hsinchu City 300, Taiwan","institution_ids":["https://openalex.org/I4210128167"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":7,"corresponding_author_ids":["https://openalex.org/A5018928362"],"corresponding_institution_ids":["https://openalex.org/I2802331550","https://openalex.org/I4210128167","https://openalex.org/I47519274"],"apc_list":{"value":1415,"currency":"GBP","value_usd":1735},"apc_paid":{"value":1415,"currency":"GBP","value_usd":1735},"fwci":0.6076,"has_fulltext":true,"cited_by_count":8,"citation_normalized_percentile":{"value":0.64207517,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":90,"max":98},"biblio":{"volume":"2022","issue":null,"first_page":null,"last_page":null},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9986000061035156,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9986000061035156,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T13083","display_name":"Advanced Text Analysis Techniques","score":0.9976000189781189,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10028","display_name":"Topic Modeling","score":0.9975000023841858,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.797797679901123},{"id":"https://openalex.org/keywords/identifier","display_name":"Identifier","score":0.6929931044578552},{"id":"https://openalex.org/keywords/normalization","display_name":"Normalization (sociology)","score":0.6527465581893921},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.5972303152084351},{"id":"https://openalex.org/keywords/encoder","display_name":"Encoder","score":0.5764346122741699},{"id":"https://openalex.org/keywords/natural-language-processing","display_name":"Natural language processing","score":0.4804939031600952},{"id":"https://openalex.org/keywords/identification","display_name":"Identification (biology)","score":0.43699318170547485},{"id":"https://openalex.org/keywords/machine-learning","display_name":"Machine learning","score":0.3815464973449707},{"id":"https://openalex.org/keywords/information-retrieval","display_name":"Information retrieval","score":0.3413541316986084}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.797797679901123},{"id":"https://openalex.org/C154504017","wikidata":"https://www.wikidata.org/wiki/Q853614","display_name":"Identifier","level":2,"score":0.6929931044578552},{"id":"https://openalex.org/C136886441","wikidata":"https://www.wikidata.org/wiki/Q926129","display_name":"Normalization (sociology)","level":2,"score":0.6527465581893921},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.5972303152084351},{"id":"https://openalex.org/C118505674","wikidata":"https://www.wikidata.org/wiki/Q42586063","display_name":"Encoder","level":2,"score":0.5764346122741699},{"id":"https://openalex.org/C204321447","wikidata":"https://www.wikidata.org/wiki/Q30642","display_name":"Natural language processing","level":1,"score":0.4804939031600952},{"id":"https://openalex.org/C116834253","wikidata":"https://www.wikidata.org/wiki/Q2039217","display_name":"Identification (biology)","level":2,"score":0.43699318170547485},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.3815464973449707},{"id":"https://openalex.org/C23123220","wikidata":"https://www.wikidata.org/wiki/Q816826","display_name":"Information retrieval","level":1,"score":0.3413541316986084},{"id":"https://openalex.org/C59822182","wikidata":"https://www.wikidata.org/wiki/Q441","display_name":"Botany","level":1,"score":0.0},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.0},{"id":"https://openalex.org/C19165224","wikidata":"https://www.wikidata.org/wiki/Q23404","display_name":"Anthropology","level":1,"score":0.0},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.0},{"id":"https://openalex.org/C144024400","wikidata":"https://www.wikidata.org/wiki/Q21201","display_name":"Sociology","level":0,"score":0.0},{"id":"https://openalex.org/C111919701","wikidata":"https://www.wikidata.org/wiki/Q9135","display_name":"Operating system","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D000069550","descriptor_name":"Machine Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000069550","descriptor_name":"Machine Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000069550","descriptor_name":"Machine Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000069550","descriptor_name":"Machine Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000086382","descriptor_name":"COVID-19","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000086382","descriptor_name":"COVID-19","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000086382","descriptor_name":"COVID-19","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000086382","descriptor_name":"COVID-19","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D039781","descriptor_name":"PubMed","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D039781","descriptor_name":"PubMed","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D039781","descriptor_name":"PubMed","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D039781","descriptor_name":"PubMed","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D046650","descriptor_name":"Medical