{"id":"https://openalex.org/W4205423292","doi":"https://doi.org/10.1093/database/baab084","title":"MetaCOXI: an integrated collection of metazoan mitochondrial cytochrome oxidase subunit-I DNA sequences","display_name":"MetaCOXI: an integrated collection of metazoan mitochondrial cytochrome oxidase subunit-I DNA sequences","publication_year":2022,"publication_date":"2022-01-07","ids":{"openalex":"https://openalex.org/W4205423292","doi":"https://doi.org/10.1093/database/baab084","pmid":"https://pubmed.ncbi.nlm.nih.gov/35134858"},"language":"en","primary_location":{"id":"doi:10.1093/database/baab084","is_oa":true,"landing_page_url":"https://doi.org/10.1093/database/baab084","pdf_url":"https://academic.oup.com/database/article-pdf/doi/10.1093/database/baab084/42558847/baab084.pdf","source":{"id":"https://openalex.org/S4210201630","display_name":"Database","issn_l":"1758-0463","issn":["1758-0463"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311647","host_organization_name":"University of Oxford","host_organization_lineage":["https://openalex.org/P4310311647"],"host_organization_lineage_names":["University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Database","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://academic.oup.com/database/article-pdf/doi/10.1093/database/baab084/42558847/baab084.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5069107141","display_name":"Bachir Balech","orcid":"https://orcid.org/0000-0002-4419-0729"},"institutions":[{"id":"https://openalex.org/I4210148743","display_name":"Institute of Biomembranes, Bioenergetics and Molecular Biotechnologies","ror":"https://ror.org/05nzf7q96","country_code":"IT","type":"facility","lineage":["https://openalex.org/I4210148743","https://openalex.org/I4210155236"]},{"id":"https://openalex.org/I4210155236","display_name":"National Research Council","ror":"https://ror.org/04zaypm56","country_code":"IT","type":"funder","lineage":["https://openalex.org/I4210155236"]}],"countries":["IT"],"is_corresponding":true,"raw_author_name":"Bachir Balech","raw_affiliation_strings":["Institute of Biomembranes, Bioenergetics and Molecular Biotechnologies, National Research Council of Italy, via Amendola 122/O, Bari 70126, Italy"],"affiliations":[{"raw_affiliation_string":"Institute of Biomembranes, Bioenergetics and Molecular Biotechnologies, National Research Council of Italy, via Amendola 122/O, Bari 70126, Italy","institution_ids":["https://openalex.org/I4210155236","https://openalex.org/I4210148743"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5106522097","display_name":"Anna Sandionigi","orcid":"https://orcid.org/0000-0002-5257-0027"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Anna Sandionigi","raw_affiliation_strings":["Research and Development Department, Quantia Consulting srl, via Francesco Petrarca 20, Mariano Comense 22066, Italy"],"affiliations":[{"raw_affiliation_string":"Research and Development Department, Quantia Consulting srl, via Francesco Petrarca 20, Mariano Comense 22066, Italy","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5070018825","display_name":"Marinella Marzano","orcid":"https://orcid.org/0000-0002-9996-8817"},"institutions":[{"id":"https://openalex.org/I4210155236","display_name":"National Research Council","ror":"https://ror.org/04zaypm56","country_code":"IT","type":"funder","lineage":["https://openalex.org/I4210155236"]},{"id":"https://openalex.org/I4210148743","display_name":"Institute of Biomembranes, Bioenergetics and Molecular Biotechnologies","ror":"https://ror.org/05nzf7q96","country_code":"IT","type":"facility","lineage":["https://openalex.org/I4210148743","https://openalex.org/I4210155236"]}],"countries":["IT"],"is_corresponding":false,"raw_author_name":"Marinella Marzano","raw_affiliation_strings":["Institute of Biomembranes, Bioenergetics and Molecular Biotechnologies, National Research Council of Italy, via Amendola 122/O, Bari 70126, Italy"],"affiliations":[{"raw_affiliation_string":"Institute of Biomembranes, Bioenergetics and Molecular Biotechnologies, National Research Council of Italy, via Amendola 122/O, Bari 70126, Italy","institution_ids":["https://openalex.org/I4210155236","https://openalex.org/I4210148743"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5005312066","display_name":"Graziano Pesole","orcid":"https://orcid.org/0000-0003-3663-0859"},"institutions":[{"id":"https://openalex.org/I4210148743","display_name":"Institute of