{"id":"https://openalex.org/W3011372919","doi":"https://doi.org/10.1093/database/baaa013","title":"TeaMiD: a comprehensive database of simple sequence repeat markers of tea","display_name":"TeaMiD: a comprehensive database of simple sequence repeat markers of tea","publication_year":2020,"publication_date":"2020-01-01","ids":{"openalex":"https://openalex.org/W3011372919","doi":"https://doi.org/10.1093/database/baaa013","mag":"3011372919","pmid":"https://pubmed.ncbi.nlm.nih.gov/32159215"},"language":"en","primary_location":{"id":"doi:10.1093/database/baaa013","is_oa":true,"landing_page_url":"https://doi.org/10.1093/database/baaa013","pdf_url":"https://academic.oup.com/database/article-pdf/doi/10.1093/database/baaa013/32890523/baaa013.pdf","source":{"id":"https://openalex.org/S4210201630","display_name":"Database","issn_l":"1758-0463","issn":["1758-0463"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311647","host_organization_name":"University of Oxford","host_organization_lineage":["https://openalex.org/P4310311647"],"host_organization_lineage_names":["University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Database","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://academic.oup.com/database/article-pdf/doi/10.1093/database/baaa013/32890523/baaa013.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5035231147","display_name":"Himanshu Dubey","orcid":"https://orcid.org/0000-0002-3439-7718"},"institutions":[{"id":"https://openalex.org/I45509622","display_name":"Indian Agricultural Research Institute","ror":"https://ror.org/01bzgdw81","country_code":"IN","type":"facility","lineage":["https://openalex.org/I179420787","https://openalex.org/I45509622"]}],"countries":["IN"],"is_corresponding":false,"raw_author_name":"Himanshu Dubey","raw_affiliation_strings":["Indian Council Agricultural Research-National Institute for Plant Biotechnology, Lal Bahadur Sashtri Centre, Indian Agricultural Research Institute, Pusa, New Delhi 110012, India"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Indian Council Agricultural Research-National Institute for Plant Biotechnology, Lal Bahadur Sashtri Centre, Indian Agricultural Research Institute, Pusa, New Delhi 110012, India","institution_ids":["https://openalex.org/I45509622"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5031636481","display_name":"Hukam C. Rawal","orcid":"https://orcid.org/0000-0002-2727-9721"},"institutions":[{"id":"https://openalex.org/I45509622","display_name":"Indian Agricultural Research Institute","ror":"https://ror.org/01bzgdw81","country_code":"IN","type":"facility","lineage":["https://openalex.org/I179420787","https://openalex.org/I45509622"]}],"countries":["IN"],"is_corresponding":false,"raw_author_name":"Hukam C Rawal","raw_affiliation_strings":["Indian Council Agricultural Research-National Institute for Plant Biotechnology, Lal Bahadur Sashtri Centre, Indian Agricultural Research Institute, Pusa, New Delhi 110012, India"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Indian Council Agricultural Research-National Institute for Plant Biotechnology, Lal Bahadur Sashtri Centre, Indian Agricultural Research Institute, Pusa, New Delhi 110012, India","institution_ids":["https://openalex.org/I45509622"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5009386816","display_name":"Megha Rohilla","orcid":"https://orcid.org/0009-0005-4169-4680"},"institutions":[{"id":"https://openalex.org/I45509622","display_name":"Indian Agricultural Research Institute","ror":"https://ror.org/01bzgdw81","country_code":"IN","type":"facility","lineage":["https://openalex.org/I179420787","https://openalex.org/I45509622"]}],"countries":["IN"],"is_corresponding":false,"raw_author_name":"Megha Rohilla","raw_affiliation_strings":["Indian Council Agricultural Research-National Institute for Plant Biotechnology, Lal Bahadur Sashtri Centre, Indian Agricultural Research Institute, Pusa, New Delhi 110012, India"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Indian Council Agricultural Research-National Institute for Plant Biotechnology, Lal Bahadur Sashtri Centre, Indian Agricultural Research Institute, Pusa, New Delhi 