Subject Headings","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D046650","descriptor_name":"Medical Subject Headings","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D046650","descriptor_name":"Medical Subject Headings","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D046650","descriptor_name":"Medical Subject Headings","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D057225","descriptor_name":"Data Mining","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D057225","descriptor_name":"Data Mining","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D057225","descriptor_name":"Data Mining","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D057225","descriptor_name":"Data Mining","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true}],"locations_count":3,"locations":[{"id":"doi:10.1093/database/baac056","is_oa":true,"landing_page_url":"https://doi.org/10.1093/database/baac056","pdf_url":"https://academic.oup.com/database/article-pdf/doi/10.1093/database/baac056/44932579/baac056.pdf","source":{"id":"https://openalex.org/S4210201630","display_name":"Database","issn_l":"1758-0463","issn":["1758-0463"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311647","host_organization_name":"University of Oxford","host_organization_lineage":["https://openalex.org/P4310311647"],"host_organization_lineage_names":["University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Database","raw_type":"journal-article"},{"id":"pmid:35849027","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/35849027","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Database : the journal of biological databases and curation","raw_type":null},{"id":"pmh:oai:pubmedcentral.nih.gov:9290865","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/9290865","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Database (Oxford)","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1093/database/baac056","is_oa":true,"landing_page_url":"https://doi.org/10.1093/database/baac056","pdf_url":"https://academic.oup.com/database/article-pdf/doi/10.1093/database/baac056/44932579/baac056.pdf","source":{"id":"https://openalex.org/S4210201630","display_name":"Database","issn_l":"1758-0463","issn":["1758-0463"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311647","host_organization_name":"University of Oxford","host_organization_lineage":["https://openalex.org/P4310311647"],"host_organization_lineage_names":["University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Database","raw_type":"journal-article"},"sustainable_development_goals":[{"score":0.49000000953674316,"display_name":"Quality Education","id":"https://metadata.un.org/sdg/4"}],"awards":[{"id":"https://openalex.org/G1365840611","display_name":null,"funder_award_id":"110-2634-F-A49-004","funder_id":"https://openalex.org/F4320322795","funder_display_name":"Ministry of Science and Technology, Taiwan"},{"id":"https://openalex.org/G2205640134","display_name":null,"funder_award_id":"MOST 109","funder_id":"https://openalex.org/F4320322795","funder_display_name":"Ministry of Science and Technology, Taiwan"},{"id":"https://openalex.org/G3365722850","display_name":null,"funder_award_id":"MOST 10","funder_id":"https://openalex.org/F4320322795","funder_display_name":"Ministry of Science and Technology, Taiwan"},{"id":"https://openalex.org/G361372759","display_name":null,"funder_award_id":"110-26","funder_id":"https://openalex.org/F4320322795","funder_display_name":"Ministry of Science and Technology, Taiwan"},{"id":"https://openalex.org/G3661406476","display_name":null,"funder_award_id":"109-2410-H-038-012-MY2","funder_id":"https://openalex.org/F4320322795","funder_display_name":"Ministry of Science and Technology, Taiwan"},{"id":"https://openalex.org/G3739253764","display_name":null,"funder_award_id":"MOST 110-2634-F-A49-004","funder_id":"https://openalex.org/F4320322795","funder_display_name":"Ministry of Science and Technology, Taiwan"},{"id":"https://openalex.org/G3862518167","display_name":null,"funder_award_id":"MOST 109-","funder_id":"https://openalex.org/F4320322795","funder_display_name":"Ministry of Science and Technology, Taiwan"},{"id":"https://openalex.org/G7160539585","display_name":null,"funder_award_id":"Technology","funder_id":"https://openalex.org/F4320322795","funder_display_name":"Ministry of Science and Technology, Taiwan"},{"id":"https://openalex.org/G8767728853","display_name":null,"funder_award_id":"MOST 109-2410-H-038-012-MY2","funder_id":"https://openalex.org/F4320322795","funder_display_name":"Ministry of Science and