{"id":"https://openalex.org/W2966953831","doi":"https://doi.org/10.1093/bioinformatics/btz628","title":"Protein Homeostasis Database: protein quality control in <i>E.coli</i>","display_name":"Protein Homeostasis Database: protein quality control in <i>E.coli</i>","publication_year":2019,"publication_date":"2019-08-06","ids":{"openalex":"https://openalex.org/W2966953831","doi":"https://doi.org/10.1093/bioinformatics/btz628","mag":"2966953831","pmid":"https://pubmed.ncbi.nlm.nih.gov/31392322"},"language":"en","primary_location":{"id":"doi:10.1093/bioinformatics/btz628","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btz628","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/36/3/948/48982132/bioinformatics_36_3_948.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"hybrid","oa_url":"https://academic.oup.com/bioinformatics/article-pdf/36/3/948/48982132/bioinformatics_36_3_948.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5047302297","display_name":"Reshmi Ramakrishnan","orcid":"https://orcid.org/0000-0001-9566-013X"},"institutions":[{"id":"https://openalex.org/I99464096","display_name":"KU Leuven","ror":"https://ror.org/05f950310","country_code":"BE","type":"education","lineage":["https://openalex.org/I99464096"]},{"id":"https://openalex.org/I4210153928","display_name":"VIB-KU Leuven Center for Brain & Disease Research","ror":"https://ror.org/045c7t348","country_code":"BE","type":"facility","lineage":["https://openalex.org/I2802017950","https://openalex.org/I4210153928","https://openalex.org/I99464096"]}],"countries":["BE"],"is_corresponding":false,"raw_author_name":"Reshmi Ramakrishnan","raw_affiliation_strings":["Department of Cellular and Molecular Medicine, KU Leuven , Leuven 3000, Belgium","Switch Laboratory, VIB-KU Leuven Center for Brain & Disease Research , VIB, Leuven 3000, Belgium"],"affiliations":[{"raw_affiliation_string":"Department of Cellular and Molecular Medicine, KU Leuven , Leuven 3000, Belgium","institution_ids":["https://openalex.org/I99464096"]},{"raw_affiliation_string":"Switch Laboratory, VIB-KU Leuven Center for Brain & Disease Research , VIB, Leuven 3000, Belgium","institution_ids":["https://openalex.org/I4210153928"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5073007733","display_name":"Bert Houben","orcid":"https://orcid.org/0000-0002-6750-011X"},"institutions":[{"id":"https://openalex.org/I99464096","display_name":"KU Leuven","ror":"https://ror.org/05f950310","country_code":"BE","type":"education","lineage":["https://openalex.org/I99464096"]},{"id":"https://openalex.org/I4210153928","display_name":"VIB-KU Leuven Center for Brain & Disease Research","ror":"https://ror.org/045c7t348","country_code":"BE","type":"facility","lineage":["https://openalex.org/I2802017950","https://openalex.org/I4210153928","https://openalex.org/I99464096"]}],"countries":["BE"],"is_corresponding":false,"raw_author_name":"Bert Houben","raw_affiliation_strings":["Department of Cellular and Molecular Medicine, KU Leuven , Leuven 3000, Belgium","Switch Laboratory, VIB-KU Leuven Center for Brain & Disease Research , VIB, Leuven 3000, Belgium"],"affiliations":[{"raw_affiliation_string":"Department of Cellular and Molecular Medicine, KU Leuven , Leuven 3000, Belgium","institution_ids":["https://openalex.org/I99464096"]},{"raw_affiliation_string":"Switch Laboratory, VIB-KU Leuven Center for Brain & Disease Research , VIB, Leuven 3000, Belgium","institution_ids":["https://openalex.org/I4210153928"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5043638333","display_name":"\u0141ukasz Kreft","orcid":"https://orcid.org/0000-0001-7620-4657"},"institutions":[{"id":"https://openalex.org/I4210140355","display_name":"VIB-VUB Center for Structural Biology","ror":"https://ror.org/03e84cm85","country_code":"BE","type":"facility","lineage":["https://openalex.org/I13469542","https://openalex.org/I2802017950","https://openalex.org/I4210140355"]}],"countries":["BE"],"is_corresponding":false,"raw_author_name":"\u0141ukasz Kreft","raw_affiliation_strings":["VIB Bioinformatics Core , VIB, Gent 9052, Belgium"],"affiliations":[{"raw_affiliation_string":"VIB