110012, India","institution_ids":["https://openalex.org/I45509622"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5010502628","display_name":"Urvashi Lama","orcid":"https://orcid.org/0000-0002-1909-0275"},"institutions":[{"id":"https://openalex.org/I4210144812","display_name":"Tea Research Association","ror":"https://ror.org/04eq5c702","country_code":"IN","type":"other","lineage":["https://openalex.org/I4210144812"]}],"countries":["IN"],"is_corresponding":false,"raw_author_name":"Urvashi Lama","raw_affiliation_strings":["Darjeeling Tea Research and Development Centre, Tea Board, Ministry of Commerce, B.T.M. Sarani (Brabourne Road), Kolkata, West Bengal 700001, India"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Darjeeling Tea Research and Development Centre, Tea Board, Ministry of Commerce, B.T.M. Sarani (Brabourne Road), Kolkata, West Bengal 700001, India","institution_ids":["https://openalex.org/I4210144812"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5051060444","display_name":"Praveen Kumar","orcid":"https://orcid.org/0000-0001-7977-1075"},"institutions":[{"id":"https://openalex.org/I4210144812","display_name":"Tea Research Association","ror":"https://ror.org/04eq5c702","country_code":"IN","type":"other","lineage":["https://openalex.org/I4210144812"]}],"countries":["IN"],"is_corresponding":false,"raw_author_name":"P Mohan Kumar","raw_affiliation_strings":["Darjeeling Tea Research and Development Centre, Tea Board, Ministry of Commerce, B.T.M. Sarani (Brabourne Road), Kolkata, West Bengal 700001, India"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Darjeeling Tea Research and Development Centre, Tea Board, Ministry of Commerce, B.T.M. Sarani (Brabourne Road), Kolkata, West Bengal 700001, India","institution_ids":["https://openalex.org/I4210144812"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5108611771","display_name":"Tanoy Bandyopadhyay","orcid":null},"institutions":[{"id":"https://openalex.org/I4210144812","display_name":"Tea Research Association","ror":"https://ror.org/04eq5c702","country_code":"IN","type":"other","lineage":["https://openalex.org/I4210144812"]}],"countries":["IN"],"is_corresponding":false,"raw_author_name":"Tanoy Bandyopadhyay","raw_affiliation_strings":["Department of Biotechnology, Tocklai Experimental Station, Tea Research Association, Jorhat, Assam, India"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Biotechnology, Tocklai Experimental Station, Tea Research Association, Jorhat, Assam, India","institution_ids":["https://openalex.org/I4210144812"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5112417213","display_name":"Madhurjya Gogoi","orcid":null},"institutions":[{"id":"https://openalex.org/I4210144812","display_name":"Tea Research Association","ror":"https://ror.org/04eq5c702","country_code":"IN","type":"other","lineage":["https://openalex.org/I4210144812"]}],"countries":["IN"],"is_corresponding":false,"raw_author_name":"Madhurjya Gogoi","raw_affiliation_strings":["Department of Biotechnology, Tocklai Experimental Station, Tea Research Association, Jorhat, Assam, India"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Biotechnology, Tocklai Experimental Station, Tea Research Association, Jorhat, Assam, India","institution_ids":["https://openalex.org/I4210144812"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100776447","display_name":"Nagendra Kumar Singh","orcid":"https://orcid.org/0000-0002-7753-8517"},"institutions":[{"id":"https://openalex.org/I45509622","display_name":"Indian Agricultural Research Institute","ror":"https://ror.org/01bzgdw81","country_code":"IN","type":"facility","lineage":["https://openalex.org/I179420787","https://openalex.org/I45509622"]}],"countries":["IN"],"is_corresponding":false,"raw_author_name":"Nagendra Kumar Singh","raw_affiliation_strings":["Indian Council Agricultural Research-National Institute for Plant Biotechnology, Lal Bahadur Sashtri Centre, Indian Agricultural Research Institute, Pusa, New Delhi 110012, India"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Indian Council Agricultural Research-National Institute for Plant Biotechnology, Lal Bahadur Sashtri Centre, Indian Agricultural Research Institute, Pusa, New Delhi 110012, India","institution_ids":["https://openalex.org/I45509622"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5072869105","display_name":"Tapan