{"id":"https://openalex.org/W4400397376","doi":"https://doi.org/10.1093/comjnl/bxae058","title":"COVID-19 virus mutation prediction with LSTM and attention mechanisms","display_name":"COVID-19 virus mutation prediction with LSTM and attention mechanisms","publication_year":2024,"publication_date":"2024-06-21","ids":{"openalex":"https://openalex.org/W4400397376","doi":"https://doi.org/10.1093/comjnl/bxae058"},"language":"en","primary_location":{"id":"doi:10.1093/comjnl/bxae058","is_oa":false,"landing_page_url":"https://doi.org/10.1093/comjnl/bxae058","pdf_url":null,"source":{"id":"https://openalex.org/S44643521","display_name":"The Computer Journal","issn_l":"0010-4620","issn":["0010-4620","1460-2067"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"The Computer Journal","raw_type":"journal-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5034943146","display_name":"Mehmet Burukanl\u0131","orcid":"https://orcid.org/0000-0003-4459-0455"},"institutions":[{"id":"https://openalex.org/I103703290","display_name":"Sakarya University","ror":"https://ror.org/04ttnw109","country_code":"TR","type":"education","lineage":["https://openalex.org/I103703290"]},{"id":"https://openalex.org/I41055640","display_name":"Bitlis Eren University","ror":"https://ror.org/00mm4ys28","country_code":"TR","type":"education","lineage":["https://openalex.org/I41055640"]}],"countries":["TR"],"is_corresponding":true,"raw_author_name":"Mehmet Burukanli","raw_affiliation_strings":["Bitlis Eren University , Department of Common Courses, , Ahmet Eren Boulevard, 13100, Bitlis ,","Faculty of Computer and Information Sciences, Department of Computer Engineering, Sakarya University , Serdivan, 54050, Sakarya ,","Rectorate , Department of Common Courses, , Ahmet Eren Boulevard, 13100, Bitlis ,","Rectorate, Department of Common Courses, Bitlis Eren University, Ahmet Eren Boulevard, 13100, Bitlis, Turkey","Faculty of Computer and Information Sciences, Department of Computer Engineering, Sakarya University, Serdivan, 54050, Sakarya, Turkey"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Bitlis Eren University , Department of Common Courses, , Ahmet Eren Boulevard, 13100, Bitlis ,","institution_ids":["https://openalex.org/I41055640"]},{"raw_affiliation_string":"Faculty of Computer and Information Sciences, Department of Computer Engineering, Sakarya University , Serdivan, 54050, Sakarya ,","institution_ids":["https://openalex.org/I103703290"]},{"raw_affiliation_string":"Rectorate , Department of Common Courses, , Ahmet Eren Boulevard, 13100, Bitlis ,","institution_ids":["https://openalex.org/I41055640"]},{"raw_affiliation_string":"Rectorate, Department of Common Courses, Bitlis Eren University, Ahmet Eren Boulevard, 13100, Bitlis, Turkey","institution_ids":["https://openalex.org/I41055640"]},{"raw_affiliation_string":"Faculty of Computer and Information Sciences, Department of Computer Engineering, Sakarya University, Serdivan, 54050, Sakarya, Turkey","institution_ids":["https://openalex.org/I103703290"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5022944830","display_name":"Nejat Yumu\u015fak","orcid":"https://orcid.org/0000-0001-5005-8604"},"institutions":[{"id":"https://openalex.org/I103703290","display_name":"Sakarya University","ror":"https://ror.org/04ttnw109","country_code":"TR","type":"education","lineage":["https://openalex.org/I103703290"]}],"countries":["TR"],"is_corresponding":false,"raw_author_name":"Nejat Yumu\u015fak","raw_affiliation_strings":["Faculty of Computer and Information Sciences, Department of Computer Engineering, Sakarya University , Serdivan, 54050, Sakarya ,","Faculty of Computer and Information Sciences, Department of Computer Engineering, Sakarya University, Serdivan, 54050, Sakarya, Turkey"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Faculty of Computer and Information Sciences, Department of Computer Engineering, Sakarya University , Serdivan, 54050, Sakarya ,","institution_ids":["https://openalex.org/I103703290"]},{"raw_affiliation_string":"Faculty of Computer and Information Sciences, Department of Computer Engineering, Sakarya University, Serdivan, 54050, Sakarya, Turkey","institution_ids":["https://openalex.org/I103703290"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":2,"corresponding_author_ids":["https://openalex.org/A5034943146"],"corresponding_institution_ids":["https://openalex.org/I103703290","https://openalex.org/I41055640"],"apc_list":{"value":2635,"currency":"GBP","value_usd":3232},"apc_paid":null,"fwci":1.3551,"has_fulltext":false,"cited_by_count":4,"citation_normalized_percentile":{"value":0.808773,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":91,"max":97},"biblio":{"volume":"67","issue":"10","first_page":"2934","last_page":"2944"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11775","display_name":"COVID-19 