{"id":"https://openalex.org/W3178133830","doi":"https://doi.org/10.1093/database/baab043","title":"The Progenetix oncogenomic resource in 2021","display_name":"The Progenetix oncogenomic resource in 2021","publication_year":2021,"publication_date":"2021-01-01","ids":{"openalex":"https://openalex.org/W3178133830","doi":"https://doi.org/10.1093/database/baab043","mag":"3178133830","pmid":"https://pubmed.ncbi.nlm.nih.gov/34272855"},"language":"en","primary_location":{"id":"doi:10.1093/database/baab043","is_oa":true,"landing_page_url":"https://doi.org/10.1093/database/baab043","pdf_url":"https://academic.oup.com/database/article-pdf/doi/10.1093/database/baab043/39073397/baab043.pdf","source":{"id":"https://openalex.org/S4210201630","display_name":"Database","issn_l":"1758-0463","issn":["1758-0463"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311647","host_organization_name":"University of Oxford","host_organization_lineage":["https://openalex.org/P4310311647"],"host_organization_lineage_names":["University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Database","raw_type":"journal-article"},"type":"review","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://academic.oup.com/database/article-pdf/doi/10.1093/database/baab043/39073397/baab043.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5045823901","display_name":"Qingyao Huang","orcid":"https://orcid.org/0000-0002-8255-4722"},"institutions":[{"id":"https://openalex.org/I12708293","display_name":"SIB Swiss Institute of Bioinformatics","ror":"https://ror.org/002n09z45","country_code":"CH","type":"funder","lineage":["https://openalex.org/I12708293"]},{"id":"https://openalex.org/I202697423","display_name":"University of Zurich","ror":"https://ror.org/02crff812","country_code":"CH","type":"education","lineage":["https://openalex.org/I202697423"]}],"countries":["CH"],"is_corresponding":false,"raw_author_name":"Qingyao Huang","raw_affiliation_strings":["Department of Molecular Life Sciences, University of Zurich, Winterthurerstrasse 190, Zurich 8057, Switzerland","Swiss Institute of Bioinformatics, Winterthurerstrasse 190, Zurich 8057, Switzerland"],"affiliations":[{"raw_affiliation_string":"Department of Molecular Life Sciences, University of Zurich, Winterthurerstrasse 190, Zurich 8057, Switzerland","institution_ids":["https://openalex.org/I202697423"]},{"raw_affiliation_string":"Swiss Institute of Bioinformatics, Winterthurerstrasse 190, Zurich 8057, Switzerland","institution_ids":["https://openalex.org/I12708293"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5009683403","display_name":"Paula Carrio-Cordo","orcid":"https://orcid.org/0000-0002-9367-640X"},"institutions":[{"id":"https://openalex.org/I12708293","display_name":"SIB Swiss Institute of Bioinformatics","ror":"https://ror.org/002n09z45","country_code":"CH","type":"funder","lineage":["https://openalex.org/I12708293"]},{"id":"https://openalex.org/I202697423","display_name":"University of Zurich","ror":"https://ror.org/02crff812","country_code":"CH","type":"education","lineage":["https://openalex.org/I202697423"]}],"countries":["CH"],"is_corresponding":false,"raw_author_name":"Paula Carrio-Cordo","raw_affiliation_strings":["Department of Molecular Life Sciences, University of Zurich, Winterthurerstrasse 190, Zurich 8057, Switzerland","Swiss Institute of Bioinformatics, Winterthurerstrasse 190, Zurich 8057, Switzerland"],"affiliations":[{"raw_affiliation_string":"Department of Molecular Life Sciences, University of Zurich, Winterthurerstrasse 190, Zurich 8057, Switzerland","institution_ids":["https://openalex.org/I202697423"]},{"raw_affiliation_string":"Swiss Institute of Bioinformatics, Winterthurerstrasse 190, Zurich 8057, Switzerland","institution_ids":["https://openalex.org/I12708293"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5067601372","display_name":"Bo Gao","orcid":"https://orcid.org/0000-0003-2818-4000"},"institutions":[{"id":"https://openalex.org/I202697423","display_name":"University of Zurich","ror":"https://ror.org/02crff812","country_code":"CH","type":"education","lineage":["https://openalex.org/I202697423"]},{"id":"https://openalex.org/I12708293","display_name":"SIB Swiss Institute of