{"id":"https://openalex.org/W2968353232","doi":"https://doi.org/10.1093/bioinformatics/btz604","title":"ROBOKOP: an abstraction layer and user interface for knowledge graphs to support question answering","display_name":"ROBOKOP: an abstraction layer and user interface for knowledge graphs to support question answering","publication_year":2019,"publication_date":"2019-08-12","ids":{"openalex":"https://openalex.org/W2968353232","doi":"https://doi.org/10.1093/bioinformatics/btz604","mag":"2968353232","pmid":"https://pubmed.ncbi.nlm.nih.gov/31410449"},"language":"en","primary_location":{"id":"doi:10.1093/bioinformatics/btz604","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btz604","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/35/24/5382/48977655/bioinformatics_35_24_5382.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"hybrid","oa_url":"https://academic.oup.com/bioinformatics/article-pdf/35/24/5382/48977655/bioinformatics_35_24_5382.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5063514515","display_name":"Kenneth D. Morton","orcid":"https://orcid.org/0000-0002-9352-8669"},"institutions":[{"id":"https://openalex.org/I4210127482","display_name":"Applied Technologies (United States)","ror":"https://ror.org/03fwraz06","country_code":"US","type":"company","lineage":["https://openalex.org/I4210127482"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Kenneth Morton","raw_affiliation_strings":["CoVar Applied Technologies, Durham , NC, USA"],"raw_orcid":"https://orcid.org/0000-0002-9352-8669","affiliations":[{"raw_affiliation_string":"CoVar Applied Technologies, Durham , NC, USA","institution_ids":["https://openalex.org/I4210127482"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5001780813","display_name":"Patrick Wang","orcid":"https://orcid.org/0000-0002-6693-6106"},"institutions":[{"id":"https://openalex.org/I4210127482","display_name":"Applied Technologies (United States)","ror":"https://ror.org/03fwraz06","country_code":"US","type":"company","lineage":["https://openalex.org/I4210127482"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Patrick Wang","raw_affiliation_strings":["CoVar Applied Technologies, Durham , NC, USA"],"raw_orcid":"https://orcid.org/0000-0002-6693-6106","affiliations":[{"raw_affiliation_string":"CoVar Applied Technologies, Durham , NC, USA","institution_ids":["https://openalex.org/I4210127482"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5043972221","display_name":"Chris Bizon","orcid":null},"institutions":[{"id":"https://openalex.org/I69048370","display_name":"Renaissance Computing Institute","ror":"https://ror.org/01s91ey96","country_code":"US","type":"education","lineage":["https://openalex.org/I137902535","https://openalex.org/I170897317","https://openalex.org/I69048370"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Chris Bizon","raw_affiliation_strings":["Renaissance Computing Institute"],"raw_orcid":"https://orcid.org/0000-0002-9491-7674","affiliations":[{"raw_affiliation_string":"Renaissance Computing Institute","institution_ids":["https://openalex.org/I69048370"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5085106267","display_name":"Steven J. Cox","orcid":"https://orcid.org/0000-0002-8561-4508"},"institutions":[{"id":"https://openalex.org/I69048370","display_name":"Renaissance Computing Institute","ror":"https://ror.org/01s91ey96","country_code":"US","type":"education","lineage":["https://openalex.org/I137902535","https://openalex.org/I170897317","https://openalex.org/I69048370"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Steven Cox","raw_affiliation_strings":["Renaissance Computing Institute"],"raw_orcid":"https://orcid.org/0000-0002-8561-4508","affiliations":[{"raw_affiliation_string":"Renaissance Computing Institute","institution_ids":["https://openalex.org/I69048370"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5021056529","display_name":"James P. Balhoff","orcid":"https://orcid.org/0000-0002-8688-6599"},"institutions":[{"id":"https://openalex.org/I69048370","display_name":"Renaissance Computing Institute","ror":"https://ror.org/01s91ey96","country_code":"US","type":"education","lineage":["https://openalex.org/I137902535","https://openalex.org/I170897317","https://openalex.org/I69048370"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"James Balhoff","raw_affiliation_strings":["Renaissance Computing Institute"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Renaissance Computing Institute","institution_ids":["https://openalex.org/I69048370"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5056177526","display_name":"Yaphet Kebede","orcid":"https://orcid.org/0000-0002-5046-0246"},"institutions":[{"id":"https://openalex.org/I69048370","display_name":"Renaissance Computing