{"id":"https://openalex.org/W3200266278","doi":"https://doi.org/10.1093/comjnl/bxab127","title":"White Matter, Gray Matter and Cerebrospinal Fluid Segmentation from Brain Magnetic Resonance Imaging Using Adaptive U-Net and Local Convolutional Neural Network","display_name":"White Matter, Gray Matter and Cerebrospinal Fluid Segmentation from Brain Magnetic Resonance Imaging Using Adaptive U-Net and Local Convolutional Neural Network","publication_year":2021,"publication_date":"2021-08-12","ids":{"openalex":"https://openalex.org/W3200266278","doi":"https://doi.org/10.1093/comjnl/bxab127","mag":"3200266278"},"language":"en","primary_location":{"id":"doi:10.1093/comjnl/bxab127","is_oa":false,"landing_page_url":"https://doi.org/10.1093/comjnl/bxab127","pdf_url":null,"source":{"id":"https://openalex.org/S44643521","display_name":"The Computer Journal","issn_l":"0010-4620","issn":["0010-4620","1460-2067"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"The Computer Journal","raw_type":"journal-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":true,"oa_status":"green","oa_url":"https://hdl.handle.net/10216/149253","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5033893320","display_name":"Pham The Bao","orcid":"https://orcid.org/0000-0002-4847-4366"},"institutions":[{"id":"https://openalex.org/I47807185","display_name":"Saigon University","ror":"https://ror.org/01f1fsr30","country_code":"VN","type":"education","lineage":["https://openalex.org/I47807185"]}],"countries":["VN"],"is_corresponding":true,"raw_author_name":"Pham The Bao","raw_affiliation_strings":["Department of Computer Science , Sai Gon University, Vietnam 273 An Duong Vuong street, Ward 3, District 5, Ho Chi Minh City 700000, Vietnam"],"affiliations":[{"raw_affiliation_string":"Department of Computer Science , Sai Gon University, Vietnam 273 An Duong Vuong street, Ward 3, District 5, Ho Chi Minh City 700000, Vietnam","institution_ids":["https://openalex.org/I47807185"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5008770267","display_name":"Tran Anh Tuan","orcid":"https://orcid.org/0000-0001-9994-8077"},"institutions":[{"id":"https://openalex.org/I123565023","display_name":"Vietnam National University Ho Chi Minh City","ror":"https://ror.org/00waaqh38","country_code":"VN","type":"education","lineage":["https://openalex.org/I123565023"]}],"countries":["VN"],"is_corresponding":false,"raw_author_name":"Tran Anh Tuan","raw_affiliation_strings":["Faculty of Mathematics and Computer Science , University of Science, Vietnam National University, Ho Chi Minh City, Vietnam 227 Nguyen Van Cu street, Ward 3, District 5, Ho Chi Minh City 700000, Vietnam"],"affiliations":[{"raw_affiliation_string":"Faculty of Mathematics and Computer Science , University of Science, Vietnam National University, Ho Chi Minh City, Vietnam 227 Nguyen Van Cu street, Ward 3, District 5, Ho Chi Minh City 700000, Vietnam","institution_ids":["https://openalex.org/I123565023"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5008770267","display_name":"Tran Anh Tuan","orcid":"https://orcid.org/0000-0001-9994-8077"},"institutions":[{"id":"https://openalex.org/I123565023","display_name":"Vietnam National University Ho Chi Minh City","ror":"https://ror.org/00waaqh38","country_code":"VN","type":"education","lineage":["https://openalex.org/I123565023"]}],"countries":["VN"],"is_corresponding":false,"raw_author_name":"Tran Anh Tuan","raw_affiliation_strings":["Faculty of Mathematics and Computer Science , University of Science, Vietnam National University, Ho Chi Minh City, Vietnam 227 Nguyen Van Cu street, Ward 3, District 5, Ho Chi Minh City 700000, Vietnam"],"affiliations":[{"raw_affiliation_string":"Faculty of Mathematics and Computer Science , University of Science, Vietnam National University, Ho Chi Minh City, Vietnam 227 Nguyen Van Cu street, Ward 3, District 5, Ho Chi Minh City 