{"id":"https://openalex.org/W4214898534","doi":"https://doi.org/10.1093/database/baac017","title":"hCoronavirusesDB: an integrated bioinformatics resource for human coronaviruses","display_name":"hCoronavirusesDB: an integrated bioinformatics resource for human coronaviruses","publication_year":2022,"publication_date":"2022-01-01","ids":{"openalex":"https://openalex.org/W4214898534","doi":"https://doi.org/10.1093/database/baac017","pmid":"https://pubmed.ncbi.nlm.nih.gov/35348639"},"language":"en","primary_location":{"id":"doi:10.1093/database/baac017","is_oa":true,"landing_page_url":"https://doi.org/10.1093/database/baac017","pdf_url":"https://academic.oup.com/database/article-pdf/doi/10.1093/database/baac017/43056843/baac017.pdf","source":{"id":"https://openalex.org/S4210201630","display_name":"Database","issn_l":"1758-0463","issn":["1758-0463"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311647","host_organization_name":"University of Oxford","host_organization_lineage":["https://openalex.org/P4310311647"],"host_organization_lineage_names":["University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Database","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://academic.oup.com/database/article-pdf/doi/10.1093/database/baac017/43056843/baac017.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5003598926","display_name":"Iman Almansour","orcid":"https://orcid.org/0000-0001-8193-9797"},"institutions":[{"id":"https://openalex.org/I76571253","display_name":"Imam Abdulrahman Bin Faisal University","ror":"https://ror.org/038cy8j79","country_code":"SA","type":"education","lineage":["https://openalex.org/I76571253"]}],"countries":["SA"],"is_corresponding":true,"raw_author_name":"Iman Almansour","raw_affiliation_strings":["Department of Epidemic Diseases Research, Institute for Research and Medical Consultations (IRMC), Imam Abdulrahman Bin Faisal University, P.O. Box 1982, Dammam 31441, Saudi Arabia"],"raw_orcid":"https://orcid.org/0000-0001-8193-9797","affiliations":[{"raw_affiliation_string":"Department of Epidemic Diseases Research, Institute for Research and Medical Consultations (IRMC), Imam Abdulrahman Bin Faisal University, P.O. Box 1982, Dammam 31441, Saudi Arabia","institution_ids":["https://openalex.org/I76571253"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5007244041","display_name":"Imane Boudellioua","orcid":null},"institutions":[{"id":"https://openalex.org/I134085113","display_name":"King Fahd University of Petroleum and Minerals","ror":"https://ror.org/03yez3163","country_code":"SA","type":"education","lineage":["https://openalex.org/I134085113"]}],"countries":["SA"],"is_corresponding":false,"raw_author_name":"Imane Boudellioua","raw_affiliation_strings":["Information and Computer Science Department, King Fahd University of Petroleum and Minerals, P.O. Box 2205, Dhahran 31261, Saudi Arabia"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Information and Computer Science Department, King Fahd University of Petroleum and Minerals, P.O. Box 2205, Dhahran 31261, Saudi Arabia","institution_ids":["https://openalex.org/I134085113"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":2,"corresponding_author_ids":["https://openalex.org/A5003598926"],"corresponding_institution_ids":["https://openalex.org/I76571253"],"apc_list":{"value":1415,"currency":"GBP","value_usd":1735},"apc_paid":{"value":1415,"currency":"GBP","value_usd":1735},"fwci":0.4037,"has_fulltext":false,"cited_by_count":5,"citation_normalized_percentile":{"value":0.58677472,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":90,"max":98},"biblio":{"volume":"2022","issue":null,"first_page":null,"last_page":null},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10118","display_name":"SARS-CoV-2 and COVID-19 Research","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/2725","display_name":"Infectious Diseases"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},"topics":[{"id":"https://openalex.org/T10118","display_name":"SARS-CoV-2 and COVID-19 Research","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/2725","display_name":"Infectious Diseases"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T12576","display_name":"vaccines and immunoinformatics approaches","score":0.9986000061035156,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11495","display_name":"Animal Virus Infections Studies","score":0.996999979019165,"subfield":{"id":"https://openalex.org/subfields/1103","display_name":"Animal Science and Zoology"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/coronavirus","display_name":"Coronavirus","score":0.666570782661438},{"id":"https://openalex.org/keywords/pandemic","display_name":"Pandemic","score":0.5618743896484375},{"id":"https://openalex.org/keywords/middle-east-respiratory-syndrome","display_name":"Middle East respiratory syndrome","score":0.5260553359985352},{"id":"https://openalex.org/keywords/virology","display_name":"Virology","score":0.4866662621498108},{"id":"https://openalex.org/keywords/middle-east-respiratory-syndrome-coronavirus","display_name":"Middle East respiratory syndrome coronavirus","score":0.45391398668289185},{"id":"https://openalex.org/keywords/analytics","display_name":"Analytics","score":0.45325547456741333},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.44803640246391296},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.4399332106113434},{"id":"https://openalex.org/keywords/database","display_name":"Database","score":0.40503063797950745},{"id":"https://openalex.org/keywords/coronavirus-disease-2019","display_name":"Coronavirus