Institute","ror":"https://ror.org/01s91ey96","country_code":"US","type":"education","lineage":["https://openalex.org/I137902535","https://openalex.org/I170897317","https://openalex.org/I69048370"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Yaphet Kebede","raw_affiliation_strings":["Renaissance Computing Institute"],"raw_orcid":"https://orcid.org/0000-0002-5046-0246","affiliations":[{"raw_affiliation_string":"Renaissance Computing Institute","institution_ids":["https://openalex.org/I69048370"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5048781098","display_name":"Karamarie Fecho","orcid":"https://orcid.org/0000-0002-6704-9306"},"institutions":[{"id":"https://openalex.org/I69048370","display_name":"Renaissance Computing Institute","ror":"https://ror.org/01s91ey96","country_code":"US","type":"education","lineage":["https://openalex.org/I137902535","https://openalex.org/I170897317","https://openalex.org/I69048370"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Karamarie Fecho","raw_affiliation_strings":["Renaissance Computing Institute"],"raw_orcid":"https://orcid.org/0000-0002-6704-9306","affiliations":[{"raw_affiliation_string":"Renaissance Computing Institute","institution_ids":["https://openalex.org/I69048370"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5078536199","display_name":"Alexander Tropsha","orcid":"https://orcid.org/0000-0003-3802-8896"},"institutions":[{"id":"https://openalex.org/I114027177","display_name":"University of North Carolina at Chapel Hill","ror":"https://ror.org/0130frc33","country_code":"US","type":"education","lineage":["https://openalex.org/I114027177"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Alexander Tropsha","raw_affiliation_strings":["School of Pharmacy, University of North Carolina at Chapel Hill , Chapel Hill, NC, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Pharmacy, University of North Carolina at Chapel Hill , Chapel Hill, NC, USA","institution_ids":["https://openalex.org/I114027177"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":8,"corresponding_author_ids":["https://openalex.org/A5048781098","https://openalex.org/A5063514515"],"corresponding_institution_ids":["https://openalex.org/I4210127482","https://openalex.org/I69048370"],"apc_list":{"value":3618,"currency":"USD","value_usd":3618},"apc_paid":{"value":3618,"currency":"USD","value_usd":3618},"fwci":5.6617,"has_fulltext":true,"cited_by_count":52,"citation_normalized_percentile":{"value":0.96726311,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":90,"max":100},"biblio":{"volume":"35","issue":"24","first_page":"5382","last_page":"5384"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11273","display_name":"Advanced Graph Neural Networks","score":0.8865000009536743,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T11273","display_name":"Advanced Graph Neural Networks","score":0.8865000009536743,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T12292","display_name":"Graph Theory and Algorithms","score":0.04839999973773956,"subfield":{"id":"https://openalex.org/subfields/1707","display_name":"Computer Vision and Pattern Recognition"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.01489999983459711,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.8505758047103882},{"id":"https://openalex.org/keywords/query-language","display_name":"Query language","score":0.6235235333442688},{"id":"https://openalex.org/keywords/web-search-query","display_name":"Web search query","score":0.5490255951881409},{"id":"https://openalex.org/keywords/web-query-classification","display_name":"Web query classification","score":0.5303282141685486},{"id":"https://openalex.org/keywords/exploit","display_name":"Exploit","score":0.5107024312019348},{"id":"https://openalex.org/keywords/graph","display_name":"Graph","score":0.48730456829071045},{"id":"https://openalex.org/keywords/abstraction","display_name":"Abstraction","score":0.4772084355354309},{"id":"https://openalex.org/keywords/information-retrieval","display_name":"Information retrieval","score":0.46676915884017944},{"id":"https://openalex.org/keywords/knowledge-graph","display_name":"Knowledge graph","score":0.46005839109420776},{"id":"https://openalex.org/keywords/online-aggregation","display_name":"Online aggregation","score":0.43839186429977417},{"id":"https://openalex.org/keywords/abstraction-layer","display_name":"Abstraction layer","score":0.4252033531665802},{"id":"https://openalex.org/keywords/graph-database","display_name":"Graph database","score":0.41805270314216614},{"id":"https://openalex.org/keywords/world-wide-web","display_name":"World Wide Web","score":0.369152307510376},{"id":"https://openalex.org/keywords/software","display_name":"Software","score":0.3411633372306824},{"id":"https://openalex.org/keywords/theoretical-computer-science","display_name":"Theoretical computer science","score":0.32051384449005127},{"id":"https://openalex.org/keywords/programming-language","display_name":"Programming