{"id":"https://openalex.org/W2971308142","doi":"https://doi.org/10.1093/bioinformatics/btz605","title":"gwasrapidd: an R package to query, download and wrangle GWAS catalog data","display_name":"gwasrapidd: an R package to query, download and wrangle GWAS catalog data","publication_year":2019,"publication_date":"2019-08-01","ids":{"openalex":"https://openalex.org/W2971308142","doi":"https://doi.org/10.1093/bioinformatics/btz605","mag":"2971308142","pmid":"https://pubmed.ncbi.nlm.nih.gov/31373609"},"language":"en","primary_location":{"id":"doi:10.1093/bioinformatics/btz605","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btz605","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/36/2/649/31962781/btz605.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"hybrid","oa_url":"https://academic.oup.com/bioinformatics/article-pdf/36/2/649/31962781/btz605.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5079794370","display_name":"Ramiro Magno","orcid":"https://orcid.org/0000-0001-5226-3441"},"institutions":[{"id":"https://openalex.org/I4210121181","display_name":"Algarve Biomedical Center","ror":"https://ror.org/02rgrnk13","country_code":"PT","type":"facility","lineage":["https://openalex.org/I4210121181"]},{"id":"https://openalex.org/I4210161010","display_name":"Centre of Biomedical Research","ror":"https://ror.org/05xkqnm68","country_code":"IN","type":"facility","lineage":["https://openalex.org/I4210161010"]}],"countries":["IN","PT"],"is_corresponding":false,"raw_author_name":"Ramiro Magno","raw_affiliation_strings":["Algarve Biomedical Center (ABC)","Centre for Biomedical Research (CBMR)"],"raw_orcid":"https://orcid.org/0000-0001-5226-3441","affiliations":[{"raw_affiliation_string":"Algarve Biomedical Center (ABC)","institution_ids":["https://openalex.org/I4210121181"]},{"raw_affiliation_string":"Centre for Biomedical Research (CBMR)","institution_ids":["https://openalex.org/I4210161010"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5035891313","display_name":"Ana-Teresa Maia","orcid":"https://orcid.org/0000-0002-0454-9207"},"institutions":[{"id":"https://openalex.org/I4210121181","display_name":"Algarve Biomedical Center","ror":"https://ror.org/02rgrnk13","country_code":"PT","type":"facility","lineage":["https://openalex.org/I4210121181"]},{"id":"https://openalex.org/I4210161010","display_name":"Centre of Biomedical Research","ror":"https://ror.org/05xkqnm68","country_code":"IN","type":"facility","lineage":["https://openalex.org/I4210161010"]},{"id":"https://openalex.org/I71503853","display_name":"University of Algarve","ror":"https://ror.org/014g34x36","country_code":"PT","type":"education","lineage":["https://openalex.org/I71503853"]}],"countries":["IN","PT"],"is_corresponding":true,"raw_author_name":"Ana-Teresa Maia","raw_affiliation_strings":["Algarve Biomedical Center (ABC)","Centre for Biomedical Research (CBMR)","Department of Biomedical Sciences and Medicine (DCBM) , Universidade do Algarve, Faro 8005-139, Portugal"],"raw_orcid":"https://orcid.org/0000-0002-0454-9207","affiliations":[{"raw_affiliation_string":"Algarve Biomedical Center (ABC)","institution_ids":["https://openalex.org/I4210121181"]},{"raw_affiliation_string":"Centre for Biomedical Research (CBMR)","institution_ids":["https://openalex.org/I4210161010"]},{"raw_affiliation_string":"Department of Biomedical Sciences and Medicine (DCBM) , Universidade do Algarve, Faro 8005-139, Portugal","institution_ids":["https://openalex.org/I71503853"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":3,"corresponding_author_ids":["https://openalex.org/A5035891313"],"corresponding_institution_ids":["https://openalex.org/I4210121181","https://openalex.org/I4210161010","https://openalex.org/I71503853"],"apc_list":{"value":3618,"currency":"USD","value_usd":3618},"apc_paid":{"value":3618,"currency":"USD","value_usd":3618},"fwci":3.7063,"has_fulltext":true,"cited_by_count":69,"citation_normalized_percentile":{"value":0.93410062,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":94,"max":100},"biblio":{"volume":"36","issue":"2","first_page":"649","last_page":"650"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10261","display_name":"Genetic Associations and Epidemiology","score":0.9269999861717224,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10261","display_name":"Genetic Associations and Epidemiology","score":0.9269999861717224,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11642","display_name":"Genomics and Rare Diseases","score":0.011099999770522118,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.010099999606609344,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.801770806312561},{"id":"https://openalex.org/keywords/interface","display_name":"Interface (matter)","score":0.5863385200500488},{"id":"https://openalex.org/keywords/mit-license","display_name":"MIT