diagnosis using AI","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/2741","display_name":"Radiology, Nuclear Medicine and Imaging"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},"topics":[{"id":"https://openalex.org/T11775","display_name":"COVID-19 diagnosis using AI","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/2741","display_name":"Radiology, Nuclear Medicine and Imaging"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T13702","display_name":"Machine Learning in Healthcare","score":0.9937000274658203,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T11512","display_name":"Anomaly Detection Techniques and Applications","score":0.9929999709129333,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/coronavirus-disease-2019","display_name":"Coronavirus disease 2019 (COVID-19)","score":0.7785394787788391},{"id":"https://openalex.org/keywords/mutation","display_name":"Mutation","score":0.5921314358711243},{"id":"https://openalex.org/keywords/virology","display_name":"Virology","score":0.5654386281967163},{"id":"https://openalex.org/keywords/2019-20-coronavirus-outbreak","display_name":"2019-20 coronavirus outbreak","score":0.54543137550354},{"id":"https://openalex.org/keywords/severe-acute-respiratory-syndrome-coronavirus-2","display_name":"Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2)","score":0.5374501347541809},{"id":"https://openalex.org/keywords/virus","display_name":"Virus","score":0.41279366612434387},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.37237149477005005},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.35928863286972046},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.32922303676605225},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.3194611072540283},{"id":"https://openalex.org/keywords/medicine","display_name":"Medicine","score":0.31664860248565674},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.12248027324676514},{"id":"https://openalex.org/keywords/internal-medicine","display_name":"Internal medicine","score":0.11668086051940918}],"concepts":[{"id":"https://openalex.org/C3008058167","wikidata":"https://www.wikidata.org/wiki/Q84263196","display_name":"Coronavirus disease 2019 (COVID-19)","level":4,"score":0.7785394787788391},{"id":"https://openalex.org/C501734568","wikidata":"https://www.wikidata.org/wiki/Q42918","display_name":"Mutation","level":3,"score":0.5921314358711243},{"id":"https://openalex.org/C159047783","wikidata":"https://www.wikidata.org/wiki/Q7215","display_name":"Virology","level":1,"score":0.5654386281967163},{"id":"https://openalex.org/C3006700255","wikidata":"https://www.wikidata.org/wiki/Q81068910","display_name":"2019-20 coronavirus outbreak","level":3,"score":0.54543137550354},{"id":"https://openalex.org/C3007834351","wikidata":"https://www.wikidata.org/wiki/Q82069695","display_name":"Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2)","level":5,"score":0.5374501347541809},{"id":"https://openalex.org/C2522874641","wikidata":"https://www.wikidata.org/wiki/Q808","display_name":"Virus","level":2,"score":0.41279366612434387},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.37237149477005005},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.35928863286972046},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.32922303676605225},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.3194611072540283},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.31664860248565674},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.12248027324676514},{"id":"https://openalex.org/C126322002","wikidata":"https://www.wikidata.org/wiki/Q11180","display_name":"Internal medicine","level":1,"score":0.11668086051940918},{"id":"https://openalex.org/C116675565","wikidata":"https://www.wikidata.org/wiki/Q3241045","display_name":"Outbreak","level":2,"score":0.0},{"id":"https://openalex.org/C524204448","wikidata":"https://www.wikidata.org/wiki/Q788926","display_name":"Infectious disease (medical