{"id":"https://openalex.org/W3133493506","doi":"https://doi.org/10.1093/database/baab009","title":"HIR V2: a human interactome resource for the biological interpretation of differentially expressed genes via gene set linkage analysis","display_name":"HIR V2: a human interactome resource for the biological interpretation of differentially expressed genes via gene set linkage analysis","publication_year":2021,"publication_date":"2021-01-01","ids":{"openalex":"https://openalex.org/W3133493506","doi":"https://doi.org/10.1093/database/baab009","mag":"3133493506","pmid":"https://pubmed.ncbi.nlm.nih.gov/33677507"},"language":"en","primary_location":{"id":"doi:10.1093/database/baab009","is_oa":true,"landing_page_url":"https://doi.org/10.1093/database/baab009","pdf_url":"https://academic.oup.com/database/article-pdf/doi/10.1093/database/baab009/36438264/baab009.pdf","source":{"id":"https://openalex.org/S4210201630","display_name":"Database","issn_l":"1758-0463","issn":["1758-0463"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311647","host_organization_name":"University of Oxford","host_organization_lineage":["https://openalex.org/P4310311647"],"host_organization_lineage_names":["University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Database","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://academic.oup.com/database/article-pdf/doi/10.1093/database/baab009/36438264/baab009.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5048727657","display_name":"Wen\u2010Ping Guo","orcid":"https://orcid.org/0000-0002-3047-179X"},"institutions":[{"id":"https://openalex.org/I82760581","display_name":"Taizhou University","ror":"https://ror.org/04fzhyx73","country_code":"CN","type":"education","lineage":["https://openalex.org/I82760581"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Wen-Ping Guo","raw_affiliation_strings":["Institute of Big Data and Artificial Intelligence in Medicine, School of Electronics and Information Engineering, Taizhou University, 1139 Shifu Avenue, Taizhou City, Zhejiang Province, Taizhou 318000, China"],"affiliations":[{"raw_affiliation_string":"Institute of Big Data and Artificial Intelligence in Medicine, School of Electronics and Information Engineering, Taizhou University, 1139 Shifu Avenue, Taizhou City, Zhejiang Province, Taizhou 318000, China","institution_ids":["https://openalex.org/I82760581"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5073817525","display_name":"Xiao\u2010Bao Ding","orcid":null},"institutions":[{"id":"https://openalex.org/I82760581","display_name":"Taizhou University","ror":"https://ror.org/04fzhyx73","country_code":"CN","type":"education","lineage":["https://openalex.org/I82760581"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Xiao-Bao Ding","raw_affiliation_strings":["Institute of Big Data and Artificial Intelligence in Medicine, School of Electronics and Information Engineering, Taizhou University, 1139 Shifu Avenue, Taizhou City, Zhejiang Province, Taizhou 318000, China"],"affiliations":[{"raw_affiliation_string":"Institute of Big Data and Artificial Intelligence in Medicine, School of Electronics and Information Engineering, Taizhou University, 1139 Shifu Avenue, Taizhou City, Zhejiang Province, Taizhou 318000, China","institution_ids":["https://openalex.org/I82760581"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5006210065","display_name":"Jie Jin","orcid":"https://orcid.org/0000-0001-8055-5265"},"institutions":[{"id":"https://openalex.org/I82760581","display_name":"Taizhou University","ror":"https://ror.org/04fzhyx73","country_code":"CN","type":"education","lineage":["https://openalex.org/I82760581"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Jie Jin","raw_affiliation_strings":["Institute of Big Data and Artificial Intelligence in Medicine, School of Electronics and Information Engineering, Taizhou University, 1139 Shifu Avenue, Taizhou City, Zhejiang Province, Taizhou 318000, China"],"affiliations":[{"raw_affiliation_string":"Institute of Big Data and Artificial Intelligence in Medicine, School of Electronics and Information Engineering, Taizhou University, 1139 Shifu Avenue, Taizhou City, Zhejiang Province, Taizhou 318000, China","institution_ids":["https://openalex.org/I82760581"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100415760","display_name":"Haibo Zhang","orcid":"https://orcid.org/0000-0002-5134-4167"},"institutions":[{"id":"https://openalex.org/I82760581","display_name":"Taizhou University","ror":"https://ror.org/04fzhyx73","country_code":"CN","type":"education","lineage":["https://openalex.org/I82760581"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Hai-bo