Kumar Mondal","orcid":"https://orcid.org/0000-0002-4166-5821"},"institutions":[{"id":"https://openalex.org/I45509622","display_name":"Indian Agricultural Research Institute","ror":"https://ror.org/01bzgdw81","country_code":"IN","type":"facility","lineage":["https://openalex.org/I179420787","https://openalex.org/I45509622"]}],"countries":["IN"],"is_corresponding":true,"raw_author_name":"Tapan Kumar Mondal","raw_affiliation_strings":["Indian Council Agricultural Research-National Institute for Plant Biotechnology, Lal Bahadur Sashtri Centre, Indian Agricultural Research Institute, Pusa, New Delhi 110012, India"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Indian Council Agricultural Research-National Institute for Plant Biotechnology, Lal Bahadur Sashtri Centre, Indian Agricultural Research Institute, Pusa, New Delhi 110012, India","institution_ids":["https://openalex.org/I45509622"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":9,"corresponding_author_ids":["https://openalex.org/A5072869105"],"corresponding_institution_ids":["https://openalex.org/I45509622"],"apc_list":{"value":1415,"currency":"GBP","value_usd":1735},"apc_paid":{"value":1415,"currency":"GBP","value_usd":1735},"fwci":2.5541,"has_fulltext":true,"cited_by_count":27,"citation_normalized_percentile":{"value":0.89175853,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":96,"max":99},"biblio":{"volume":"2020","issue":null,"first_page":null,"last_page":null},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10825","display_name":"Plant Pathogens and Fungal Diseases","score":0.9930999875068665,"subfield":{"id":"https://openalex.org/subfields/1307","display_name":"Cell Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10825","display_name":"Plant Pathogens and Fungal Diseases","score":0.9930999875068665,"subfield":{"id":"https://openalex.org/subfields/1307","display_name":"Cell Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11411","display_name":"Tea Polyphenols and Effects","score":0.991599977016449,"subfield":{"id":"https://openalex.org/subfields/2734","display_name":"Pathology and Forensic Medicine"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T13220","display_name":"Plant and Fungal Interactions Research","score":0.9847000241279602,"subfield":{"id":"https://openalex.org/subfields/1310","display_name":"Endocrinology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.6895773410797119},{"id":"https://openalex.org/keywords/microsatellite","display_name":"Microsatellite","score":0.6644799113273621},{"id":"https://openalex.org/keywords/genome","display_name":"Genome","score":0.6481806039810181},{"id":"https://openalex.org/keywords/expressed-sequence-tag","display_name":"Expressed sequence tag","score":0.6002798676490784},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.48600587248802185},{"id":"https://openalex.org/keywords/molecular-breeding","display_name":"Molecular breeding","score":0.46480241417884827},{"id":"https://openalex.org/keywords/loss-of-heterozygosity","display_name":"Loss of heterozygosity","score":0.4451954960823059},{"id":"https://openalex.org/keywords/locus","display_name":"Locus (genetics)","score":0.42948800325393677},{"id":"https://openalex.org/keywords/allele","display_name":"Allele","score":0.3646796941757202},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.12660062313079834}],"concepts":[{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.6895773410797119},{"id":"https://openalex.org/C61320498","wikidata":"https://www.wikidata.org/wiki/Q265193","display_name":"Microsatellite","level":4,"score":0.6644799113273621},{"id":"https://openalex.org/C141231307","wikidata":"https://www.wikidata.org/wiki/Q7020","display_name":"Genome","level":3,"score":0.6481806039810181},{"id":"https://openalex.org/C149034497","wikidata":"https://www.wikidata.org/wiki/Q1384835","display_name":"Expressed sequence tag","level":4,"score":0.6002798676490784},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.48600587248802185},{"id":"https://openalex.org/C169282265","wikidata":"https://www.wikidata.org/wiki/Q17145598","display_name":"Molecular