Bioinformatics","ror":"https://ror.org/002n09z45","country_code":"CH","type":"funder","lineage":["https://openalex.org/I12708293"]}],"countries":["CH"],"is_corresponding":false,"raw_author_name":"Bo Gao","raw_affiliation_strings":["Department of Molecular Life Sciences, University of Zurich, Winterthurerstrasse 190, Zurich 8057, Switzerland","Swiss Institute of Bioinformatics, Winterthurerstrasse 190, Zurich 8057, Switzerland"],"affiliations":[{"raw_affiliation_string":"Department of Molecular Life Sciences, University of Zurich, Winterthurerstrasse 190, Zurich 8057, Switzerland","institution_ids":["https://openalex.org/I202697423"]},{"raw_affiliation_string":"Swiss Institute of Bioinformatics, Winterthurerstrasse 190, Zurich 8057, Switzerland","institution_ids":["https://openalex.org/I12708293"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5019435324","display_name":"Rahel Paloots","orcid":"https://orcid.org/0000-0003-1239-1689"},"institutions":[{"id":"https://openalex.org/I12708293","display_name":"SIB Swiss Institute of Bioinformatics","ror":"https://ror.org/002n09z45","country_code":"CH","type":"funder","lineage":["https://openalex.org/I12708293"]},{"id":"https://openalex.org/I202697423","display_name":"University of Zurich","ror":"https://ror.org/02crff812","country_code":"CH","type":"education","lineage":["https://openalex.org/I202697423"]}],"countries":["CH"],"is_corresponding":false,"raw_author_name":"Rahel Paloots","raw_affiliation_strings":["Department of Molecular Life Sciences, University of Zurich, Winterthurerstrasse 190, Zurich 8057, Switzerland","Swiss Institute of Bioinformatics, Winterthurerstrasse 190, Zurich 8057, Switzerland"],"affiliations":[{"raw_affiliation_string":"Department of Molecular Life Sciences, University of Zurich, Winterthurerstrasse 190, Zurich 8057, Switzerland","institution_ids":["https://openalex.org/I202697423"]},{"raw_affiliation_string":"Swiss Institute of Bioinformatics, Winterthurerstrasse 190, Zurich 8057, Switzerland","institution_ids":["https://openalex.org/I12708293"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5023290722","display_name":"Michael Baudis","orcid":"https://orcid.org/0000-0002-9903-4248"},"institutions":[{"id":"https://openalex.org/I12708293","display_name":"SIB Swiss Institute of Bioinformatics","ror":"https://ror.org/002n09z45","country_code":"CH","type":"funder","lineage":["https://openalex.org/I12708293"]},{"id":"https://openalex.org/I202697423","display_name":"University of Zurich","ror":"https://ror.org/02crff812","country_code":"CH","type":"education","lineage":["https://openalex.org/I202697423"]}],"countries":["CH"],"is_corresponding":true,"raw_author_name":"Michael Baudis","raw_affiliation_strings":["Department of Molecular Life Sciences, University of Zurich, Winterthurerstrasse 190, Zurich 8057, Switzerland","Swiss Institute of Bioinformatics, Winterthurerstrasse 190, Zurich 8057, Switzerland"],"affiliations":[{"raw_affiliation_string":"Department of Molecular Life Sciences, University of Zurich, Winterthurerstrasse 190, Zurich 8057, Switzerland","institution_ids":["https://openalex.org/I202697423"]},{"raw_affiliation_string":"Swiss Institute of Bioinformatics, Winterthurerstrasse 190, Zurich 8057, Switzerland","institution_ids":["https://openalex.org/I12708293"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":5,"corresponding_author_ids":["https://openalex.org/A5023290722"],"corresponding_institution_ids":["https://openalex.org/I12708293","https://openalex.org/I202697423"],"apc_list":{"value":1415,"currency":"GBP","value_usd":1735},"apc_paid":{"value":1415,"currency":"GBP","value_usd":1735},"fwci":1.8349,"has_fulltext":true,"cited_by_count":32,"citation_normalized_percentile":{"value":0.85281398,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":99},"biblio":{"volume":"2021","issue":null,"first_page":null,"last_page":null},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11287","display_name":"Cancer Genomics and Diagnostics","score":0.9998000264167786,"subfield":{"id":"https://openalex.org/subfields/1306","display_name":"Cancer Research"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11287","display_name":"Cancer Genomics and Diagnostics","score":0.9998000264167786,"subfield":{"id":"https://openalex.org/subfields/1306","display_name":"Cancer