Zhang","raw_affiliation_strings":["Institute of Big Data and Artificial Intelligence in Medicine, School of Electronics and Information Engineering, Taizhou University, 1139 Shifu Avenue, Taizhou City, Zhejiang Province, Taizhou 318000, China"],"affiliations":[{"raw_affiliation_string":"Institute of Big Data and Artificial Intelligence in Medicine, School of Electronics and Information Engineering, Taizhou University, 1139 Shifu Avenue, Taizhou City, Zhejiang Province, Taizhou 318000, China","institution_ids":["https://openalex.org/I82760581"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5048411213","display_name":"Qiao\u2010lei Yang","orcid":null},"institutions":[{"id":"https://openalex.org/I76130692","display_name":"Zhejiang University","ror":"https://ror.org/00a2xv884","country_code":"CN","type":"education","lineage":["https://openalex.org/I76130692"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Qiao-lei Yang","raw_affiliation_strings":["Institute of Pharmaceutical Biotechnology and the First Affiliated Hospital Department of Radiation Oncology, Zhejiang University School of Medicine, 866 Yuhangtang Road, Xihu District, Hangzhou City, Zhejiang Province, Hangzhou 310058, China"],"affiliations":[{"raw_affiliation_string":"Institute of Pharmaceutical Biotechnology and the First Affiliated Hospital Department of Radiation Oncology, Zhejiang University School of Medicine, 866 Yuhangtang Road, Xihu District, Hangzhou City, Zhejiang Province, Hangzhou 310058, China","institution_ids":["https://openalex.org/I76130692"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5101979964","display_name":"Pengcheng Chen","orcid":"https://orcid.org/0000-0002-7989-0194"},"institutions":[{"id":"https://openalex.org/I76130692","display_name":"Zhejiang University","ror":"https://ror.org/00a2xv884","country_code":"CN","type":"education","lineage":["https://openalex.org/I76130692"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Peng-Cheng Chen","raw_affiliation_strings":["Institute of Pharmaceutical Biotechnology and the First Affiliated Hospital Department of Radiation Oncology, Zhejiang University School of Medicine, 866 Yuhangtang Road, Xihu District, Hangzhou City, Zhejiang Province, Hangzhou 310058, China"],"affiliations":[{"raw_affiliation_string":"Institute of Pharmaceutical Biotechnology and the First Affiliated Hospital Department of Radiation Oncology, Zhejiang University School of Medicine, 866 Yuhangtang Road, Xihu District, Hangzhou City, Zhejiang Province, Hangzhou 310058, China","institution_ids":["https://openalex.org/I76130692"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5058083055","display_name":"Heng Yao","orcid":"https://orcid.org/0000-0002-3784-4157"},"institutions":[{"id":"https://openalex.org/I76130692","display_name":"Zhejiang University","ror":"https://ror.org/00a2xv884","country_code":"CN","type":"education","lineage":["https://openalex.org/I76130692"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Heng Yao","raw_affiliation_strings":["Institute of Pharmaceutical Biotechnology and the First Affiliated Hospital Department of Radiation Oncology, Zhejiang University School of Medicine, 866 Yuhangtang Road, Xihu District, Hangzhou City, Zhejiang Province, Hangzhou 310058, China"],"affiliations":[{"raw_affiliation_string":"Institute of Pharmaceutical Biotechnology and the First Affiliated Hospital Department of Radiation Oncology, Zhejiang University School of Medicine, 866 Yuhangtang Road, Xihu District, Hangzhou City, Zhejiang Province, Hangzhou 310058, China","institution_ids":["https://openalex.org/I76130692"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5014654362","display_name":"Li Ruan","orcid":"https://orcid.org/0009-0009-4200-4599"},"institutions":[{"id":"https://openalex.org/I82760581","display_name":"Taizhou University","ror":"https://ror.org/04fzhyx73","country_code":"CN","type":"education","lineage":["https://openalex.org/I82760581"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"L i Ruan","raw_affiliation_strings":["Institute of Big Data and Artificial Intelligence in Medicine, School of Electronics and Information Engineering, Taizhou University, 1139 Shifu Avenue, Taizhou City, Zhejiang Province, Taizhou 318000, China"],"affiliations":[{"raw_affiliation_string":"Institute of Big Data and Artificial Intelligence in Medicine, School of Electronics and Information Engineering, Taizhou University, 1139 Shifu Avenue, Taizhou City, Zhejiang Province, Taizhou 318000, China","institution_ids":["https://openalex.org/I82760581"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5053520439","display_name":"Yu\u2010Tian