{"id":"https://openalex.org/W3013967177","doi":"https://doi.org/10.1093/database/baaa021","title":"FerrDb: a manually curated resource for regulators and markers of ferroptosis and ferroptosis-disease associations","display_name":"FerrDb: a manually curated resource for regulators and markers of ferroptosis and ferroptosis-disease associations","publication_year":2020,"publication_date":"2020-01-01","ids":{"openalex":"https://openalex.org/W3013967177","doi":"https://doi.org/10.1093/database/baaa021","mag":"3013967177","pmid":"https://pubmed.ncbi.nlm.nih.gov/32219413"},"language":"en","primary_location":{"id":"doi:10.1093/database/baaa021","is_oa":true,"landing_page_url":"https://doi.org/10.1093/database/baaa021","pdf_url":"https://academic.oup.com/database/article-pdf/doi/10.1093/database/baaa021/32972598/baaa021.pdf","source":{"id":"https://openalex.org/S4210201630","display_name":"Database","issn_l":"1758-0463","issn":["1758-0463"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311647","host_organization_name":"University of Oxford","host_organization_lineage":["https://openalex.org/P4310311647"],"host_organization_lineage_names":["University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Database","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://academic.oup.com/database/article-pdf/doi/10.1093/database/baaa021/32972598/baaa021.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5100665196","display_name":"Nan Zhou","orcid":"https://orcid.org/0000-0002-0393-316X"},"institutions":[{"id":"https://openalex.org/I92039509","display_name":"Guangzhou Medical University","ror":"https://ror.org/00zat6v61","country_code":"CN","type":"education","lineage":["https://openalex.org/I92039509"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Nan Zhou","raw_affiliation_strings":["Affiliated Brain Hospital of Guangzhou Medical University, 36 Mingxin Rd, Guangzhou, 510370, China","Guangdong Engineering Technology Research Center for Translational Medicine of Mental Disorders, 36 Mingxin Rd, Guangzhou, 510370, China","Guangzhou Huiai Hospital, 36 Mingxin Rd, Guangzhou, 510370, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Affiliated Brain Hospital of Guangzhou Medical University, 36 Mingxin Rd, Guangzhou, 510370, China","institution_ids":["https://openalex.org/I92039509"]},{"raw_affiliation_string":"Guangdong Engineering Technology Research Center for Translational Medicine of Mental Disorders, 36 Mingxin Rd, Guangzhou, 510370, China","institution_ids":[]},{"raw_affiliation_string":"Guangzhou Huiai Hospital, 36 Mingxin Rd, Guangzhou, 510370, China","institution_ids":[]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5101907721","display_name":"Jinku Bao","orcid":"https://orcid.org/0000-0002-0096-7428"},"institutions":[{"id":"https://openalex.org/I24185976","display_name":"Sichuan University","ror":"https://ror.org/011ashp19","country_code":"CN","type":"education","lineage":["https://openalex.org/I24185976"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Jinku Bao","raw_affiliation_strings":["Key Laboratory of the State Ministry of Education for Bio-Resources and Ecologic Environment, College of Life Sciences, Sichuan University, 29 Wangjiang Rd, Chengdu, 610064, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Key Laboratory of the State Ministry of Education for Bio-Resources and Ecologic Environment, College of Life Sciences, Sichuan University, 29 Wangjiang Rd, Chengdu, 610064, China","institution_ids":["https://openalex.org/I24185976"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":2,"corresponding_author_ids":["https://openalex.org/A5101907721"],"corresponding_institution_ids":["https://openalex.org/I24185976"],"apc_list":{"value":2729,"currency":"USD","value_usd":2729},"apc_paid":{"value":2729,"currency":"USD","value_usd":2729},"fwci":65.8708,"has_fulltext":true,"cited_by_count":841,"citation_normalized_percentile":{"value":0.99921954,"is_in_top_1_percent":true,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":98,"max":100},"biblio":{"volume":"2020","issue":null,"first_page":null,"last_page":null},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11297","display_name":"Ferroptosis and cancer prognosis","score":0.9984999895095825,"subfield":{"id":"https://openalex.org/subfields/2740","display_name":"Pulmonary and Respiratory Medicine"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},"topics":[{"id":"https://openalex.org/T11297","display_name":"Ferroptosis and cancer prognosis","score":0.9984999895095825,"subfield":{"id":"https://openalex.org/subfields/2740","display_name":"Pulmonary and Respiratory Medicine"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T14364","display_name":"Clusterin in disease pathology","score":0.00019999999494757503,"subfield":{"id":"https://openalex.org/subfields/2730","display_name":"Oncology"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T11313","display_name":"Immune cells in cancer","score":9.999999747378752e-05,"subfield":{"id":"https://openalex.org/subfields/2403","display_name":"Immunology"},"field":{"id":"https://openalex.org/fields/24","display_name":"Immunology and Microbiology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/disease","display_name":"Disease","score":0.5839152932167053},{"id":"https://openalex.org/keywords/resource","display_name":"Resource (disambiguation)","score":0.44732755422592163},{"id":"https://openalex.org/keywords/database","display_name":"Database","score":0.4033738374710083},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.369770348072052},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.3634924292564392},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.3292912244796753},{"id":"https://openalex.org/keywords/bioinformatics","display_name":"Bioinformatics","score":0.327202707529068},{"id":"https://openalex.org/keywords/medicine","display_name":"Medicine","score":0.18719780445098877}],"concepts":[{"id":"https://openalex.org/C2779134260","wikidata":"https://www.wikidata.org/wiki/Q12136","display_name":"Disease","level":2,"score":0.5839152932167053},{"id":"https://openalex.org/C206345919","wikidata":"https://www.wikidata.org/wiki/Q20380951","display_name":"Resource (disambiguation)","level":2,"score":0.44732755422592163},{"id":"https://openalex.org/C77088390","wikidata":"https://www.wikidata.org/wiki/Q8513","display_name":"Database","level":1,"score":0.4033738374710083},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.369770348072052},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.3634924292564392},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.3292912244796753},{"id":"https://openalex.org/C60644358","wikidata":"https://www.wikidata.org/wiki/Q128570","display_name":"Bioinformatics","level":1,"score":0.327202707529068},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.18719780445098877},{"id":"https://openalex.org/C31258907","wikidata":"https://www.wikidata.org/wiki/Q1301371","display_name":"Computer network","level":1,"score":0.0},{"id":"https://openalex.org/C142724271","wikidata":"https://www.wikidata.org/wiki/Q7208","display_name":"Pathology","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D000079403","descriptor_name":"Ferroptosis","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D000079403","descriptor_name":"Ferroptosis","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D000079403","descriptor_name":"Ferroptosis","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D007501","descriptor_name":"Iron","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D007501","descriptor_name":"Iron","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D007501","descriptor_name":"Iron","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D009369","descriptor_name":"Neoplasms","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D009369","descriptor_name":"Neoplasms","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D009369","descriptor_name":"Neoplasms","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D009369","descriptor_name":"Neoplasms","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D009369","descriptor_name":"Neoplasms","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D009369","descriptor_name":"Neoplasms","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D015415","descriptor_name":"Biomarkers","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D015415","descriptor_name":"Biomarkers","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D015415","descriptor_name":"Biomarkers","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D016208","descriptor_name":"Databases, Factual","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016208","descriptor_name":"Databases, Factual","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016208","descriptor_name":"Databases, Factual","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D017209","descriptor_name":"Apoptosis","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D017209","descriptor_name":"Apoptosis","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D017209","descriptor_name":"Apoptosis","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D017382","descriptor_name":"Reactive Oxygen Species","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D017382","descriptor_name":"Reactive Oxygen Species","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D017382","descriptor_name":"Reactive Oxygen Species","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D020022","descriptor_name":"Genetic Predisposition to Disease","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D020022","descriptor_name":"Genetic Predisposition to Disease","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D020022","descriptor_name":"Genetic Predisposition to Disease","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D053263","descriptor_name":"Gene Regulatory Networks","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D053263","descriptor_name":"Gene Regulatory Networks","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D053263","descriptor_name":"Gene Regulatory Networks","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D057225","descriptor_name":"Data Mining","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D057225","descriptor_name":"Data Mining","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D057225","descriptor_name":"Data Mining","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D058977","descriptor_name":"Molecular Sequence Annotation","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D058977","descriptor_name":"Molecular Sequence Annotation","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D058977","descriptor_name":"Molecular Sequence Annotation","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D066289","descriptor_name":"Data Curation","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D066289","descriptor_name":"Data Curation","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D066289","descriptor_name":"Data Curation","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false}],"locations_count":3,"locations":[{"id":"doi:10.1093/database/baaa021","is_oa":true,"landing_page_url":"https://doi.org/10.1093/database/baaa021","pdf_url":"https://academic.oup.com/database/article-pdf/doi/10.1093/database/baaa021/32972598/baaa021.pdf","source":{"id":"https://openalex.org/S4210201630","display_name":"Database","issn_l":"1758-0463","issn":["1758-0463"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311647","host_organization_name":"University