700000, Vietnam","institution_ids":["https://openalex.org/I123565023"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5033390018","display_name":"Le Nhi Lam Thuy","orcid":"https://orcid.org/0000-0001-9527-9275"},"institutions":[{"id":"https://openalex.org/I47807185","display_name":"Saigon University","ror":"https://ror.org/01f1fsr30","country_code":"VN","type":"education","lineage":["https://openalex.org/I47807185"]}],"countries":["VN"],"is_corresponding":false,"raw_author_name":"Le Nhi Lam Thuy","raw_affiliation_strings":["Department of Computer Science , Sai Gon University, Vietnam 273 An Duong Vuong street, Ward 3, District 5, Ho Chi Minh City 700000, Vietnam"],"affiliations":[{"raw_affiliation_string":"Department of Computer Science , Sai Gon University, Vietnam 273 An Duong Vuong street, Ward 3, District 5, Ho Chi Minh City 700000, Vietnam","institution_ids":["https://openalex.org/I47807185"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100417174","display_name":"Jin Young Kim","orcid":"https://orcid.org/0000-0002-4896-8980"},"institutions":[{"id":"https://openalex.org/I111277659","display_name":"Chonnam National University","ror":"https://ror.org/05kzjxq56","country_code":"KR","type":"education","lineage":["https://openalex.org/I111277659"]}],"countries":["KR"],"is_corresponding":false,"raw_author_name":"Jin Young Kim","raw_affiliation_strings":["Department of Electronic and Computer Engineering , Chonnam National University, South Korea. 77 Yongbong-ro, Yongbong-dong, Buk-gu, Gwangju 61186, South Korea"],"affiliations":[{"raw_affiliation_string":"Department of Electronic and Computer Engineering , Chonnam National University, South Korea. 77 Yongbong-ro, Yongbong-dong, Buk-gu, Gwangju 61186, South Korea","institution_ids":["https://openalex.org/I111277659"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5056546246","display_name":"Jo\u00e3o Manuel R. S. Tavares","orcid":"https://orcid.org/0000-0001-7603-6526"},"institutions":[{"id":"https://openalex.org/I182534213","display_name":"Universidade do Porto","ror":"https://ror.org/043pwc612","country_code":"PT","type":"education","lineage":["https://openalex.org/I182534213"]},{"id":"https://openalex.org/I4403386606","display_name":"Instituto de Ci\u00eancia e Inova\u00e7\u00e3o em Engenharia Mec\u00e2nica e Engenharia Industrial","ror":"https://ror.org/01jbxwn06","country_code":null,"type":"facility","lineage":["https://openalex.org/I4403386606","https://openalex.org/I88596544"]},{"id":"https://openalex.org/I4210121509","display_name":"Institute of Mechanical Engineering and Industrial Mangement","ror":"https://ror.org/02pk7c879","country_code":"PT","type":"facility","lineage":["https://openalex.org/I182534213","https://openalex.org/I4210121509"]}],"countries":["PT"],"is_corresponding":false,"raw_author_name":"Jo\u00e3o Manuel R S Tavares","raw_affiliation_strings":["Instituto de Ci\u00eancia e Inova\u00e7\u00e3o em Engenharia Mec\u00e2nica e Engenharia Industrial , Departamento de Engenharia Mec\u00e2nica Faculdade de Engenharia, , Portugal Rua Dr. Roberto Frias, Porto 4200-465, Portugal","Universidade do Porto , Departamento de Engenharia Mec\u00e2nica Faculdade de Engenharia, , Portugal Rua Dr. Roberto Frias, Porto 4200-465, Portugal"],"affiliations":[{"raw_affiliation_string":"Instituto de Ci\u00eancia e Inova\u00e7\u00e3o em Engenharia Mec\u00e2nica e Engenharia Industrial , Departamento de Engenharia Mec\u00e2nica Faculdade de Engenharia, , Portugal Rua Dr. Roberto Frias, Porto 4200-465, Portugal","institution_ids":["https://openalex.org/I4210121509","https://openalex.org/I4403386606"]},{"raw_affiliation_string":"Universidade do Porto , Departamento de Engenharia Mec\u00e2nica Faculdade de Engenharia, , Portugal Rua Dr. Roberto Frias, Porto 