Biomembranes, Bioenergetics and Molecular Biotechnologies","ror":"https://ror.org/05nzf7q96","country_code":"IT","type":"facility","lineage":["https://openalex.org/I4210148743","https://openalex.org/I4210155236"]},{"id":"https://openalex.org/I5561750","display_name":"University of Bari Aldo Moro","ror":"https://ror.org/027ynra39","country_code":"IT","type":"education","lineage":["https://openalex.org/I5561750"]},{"id":"https://openalex.org/I4210155236","display_name":"National Research Council","ror":"https://ror.org/04zaypm56","country_code":"IT","type":"funder","lineage":["https://openalex.org/I4210155236"]}],"countries":["IT"],"is_corresponding":false,"raw_author_name":"Graziano Pesole","raw_affiliation_strings":["Department of Biosciences, Biotechnology and Biopharmaceutics, University of Bari \u2018A. Moro\u2019, via Orabona 4, Bari 70126, Italy","Institute of Biomembranes, Bioenergetics and Molecular Biotechnologies, National Research Council of Italy, via Amendola 122/O, Bari 70126, Italy","Department of Biosciences, Biotechnology and Biopharmaceutics, University of Bari 'A. Moro', via Orabona 4, Bari 70126, Italy"],"affiliations":[{"raw_affiliation_string":"Department of Biosciences, Biotechnology and Biopharmaceutics, University of Bari \u2018A. Moro\u2019, via Orabona 4, Bari 70126, Italy","institution_ids":["https://openalex.org/I5561750"]},{"raw_affiliation_string":"Institute of Biomembranes, Bioenergetics and Molecular Biotechnologies, National Research Council of Italy, via Amendola 122/O, Bari 70126, Italy","institution_ids":["https://openalex.org/I4210155236","https://openalex.org/I4210148743"]},{"raw_affiliation_string":"Department of Biosciences, Biotechnology and Biopharmaceutics, University of Bari 'A. Moro', via Orabona 4, Bari 70126, Italy","institution_ids":["https://openalex.org/I5561750"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5012981755","display_name":"M\u00f3nica Santamar\u00eda","orcid":"https://orcid.org/0000-0003-1488-6052"},"institutions":[{"id":"https://openalex.org/I4210148743","display_name":"Institute of Biomembranes, Bioenergetics and Molecular Biotechnologies","ror":"https://ror.org/05nzf7q96","country_code":"IT","type":"facility","lineage":["https://openalex.org/I4210148743","https://openalex.org/I4210155236"]},{"id":"https://openalex.org/I4210155236","display_name":"National Research Council","ror":"https://ror.org/04zaypm56","country_code":"IT","type":"funder","lineage":["https://openalex.org/I4210155236"]}],"countries":["IT"],"is_corresponding":false,"raw_author_name":"Monica Santamaria","raw_affiliation_strings":["Institute of Biomembranes, Bioenergetics and Molecular Biotechnologies, National Research Council of Italy, via Amendola 122/O, Bari 70126, Italy"],"affiliations":[{"raw_affiliation_string":"Institute of Biomembranes, Bioenergetics and Molecular Biotechnologies, National Research Council of Italy, via Amendola 122/O, Bari 70126, Italy","institution_ids":["https://openalex.org/I4210155236","https://openalex.org/I4210148743"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":5,"corresponding_author_ids":["https://openalex.org/A5069107141"],"corresponding_institution_ids":["https://openalex.org/I4210148743","https://openalex.org/I4210155236"],"apc_list":{"value":1415,"currency":"GBP","value_usd":1735},"apc_paid":{"value":1415,"currency":"GBP","value_usd":1735},"fwci":3.014,"has_fulltext":true,"cited_by_count":18,"citation_normalized_percentile":{"value":0.90755349,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":94,"max":99},"biblio":{"volume":"2022","issue":null,"first_page":null,"last_page":null},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T12640","display_name":"Environmental DNA in Biodiversity Studies","score":1.0,"subfield":{"id":"https://openalex.org/subfields/2303","display_name":"Ecology"},"field":{"id":"https://openalex.org/fields/23","display_name":"Environmental Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T12640","display_name":"Environmental DNA in Biodiversity Studies","score":1.0,"subfield":{"id":"https://openalex.org/subfields/2303","display_name":"Ecology"},"field":{"id":"https://openalex.org/fields/23","display_name":"Environmental Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9948999881744385,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11791","display_name":"Microbial Community Ecology and