Research"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10269","display_name":"Epigenetics and DNA Methylation","score":0.9987999796867371,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11213","display_name":"Genomic variations and chromosomal abnormalities","score":0.9965000152587891,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/metadata","display_name":"Metadata","score":0.7017771601676941},{"id":"https://openalex.org/keywords/genomics","display_name":"Genomics","score":0.5314300060272217},{"id":"https://openalex.org/keywords/copy-number-variation","display_name":"Copy-number variation","score":0.46353745460510254},{"id":"https://openalex.org/keywords/data-quality","display_name":"Data quality","score":0.4553246796131134},{"id":"https://openalex.org/keywords/genome","display_name":"Genome","score":0.41988348960876465},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.41157296299934387},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.3888537287712097},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.3809678852558136},{"id":"https://openalex.org/keywords/database","display_name":"Database","score":0.34766125679016113},{"id":"https://openalex.org/keywords/data-science","display_name":"Data science","score":0.3353663682937622},{"id":"https://openalex.org/keywords/world-wide-web","display_name":"World Wide Web","score":0.265394926071167},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.1810746192932129}],"concepts":[{"id":"https://openalex.org/C93518851","wikidata":"https://www.wikidata.org/wiki/Q180160","display_name":"Metadata","level":2,"score":0.7017771601676941},{"id":"https://openalex.org/C189206191","wikidata":"https://www.wikidata.org/wiki/Q222046","display_name":"Genomics","level":4,"score":0.5314300060272217},{"id":"https://openalex.org/C120821319","wikidata":"https://www.wikidata.org/wiki/Q1501491","display_name":"Copy-number variation","level":4,"score":0.46353745460510254},{"id":"https://openalex.org/C24756922","wikidata":"https://www.wikidata.org/wiki/Q1757694","display_name":"Data quality","level":3,"score":0.4553246796131134},{"id":"https://openalex.org/C141231307","wikidata":"https://www.wikidata.org/wiki/Q7020","display_name":"Genome","level":3,"score":0.41988348960876465},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.41157296299934387},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.3888537287712097},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.3809678852558136},{"id":"https://openalex.org/C77088390","wikidata":"https://www.wikidata.org/wiki/Q8513","display_name":"Database","level":1,"score":0.34766125679016113},{"id":"https://openalex.org/C2522767166","wikidata":"https://www.wikidata.org/wiki/Q2374463","display_name":"Data science","level":1,"score":0.3353663682937622},{"id":"https://openalex.org/C136764020","wikidata":"https://www.wikidata.org/wiki/Q466","display_name":"World Wide Web","level":1,"score":0.265394926071167},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.1810746192932129},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.0},{"id":"https://openalex.org/C21547014","wikidata":"https://www.wikidata.org/wiki/Q1423657","display_name":"Operations management","level":1,"score":0.0},{"id":"https://openalex.org/C162324750","wikidata":"https://www.wikidata.org/wiki/Q8134","display_name":"Economics","level":0,"score":0.0},{"id":"https://openalex.org/C176217482","wikidata":"https://www.wikidata.org/wiki/Q860554","display_name":"Metric (unit)","level":2,"score":0.0}],"mesh":[{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D009369","descriptor_name":"Neoplasms","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D009369","descriptor_name":"Neoplasms","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D009369","descriptor_name":"Neoplasms","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D009369","descriptor_name":"Neoplasms","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D016678","descriptor_name":"Genome","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016678","descriptor_name":"Genome","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016678","descriptor_name":"Genome","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016678","descriptor_name":"Genome","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D056915","descriptor_name":"DNA