4200-465, Portugal","institution_ids":["https://openalex.org/I182534213"]}]}],"institutions":[],"countries_distinct_count":3,"institutions_distinct_count":6,"corresponding_author_ids":["https://openalex.org/A5033893320"],"corresponding_institution_ids":["https://openalex.org/I47807185"],"apc_list":{"value":2635,"currency":"GBP","value_usd":3232},"apc_paid":null,"fwci":0.3843,"has_fulltext":false,"cited_by_count":5,"citation_normalized_percentile":{"value":0.6101634,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":96},"biblio":{"volume":"65","issue":"12","first_page":"3081","last_page":"3090"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10052","display_name":"Medical Image Segmentation Techniques","score":0.9998000264167786,"subfield":{"id":"https://openalex.org/subfields/1707","display_name":"Computer Vision and Pattern Recognition"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T10052","display_name":"Medical Image Segmentation Techniques","score":0.9998000264167786,"subfield":{"id":"https://openalex.org/subfields/1707","display_name":"Computer Vision and Pattern Recognition"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T12702","display_name":"Brain Tumor Detection and Classification","score":0.9994000196456909,"subfield":{"id":"https://openalex.org/subfields/2808","display_name":"Neurology"},"field":{"id":"https://openalex.org/fields/28","display_name":"Neuroscience"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10036","display_name":"Advanced Neural Network Applications","score":0.9969000220298767,"subfield":{"id":"https://openalex.org/subfields/1707","display_name":"Computer Vision and Pattern Recognition"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/convolutional-neural-network","display_name":"Convolutional neural network","score":0.7647087574005127},{"id":"https://openalex.org/keywords/segmentation","display_name":"Segmentation","score":0.7378999590873718},{"id":"https://openalex.org/keywords/white-matter","display_name":"White matter","score":0.7270923852920532},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.7187719345092773},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6961943507194519},{"id":"https://openalex.org/keywords/magnetic-resonance-imaging","display_name":"Magnetic resonance imaging","score":0.685430645942688},{"id":"https://openalex.org/keywords/deep-learning","display_name":"Deep learning","score":0.5629460215568542},{"id":"https://openalex.org/keywords/image-segmentation","display_name":"Image segmentation","score":0.524445116519928},{"id":"https://openalex.org/keywords/pattern-recognition","display_name":"Pattern recognition (psychology)","score":0.48689547181129456},{"id":"https://openalex.org/keywords/pixel","display_name":"Pixel","score":0.468932181596756},{"id":"https://openalex.org/keywords/s\u00f8rensen\u2013dice-coefficient","display_name":"S\u00f8rensen\u2013Dice coefficient","score":0.4468039572238922},{"id":"https://openalex.org/keywords/neuroimaging","display_name":"Neuroimaging","score":0.4462486803531647},{"id":"https://openalex.org/keywords/grey-matter","display_name":"Grey matter","score":0.4460865557193756},{"id":"https://openalex.org/keywords/artificial-neural-network","display_name":"Artificial neural network","score":0.41274788975715637},{"id":"https://openalex.org/keywords/medicine","display_name":"Medicine","score":0.2526816129684448},{"id":"https://openalex.org/keywords/radiology","display_name":"Radiology","score":0.17755892872810364},{"id":"https://openalex.org/keywords/neuroscience","display_name":"Neuroscience","score":0.16732636094093323},{"id":"https://openalex.org/keywords/psychology","display_name":"Psychology","score":0.10695236921310425}],"concepts":[{"id":"https://openalex.org/C81363708","wikidata":"https://www.wikidata.org/wiki/Q17084460","display_name":"Convolutional neural network","level":2,"score":0.7647087574005127},{"id":"https://openalex.org/C89600930","wikidata":"https://www.wikidata.org/wiki/Q1423946","display_name":"Segmentation","level":2,"score":0.7378999590873718},{"id":"https://openalex.org/C2781192897","wikidata":"https://www.wikidata.org/wiki/Q822050","display_name":"White