Bioinformatics Core , VIB, Gent 9052, Belgium","institution_ids":["https://openalex.org/I4210140355"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5101955577","display_name":"Alexander Botzki","orcid":"https://orcid.org/0000-0001-6691-4233"},"institutions":[{"id":"https://openalex.org/I4210140355","display_name":"VIB-VUB Center for Structural Biology","ror":"https://ror.org/03e84cm85","country_code":"BE","type":"facility","lineage":["https://openalex.org/I13469542","https://openalex.org/I2802017950","https://openalex.org/I4210140355"]}],"countries":["BE"],"is_corresponding":false,"raw_author_name":"Alexander Botzki","raw_affiliation_strings":["VIB Bioinformatics Core , VIB, Gent 9052, Belgium"],"affiliations":[{"raw_affiliation_string":"VIB Bioinformatics Core , VIB, Gent 9052, Belgium","institution_ids":["https://openalex.org/I4210140355"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5031589452","display_name":"Joost Schymkowitz","orcid":"https://orcid.org/0000-0003-2020-0168"},"institutions":[{"id":"https://openalex.org/I4210153928","display_name":"VIB-KU Leuven Center for Brain & Disease Research","ror":"https://ror.org/045c7t348","country_code":"BE","type":"facility","lineage":["https://openalex.org/I2802017950","https://openalex.org/I4210153928","https://openalex.org/I99464096"]},{"id":"https://openalex.org/I99464096","display_name":"KU Leuven","ror":"https://ror.org/05f950310","country_code":"BE","type":"education","lineage":["https://openalex.org/I99464096"]}],"countries":["BE"],"is_corresponding":true,"raw_author_name":"Joost Schymkowitz","raw_affiliation_strings":["Department of Cellular and Molecular Medicine, KU Leuven , Leuven 3000, Belgium","Switch Laboratory, VIB-KU Leuven Center for Brain & Disease Research , VIB, Leuven 3000, Belgium"],"affiliations":[{"raw_affiliation_string":"Department of Cellular and Molecular Medicine, KU Leuven , Leuven 3000, Belgium","institution_ids":["https://openalex.org/I99464096"]},{"raw_affiliation_string":"Switch Laboratory, VIB-KU Leuven Center for Brain & Disease Research , VIB, Leuven 3000, Belgium","institution_ids":["https://openalex.org/I4210153928"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5008256216","display_name":"Fr\u00e9d\u00e9ric Rousseau","orcid":"https://orcid.org/0000-0002-9189-7399"},"institutions":[{"id":"https://openalex.org/I99464096","display_name":"KU Leuven","ror":"https://ror.org/05f950310","country_code":"BE","type":"education","lineage":["https://openalex.org/I99464096"]},{"id":"https://openalex.org/I4210153928","display_name":"VIB-KU Leuven Center for Brain & Disease Research","ror":"https://ror.org/045c7t348","country_code":"BE","type":"facility","lineage":["https://openalex.org/I2802017950","https://openalex.org/I4210153928","https://openalex.org/I99464096"]}],"countries":["BE"],"is_corresponding":true,"raw_author_name":"Frederic Rousseau","raw_affiliation_strings":["Department of Cellular and Molecular Medicine, KU Leuven , Leuven 3000, Belgium","Switch Laboratory, VIB-KU Leuven Center for Brain & Disease Research , VIB, Leuven 3000, Belgium"],"affiliations":[{"raw_affiliation_string":"Department of Cellular and Molecular Medicine, KU Leuven , Leuven 3000, Belgium","institution_ids":["https://openalex.org/I99464096"]},{"raw_affiliation_string":"Switch Laboratory, VIB-KU Leuven Center for Brain & Disease Research , VIB, Leuven 3000, Belgium","institution_ids":["https://openalex.org/I4210153928"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":6,"corresponding_author_ids":["https://openalex.org/A5008256216","https://openalex.org/A5031589452"],"corresponding_institution_ids":["https://openalex.org/I4210153928","https://openalex.org/I99464096"],"apc_list":{"value":3618,"currency":"USD","value_usd":3618},"apc_paid":{"value":3618,"currency":"USD","value_usd":3618},"fwci":0.2557,"has_fulltext":true,"cited_by_count":4,"citation_normalized_percentile":{"value":0.55797147,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":96},"biblio":{"volume":"36","issue":"3","first_page":"948","last_page":"949"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10934","display_name":"Heat