disease 2019 (COVID-19)","score":0.3906068205833435},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.32062166929244995},{"id":"https://openalex.org/keywords/medicine","display_name":"Medicine","score":0.18447619676589966},{"id":"https://openalex.org/keywords/disease","display_name":"Disease","score":0.08645999431610107},{"id":"https://openalex.org/keywords/infectious-disease","display_name":"Infectious disease (medical specialty)","score":0.06880724430084229}],"concepts":[{"id":"https://openalex.org/C2777648638","wikidata":"https://www.wikidata.org/wiki/Q57751738","display_name":"Coronavirus","level":5,"score":0.666570782661438},{"id":"https://openalex.org/C89623803","wikidata":"https://www.wikidata.org/wiki/Q12184","display_name":"Pandemic","level":5,"score":0.5618743896484375},{"id":"https://openalex.org/C2776525042","wikidata":"https://www.wikidata.org/wiki/Q16654806","display_name":"Middle East respiratory syndrome","level":5,"score":0.5260553359985352},{"id":"https://openalex.org/C159047783","wikidata":"https://www.wikidata.org/wiki/Q7215","display_name":"Virology","level":1,"score":0.4866662621498108},{"id":"https://openalex.org/C2777691041","wikidata":"https://www.wikidata.org/wiki/Q4902157","display_name":"Middle East respiratory syndrome coronavirus","level":5,"score":0.45391398668289185},{"id":"https://openalex.org/C79158427","wikidata":"https://www.wikidata.org/wiki/Q485396","display_name":"Analytics","level":2,"score":0.45325547456741333},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.44803640246391296},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.4399332106113434},{"id":"https://openalex.org/C77088390","wikidata":"https://www.wikidata.org/wiki/Q8513","display_name":"Database","level":1,"score":0.40503063797950745},{"id":"https://openalex.org/C3008058167","wikidata":"https://www.wikidata.org/wiki/Q84263196","display_name":"Coronavirus disease 2019 (COVID-19)","level":4,"score":0.3906068205833435},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.32062166929244995},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.18447619676589966},{"id":"https://openalex.org/C2779134260","wikidata":"https://www.wikidata.org/wiki/Q12136","display_name":"Disease","level":2,"score":0.08645999431610107},{"id":"https://openalex.org/C524204448","wikidata":"https://www.wikidata.org/wiki/Q788926","display_name":"Infectious disease (medical specialty)","level":3,"score":0.06880724430084229},{"id":"https://openalex.org/C142724271","wikidata":"https://www.wikidata.org/wiki/Q7208","display_name":"Pathology","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D000086382","descriptor_name":"COVID-19","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D000086382","descriptor_name":"COVID-19","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D000086382","descriptor_name":"COVID-19","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D000086382","descriptor_name":"COVID-19","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D000086402","descriptor_name":"SARS-CoV-2","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D000086402","descriptor_name":"SARS-CoV-2","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D000086402","descriptor_name":"SARS-CoV-2","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D000086402","descriptor_name":"SARS-CoV-2","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D058873","descriptor_name":"Pandemics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D058873","descriptor_name":"Pandemics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D058873","descriptor_name":"Pandemics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D058873","descriptor_name":"Pandemics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D065207","descriptor_name":"Middle East Respiratory Syndrome Coronavirus","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D065207","descriptor_name":"Middle East Respiratory Syndrome Coronavirus","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D065207","descriptor_name":"Middle East Respiratory Syndrome Coronavirus","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D065207","descriptor_name":"Middle East Respiratory Syndrome Coronavirus","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true}],"locations_count":3,"locations":[{"id":"doi:10.1093/database/baac017","is_oa":true,"landing_page_url":"https://doi.org/10.1093/database/baac017","pdf_url":"https://academic.oup.com/database/article-pdf/doi/10.1093/database/baac017/43056843/baac017.pdf","source":{"id":"https://openalex.org/S4210201630","display_name":"Database","issn_l":"1758-0463","issn":["1758-0463"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311647","host_organization_name":"University of Oxford","host_organization_lineage":["https://openalex.org/P4310311647"],"host_organization_lineage_names":["University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Database","raw_type":"journal-article"},{"id":"pmid:35348639","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/35348639","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Database : the journal of biological databases and