matter","level":3,"score":0.7270923852920532},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.7187719345092773},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6961943507194519},{"id":"https://openalex.org/C143409427","wikidata":"https://www.wikidata.org/wiki/Q161238","display_name":"Magnetic resonance imaging","level":2,"score":0.685430645942688},{"id":"https://openalex.org/C108583219","wikidata":"https://www.wikidata.org/wiki/Q197536","display_name":"Deep learning","level":2,"score":0.5629460215568542},{"id":"https://openalex.org/C124504099","wikidata":"https://www.wikidata.org/wiki/Q56933","display_name":"Image segmentation","level":3,"score":0.524445116519928},{"id":"https://openalex.org/C153180895","wikidata":"https://www.wikidata.org/wiki/Q7148389","display_name":"Pattern recognition (psychology)","level":2,"score":0.48689547181129456},{"id":"https://openalex.org/C160633673","wikidata":"https://www.wikidata.org/wiki/Q355198","display_name":"Pixel","level":2,"score":0.468932181596756},{"id":"https://openalex.org/C163892561","wikidata":"https://www.wikidata.org/wiki/Q2613728","display_name":"S\u00f8rensen\u2013Dice coefficient","level":4,"score":0.4468039572238922},{"id":"https://openalex.org/C58693492","wikidata":"https://www.wikidata.org/wiki/Q551875","display_name":"Neuroimaging","level":2,"score":0.4462486803531647},{"id":"https://openalex.org/C2778013878","wikidata":"https://www.wikidata.org/wiki/Q646150","display_name":"Grey matter","level":4,"score":0.4460865557193756},{"id":"https://openalex.org/C50644808","wikidata":"https://www.wikidata.org/wiki/Q192776","display_name":"Artificial neural network","level":2,"score":0.41274788975715637},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.2526816129684448},{"id":"https://openalex.org/C126838900","wikidata":"https://www.wikidata.org/wiki/Q77604","display_name":"Radiology","level":1,"score":0.17755892872810364},{"id":"https://openalex.org/C169760540","wikidata":"https://www.wikidata.org/wiki/Q207011","display_name":"Neuroscience","level":1,"score":0.16732636094093323},{"id":"https://openalex.org/C15744967","wikidata":"https://www.wikidata.org/wiki/Q9418","display_name":"Psychology","level":0,"score":0.10695236921310425}],"mesh":[],"locations_count":2,"locations":[{"id":"doi:10.1093/comjnl/bxab127","is_oa":false,"landing_page_url":"https://doi.org/10.1093/comjnl/bxab127","pdf_url":null,"source":{"id":"https://openalex.org/S44643521","display_name":"The Computer Journal","issn_l":"0010-4620","issn":["0010-4620","1460-2067"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"The Computer Journal","raw_type":"journal-article"},{"id":"pmh:oai:repositorio-aberto.up.pt:10216/149253","is_oa":true,"landing_page_url":"https://hdl.handle.net/10216/149253","pdf_url":null,"source":{"id":"https://openalex.org/S4306401934","display_name":"Open Repository of the University of Porto (University of Porto)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I182534213","host_organization_name":"Universidade do Porto","host_organization_lineage":["https://openalex.org/I182534213"],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":null}],"best_oa_location":{"id":"pmh:oai:repositorio-aberto.up.pt:10216/149253","is_oa":true,"landing_page_url":"https://hdl.handle.net/10216/149253","pdf_url":null,"source":{"id":"https://openalex.org/S4306401934","display_name":"Open Repository of the University of Porto (University of Porto)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I182534213","host_organization_name":"Universidade do Porto","host_organization_lineage":["https://openalex.org/I182534213"],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":null},"sustainable_development_goals":[{"display_name":"Partnerships for the