language","score":0.2939625680446625},{"id":"https://openalex.org/keywords/search-engine","display_name":"Search engine","score":0.20529106259346008}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.8505758047103882},{"id":"https://openalex.org/C192028432","wikidata":"https://www.wikidata.org/wiki/Q845739","display_name":"Query language","level":2,"score":0.6235235333442688},{"id":"https://openalex.org/C164120249","wikidata":"https://www.wikidata.org/wiki/Q995982","display_name":"Web search query","level":3,"score":0.5490255951881409},{"id":"https://openalex.org/C118689300","wikidata":"https://www.wikidata.org/wiki/Q7978614","display_name":"Web query classification","level":4,"score":0.5303282141685486},{"id":"https://openalex.org/C165696696","wikidata":"https://www.wikidata.org/wiki/Q11287","display_name":"Exploit","level":2,"score":0.5107024312019348},{"id":"https://openalex.org/C132525143","wikidata":"https://www.wikidata.org/wiki/Q141488","display_name":"Graph","level":2,"score":0.48730456829071045},{"id":"https://openalex.org/C124304363","wikidata":"https://www.wikidata.org/wiki/Q673661","display_name":"Abstraction","level":2,"score":0.4772084355354309},{"id":"https://openalex.org/C23123220","wikidata":"https://www.wikidata.org/wiki/Q816826","display_name":"Information retrieval","level":1,"score":0.46676915884017944},{"id":"https://openalex.org/C2987255567","wikidata":"https://www.wikidata.org/wiki/Q33002955","display_name":"Knowledge graph","level":2,"score":0.46005839109420776},{"id":"https://openalex.org/C24028149","wikidata":"https://www.wikidata.org/wiki/Q7094056","display_name":"Online aggregation","level":5,"score":0.43839186429977417},{"id":"https://openalex.org/C147358964","wikidata":"https://www.wikidata.org/wiki/Q1200992","display_name":"Abstraction layer","level":3,"score":0.4252033531665802},{"id":"https://openalex.org/C176225458","wikidata":"https://www.wikidata.org/wiki/Q595971","display_name":"Graph database","level":3,"score":0.41805270314216614},{"id":"https://openalex.org/C136764020","wikidata":"https://www.wikidata.org/wiki/Q466","display_name":"World Wide Web","level":1,"score":0.369152307510376},{"id":"https://openalex.org/C2777904410","wikidata":"https://www.wikidata.org/wiki/Q7397","display_name":"Software","level":2,"score":0.3411633372306824},{"id":"https://openalex.org/C80444323","wikidata":"https://www.wikidata.org/wiki/Q2878974","display_name":"Theoretical computer science","level":1,"score":0.32051384449005127},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.2939625680446625},{"id":"https://openalex.org/C97854310","wikidata":"https://www.wikidata.org/wiki/Q19541","display_name":"Search engine","level":2,"score":0.20529106259346008},{"id":"https://openalex.org/C138885662","wikidata":"https://www.wikidata.org/wiki/Q5891","display_name":"Philosophy","level":0,"score":0.0},{"id":"https://openalex.org/C38652104","wikidata":"https://www.wikidata.org/wiki/Q3510521","display_name":"Computer security","level":1,"score":0.0},{"id":"https://openalex.org/C111472728","wikidata":"https://www.wikidata.org/wiki/Q9471","display_name":"Epistemology","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D010363","descriptor_name":"Pattern Recognition, Automated","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D010363","descriptor_name":"Pattern Recognition, Automated","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D010363","descriptor_name":"Pattern Recognition, Automated","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016208","descriptor_name":"Databases, Factual","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016208","descriptor_name":"Databases, Factual","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016208","descriptor_name":"Databases, Factual","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":3,"locations":[{"id":"doi:10.1093/bioinformatics/btz604","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btz604","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/35/24/5382/48977655/bioinformatics_35_24_5382.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},{"id":"pmid:31410449","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/31410449","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics (Oxford, England)","raw_type":null},{"id":"pmh:oai:europepmc.org:5915410","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/6954664","pdf_url":null,"source":{"id":"https://openalex.org/S4306400806","display_name":"Europe PMC (PubMed Central)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1303153112","host_organization_name":"European Bioinformatics Institute","host_organization_lineage":["https://openalex.org/I1303153112"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1093/bioinformatics/btz604","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btz604","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/35/24/5382/48977655/bioinformatics_35_24_5382.