shock proteins research","score":0.9991999864578247,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10934","display_name":"Heat shock proteins research","score":0.9991999864578247,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10044","display_name":"Protein Structure and Dynamics","score":0.9988999962806702,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11162","display_name":"Enzyme Structure and Function","score":0.9972000122070312,"subfield":{"id":"https://openalex.org/subfields/2505","display_name":"Materials Chemistry"},"field":{"id":"https://openalex.org/fields/25","display_name":"Materials Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/control","display_name":"Control (management)","score":0.45532870292663574},{"id":"https://openalex.org/keywords/quality","display_name":"Quality (philosophy)","score":0.454183965921402},{"id":"https://openalex.org/keywords/homeostasis","display_name":"Homeostasis","score":0.4380265474319458},{"id":"https://openalex.org/keywords/database","display_name":"Database","score":0.4254961311817169},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.41678112745285034},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.2546854615211487},{"id":"https://openalex.org/keywords/cell-biology","display_name":"Cell biology","score":0.1107933521270752},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.07309126853942871}],"concepts":[{"id":"https://openalex.org/C2775924081","wikidata":"https://www.wikidata.org/wiki/Q55608371","display_name":"Control (management)","level":2,"score":0.45532870292663574},{"id":"https://openalex.org/C2779530757","wikidata":"https://www.wikidata.org/wiki/Q1207505","display_name":"Quality (philosophy)","level":2,"score":0.454183965921402},{"id":"https://openalex.org/C63645605","wikidata":"https://www.wikidata.org/wiki/Q103191","display_name":"Homeostasis","level":2,"score":0.4380265474319458},{"id":"https://openalex.org/C77088390","wikidata":"https://www.wikidata.org/wiki/Q8513","display_name":"Database","level":1,"score":0.4254961311817169},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.41678112745285034},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.2546854615211487},{"id":"https://openalex.org/C95444343","wikidata":"https://www.wikidata.org/wiki/Q7141","display_name":"Cell biology","level":1,"score":0.1107933521270752},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.07309126853942871},{"id":"https://openalex.org/C138885662","wikidata":"https://www.wikidata.org/wiki/Q5891","display_name":"Philosophy","level":0,"score":0.0},{"id":"https://openalex.org/C111472728","wikidata":"https://www.wikidata.org/wiki/Q9471","display_name":"Epistemology","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D000074702","descriptor_name":"Proteostasis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000074702","descriptor_name":"Proteostasis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000074702","descriptor_name":"Proteostasis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D004926","descriptor_name":"Escherichia coli","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D004926","descriptor_name":"Escherichia coli","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D004926","descriptor_name":"Escherichia coli","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D017510","descriptor_name":"Protein Folding","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D017510","descriptor_name":"Protein Folding","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D017510","descriptor_name":"Protein Folding","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D018832","descriptor_name":"Molecular Chaperones","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D018832","descriptor_name":"Molecular Chaperones","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D018832","descriptor_name":"Molecular Chaperones","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D018840","descriptor_name":"HSP70 Heat-Shock Proteins","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D018840","descriptor_name":"HSP70 Heat-Shock