specialty)","level":3,"score":0.0},{"id":"https://openalex.org/C2779134260","wikidata":"https://www.wikidata.org/wiki/Q12136","display_name":"Disease","level":2,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1093/comjnl/bxae058","is_oa":false,"landing_page_url":"https://doi.org/10.1093/comjnl/bxae058","pdf_url":null,"source":{"id":"https://openalex.org/S44643521","display_name":"The Computer Journal","issn_l":"0010-4620","issn":["0010-4620","1460-2067"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"The Computer Journal","raw_type":"journal-article"}],"best_oa_location":null,"sustainable_development_goals":[{"id":"https://metadata.un.org/sdg/3","display_name":"Good health and well-being","score":0.8199999928474426}],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":36,"referenced_works":["https://openalex.org/W1501531009","https://openalex.org/W1591801644","https://openalex.org/W2064675550","https://openalex.org/W2159294971","https://openalex.org/W2747329762","https://openalex.org/W2899771611","https://openalex.org/W2911964244","https://openalex.org/W3003415212","https://openalex.org/W3010223921","https://openalex.org/W3010699833","https://openalex.org/W3012189167","https://openalex.org/W3041176193","https://openalex.org/W3087441472","https://openalex.org/W3127420938","https://openalex.org/W3130153679","https://openalex.org/W3143978330","https://openalex.org/W3157506437","https://openalex.org/W3165397005","https://openalex.org/W3205316831","https://openalex.org/W4206126747","https://openalex.org/W4220795911","https://openalex.org/W4239510810","https://openalex.org/W4306896991","https://openalex.org/W4311278799","https://openalex.org/W4376142162","https://openalex.org/W4385245566","https://openalex.org/W4385570397","https://openalex.org/W4391097243","https://openalex.org/W6635446068","https://openalex.org/W6640212811","https://openalex.org/W6683272254","https://openalex.org/W6739901393","https://openalex.org/W6756040250","https://openalex.org/W6795140394","https://openalex.org/W6860587694","https://openalex.org/W6864424756"],"related_works":["https://openalex.org/W3036314732","https://openalex.org/W3009669391","https://openalex.org/W4382894326","https://openalex.org/W3171943759","https://openalex.org/W3176864053","https://openalex.org/W4206669628","https://openalex.org/W4292098121","https://openalex.org/W3154141118","https://openalex.org/W4388896133","https://openalex.org/W3031607536"],"abstract_inverted_index":{"Abstract":[0],"Coronavirus":[1,11],"disease":[2],"2019":[3],"(COVID-19),":[4],"caused":[5],"by":[6,170],"Severe":[7],"Acute":[8],"Respiratory":[9],"Syndrome":[10],"2,":[12],"is":[13,57],"an":[14,135],"emerging":[15],"and":[16,73],"rapidly":[17],"spreading":[18],"type":[19],"of":[20,23,32,40,45,53,137,164],"coronavirus.":[21],"One":[22,44],"the":[24,29,33,37,41,46,54,101,113,118,130,143,157,160,162,178,184,193,197],"most":[25,47],"important":[26,48],"reasons":[27],"for":[28,83],"rapid":[30],"spread":[31],"COVID-19":[34,42,55,84,114,131,194],"virus":[35,56,85],"are":[36],"frequent":[38],"mutations":[39,52,61,190],"virus.":[43],"methods":[49],"to":[50,58,156],"overcome":[51],"predict":[59,189],"these":[60],"before":[62],"they":[63],"occur.":[64],"In":[65],"this":[66],"study,":[67],"we":[68],"propose":[69],"a":[70,182],"robust":[71],"HyperMixer":[72],"long":[74],"short-term":[75],"memory":[76],"based":[77],"model":[78,91,104,121,146],"with":[79,134,147,154],"attention":[80],"mechanisms,":[81],"HyperAttCov,":[82],"mutation":[86],"prediction.":[87],"The":[88],"proposed":[89,102,119,144,185],"HyperAttCov":[90,103,120,145,186],"outperforms":[92],"several":[93],"state-of-the-art":[94],"methods.":[95],"Experimental":[96],"results":[97],"have":[98],"showed":[99],"that":[100],"reached":[105,122],"accuracy":[106,123,171],"70.0%,":[107],"precision":[108,125,173],"92.0%,":[109],"MCC":[110,127,175],"46.5%":[111],"on":[112,129,177,192],"testing":[115,132,179],"dataset.":[116,180],"Similarly,":[117],"70.2%,":[124],"90.4%,":[126],"46.2%":[128],"dataset":[133,195],"average":[136,163],"10":[138,148],"random":[139,149],"trail.":[140],"Besides,":[141],"When":[142],"trail":[150],"has":[151,167],"been":[152,168],"compared":[153,155],"study":[158],"in":[159,196],"literature,":[161],"performance":[165],"values":[166],"increased":[169],"7.18%,":[172],"37.39%,":[174],"49.51%":[176],"As":[181],"result,":[183],"can":[187],"successfully":[188],"occurring":[191],"2022":[198],"year.":[199]},"counts_by_year":[{"year":2026,"cited_by_count":1},{"year":2025,"cited_by_count":1},{"year":2024,"cited_by_count":2}],"updated_date":"2026-06-17T06:14:20.161405","created_date":"2025-10-10T00:00:00"}