Copy Number Variations","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D056915","descriptor_name":"DNA Copy Number Variations","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D056915","descriptor_name":"DNA Copy Number Variations","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D056915","descriptor_name":"DNA Copy Number Variations","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true}],"locations_count":3,"locations":[{"id":"doi:10.1093/database/baab043","is_oa":true,"landing_page_url":"https://doi.org/10.1093/database/baab043","pdf_url":"https://academic.oup.com/database/article-pdf/doi/10.1093/database/baab043/39073397/baab043.pdf","source":{"id":"https://openalex.org/S4210201630","display_name":"Database","issn_l":"1758-0463","issn":["1758-0463"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311647","host_organization_name":"University of Oxford","host_organization_lineage":["https://openalex.org/P4310311647"],"host_organization_lineage_names":["University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Database","raw_type":"journal-article"},{"id":"pmid:34272855","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/34272855","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Database : the journal of biological databases and curation","raw_type":null},{"id":"pmh:oai:pubmedcentral.nih.gov:8285936","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/8285936","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Database (Oxford)","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1093/database/baab043","is_oa":true,"landing_page_url":"https://doi.org/10.1093/database/baab043","pdf_url":"https://academic.oup.com/database/article-pdf/doi/10.1093/database/baab043/39073397/baab043.pdf","source":{"id":"https://openalex.org/S4210201630","display_name":"Database","issn_l":"1758-0463","issn":["1758-0463"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311647","host_organization_name":"University of Oxford","host_organization_lineage":["https://openalex.org/P4310311647"],"host_organization_lineage_names":["University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Database","raw_type":"journal-article"},"sustainable_development_goals":[{"score":0.4399999976158142,"id":"https://metadata.un.org/sdg/17","display_name":"Partnerships for the goals"}],"awards":[],"funders":[{"id":"https://openalex.org/F4320322725","display_name":"China Scholarship Council","ror":"https://ror.org/04atp4p48"}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W3178133830.pdf","grobid_xml":"https://content.openalex.org/works/W3178133830.grobid-xml"},"referenced_works_count":64,"referenced_works":["https://openalex.org/W56241122","https://openalex.org/W223909586","https://openalex.org/W1551210608","https://openalex.org/W1984065010","https://openalex.org/W2009752621","https://openalex.org/W2012945687","https://openalex.org/W2013112095","https://openalex.org/W2020541351","https://openalex.org/W2025183726","https://openalex.org/W2030093162","https://openalex.org/W2031772624","https://openalex.org/W2044540757","https://openalex.org/W2053108462","https://openalex.org/W2060084956","https://openalex.org/W2087162578","https://openalex.org/W2095787316","https://openalex.org/W2099742439","https://openalex.org/W2109465247","https://openalex.org/W2113980948","https://openalex.org/W2114843025","https://openalex.org/W2116034137","https://openalex.org/W2116089873","https://openalex.org/W2117692326","https://openalex.org/W2122039687","https://openalex.org/W2133174470","https://openalex.org/W2135488124","https://openalex.org/W2139266962","https://openalex.org/W2147428019","https://openalex.org/W2149441684","https://openalex.org/W2158485828","https://openalex.org/W2158922990","https://openalex.org/W2164716330","https://openalex.org/W2168169573","https://openalex.org/W2174515690","https://openalex.org/W2177825474","https://openalex.org/W2180180358","https://openalex.org/W2398213711","https://openalex.org/W2530308495","https://openalex.org/W2558643140","https://openalex.org/W2604823638","https://openalex.org/W2611603562","https://openalex.org/W2751187578","https://openalex.org/W2751916857","https://openalex.org/W2805978167","https://openalex.org/W2891720446","https://openalex.org/W2898321887","https://openalex.org/W2919288702","https://openalex.org/W2952265064","https://openalex.org/W3012065439","https://openalex.org/W3014687129","https://openalex.org/W3037087735","https://openalex.org/W3121331813","https://openalex.org/W3124994637","https://openalex.org/W3133926452","https://openalex.org/W3140808456","https://openalex.org/W3160517776","https://openalex.org/W3212791962","https://openalex.org/W4235443600","https://openalex.org/W6602259522","https://openalex.org/W6632908567","https://openalex.org/W6754903193","https://openalex.org/W6775289952","https://openalex.org/W6788355727","https://openalex.org/W6795109730"],"related_works":["https://openalex.org/W2058118494","https://openalex.org/W2392768766","https://openalex.org/W2382021449","https://openalex.org/W2095118173","https://openalex.org/W2106424170","https://openalex.org/W1985426483","https://openalex.org/W2501188010","https://openalex.org/W4299935056","https://openalex.org/W2010935248","https://openalex.org/W2768810474"],"abstract_inverted_index":{"In":[0,183],"cancer,":[1],"copy":[2,178],"number":[3,179,193],"aberrations":[4],"(CNAs)":[5],"represent":[6],"a":[7,58,69,188,203],"type":[8],"of":[9,37,44,61,71,116,127,165],"nearly":[10],"ubiquitous":[11],"and":[12,29,35,74,87,94,118,145,156,223,230],"frequently":[13],"extensive":[14],"structural":[15],"genome":[16,63,167],"variations.":[17],"To":[18],"disentangle":[19],"the":[20,33,48,98,110,114,149,161],"molecular":[21,31,128],"mechanisms":[22],"underlying":[23],"tumorigenesis":[24],"as":[25,27,136,138,216,218],"well":[26,137,217],"identify":[28],"characterize":[30],"subtypes,":[32],"comparative":[34],"meta-analysis":[36],"large":[38,59],"genomic":[39,52],"variant":[40],"collections":[41],"can":[42],"be":[43],"immense":[45],"importance.":[46],"Over":[47],"last":[49,111],"decades,":[50],"cancer":[51,84,107,119,166,214],"profiling":[53,169],"projects":[54],"have":[55,121,158],"resulted":[56,159],"in":[57,68,80,125,141,160,191,197,220],"amount":[60],"somatic":[62],"variation":[64,180],"profiles,":[65],"however":[66],"segregated":[67],"multitude":[70],"individual":[72,83],"studies":[73,93],"datasets.":[75],"The":[76],"Progenetix":[77,150],"project,":[78],"initiated":[79],"2001,":[81],"curates":[82],"CNA":[85,168],"profiles":[86],"associated":[88],"metadata":[89],"from":[90],"published":[91],"oncogenomic":[92],"data":[95,133,139,153,170,198,224,232],"repositories":[96],"with":[97,171,202],"aim":[99],"to":[100],"empower":[101],"integrative":[102],"analyses":[103],"spanning":[104],"all":[105],"different":[106],"biologies.":[108],"During":[109],"few":[112],"years,":[113],"fields":[115],"genomics":[117],"research":[120],"seen":[122],"significant":[123],"advancement":[124],"terms":[126,215],"genetics":[129],"technology,":[130],"disease":[131],"concepts,":[132],"standard":[134],"harmonization":[135],"availability,":[140],"an":[142],"increasingly":[143],"structured":[144],"systematic":[146],"manner.":[147],"For":[148],"resource,":[151],"continuous":[152],"integration,":[154],"curation":[155],"maintenance":[157],"most":[162],"comprehensive":[163],"representation":[164,201],"138":[172],"663":[173],"(including":[174],"115":[175],"357":[176],"tumor)":[177],"(CNV)":[181],"profiles.":[182],"this":[184],"article,":[185],"we":[186],"report":[187],"4.5-fold":[189],"increase":[190],"sample":[192],"since":[194],"2013,":[195],"improvements":[196],"quality,":[199],"ontology":[200],"CNV":[204],"landscape":[205],"summary":[206],"over":[207],"51":[208],"distinctive":[209],"National":[210],"Cancer":[211],"Institute":[212],"Thesaurus":[213],"updates":[219],"database":[221],"schemas,":[222],"access":[225],"including":[226],"new":[227],"web":[228],"front-end":[229],"programmatic":[231],"access.":[233],"Database":[234],"URL:":[235],"progenetix.org.":[236]},"counts_by_year":[{"year":2025,"cited_by_count":8},{"year":2024,"cited_by_count":7},{"year":2023,"cited_by_count":10},{"year":2022,"cited_by_count":2},{"year":2021,"cited_by_count":2},{"year":2018,"cited_by_count":1},{"year":2013,"cited_by_count":1},{"year":2012,"cited_by_count":1}],"updated_date":"2026-03-20T23:20:44.827607","created_date":"2025-10-10T00:00:00"}