breeding","level":3,"score":0.46480241417884827},{"id":"https://openalex.org/C143589142","wikidata":"https://www.wikidata.org/wiki/Q2617554","display_name":"Loss of heterozygosity","level":4,"score":0.4451954960823059},{"id":"https://openalex.org/C84597430","wikidata":"https://www.wikidata.org/wiki/Q106227","display_name":"Locus (genetics)","level":3,"score":0.42948800325393677},{"id":"https://openalex.org/C180754005","wikidata":"https://www.wikidata.org/wiki/Q80726","display_name":"Allele","level":3,"score":0.3646796941757202},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.12660062313079834}],"mesh":[{"descriptor_ui":"D000483","descriptor_name":"Alleles","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000483","descriptor_name":"Alleles","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000483","descriptor_name":"Alleles","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000483","descriptor_name":"Alleles","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D005819","descriptor_name":"Genetic Markers","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D005819","descriptor_name":"Genetic Markers","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D005819","descriptor_name":"Genetic Markers","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D005819","descriptor_name":"Genetic Markers","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D005838","descriptor_name":"Genotype","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D005838","descriptor_name":"Genotype","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D005838","descriptor_name":"Genotype","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D005838","descriptor_name":"Genotype","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011110","descriptor_name":"Polymorphism, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011110","descriptor_name":"Polymorphism, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011110","descriptor_name":"Polymorphism, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011110","descriptor_name":"Polymorphism, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D018745","descriptor_name":"Genome, Plant","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D018745","descriptor_name":"Genome, Plant","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D018745","descriptor_name":"Genome, Plant","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D018745","descriptor_name":"Genome, Plant","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D018895","descriptor_name":"Microsatellite Repeats","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D018895","descriptor_name":"Microsatellite Repeats","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D018895","descriptor_name":"Microsatellite Repeats","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D018895","descriptor_name":"Microsatellite Repeats","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D028241","descriptor_name":"Camellia sinensis","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D028241","descriptor_name":"Camellia sinensis","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D028241","descriptor_name":"Camellia sinensis","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D028241","descriptor_name":"Camellia sinensis","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D057225","descriptor_name":"Data Mining","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D057225","descriptor_name":"Data Mining","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D057225","descriptor_name":"Data Mining","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D057225","descriptor_name":"Data Mining","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false}],"locations_count":3,"locations":[{"id":"doi:10.1093/database/baaa013","is_oa":true,"landing_page_url":"https://doi.org/10.1093/database/baaa013","pdf_url":"https://academic.oup.com/database/article-pdf/doi/10.1093/database/baaa013/32890523/baaa013.pdf","source":{"id":"https://openalex.org/S4210201630","display_name":"Database","issn_l":"1758-0463","issn":["1758-0463"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311647","host_organization_name":"University of