Tao","orcid":"https://orcid.org/0000-0002-9360-0771"},"institutions":[{"id":"https://openalex.org/I82760581","display_name":"Taizhou University","ror":"https://ror.org/04fzhyx73","country_code":"CN","type":"education","lineage":["https://openalex.org/I82760581"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Yu-Tian Tao","raw_affiliation_strings":["Institute of Big Data and Artificial Intelligence in Medicine, School of Electronics and Information Engineering, Taizhou University, 1139 Shifu Avenue, Taizhou City, Zhejiang Province, Taizhou 318000, China"],"affiliations":[{"raw_affiliation_string":"Institute of Big Data and Artificial Intelligence in Medicine, School of Electronics and Information Engineering, Taizhou University, 1139 Shifu Avenue, Taizhou City, Zhejiang Province, Taizhou 318000, China","institution_ids":["https://openalex.org/I82760581"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5063425778","display_name":"Xin Chen","orcid":"https://orcid.org/0000-0001-9646-080X"},"institutions":[{"id":"https://openalex.org/I76130692","display_name":"Zhejiang University","ror":"https://ror.org/00a2xv884","country_code":"CN","type":"education","lineage":["https://openalex.org/I76130692"]},{"id":"https://openalex.org/I82760581","display_name":"Taizhou University","ror":"https://ror.org/04fzhyx73","country_code":"CN","type":"education","lineage":["https://openalex.org/I82760581"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Xin Chen","raw_affiliation_strings":["Institute of Big Data and Artificial Intelligence in Medicine, School of Electronics and Information Engineering, Taizhou University, 1139 Shifu Avenue, Taizhou City, Zhejiang Province, Taizhou 318000, China","Institute of Pharmaceutical Biotechnology and the First Affiliated Hospital Department of Radiation Oncology, Zhejiang University School of Medicine, 866 Yuhangtang Road, Xihu District, Hangzhou City, Zhejiang Province, Hangzhou 310058, China","Joint Institute for Genetics and Genome Medicine between Zhejiang University and University of Toronto, Zhejiang University, 866 Yuhangtang Road, Xihu District, Hangzhou City, Zhejiang Province, Hangzhou 310058, China"],"affiliations":[{"raw_affiliation_string":"Institute of Big Data and Artificial Intelligence in Medicine, School of Electronics and Information Engineering, Taizhou University, 1139 Shifu Avenue, Taizhou City, Zhejiang Province, Taizhou 318000, China","institution_ids":["https://openalex.org/I82760581"]},{"raw_affiliation_string":"Institute of Pharmaceutical Biotechnology and the First Affiliated Hospital Department of Radiation Oncology, Zhejiang University School of Medicine, 866 Yuhangtang Road, Xihu District, Hangzhou City, Zhejiang Province, Hangzhou 310058, China","institution_ids":["https://openalex.org/I76130692"]},{"raw_affiliation_string":"Joint Institute for Genetics and Genome Medicine between Zhejiang University and University of Toronto, Zhejiang University, 866 Yuhangtang Road, Xihu District, Hangzhou City, Zhejiang Province, Hangzhou 310058, China","institution_ids":["https://openalex.org/I76130692"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":10,"corresponding_author_ids":["https://openalex.org/A5053520439","https://openalex.org/A5063425778"],"corresponding_institution_ids":["https://openalex.org/I76130692","https://openalex.org/I82760581"],"apc_list":{"value":1415,"currency":"GBP","value_usd":1735},"apc_paid":{"value":1415,"currency":"GBP","value_usd":1735},"fwci":0.4022,"has_fulltext":false,"cited_by_count":5,"citation_normalized_percentile":{"value":0.57658534,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":94,"max":97},"biblio":{"volume":"2021","issue":null,"first_page":null,"last_page":null},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":1.0,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":1.0,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10885","display_name":"Gene expression and cancer classification","score":0.9919999837875366,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10211","display_name":"Computational Drug Discovery Methods","score":0.9918000102043152,"subfield":{"id":"https://openalex.org/subfields/1703","display_name":"Computational Theory and Mathematics"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/interactome","display_name":"Interactome","score":0.885666012763977},{"id":"https://openalex.org/keywords/linkage","display_name":"Linkage (software)","score":0.7017767429351807},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.6597558856010437},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.6406488418579102},{"id":"https://openalex.org/keywords/set","display_name":"Set (abstract data type)","score":0.4957779347896576},{"id":"https://openalex.org/keywords/interpretation","display_name":"Interpretation (philosophy)","score":0.4798966646194458},{"id":"https://openalex.org/keywords/resource","display_name":"Resource (disambiguation)","score":0.46796852350234985},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.44584596157073975},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.4261767566204071},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.4046781659126282}],"concepts":[{"id":"https://openalex.org/C9760119","wikidata":"https://www.wikidata.org/wiki/Q841382","display_name":"Interactome","level":3,"score":0.885666012763977},{"id":"https://openalex.org/C31266012","wikidata":"https://www.wikidata.org/wiki/Q6554340","display_name":"Linkage (software)","level":3,"score":0.7017767429351807},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.6597558856010437},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.6406488418579102},{"id":"https://openalex.org/C177264268","wikidata":"https://www.wikidata.org/wiki/Q1514741","display_name":"Set (abstract data type)","level":2,"score":0.4957779347896576},{"id":"https://openalex.org/C527412718","wikidata":"https://www.wikidata.org/wiki/Q855395","display_name":"Interpretation (philosophy)","level":2,"score":0.4798966646194458},{"id":"https://openalex.org/C206345919","wikidata":"https://www.wikidata.org/wiki/Q20380951","display_name":"Resource (disambiguation)","level":2,"score":0.46796852350234985},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.44584596157073975},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.4261767566204071},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.4046781659126282},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.0},{"id":"https://openalex.org/C31258907","wikidata":"https://www.wikidata.org/wiki/Q1301371","display_name":"Computer network","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D059467","descriptor_name":"Transcriptome","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D059467","descriptor_name":"Transcriptome","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D059467","descriptor_name":"Transcriptome","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true}],"locations_count":3,"locations":[{"id":"doi:10.1093/database/baab009","is_oa":true,"landing_page_url":"https://doi.org/10.1093/database/baab009","pdf_url":"https://academic.oup.com/database/article-pdf/doi/10.1093/database/baab009/36438264/baab009.pdf","source":{"id":"https://openalex.org/S4210201630","display_name":"Database","issn_l":"1758-0463","issn":["1758-0463"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311647","host_organization_name":"University of Oxford","host_organization_lineage":["https://openalex.org/P4310311647"],"host_organization_lineage_names":["University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Database","raw_type":"journal-article"},{"id":"pmid:33677507","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/33677507","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Database : the journal of biological databases and curation","raw_type":null},{"id":"pmh:oai:pubmedcentral.nih.gov:7937034","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/7937034","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Database (Oxford)","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1093/database/baab009","is_oa":true,"landing_page_url":"https://doi.org/10.1093/database/baab009","pdf_url":"https://academic.oup.com/database/article-pdf/doi/10.1093/database/baab009/36438264/baab009.pdf","source":{"id":"https://openalex.org/S4210201630","display_name":"Database","issn_l":"1758-0463","issn":["1758-0463"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311647","host_organization_name":"University of Oxford","host_organization_lineage":["https://openalex.org/P4310311647"],"host_organization_lineage_names":["University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Database","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G4066614593","display_name":null,"funder_award_id":"81830073","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"}],"funders":[{"id":"https://openalex.org/F4320321001","display_name":"National Natural Science Foundation of