License","score":0.5321919918060303},{"id":"https://openalex.org/keywords/software","display_name":"Software","score":0.5054981708526611},{"id":"https://openalex.org/keywords/genome-wide-association-study","display_name":"Genome-wide association study","score":0.5023596286773682},{"id":"https://openalex.org/keywords/download","display_name":"Download","score":0.49999070167541504},{"id":"https://openalex.org/keywords/information-retrieval","display_name":"Information retrieval","score":0.4222770929336548},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.3693661689758301},{"id":"https://openalex.org/keywords/database","display_name":"Database","score":0.358487069606781},{"id":"https://openalex.org/keywords/world-wide-web","display_name":"World Wide Web","score":0.3111059069633484},{"id":"https://openalex.org/keywords/programming-language","display_name":"Programming language","score":0.1433945894241333},{"id":"https://openalex.org/keywords/operating-system","display_name":"Operating system","score":0.14255693554878235},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.10263070464134216}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.801770806312561},{"id":"https://openalex.org/C113843644","wikidata":"https://www.wikidata.org/wiki/Q901882","display_name":"Interface (matter)","level":4,"score":0.5863385200500488},{"id":"https://openalex.org/C174183944","wikidata":"https://www.wikidata.org/wiki/Q334661","display_name":"MIT License","level":3,"score":0.5321919918060303},{"id":"https://openalex.org/C2777904410","wikidata":"https://www.wikidata.org/wiki/Q7397","display_name":"Software","level":2,"score":0.5054981708526611},{"id":"https://openalex.org/C106208931","wikidata":"https://www.wikidata.org/wiki/Q1098876","display_name":"Genome-wide association study","level":5,"score":0.5023596286773682},{"id":"https://openalex.org/C2780154274","wikidata":"https://www.wikidata.org/wiki/Q7126717","display_name":"Download","level":2,"score":0.49999070167541504},{"id":"https://openalex.org/C23123220","wikidata":"https://www.wikidata.org/wiki/Q816826","display_name":"Information retrieval","level":1,"score":0.4222770929336548},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.3693661689758301},{"id":"https://openalex.org/C77088390","wikidata":"https://www.wikidata.org/wiki/Q8513","display_name":"Database","level":1,"score":0.358487069606781},{"id":"https://openalex.org/C136764020","wikidata":"https://www.wikidata.org/wiki/Q466","display_name":"World Wide Web","level":1,"score":0.3111059069633484},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.1433945894241333},{"id":"https://openalex.org/C111919701","wikidata":"https://www.wikidata.org/wiki/Q9135","display_name":"Operating system","level":1,"score":0.14255693554878235},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.10263070464134216},{"id":"https://openalex.org/C153209595","wikidata":"https://www.wikidata.org/wiki/Q501128","display_name":"Single-nucleotide polymorphism","level":4,"score":0.0},{"id":"https://openalex.org/C135763542","wikidata":"https://www.wikidata.org/wiki/Q106016","display_name":"Genotype","level":3,"score":0.0},{"id":"https://openalex.org/C157915830","wikidata":"https://www.wikidata.org/wiki/Q2928001","display_name":"Bubble","level":2,"score":0.0},{"id":"https://openalex.org/C129307140","wikidata":"https://www.wikidata.org/wiki/Q6795880","display_name":"Maximum bubble pressure method","level":3,"score":0.0},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.0},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011642","descriptor_name":"Publications","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D011642","descriptor_name":"Publications","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D011642","descriptor_name":"Publications","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D055106","descriptor_name":"Genome-Wide Association Study","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D055106","descriptor_name":"Genome-Wide Association Study","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D055106","descriptor_name":"Genome-Wide Association Study","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true}],"locations_count":3,"locations":[{"id":"doi:10.1093/bioinformatics/btz605","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btz605","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/36/2/649/31962781/btz605.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},{"id":"pmid:31373609","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/31373609","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics (Oxford, England)","raw_type":null},{"id":"pmh:oai:pubmedcentral.nih.gov:9883700","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/9883700","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Bioinformatics","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1093/bioinformatics/btz605","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btz605","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/36/2/649/31962781/btz605.