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G2955973780","display_name":null,"funder_award_id":"OT2R002514","funder_id":"https://openalex.org/F4320332161","funder_display_name":"National Institutes of Health"},{"id":"https://openalex.org/G6736210032","display_name":null,"funder_award_id":"OT3TR002020","funder_id":"https://openalex.org/F4320332161","funder_display_name":"National Institutes of Health"},{"id":"https://openalex.org/G962485104","display_name":null,"funder_award_id":"OT3TR002020","funder_id":"https://openalex.org/F4320337472","funder_display_name":"National Center for Advancing Translational Sciences"}],"funders":[{"id":"https://openalex.org/F4320332161","display_name":"National Institutes of Health","ror":"https://ror.org/01cwqze88"},{"id":"https://openalex.org/F4320337472","display_name":"National Center for Advancing Translational Sciences","ror":"https://ror.org/04pw6fb54"}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2968353232.pdf","grobid_xml":"https://content.openalex.org/works/W2968353232.grobid-xml"},"referenced_works_count":7,"referenced_works":["https://openalex.org/W103340358","https://openalex.org/W2168693035","https://openalex.org/W2588941361","https://openalex.org/W2949311246","https://openalex.org/W4237358891","https://openalex.org/W4247782380","https://openalex.org/W4255757807"],"related_works":["https://openalex.org/W3125756434","https://openalex.org/W1560919561","https://openalex.org/W2096359267","https://openalex.org/W2115824061","https://openalex.org/W203907944","https://openalex.org/W2006459955","https://openalex.org/W2554271401","https://openalex.org/W2041106684","https://openalex.org/W4281289408","https://openalex.org/W2066513365"],"abstract_inverted_index":{"SUMMARY:":[0],"Knowledge":[1,152,188,197],"graphs":[2],"(KGs)":[3],"are":[4,23,70,212,226],"quickly":[5],"becoming":[6],"a":[7,27,98,119,123],"common-place":[8],"tool":[9],"for":[10,73,136,183,207],"storing":[11],"relationships":[12],"between":[13],"entities":[14],"from":[15,220],"which":[16],"higher-level":[17],"reasoning":[18],"can":[19,33,96,190,199],"be":[20,34,191,200],"conducted.":[21],"KGs":[22,135,166],"typically":[24],"stored":[25],"in":[26,59,85,138,151],"graph-database":[28,31],"format,":[29],"and":[30,62,65,115,141,159,167,170,205,209],"queries":[32],"used":[35],"to":[36,110,126,130,162],"answer":[37],"questions":[38],"of":[39,56,67,87,102,104,118,134,179,185],"interest":[40],"that":[41],"have":[42],"been":[43],"posed":[44],"by":[45],"users":[46],"such":[47],"as":[48,155],"biomedical":[49,139],"researchers.":[50],"For":[51,90],"simple":[52],"queries,":[53,75],"the":[54,60,63,88,108,132,180,186,215],"inclusion":[55],"direct":[57],"connections":[58],"KG":[61,99,121],"storage":[64],"analysis":[66],"query":[68,95,105,165,172],"results":[69],"straightforward;":[71],"however,":[72],"complex":[74,94,120],"these":[76],"capabilities":[77],"become":[78],"exponentially":[79],"more":[80,163],"challenging":[81],"with":[82,100],"each":[83],"increase":[84],"complexity":[86],"query.":[89],"instance,":[91],"one":[92],"relatively":[93],"yield":[97],"hundreds":[101],"thousands":[103],"results.":[106,173],"Thus,":[107],"ability":[109],"efficiently":[111],"query,":[112],"store,":[113,168],"rank":[114,169],"explore":[116,171],"sub-graphs":[117],"represents":[122],"major":[124],"challenge":[125],"any":[127],"effort":[128],"designed":[129],"exploit":[131],"use":[133],"applications":[137],"research":[140],"other":[142],"domains.":[143],"We":[144],"present":[145],"Reasoning":[146],"Over":[147],"Biomedical":[148],"Objects":[149],"linked":[150],"Oriented":[153],"Pathways":[154],"an":[156],"abstraction":[157],"layer":[158],"user":[160],"interface":[161],"easily":[164],"AVAILABILITY":[174],"AND":[175],"IMPLEMENTATION:":[176],"An":[177],"instance":[178],"ROBOKOP":[181,187,196,211],"UI":[182],"exploration":[184],"Graph":[189,198],"found":[192],"at":[193,202,228],"http://robokop.renci.org.":[194],"The":[195],"accessed":[201],"http://robokopkg.renci.org.":[203],"Code":[204],"instructions":[206],"building":[208],"deploying":[210],"available":[213,227],"under":[214],"MIT":[216],"open":[217],"software":[218],"license":[219],"https://github.com/NCATS-Gamma/robokop.":[221],"SUPPLEMENTARY":[222],"INFORMATION:":[223],"Supplementary":[224],"data":[225],"Bioinformatics":[229],"online.":[230]},"counts_by_year":[{"year":2026,"cited_by_count":2},{"year":2025,"cited_by_count":8},{"year":2024,"cited_by_count":7},{"year":2023,"cited_by_count":5},{"year":2022,"cited_by_count":16},{"year":2021,"cited_by_count":7},{"year":2020,"cited_by_count":6},{"year":2019,"cited_by_count":1}],"updated_date":"2026-04-29T09:16:38.111599","created_date":"2025-10-10T00:00:00"}