Physiology","score":0.992900013923645,"subfield":{"id":"https://openalex.org/subfields/2303","display_name":"Ecology"},"field":{"id":"https://openalex.org/fields/23","display_name":"Environmental Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/barcode","display_name":"Barcode","score":0.8017970323562622},{"id":"https://openalex.org/keywords/metadata","display_name":"Metadata","score":0.7720494866371155},{"id":"https://openalex.org/keywords/dna-barcoding","display_name":"DNA barcoding","score":0.7489274740219116},{"id":"https://openalex.org/keywords/taxonomy","display_name":"Taxonomy (biology)","score":0.6382580995559692},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.5569978356361389},{"id":"https://openalex.org/keywords/cytochrome-c-oxidase-subunit-i","display_name":"Cytochrome c oxidase subunit I","score":0.45369791984558105},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.4480137526988983},{"id":"https://openalex.org/keywords/information-retrieval","display_name":"Information retrieval","score":0.42323964834213257},{"id":"https://openalex.org/keywords/dna-sequencing","display_name":"DNA sequencing","score":0.4220849275588989},{"id":"https://openalex.org/keywords/mitochondrial-dna","display_name":"Mitochondrial DNA","score":0.40814244747161865},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.3974653482437134},{"id":"https://openalex.org/keywords/database","display_name":"Database","score":0.38800621032714844},{"id":"https://openalex.org/keywords/world-wide-web","display_name":"World Wide Web","score":0.23377671837806702},{"id":"https://openalex.org/keywords/dna","display_name":"DNA","score":0.22865751385688782},{"id":"https://openalex.org/keywords/evolutionary-biology","display_name":"Evolutionary biology","score":0.21260279417037964},{"id":"https://openalex.org/keywords/ecology","display_name":"Ecology","score":0.1771167814731598},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.14427512884140015}],"concepts":[{"id":"https://openalex.org/C2776841711","wikidata":"https://www.wikidata.org/wiki/Q856","display_name":"Barcode","level":2,"score":0.8017970323562622},{"id":"https://openalex.org/C93518851","wikidata":"https://www.wikidata.org/wiki/Q180160","display_name":"Metadata","level":2,"score":0.7720494866371155},{"id":"https://openalex.org/C141732470","wikidata":"https://www.wikidata.org/wiki/Q1154642","display_name":"DNA barcoding","level":2,"score":0.7489274740219116},{"id":"https://openalex.org/C58642233","wikidata":"https://www.wikidata.org/wiki/Q8269924","display_name":"Taxonomy (biology)","level":2,"score":0.6382580995559692},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.5569978356361389},{"id":"https://openalex.org/C2778200843","wikidata":"https://www.wikidata.org/wiki/Q14865314","display_name":"Cytochrome c oxidase subunit I","level":4,"score":0.45369791984558105},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.4480137526988983},{"id":"https://openalex.org/C23123220","wikidata":"https://www.wikidata.org/wiki/Q816826","display_name":"Information retrieval","level":1,"score":0.42323964834213257},{"id":"https://openalex.org/C51679486","wikidata":"https://www.wikidata.org/wiki/Q380546","display_name":"DNA sequencing","level":3,"score":0.4220849275588989},{"id":"https://openalex.org/C24586158","wikidata":"https://www.wikidata.org/wiki/Q27075","display_name":"Mitochondrial DNA","level":3,"score":0.40814244747161865},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.3974653482437134},{"id":"https://openalex.org/C77088390","wikidata":"https://www.wikidata.org/wiki/Q8513","display_name":"Database","level":1,"score":0.38800621032714844},{"id":"https://openalex.org/C136764020","wikidata":"https://www.wikidata.org/wiki/Q466","display_name":"World Wide Web","level":1,"score":0.23377671837806702},{"id":"https://openalex.org/C552990157","wikidata":"https://www.wikidata.org/wiki/Q7430","display_name":"DNA","level":2,"score":0.22865751385688782},{"id":"https://openalex.org/C78458016","wikidata":"https://www.wikidata.org/wiki/Q840400","display_name":"Evolutionary biology","level":1,"score":0.21260279417037964},{"id":"https://openalex.org/C18903297","wikidata":"https://www.wikidata.org/wiki/Q7150","display_name":"Ecology","level":1,"score":0.1771167814731598},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.14427512884140015},{"id":"https://openalex.org/C111919701","wikidata":"https://www.wikidata.org/wiki/Q9135","display_name":"Operating