China","ror":"https://ror.org/01h0zpd94"}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W3133493506.pdf","grobid_xml":"https://content.openalex.org/works/W3133493506.grobid-xml"},"referenced_works_count":50,"referenced_works":["https://openalex.org/W1490161904","https://openalex.org/W1997028817","https://openalex.org/W2020541351","https://openalex.org/W2043764521","https://openalex.org/W2054154684","https://openalex.org/W2071859591","https://openalex.org/W2084416533","https://openalex.org/W2089950573","https://openalex.org/W2096173332","https://openalex.org/W2104321823","https://openalex.org/W2105039688","https://openalex.org/W2109248504","https://openalex.org/W2110336366","https://openalex.org/W2114646110","https://openalex.org/W2115746733","https://openalex.org/W2118258530","https://openalex.org/W2122751330","https://openalex.org/W2122863289","https://openalex.org/W2137464714","https://openalex.org/W2140358747","https://openalex.org/W2141649011","https://openalex.org/W2146188765","https://openalex.org/W2153091158","https://openalex.org/W2153635508","https://openalex.org/W2158217645","https://openalex.org/W2159675211","https://openalex.org/W2277593669","https://openalex.org/W2313606004","https://openalex.org/W2404430975","https://openalex.org/W2511720523","https://openalex.org/W2521111409","https://openalex.org/W2534390616","https://openalex.org/W2542446037","https://openalex.org/W2559026306","https://openalex.org/W2559466477","https://openalex.org/W2563855213","https://openalex.org/W2611138580","https://openalex.org/W2761702546","https://openalex.org/W2766191963","https://openalex.org/W2793188099","https://openalex.org/W2897805491","https://openalex.org/W2898402099","https://openalex.org/W2901239961","https://openalex.org/W2913337434","https://openalex.org/W2917858269","https://openalex.org/W2938826237","https://openalex.org/W2962749243","https://openalex.org/W2979883485","https://openalex.org/W3136918052","https://openalex.org/W6725568326"],"related_works":["https://openalex.org/W4292634579","https://openalex.org/W2964314049","https://openalex.org/W2022326234","https://openalex.org/W1531941329","https://openalex.org/W4388694323","https://openalex.org/W3215098729","https://openalex.org/W4243081378","https://openalex.org/W1979330259","https://openalex.org/W2622356054","https://openalex.org/W2804670115"],"abstract_inverted_index":{"To":[0],"facilitate":[1],"biomedical":[2],"studies":[3],"of":[4,29,42,55,58,68,72,76,81,91,98,122,149],"disease":[5],"mechanisms,":[6],"a":[7,30],"high-quality":[8,140],"interactome":[9,45],"that":[10,60,96,175],"connects":[11],"functionally":[12],"related":[13],"genes":[14,77],"is":[15,135],"needed":[16],"to":[17,24,101,119,143,155,190],"help":[18],"investigators":[19],"formulate":[20],"pathway":[21],"hypotheses":[22],"and":[23,160,187,204,209],"interpret":[25],"the":[26,33,39,43,69,88,123,139,145,150,162,176,180,194],"biological":[27,34,158],"logic":[28],"phenotype":[31],"at":[32,213],"process":[35],"level.":[36],"Interactions":[37],"in":[38,85],"updated":[40],"version":[41,90],"human":[44,125],"resource":[46],"(HIR":[47],"V2)":[48],"were":[49],"inferred":[50],"from":[51],"36":[52],"mathematical":[53],"characterizations":[54],"six":[56],"types":[57],"data":[59],"suggest":[61],"functional":[62,79,94,109,147],"associations":[63,95],"between":[64,103],"genes.":[65],"This":[66],"update":[67],"HIR":[70,82,141,181,207],"consists":[71],"88":[73],"069":[74],"pairs":[75],"(23.2%":[78],"interactions":[80],"V2":[83,142,208],"are":[84,97,117,184,211],"common":[86],"with":[87],"previous":[89],"HIR),":[92],"representing":[93],"strengths":[99],"similar":[100],"those":[102,191],"well-studied":[104],"protein":[105,114,126],"interactions.":[106],"Among":[107],"these":[108],"interactions,":[110,115],"57%":[111],"may":[112],"represent":[113],"which":[116],"expected":[118],"cover":[120],"32%":[121],"true":[124],"interactome.":[127],"The":[128,206],"gene":[129,167,197],"set":[130,168,198],"linkage":[131],"analysis":[132],"(GSLA)":[133],"tool":[134],"developed":[136],"based":[137],"on":[138],"identify":[144],"potential":[146],"impacts":[148],"observed":[151],"transcriptomic":[152],"changes,":[153],"helping":[154],"elucidate":[156],"their":[157],"significance":[159],"complementing":[161],"currently":[163],"widely":[164,195],"used":[165,196],"enrichment-based":[166],"interpretation":[169],"tools.":[170],"A":[171],"case":[172],"study":[173],"shows":[174],"annotations":[177],"reported":[178],"by":[179,193],"V2/GSLA":[182],"system":[183],"more":[185],"comprehensive":[186],"concise":[188],"compared":[189],"obtained":[192],"annotation":[199],"tools":[200],"such":[201],"as":[202],"PANTHER":[203],"DAVID.":[205],"GSLA":[210],"available":[212],"http://human.biomedtzc.cn.":[214]},"counts_by_year":[{"year":2024,"cited_by_count":2},{"year":2022,"cited_by_count":3}],"updated_date":"2025-11-06T03:46:38.306776","created_date":"2025-10-10T00:00:00"}