curation","raw_type":null},{"id":"pmh:oai:pubmedcentral.nih.gov:9216473","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/9216473","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Database (Oxford)","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1093/database/baac017","is_oa":true,"landing_page_url":"https://doi.org/10.1093/database/baac017","pdf_url":"https://academic.oup.com/database/article-pdf/doi/10.1093/database/baac017/43056843/baac017.pdf","source":{"id":"https://openalex.org/S4210201630","display_name":"Database","issn_l":"1758-0463","issn":["1758-0463"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311647","host_organization_name":"University of Oxford","host_organization_lineage":["https://openalex.org/P4310311647"],"host_organization_lineage_names":["University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Database","raw_type":"journal-article"},"sustainable_development_goals":[{"display_name":"Good health and well-being","score":0.75,"id":"https://metadata.un.org/sdg/3"}],"awards":[{"id":"https://openalex.org/G1237669410","display_name":null,"funder_award_id":"5-20-01-070-0014","funder_id":"https://openalex.org/F4320322997","funder_display_name":"King Abdulaziz City for Science and Technology"}],"funders":[{"id":"https://openalex.org/F4320322997","display_name":"King Abdulaziz City for Science and Technology","ror":"https://ror.org/05tdz6m39"}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W4214898534.pdf","grobid_xml":"https://content.openalex.org/works/W4214898534.grobid-xml"},"referenced_works_count":27,"referenced_works":["https://openalex.org/W10914455","https://openalex.org/W2114850508","https://openalex.org/W2127322768","https://openalex.org/W2142678478","https://openalex.org/W2162171603","https://openalex.org/W2470646526","https://openalex.org/W2605343262","https://openalex.org/W2750791471","https://openalex.org/W2898389621","https://openalex.org/W2952045272","https://openalex.org/W2963917375","https://openalex.org/W2967528950","https://openalex.org/W3001897055","https://openalex.org/W3002659854","https://openalex.org/W3004280078","https://openalex.org/W3004318991","https://openalex.org/W3006290567","https://openalex.org/W3007866917","https://openalex.org/W3119865653","https://openalex.org/W3123175540","https://openalex.org/W3127077122","https://openalex.org/W3147610910","https://openalex.org/W3157316185","https://openalex.org/W3190039079","https://openalex.org/W4211029266","https://openalex.org/W4231903660","https://openalex.org/W6773389672"],"related_works":["https://openalex.org/W2580529751","https://openalex.org/W2039660151","https://openalex.org/W2280966491","https://openalex.org/W3186579242","https://openalex.org/W3162509081","https://openalex.org/W2100092422","https://openalex.org/W3010548836","https://openalex.org/W3023926859","https://openalex.org/W1662583677","https://openalex.org/W2903899730"],"abstract_inverted_index":{"In":[0,56,130],"the":[1,58,74,95,152,175],"twenty-first":[2],"century,":[3],"three":[4],"new":[5],"human":[6,68],"coronaviruses":[7,69],"have":[8],"been":[9],"identified":[10,31],"with":[11,38,80,124,151],"known":[12],"zoonotic":[13],"origins:":[14],"severe":[15],"acute":[16],"respiratory":[17,25],"syndrome":[18,26],"coronavirus":[19,27],"(SARS-CoV),":[20],"SARS-CoV-2,":[21,92],"and":[22,35,44,54,60,76,93,99,107,127,139,160,184],"Middle":[23],"East":[24],"(MERS-CoV).":[28],"SARS-CoV-2":[29],"was":[30],"in":[32],"November":[33],"2019":[34],"is":[36],"associated":[37,79],"an":[39,86],"ongoing":[40],"pandemic.":[41],"Molecular":[42],"surveillance":[43,154],"monitoring":[45],"studies":[46],"are":[47,70],"essential":[48],"for":[49,65,72,90,112,144,174],"containing":[50],"viral":[51],"outbreaks,":[52],"epidemics,":[53],"pandemics.":[55],"addition,":[57,131],"development":[59,176],"deployment":[61],"of":[62,177],"bioinformatics":[63,125],"resources":[64],"highly":[66],"pathogenic":[67],"crucial":[71],"understanding":[73],"genetic":[75],"immunogenic":[77],"landscape":[78],"these":[81,113,145],"viruses.":[82,114,146],"Here,":[83],"we":[84],"introduce":[85],"open-access,":[87],"integrated":[88],"resource":[89,148,173],"SARS-CoV,":[91],"MERS-CoV:":[94],"Human":[96],"Coronaviruses":[97],"Database":[98,187],"Analysis":[100],"Resource":[101],"(hCoronavirusesDB;":[102],"http://hcoronaviruses.net/),":[103],"which":[104],"include":[105],"nucleotide":[106],"protein":[108],"sequence":[109],"data":[110,143],"obtained":[111],"The":[115],"database":[116],"also":[117,168],"offers":[118],"a":[119,171],"user-friendly":[120],"search":[121],"interface":[122],"coupled":[123],"analytics":[126],"visualization":[128],"tools.":[129],"hCoronavirusesDB":[132],"contains":[133],"curated,":[134],"experimentally":[135],"validated":[136],"B":[137],"cell":[138,141],"T":[140],"epitope":[142],"This":[147,165],"can":[149,167],"assist":[150],"molecular":[153],"necessary":[155],"to":[156,162],"trace":[157],"virus":[158],"circulation":[159],"contribute":[161],"microevolutionary":[163],"studies.":[164],"application":[166],"serve":[169],"as":[170],"valuable":[172],"rationally":[178],"designed":[179],"pan-coronavirus":[180],"diagnostic":[181],"tools,":[182],"vaccines,":[183],"therapeutic":[185],"agents.":[186],"URL:http://hcoronaviruses.net/.":[188]},"counts_by_year":[{"year":2026,"cited_by_count":1},{"year":2025,"cited_by_count":1},{"year":2024,"cited_by_count":1},{"year":2023,"cited_by_count":2}],"updated_date":"2025-11-06T03:46:38.306776","created_date":"2025-10-10T00:00:00"}