system","level":1,"score":0.0},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.0}],"mesh":[{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001483","descriptor_name":"Base Sequence","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001483","descriptor_name":"Base Sequence","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001483","descriptor_name":"Base Sequence","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003576","descriptor_name":"Electron Transport Complex IV","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D003576","descriptor_name":"Electron Transport Complex IV","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D003576","descriptor_name":"Electron Transport Complex IV","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D004272","descriptor_name":"DNA, Mitochondrial","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D004272","descriptor_name":"DNA, Mitochondrial","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D004272","descriptor_name":"DNA, Mitochondrial","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D058893","descriptor_name":"DNA Barcoding, Taxonomic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D058893","descriptor_name":"DNA Barcoding, Taxonomic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D058893","descriptor_name":"DNA Barcoding, Taxonomic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true}],"locations_count":4,"locations":[{"id":"doi:10.1093/database/baab084","is_oa":true,"landing_page_url":"https://doi.org/10.1093/database/baab084","pdf_url":"https://academic.oup.com/database/article-pdf/doi/10.1093/database/baab084/42558847/baab084.pdf","source":{"id":"https://openalex.org/S4210201630","display_name":"Database","issn_l":"1758-0463","issn":["1758-0463"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311647","host_organization_name":"University of Oxford","host_organization_lineage":["https://openalex.org/P4310311647"],"host_organization_lineage_names":["University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Database","raw_type":"journal-article"},{"id":"pmid:35134858","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/35134858","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Database : the journal of biological databases and curation","raw_type":null},{"id":"pmh:oai:pubmedcentral.nih.gov:9216479","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/9216479","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Database (Oxford)","raw_type":"Text"},{"id":"pmh:oai:ricerca.uniba.it:11586/401496","is_oa":true,"landing_page_url":"https://hdl.handle.net/11586/401496","pdf_url":null,"source":{"id":"https://openalex.org/S4377196296","display_name":"CINECA IRIS Institutional Research Information System (University of Bari Aldo Moro)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I5561750","host_organization_name":"University of Bari Aldo Moro","host_organization_lineage":["https://openalex.org/I5561750"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"info:eu-repo/semantics/article"}],"best_oa_location":{"id":"doi:10.1093/database/baab084","is_oa":true,"landing_page_url":"https://doi.org/10.1093/database/baab084","pdf_url":"https://academic.oup.com/database/article-pdf/doi/10.1093/database/baab084/42558847/baab084.pdf","source":{"id":"https://openalex.org/S4210201630","display_name":"Database","issn_l":"1758-0463","issn":["1758-0463"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311647","host_organization_name":"University of Oxford","host_organization_lineage":["https://openalex.org/P4310311647"],"host_organization_lineage_names":["University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Database","raw_type":"journal-article"},"sustainable_development_goals":[{"display_name":"Life in Land","id":"https://metadata.un.org/sdg/15","score":0.5}],"awards":[],"funders":[{"id":"https://openalex.org/F4320332999","display_name":"Horizon 2020 Framework