Oxford","host_organization_lineage":["https://openalex.org/P4310311647"],"host_organization_lineage_names":["University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Database","raw_type":"journal-article"},{"id":"pmid:32159215","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/32159215","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Database : the journal of biological databases and curation","raw_type":null},{"id":"pmh:oai:europepmc.org:6026965","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/7065459","pdf_url":null,"source":{"id":"https://openalex.org/S4306400806","display_name":"Europe PMC (PubMed Central)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1303153112","host_organization_name":"European Bioinformatics Institute","host_organization_lineage":["https://openalex.org/I1303153112"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1093/database/baaa013","is_oa":true,"landing_page_url":"https://doi.org/10.1093/database/baaa013","pdf_url":"https://academic.oup.com/database/article-pdf/doi/10.1093/database/baaa013/32890523/baaa013.pdf","source":{"id":"https://openalex.org/S4210201630","display_name":"Database","issn_l":"1758-0463","issn":["1758-0463"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311647","host_organization_name":"University of Oxford","host_organization_lineage":["https://openalex.org/P4310311647"],"host_organization_lineage_names":["University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Database","raw_type":"journal-article"},"sustainable_development_goals":[{"score":0.6299999952316284,"id":"https://metadata.un.org/sdg/15","display_name":"Life in Land"}],"awards":[],"funders":[{"id":"https://openalex.org/F4320320769","display_name":"Indian Council of Agricultural Research","ror":"https://ror.org/04fw54a43"},{"id":"https://openalex.org/F4320328424","display_name":"National Tea Research Foundation","ror":null}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W3011372919.pdf","grobid_xml":"https://content.openalex.org/works/W3011372919.grobid-xml"},"referenced_works_count":93,"referenced_works":["https://openalex.org/W42666890","https://openalex.org/W171251838","https://openalex.org/W181015565","https://openalex.org/W187349763","https://openalex.org/W288069062","https://openalex.org/W619970814","https://openalex.org/W636193631","https://openalex.org/W644273075","https://openalex.org/W757486820","https://openalex.org/W1165861608","https://openalex.org/W1607965150","https://openalex.org/W1803375514","https://openalex.org/W1901684011","https://openalex.org/W1968738531","https://openalex.org/W1977315418","https://openalex.org/W1986260377","https://openalex.org/W1986624421","https://openalex.org/W1986824038","https://openalex.org/W1988061496","https://openalex.org/W1994240301","https://openalex.org/W1995641775","https://openalex.org/W1997340531","https://openalex.org/W2019347787","https://openalex.org/W2020695647","https://openalex.org/W2024120935","https://openalex.org/W2033863253","https://openalex.org/W2047757095","https://openalex.org/W2055043387","https://openalex.org/W2059034204","https://openalex.org/W2063287107","https://openalex.org/W2073794181","https://openalex.org/W2074465029","https://openalex.org/W2085218213","https://openalex.org/W2099401758","https://openalex.org/W2101166532","https://openalex.org/W2102619694","https://openalex.org/W2105233565","https://openalex.org/W2112066361","https://openalex.org/W2114502309","https://openalex.org/W2120971697","https://openalex.org/W2124131884","https://openalex.org/W2126026538","https://openalex.org/W2135481052","https://openalex.org/W2138473156","https://openalex.org/W2142901387","https://openalex.org/W2157586922","https://openalex.org/W2162098634","https://openalex.org/W2164154943","https://openalex.org/W2166265186","https://openalex.org/W2168478565","https://openalex.org/W2172444247","https://openalex.org/W2176111476","https://openalex.org/W2188691262","https://openalex.org/W2200255921","https://openalex.org/W2225073809","https://openalex.org/W2278135306","https://openalex.org/W2321344857","https://openalex.org/W2329374018","https://openalex.org/W2329900418","https://openalex.org/W2334139117","https://openalex.org/W2337269474","https://openalex.org/W2352368840","https://openalex.org/W2463008186","https://openalex.org/W2472