Technology, Taiwan"}],"funders":[{"id":"https://openalex.org/F4320322795","display_name":"Ministry of Science and Technology, Taiwan","ror":"https://ror.org/02kv4zf79"}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W4285744810.pdf","grobid_xml":"https://content.openalex.org/works/W4285744810.grobid-xml"},"referenced_works_count":61,"referenced_works":["https://openalex.org/W40563694","https://openalex.org/W1574901103","https://openalex.org/W1647671624","https://openalex.org/W1663587272","https://openalex.org/W2114315281","https://openalex.org/W2154142897","https://openalex.org/W2335791510","https://openalex.org/W2341742436","https://openalex.org/W2346452181","https://openalex.org/W2472357683","https://openalex.org/W2512456704","https://openalex.org/W2525778437","https://openalex.org/W2604372572","https://openalex.org/W2766417776","https://openalex.org/W2896457183","https://openalex.org/W2897093986","https://openalex.org/W2900758626","https://openalex.org/W2904867915","https://openalex.org/W2908510526","https://openalex.org/W2911489562","https://openalex.org/W2964341631","https://openalex.org/W2971258845","https://openalex.org/W2996428491","https://openalex.org/W3006948250","https://openalex.org/W3009431628","https://openalex.org/W3025941903","https://openalex.org/W3041474538","https://openalex.org/W3046375318","https://openalex.org/W3097438085","https://openalex.org/W3105753785","https://openalex.org/W3125937743","https://openalex.org/W3161987470","https://openalex.org/W3163314873","https://openalex.org/W3166204619","https://openalex.org/W3175170601","https://openalex.org/W3199318857","https://openalex.org/W3217527629","https://openalex.org/W4210800588","https://openalex.org/W4224325974","https://openalex.org/W4287824654","https://openalex.org/W4385245566","https://openalex.org/W6636808696","https://openalex.org/W6636915900","https://openalex.org/W6704842505","https://openalex.org/W6727690538","https://openalex.org/W6739901393","https://openalex.org/W6755207826","https://openalex.org/W6755810037","https://openalex.org/W6757817989","https://openalex.org/W6768021236","https://openalex.org/W6771917389","https://openalex.org/W6774338567","https://openalex.org/W6780521158","https://openalex.org/W6781031682","https://openalex.org/W6790852916","https://openalex.org/W6795688271","https://openalex.org/W6795689899","https://openalex.org/W6801208739","https://openalex.org/W6804938495","https://openalex.org/W6808072049","https://openalex.org/W6947727497"],"related_works":["https://openalex.org/W4378651134","https://openalex.org/W4252684102","https://openalex.org/W2608983118","https://openalex.org/W2591697403","https://openalex.org/W2352307597","https://openalex.org/W1979633005","https://openalex.org/W2163724607","https://openalex.org/W3135403405","https://openalex.org/W2023227762","https://openalex.org/W1980092392"],"abstract_inverted_index":{"In":[0],"this":[1],"research,":[2],"we":[3],"explored":[4],"various":[5,46],"state-of-the-art":[6,136],"biomedical-specific":[7],"pre-trained":[8],"Bidirectional":[9],"Encoder":[10],"Representations":[11],"from":[12],"Transformers":[13],"(BERT)":[14],"models":[15,47],"for":[16],"the":[17,30,43,50,57,81,110,113,123,131,139],"National":[18],"Library":[19],"of":[20,45,56,70,100],"Medicine":[21],"-":[22],"Chemistry":[23],"(NLM":[24],"CHEM)":[25],"and":[26,34,72,76,106,134],"LitCovid":[27,111,140],"tracks":[28],"in":[29,74,93,103,119,122,138],"BioCreative":[31],"VII":[32],"Challenge,":[33],"propose":[35],"a":[36,98],"BERT-based":[37],"ensemble":[38],"learning":[39],"approach":[40],"to":[41,48],"integrate":[42],"advantages":[44],"improve":[49],"system's":[51],"performance.":[52],"The":[53],"experimental":[54],"results":[55],"NLM-CHEM":[58],"track":[59],"demonstrate":[60],"that":[61],"our":[62],"method":[63,115],"can":[64],"achieve":[65,135],"remarkable":[66],"performance,":[67],"with":[68],"F1-scores":[69],"85%":[71],"91.8%":[73],"strict":[75,105],"approximate":[77,107],"evaluations,":[78],"respectively.":[79],"Moreover,":[80],"proposed":[82,114],"Medical":[83],"Subject":[84],"Headings":[85],"identifier":[86],"(MeSH":[87],"ID)":[88],"normalization":[89],"algorithm":[90],"is":[91,116],"effective":[92,118],"entity":[94],"normalization,":[95],"which":[96,129],"achieved":[97],"F1-score":[99],"about":[101],"80%":[102],"both":[104],"evaluations.":[108],"For":[109],"track,":[112],"also":[117],"detecting":[120],"topics":[121],"Coronavirus":[124],"disease":[125],"2019":[126],"(COVID-19)":[127],"literature,":[128],"outperformed":[130],"compared":[132],"methods":[133],"performance":[137],"corpus.":[141],"Database":[142],"URL:":[143],"https://www.ncbi.nlm.nih.gov/research/coronavirus/.":[144]},"counts_by_year":[{"year":2026,"cited_by_count":1},{"year":2025,"cited_by_count":1},{"year":2024,"cited_by_count":5},{"year":2023,"cited_by_count":1}],"updated_date":"2026-04-10T15:06:20.359241","created_date":"2025-10-10T00:00:00"}