of Oxford","host_organization_lineage":["https://openalex.org/P4310311647"],"host_organization_lineage_names":["University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Database","raw_type":"journal-article"},{"id":"pmid:32219413","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/32219413","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Database : the journal of biological databases and curation","raw_type":"Journal Article"},{"id":"pmh:oai:pubmedcentral.nih.gov:7100629","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/7100629","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Database (Oxford)","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1093/database/baaa021","is_oa":true,"landing_page_url":"https://doi.org/10.1093/database/baaa021","pdf_url":"https://academic.oup.com/database/article-pdf/doi/10.1093/database/baaa021/32972598/baaa021.pdf","source":{"id":"https://openalex.org/S4210201630","display_name":"Database","issn_l":"1758-0463","issn":["1758-0463"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311647","host_organization_name":"University of Oxford","host_organization_lineage":["https://openalex.org/P4310311647"],"host_organization_lineage_names":["University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Database","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G3099053822","display_name":null,"funder_award_id":"201805010009","funder_id":"https://openalex.org/F4320316330","funder_display_name":"Guangzhou Municipal Psychiatric Disease Clinical Transformation Laboratory"}],"funders":[{"id":"https://openalex.org/F4320316330","display_name":"Guangzhou Municipal Psychiatric Disease Clinical Transformation Laboratory","ror":null}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W3013967177.pdf","grobid_xml":"https://content.openalex.org/works/W3013967177.grobid-xml"},"referenced_works_count":16,"referenced_works":["https://openalex.org/W585341442","https://openalex.org/W1513392008","https://openalex.org/W1943418449","https://openalex.org/W1997128330","https://openalex.org/W1997183854","https://openalex.org/W2002490399","https://openalex.org/W2065934830","https://openalex.org/W2085682228","https://openalex.org/W2094942223","https://openalex.org/W2179127114","https://openalex.org/W2189205651","https://openalex.org/W2745520112","https://openalex.org/W2803347838","https://openalex.org/W2892710900","https://openalex.org/W2902345528","https://openalex.org/W2947494849"],"related_works":["https://openalex.org/W2003932708","https://openalex.org/W1967424056","https://openalex.org/W2284877871","https://openalex.org/W2138102289","https://openalex.org/W868043274","https://openalex.org/W2513523087","https://openalex.org/W1187916458","https://openalex.org/W2111650087","https://openalex.org/W1143447605","https://openalex.org/W1995085194"],"abstract_inverted_index":{"Ferroptosis":[0,23,114],"is":[1,24,42,79,100,187],"a":[2,28,47,93,171],"mode":[3],"of":[4,18,30,46,50,62,72,97,163],"regulated":[5],"cell":[6],"death":[7],"that":[8],"depends":[9],"on":[10],"iron.":[11],"Cells":[12],"die":[13],"from":[14,110,123],"the":[15,60,111,154],"toxic":[16],"accumulation":[17],"lipid":[19],"reactive":[20],"oxygen":[21],"species.":[22],"tightly":[25],"linked":[26],"to":[27,81,84,182,189],"variety":[29],"human":[31],"diseases,":[32],"such":[33],"as":[34],"cancers":[35],"and":[36,44,52,76,86,116,118,126,139,144,161,165,174],"degenerative":[37],"diseases.":[38],"The":[39,168],"ferroptotic":[40],"process":[41],"complicated":[43],"consists":[45],"wide":[48],"range":[49],"metabolites":[51],"biomolecules.":[53],"Although":[54],"great":[55],"progress":[56],"has":[57,170],"been":[58],"achieved,":[59],"mechanism":[61],"ferroptosis":[63,98,108,164],"remains":[64],"enigmatic.":[65],"We":[66,90,150],"have":[67,91],"currently":[68],"entered":[69],"an":[70],"era":[71],"extensive":[73],"knowledge":[74,95],"advancement,":[75],"thus,":[77],"it":[78,175],"important":[80],"find":[82],"ways":[83],"organize":[85],"utilize":[87],"data":[88],"efficiently.":[89],"observed":[92],"high-quality":[94],"base":[96],"research":[99],"lacking.":[101],"In":[102,128],"this":[103],"study,":[104],"we":[105],"downloaded":[106],"784":[107],"articles":[109,125],"PubMed":[112],"database.":[113],"regulators":[115,131,160],"markers":[117,143,162],"associated":[119],"diseases":[120],"were":[121,148],"extracted":[122],"these":[124],"annotated.":[127],"summary,":[129],"253":[130],"(including":[132],"108":[133],"drivers,":[134],"69":[135],"suppressors,":[136],"35":[137],"inducers":[138],"41":[140],"inhibitors),":[141],"111":[142],"95":[145],"ferroptosis-disease":[146,166],"associations":[147],"found.":[149],"then":[151],"developed":[152],"FerrDb,":[153],"first":[155],"manually":[156],"curated":[157],"database":[158,169],"for":[159],"associations.":[167],"user-friendly":[172],"interface,":[173],"will":[176],"be":[177],"updated":[178],"every":[179],"6":[180],"months":[181],"offer":[183],"long-term":[184],"service.":[185],"FerrDb":[186],"expected":[188],"help":[190],"researchers":[191],"acquire":[192],"insights":[193],"into":[194],"ferroptosis.":[195],"Database":[196],"URL:":[197],"http://www.zhounan.org/ferrdb.":[198]},"counts_by_year":[{"year":2026,"cited_by_count":39},{"year":2025,"cited_by_count":76},{"year":2024,"cited_by_count":153},{"year":2023,"cited_by_count":163},{"year":2022,"cited_by_count":279},{"year":2021,"cited_by_count":125},{"year":2020,"cited_by_count":6}],"updated_date":"2026-08-26T07:47:46.906454","created_date":"2025-10-10T00:00:00"}