829779","https://openalex.org/W2490421613","https://openalex.org/W2492428334","https://openalex.org/W2508748745","https://openalex.org/W2510882339","https://openalex.org/W2610308012","https://openalex.org/W2624708804","https://openalex.org/W2626535872","https://openalex.org/W2734922660","https://openalex.org/W2766763339","https://openalex.org/W2768308516","https://openalex.org/W2783020430","https://openalex.org/W2800563766","https://openalex.org/W2802982144","https://openalex.org/W2897668586","https://openalex.org/W2902814063","https://openalex.org/W2911220501","https://openalex.org/W2922305128","https://openalex.org/W2924953903","https://openalex.org/W2942445556","https://openalex.org/W2958799256","https://openalex.org/W3170752457","https://openalex.org/W4242641176","https://openalex.org/W6622104442","https://openalex.org/W6627651301","https://openalex.org/W6638186065","https://openalex.org/W6685415385","https://openalex.org/W6687222439","https://openalex.org/W6695230662","https://openalex.org/W6796534853"],"related_works":["https://openalex.org/W1975299549","https://openalex.org/W2348751509","https://openalex.org/W1988340380","https://openalex.org/W2086717873","https://openalex.org/W2352675633","https://openalex.org/W1965726430","https://openalex.org/W2027506631","https://openalex.org/W2384927114","https://openalex.org/W2028392560","https://openalex.org/W2131839889"],"abstract_inverted_index":{"Tea":[0],"is":[1,25,50],"a":[2,12,19,26,114,131,162,188],"highly":[3],"cross-pollinated,":[4],"woody,":[5],"perennial":[6],"tree.":[7],"High":[8],"heterozygosity":[9],"combined":[10],"with":[11,32,140,169],"long":[13],"gestational":[14],"period":[15],"makes":[16],"conventional":[17,33],"breeding":[18,24],"cumbersome":[20],"process.":[21],"Therefore,":[22],"marker-assisted":[23],"better":[27],"alternative":[28],"approach":[29],"when":[30],"compared":[31],"breeding.":[34],"Considering":[35],"the":[36,58,71,74,81,122,154,179,198],"large":[37,65],"genome":[38],"size":[39],"of":[40,57,67,106,116,121,134,147,153,174,205,210],"tea":[41,61,107,135,167,206],"(~3":[42],"Gb),":[43],"information":[44,172,180],"about":[45],"simple":[46],"sequence":[47],"repeat":[48],"(SSR)":[49],"scanty.":[51],"Thus,":[52],"we":[53,77,185],"have":[54,186],"taken":[55],"advantage":[56],"recently":[59],"published":[60,100],"genomes":[62,93,204],"to":[63,102,142],"identify":[64],"numbers":[66],"SSR":[68,108,195],"markers":[69],"in":[70,165,182],"tea.":[72],"Besides":[73],"genomic":[75],"sequences,":[76],"identified":[78],"SSRs":[79,125],"from":[80,196],"other":[82],"publicly":[83],"available":[84],"sequences":[85,209],"such":[86],"as":[87],"RNA-seq,":[88],"GSS,":[89],"ESTs":[90],"and":[91,95,97,207],"organelle":[92],"(chloroplasts":[94],"mitochondrial)":[96],"also":[98],"searched":[99],"literature":[101],"catalog":[103],"validated":[104],"set":[105,133],"markers.":[109],"The":[110],"complete":[111],"exercise":[112],"yielded":[113],"total":[115,155],"935":[117],"547":[118],"SSRs.":[119],"Out":[120],"total,":[123],"82":[124],"were":[126,159],"selected":[127],"for":[128,161],"validation":[129],"among":[130],"diverse":[132],"genotypes.":[136],"Six":[137],"primers":[138,158],"(each":[139],"four":[141],"six":[143,199],"alleles,":[144],"an":[145],"average":[146],"five":[148],"alleles":[149],"per":[150],"locus)":[151],"out":[152],"27":[156],"polymorphic":[157,171],"used":[160],"diversity":[163],"analysis":[164],"36":[166],"genotypes":[168],"mean":[170],"content":[173],"0.61-0.76.":[175],"Finally,":[176],"using":[177],"all":[178,197],"generated":[181],"this":[183],"study,":[184],"developed":[187],"user-friendly":[189],"database":[190],"(TeaMiD;":[191],"http://indianteagenome.in:8080/teamid/)":[192],"that":[193],"hosts":[194],"resources":[200],"including":[201],"three":[202],"nuclear":[203],"transcriptome":[208],"17":[211],"Camellia":[212],"wild":[213],"species.":[214],"Database":[215],"URL:":[216],"http://indianteagenome.in:8080/teamid/.":[217]},"counts_by_year":[{"year":2024,"cited_by_count":4},{"year":2023,"cited_by_count":3},{"year":2022,"cited_by_count":5},{"year":2021,"cited_by_count":10},{"year":2020,"cited_by_count":5}],"updated_date":"2026-05-21T06:26:12.895304","created_date":"2025-10-10T00:00:00"}