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[{"score":0.5199999809265137,"id":"https://metadata.un.org/sdg/17","display_name":"Partnerships for the goals"}],"awards":[{"id":"https://openalex.org/G1516346500","display_name":null,"funder_award_id":"01-0145","funder_id":"https://openalex.org/F4320334779","funder_display_name":"Funda\u00e7\u00e3o para a Ci\u00eancia e a Tecnologia"},{"id":"https://openalex.org/G1763632427","display_name":null,"funder_award_id":"POCI-01-0145","funder_id":"https://openalex.org/F4320334779","funder_display_name":"Funda\u00e7\u00e3o para a Ci\u00eancia e a Tecnologia"},{"id":"https://openalex.org/G3802939133","display_name":null,"funder_award_id":"ALGARVE 2020","funder_id":"https://openalex.org/F4320334779","funder_display_name":"Funda\u00e7\u00e3o para a Ci\u00eancia e a Tecnologia"},{"id":"https://openalex.org/G3840324753","display_name":null,"funder_award_id":"POCI-01-0145-FEDER-","funder_id":"https://openalex.org/F4320334779","funder_display_name":"Funda\u00e7\u00e3o para a Ci\u00eancia e a Tecnologia"},{"id":"https://openalex.org/G5224927334","display_name":null,"funder_award_id":"POCI-01-","funder_id":"https://openalex.org/F4320334779","funder_display_name":"Funda\u00e7\u00e3o para a Ci\u00eancia e a Tecnologia"},{"id":"https://openalex.org/G7363432985","display_name":null,"funder_award_id":"UID/BIM/04773/2013","funder_id":"https://openalex.org/F4320334779","funder_display_name":"Funda\u00e7\u00e3o para a Ci\u00eancia e a Tecnologia"},{"id":"https://openalex.org/G778408385","display_name":null,"funder_award_id":"POCI\\01\\0145\\FEDER\\022184","funder_id":"https://openalex.org/F4320334779","funder_display_name":"Funda\u00e7\u00e3o para a Ci\u00eancia e a Tecnologia"}],"funders":[{"id":"https://openalex.org/F4320330262","display_name":"Centro de Investiga\u00e7\u00e3o em Biomedicina","ror":null},{"id":"https://openalex.org/F4320334779","display_name":"Funda\u00e7\u00e3o para a Ci\u00eancia e a Tecnologia","ror":"https://ror.org/00snfqn58"}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2971308142.pdf","grobid_xml":"https://content.openalex.org/works/W2971308142.grobid-xml"},"referenced_works_count":4,"referenced_works":["https://openalex.org/W2116868464","https://openalex.org/W2582743722","https://openalex.org/W2770230381","https://openalex.org/W4235243453"],"related_works":["https://openalex.org/W2183842793","https://openalex.org/W2485259751","https://openalex.org/W4287615848","https://openalex.org/W4291722174","https://openalex.org/W2970575569","https://openalex.org/W4225768143","https://openalex.org/W2226303319","https://openalex.org/W4389542061","https://openalex.org/W2485273903","https://openalex.org/W4213341620"],"abstract_inverted_index":{"MOTIVATION:":[0],"The":[1,26],"National":[2],"Human":[3],"Genome":[4],"Research":[5],"Institute":[6],"Catalog":[7,14,30,66],"of":[8,103],"Published":[9],"Genome-Wide":[10],"Association":[11],"Studies":[12],"(GWAS)":[13],"has":[15],"collected,":[16],"curated":[17],"and":[18,85,117],"made":[19],"available":[20,112,128],"data":[21,87,126],"from":[22,121],"over":[23],"7100":[24],"studies.":[25],"recently":[27],"developed":[28],"GWAS":[29,65],"representational":[31],"state":[32],"transfer":[33],"(REST)":[34],"application":[35],"programming":[36],"interface":[37,62],"(API)":[38],"is":[39,94,110],"the":[40,59,64,75],"only":[41],"method":[42],"allowing":[43],"programmatic":[44],"access":[45],"to":[46,63,74,81],"this":[47],"resource.":[48],"RESULTS:":[49],"Here,":[50],"we":[51],"describe":[52],"gwasrapidd,":[53],"an":[54,70,114],"R":[55],"package":[56],"that":[57],"provides":[58],"first":[60],"client":[61],"REST":[67],"API,":[68],"representing":[69],"important":[71],"software":[72],"counterpart":[73],"server-side":[76],"component.":[77],"gwasrapidd":[78,109],"enables":[79],"users":[80],"quickly":[82],"retrieve,":[83],"filter":[84],"integrate":[86],"with":[88],"comprehensive":[89],"bioinformatics":[90],"analysis":[91],"tools,":[92],"which":[93],"particularly":[95],"critical":[96],"for":[97],"those":[98],"looking":[99],"into":[100],"functional":[101],"characterization":[102],"risk":[104],"loci.":[105],"AVAILABILITY":[106],"AND":[107],"IMPLEMENTATION:":[108],"freely":[111],"under":[113],"MIT":[115],"License,":[116],"can":[118],"be":[119],"accessed":[120],"https://github.com/ramiromagno/gwasrapidd.":[122],"SUPPLEMENTARY":[123],"INFORMATION:":[124],"Supplementary":[125],"are":[127],"at":[129],"Bioinformatics":[130],"online.":[131]},"counts_by_year":[{"year":2026,"cited_by_count":6},{"year":2025,"cited_by_count":15},{"year":2024,"cited_by_count":12},{"year":2023,"cited_by_count":13},{"year":2022,"cited_by_count":10},{"year":2021,"cited_by_count":8},{"year":2020,"cited_by_count":3},{"year":2019,"cited_by_count":2}],"updated_date":"2026-08-10T07:06:39.071514","created_date":"2025-10-10T00:00:00"}