Programme","ror":"https://ror.org/00k4n6c32"}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W4205423292.pdf","grobid_xml":"https://content.openalex.org/works/W4205423292.grobid-xml"},"referenced_works_count":36,"referenced_works":["https://openalex.org/W2039683756","https://openalex.org/W2099901798","https://openalex.org/W2120358246","https://openalex.org/W2124351063","https://openalex.org/W2129687578","https://openalex.org/W2138122982","https://openalex.org/W2142678478","https://openalex.org/W2149415648","https://openalex.org/W2193447811","https://openalex.org/W2302501749","https://openalex.org/W2399505870","https://openalex.org/W2521644033","https://openalex.org/W2626467946","https://openalex.org/W2754769271","https://openalex.org/W2792039220","https://openalex.org/W2801860893","https://openalex.org/W2808338878","https://openalex.org/W2885428107","https://openalex.org/W2912959159","https://openalex.org/W2916299281","https://openalex.org/W2919018280","https://openalex.org/W2943747632","https://openalex.org/W3008013974","https://openalex.org/W3029899841","https://openalex.org/W3040379405","https://openalex.org/W3048090444","https://openalex.org/W3049602599","https://openalex.org/W3088144981","https://openalex.org/W3093645716","https://openalex.org/W3095583226","https://openalex.org/W3121953277","https://openalex.org/W3138617267","https://openalex.org/W3157166270","https://openalex.org/W4246017557","https://openalex.org/W6749229622","https://openalex.org/W6758420908"],"related_works":["https://openalex.org/W2402613932","https://openalex.org/W2111456242","https://openalex.org/W4291786356","https://openalex.org/W2360712899","https://openalex.org/W2097619744","https://openalex.org/W2509660947","https://openalex.org/W2394007119","https://openalex.org/W2184079388","https://openalex.org/W2911724990","https://openalex.org/W2032317445"],"abstract_inverted_index":{"Nucleotide":[0,154],"sequences":[1,131,224],"reference":[2,37,110,194],"collections":[3],"or":[4,238],"databases":[5],"are":[6],"fundamental":[7],"components":[8],"in":[9,61,218,236],"DNA":[10,58,101,130,204,240],"barcoding":[11,241],"and":[12,35,40,83,112,137,157,182,196,212,229],"metabarcoding":[13,243],"data":[14,81,90,149,244],"analyses":[15],"pipelines.":[16,246],"In":[17],"such":[18,206],"analyses,":[19],"the":[20,31,49,66,72,75,144,152,158],"accurate":[21],"taxonomic":[22,189],"assignment":[23],"is":[24,216],"a":[25,56],"crucial":[26],"aspect,":[27],"relying":[28],"directly":[29],"on":[30,71,143,192],"availability":[32,73],"of":[33,48,74,126,160],"comprehensive":[34],"curated":[36,127],"sequence":[38,102],"collection":[39,125,140],"its":[41],"taxonomy":[42,106,136,228],"information.":[43],"The":[44,165],"currently":[45],"wide":[46],"use":[47],"mitochondrial":[50],"cytochrome":[51],"oxidase":[52],"subunit-I":[53],"(COXI)":[54],"as":[55,207],"standard":[57,219,237],"barcode":[59],"marker":[60],"metazoan":[62,128],"biodiversity":[63],"studies":[64],"highlights":[65],"need":[67],"to":[68,116,176,180,202],"shed":[69],"light":[70],"related":[76,188],"relevant":[77,201],"information":[78],"from":[79,100],"different":[80],"sources":[82],"their":[84,133,187,197],"eventual":[85],"integration.":[86],"To":[87],"adequately":[88],"address":[89],"integration":[91],"process,":[92],"many":[93],"aspects":[94],"should":[95],"be":[96,233],"markedly":[97],"considered":[98],"starting":[99],"curation":[103],"followed":[104],"by":[105],"alignment":[107],"with":[108,132],"solid":[109],"backbone":[111],"metadata":[113,200],"harmonization":[114],"according":[115],"universal":[117,220],"standards.":[118],"Here,":[119],"we":[120],"present":[121],"MetaCOXI,":[122],"an":[123],"integrated":[124],"COXI":[129],"associated":[134],"harmonized":[135],"metadata.":[138],"This":[139],"was":[141],"built":[142],"two":[145],"most":[146],"extensive":[147],"available":[148,198,217],"resources,":[150],"namely":[151],"European":[153],"Archive":[155],"(ENA)":[156],"Barcode":[159],"Life":[161],"Data":[162],"System":[163],"(BOLD).":[164],"current":[166],"release":[167],"contains":[168],"more":[169],"than":[170],"5.6":[171],"million":[172],"entries":[173],"(39.1%":[174],"unique":[175,179],"BOLD,":[177],"3.6%":[178],"ENA,":[181],"57.2%":[183],"shared":[184],"between":[185],"both),":[186],"classification":[190],"based":[191],"NCBI":[193],"taxonomy,":[195],"main":[199],"environmental":[203],"studies,":[205],"geographical":[208],"coordinates,":[209],"sampling":[210],"country":[211],"host":[213],"species.":[214],"MetaCOXI":[215],"formats":[221],"('fasta'":[222],"for":[223,227],"&":[225],"'tsv'":[226],"metadata),":[230],"which":[231],"can":[232],"easily":[234],"incorporated":[235],"specific":[239],"and/or":[242],"analysis":[245],"Database":[247],"URL:":[248],"https://github.com/bachob5/MetaCOXI.":[249]},"counts_by_year":[{"year":2025,"cited_by_count":4},{"year":2024,"cited_by_count":8},{"year":2023,"cited_by_count":4},{"year":2022,"cited_by_count":2}],"updated_date":"2025-11-06T03:46:38.306776","created_date":"2025-10-10T00:00:00"}