goals","id":"https://metadata.un.org/sdg/17","score":0.44999998807907104}],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":34,"referenced_works":["https://openalex.org/W168054363","https://openalex.org/W328696533","https://openalex.org/W1522301498","https://openalex.org/W1528119265","https://openalex.org/W1536144061","https://openalex.org/W1723619723","https://openalex.org/W1987869189","https://openalex.org/W2004293194","https://openalex.org/W2006096283","https://openalex.org/W2065429801","https://openalex.org/W2093152647","https://openalex.org/W2105315952","https://openalex.org/W2112796928","https://openalex.org/W2135070546","https://openalex.org/W2143615397","https://openalex.org/W2165566667","https://openalex.org/W2395611524","https://openalex.org/W2487770199","https://openalex.org/W2499071958","https://openalex.org/W2499316477","https://openalex.org/W2592929672","https://openalex.org/W2593626777","https://openalex.org/W2621028221","https://openalex.org/W2622826443","https://openalex.org/W2625430291","https://openalex.org/W2762683804","https://openalex.org/W2768907601","https://openalex.org/W2770233088","https://openalex.org/W2904769422","https://openalex.org/W2963881378","https://openalex.org/W2964121744","https://openalex.org/W3103473250","https://openalex.org/W4231652925","https://openalex.org/W6746078209"],"related_works":["https://openalex.org/W2028814883","https://openalex.org/W4205866527","https://openalex.org/W2997548647","https://openalex.org/W2071001789","https://openalex.org/W2460293179","https://openalex.org/W1595276058","https://openalex.org/W2049932968","https://openalex.org/W1977549674","https://openalex.org/W2017977110","https://openalex.org/W4253937632"],"abstract_inverted_index":{"Abstract":[0],"According":[1],"to":[2,35,74,91,108,121,141],"the":[3,16,29,44,93,99,113,123,129,147,178],"World":[4],"Alzheimer":[5],"Report":[6],"2015,":[7],"46":[8],"million":[9],"people":[10],"are":[11],"living":[12],"with":[13,136,154,164,172],"dementia":[14],"in":[15,50,63,79,146],"world.":[17],"The":[18],"diagnosis":[19],"of":[20,28,31,47,174],"diseases":[21,32],"helps":[22],"doctors":[23],"treating":[24],"patients":[25],"better.":[26],"One":[27],"signs":[30],"is":[33,89,106,119,139],"related":[34],"white":[36],"matter,":[37],"grey":[38],"matter":[39],"and":[40,95,125,128,170],"cerebrospinal":[41],"fluid.":[42],"Therefore,":[43],"automatic":[45],"segmentation":[46],"three":[48],"tissues":[49,78],"brain":[51,82],"imaging":[52,57],"especially":[53],"from":[54],"magnetic":[55],"resonance":[56],"(MRI)":[58],"plays":[59],"an":[60,71,115],"important":[61],"role":[62],"medical":[64],"analysis.":[65],"In":[66,98,112],"this":[67],"research,":[68],"we":[69],"proposed":[70],"effective":[72],"approach":[73],"segment":[75,92,122],"automatically":[76],"these":[77],"three-dimensional":[80],"(3D)":[81],"MRI.":[83],"First,":[84],"a":[85,155],"deep":[86,103],"learning":[87,104],"model":[88,105,118,135],"used":[90,107,120,140],"sure":[94,124],"unsure":[96,100,126,148],"regions.":[97],"region,":[101],"another":[102],"classify":[109,142],"each":[110,143],"pixel.":[111],"experiments,":[114],"adaptive":[116],"U-net":[117],"regions,":[127],"Local":[130],"Convolutional":[131],"Neural":[132],"Network":[133],"(CNN)":[134],"multiple":[137],"inputs":[138],"pixel":[144],"only":[145],"region.":[149],"Our":[150],"method":[151],"was":[152],"evaluated":[153],"real":[156],"image":[157],"database,":[158,163],"Internet":[159],"Brain":[160],"Segmentation":[161],"Repository":[162],"18":[165],"persons":[166],"(IBSR":[167],"18)":[168],"(https://www.nitrc.org/projects/ibsr)":[169],"compared":[171],"state":[173],"art":[175],"methods":[176],"being":[177],"results":[179],"very":[180],"promising.":[181]},"counts_by_year":[{"year":2025,"cited_by_count":1},{"year":2024,"cited_by_count":2},{"year":2023,"cited_by_count":1},{"year":2022,"cited_by_count":1}],"updated_date":"2025-11-06T03:46:38.306776","created_date":"2025-10-10T00:00:00"}