Proteins","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D018840","descriptor_name":"HSP70 Heat-Shock Proteins","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D029968","descriptor_name":"Escherichia coli Proteins","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D029968","descriptor_name":"Escherichia coli Proteins","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D029968","descriptor_name":"Escherichia coli Proteins","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true}],"locations_count":4,"locations":[{"id":"doi:10.1093/bioinformatics/btz628","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btz628","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/36/3/948/48982132/bioinformatics_36_3_948.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},{"id":"pmid:31392322","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/31392322","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics (Oxford, England)","raw_type":null},{"id":"pmh:oai:lirias2repo.kuleuven.be:123456789/640581","is_oa":true,"landing_page_url":"https://lirias.kuleuven.be/handle/123456789/640581","pdf_url":null,"source":{"id":"https://openalex.org/S4306401954","display_name":"Lirias (KU Leuven)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I99464096","host_organization_name":"KU Leuven","host_organization_lineage":["https://openalex.org/I99464096"],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"acceptedVersion","is_accepted":true,"is_published":false,"raw_source_name":"Bioinformatics, vol. 36 (3), (948-949)","raw_type":"info:eu-repo/semantics/publishedVersion"},{"id":"pmh:oai:pubmedcentral.nih.gov:9883681","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/9883681","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Bioinformatics","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1093/bioinformatics/btz628","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btz628","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/36/3/948/48982132/bioinformatics_36_3_948.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[],"funders":[{"id":"https://openalex.org/F4320320300","display_name":"European Commission","ror":"https://ror.org/00k4n6c32"},{"id":"https://openalex.org/F4320321730","display_name":"Fonds Wetenschappelijk Onderzoek","ror":"https://ror.org/03qtxy027"},{"id":"https://openalex.org/F4320322837","display_name":"Vlaams Instituut voor Biotechnologie","ror":"https://ror.org/03xrhmk39"},{"id":"https://openalex.org/F4320327336","display_name":"Vlaamse regering","ror":null},{"id":"https://openalex.org/F4320332999","display_name":"Horizon 2020 Framework Programme","ror":"https://ror.org/00k4n6c32"}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2966953831.pdf","grobid_xml":"https://content.openalex.org/works/W2966953831.grobid-xml"},"referenced_works_count":14,"referenced_works":["https://openalex.org/W1533808701","https://openalex.org/W2029086579","https://openalex.org/W2041063421","https://openalex.org/W2048945529","https://openalex.org/W2098953186","https://openalex.org/W2105463652","https://openalex.org/W2137012036","https://openalex.org/W2147289825","https://openalex.org/W2170132114","https://openalex.org/W2171533950","https://openalex.org/W2172170548","https://openalex.org/W2295934132","https://openalex.org/W2409924413","https://openalex.org/W2939634900"],"related_works":["https://openalex.org/W2384667405","https://openalex.org/W2389266787","https://openalex.org/W2363885542","https://openalex.org/W2387206255","https://openalex.org/W2355570285","https://openalex.org/W2364958354","https://openalex.org/W2352797113","https://openalex.org/W2372137583","https://openalex.org/W1548050717","https://openalex.org/W2374872591"],"abstract_inverted_index":{"The":[0],"Protein":[1],"Homeostasis":[2],"Database":[3],"is":[4],"freely":[5],"available":[6],"without":[7],"any":[8],"registration":[9],"requirement":[10],"at":[11],"http://PHDB.switchlab.org/.":[12]},"counts_by_year":[{"year":2025,"cited_by_count":1},{"year":2021,"cited_by_count":1},{"year":2020,"cited_by_count":2}],"updated_date":"2025-11-06T03:46:38.306776","created_date":"2019-08-22T00:00:00"}
