{"id":"https://openalex.org/W2959745021","doi":"https://doi.org/10.1093/bioinformatics/btz550","title":"HDX-Viewer: interactive 3D visualization of hydrogen\u2013deuterium exchange data","display_name":"HDX-Viewer: interactive 3D visualization of hydrogen\u2013deuterium exchange data","publication_year":2019,"publication_date":"2019-07-08","ids":{"openalex":"https://openalex.org/W2959745021","doi":"https://doi.org/10.1093/bioinformatics/btz550","mag":"2959745021","pmid":"https://pubmed.ncbi.nlm.nih.gov/31287496"},"language":"en","primary_location":{"id":"doi:10.1093/bioinformatics/btz550","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btz550","pdf_url":"https://watermark.silverchair.com/btz550.pdf?token=AQECAHi208BE49Ooan9kkhW_Ercy7Dm3ZL_9Cf3qfKAc485ysgAAAsAwggK8BgkqhkiG9w0BBwagggKtMIICqQIBADCCAqIGCSqGSIb3DQEHATAeBglghkgBZQMEAS4wEQQM8M1xVdTJ2w2uuUR2AgEQgIICc24cXD7mhYx9NM6UY7dXlFQnrnsTKmqYWaSp9dBxeg43p16q7cASreYnahOJ7xwlb_5WzFd7DBoplOFuHL4qNRFjyyYfHUuB9dJ5iG9f-XNB0H0yzc7teSM2z0TO27FUdg5KCh1GbXXVPpLW0UfxmmYBBGjQhWcT_8aBaiKaeyCFfxPVwgpNYRr0Gtgf3Ng9ky0l5BcXN8jD9X9w0gX3IkkwgT40E5oT7TK-LiavVYRpyoaTyDfXyC59YZW0Cf-BhOdafsRBst8aTDhqRG2IRc1Gt15Pwo8Kful2EIMSJ9idgzfWYK-xs0WzW4plIXJgnI97btB5p2-A4KgBpsbQRtFC2J5QWU-eJJy8R66ORWm7qH0ZToIuKvkyCJHm_sbr1C47jJaB5TMjR8rpAzDM2HT5FoejBS7jzK-EN9oSziYmPzTxt0Df0evoJg2aadKzLcndDjkJ4Z2lNvh2frZEb1eGkWLBo6gSq7WDF0QrKgoMMzStgAheDxbOu-CP5YI75PuFRaGqBCTPZvokuQgmUTpwI7HEXOEvYkaZLpsWpXW8og09LCRK64FQ0DbZKM9yMDMfQg-HxRs56DM-uHaQM3US0qqWRAOG3XpJAn2mJawg2LsiWSDllxZKN76XH22TmNRhqGs17Dww63sS6qL1x5K30oA-jDRmrPKmvpAmHTtslRiRaOoKGf1cfvpbbhVy_SRyW5zXfzVD5fMDt3UCB08S79cvsJTOoumYIGhcf5T_K_uwN681mNevjaIsc9gQhQBg6DG1s3WAdCCsqZE0PVGcrVRUiA5yg405nmJeKxXk_BI7e2-f7nFzAmuha0f5ZDiL7w","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"hybrid","oa_url":"https://watermark.silverchair.com/btz550.pdf?token=AQECAHi208BE49Ooan9kkhW_Ercy7Dm3ZL_9Cf3qfKAc485ysgAAAsAwggK8BgkqhkiG9w0BBwagggKtMIICqQIBADCCAqIGCSqGSIb3DQEHATAeBglghkgBZQMEAS4wEQQM8M1xVdTJ2w2uuUR2AgEQgIICc24cXD7mhYx9NM6UY7dXlFQnrnsTKmqYWaSp9dBxeg43p16q7cASreYnahOJ7xwlb_5WzFd7DBoplOFuHL4qNRFjyyYfHUuB9dJ5iG9f-XNB0H0yzc7teSM2z0TO27FUdg5KCh1GbXXVPpLW0UfxmmYBBGjQhWcT_8aBaiKaeyCFfxPVwgpNYRr0Gtgf3Ng9ky0l5BcXN8jD9X9w0gX3IkkwgT40E5oT7TK-LiavVYRpyoaTyDfXyC59YZW0Cf-BhOdafsRBst8aTDhqRG2IRc1Gt15Pwo8Kful2EIMSJ9idgzfWYK-xs0WzW4plIXJgnI97btB5p2-A4KgBpsbQRtFC2J5QWU-eJJy8R66ORWm7qH0ZToIuKvkyCJHm_sbr1C47jJaB5TMjR8rpAzDM2HT5FoejBS7jzK-EN9oSziYmPzTxt0Df0evoJg2aadKzLcndDjkJ4Z2lNvh2frZEb1eGkWLBo6gSq7WDF0QrKgoMMzStgAheDxbOu-CP5YI75PuFRaGqBCTPZvokuQgmUTpwI7HEXOEvYkaZLpsWpXW8og09LCRK64FQ0DbZKM9yMDMfQg-HxRs56DM-uHaQM3US0qqWRAOG3XpJAn2mJawg2LsiWSDllxZKN76XH22TmNRhqGs17Dww63sS6qL1x5K30oA-jDRmrPKmvpAmHTtslRiRaOoKGf1cfvpbbhVy_SRyW5zXfzVD5fMDt3UCB08S79cvsJTOoumYIGhcf5T_K_uwN681mNevjaIsc9gQhQBg6DG1s3WAdCCsqZE0PVGcrVRUiA5yg405nmJeKxXk_BI7e2-f7nFzAmuha0f5ZDiL7w","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5088363557","display_name":"David Bouyssi\u00e9","orcid":"https://orcid.org/0000-0002-0847-4759"},"institutions":[{"id":"https://openalex.org/I1294671590","display_name":"Centre National de la Recherche Scientifique","ror":"https://ror.org/02feahw73","country_code":"FR","type":"government","lineage":["https://openalex.org/I1294671590"]},{"id":"https://openalex.org/I134560555","display_name":"Universit\u00e9 Toulouse III - Paul Sabatier","ror":"https://ror.org/02v6kpv12","country_code":"FR","type":"education","lineage":["https://openalex.org/I134560555"]},{"id":"https://openalex.org/I17866349","display_name":"Universit\u00e9 F\u00e9d\u00e9rale de Toulouse Midi-Pyr\u00e9n\u00e9es","ror":"https://ror.org/004raaa70","country_code":"FR","type":"education","lineage":["https://openalex.org/I17866349"]},{"id":"https://openalex.org/I4210099749","display_name":"Institut de Pharmacologie et de Biologie Structurale","ror":"https://ror.org/016zvc994","country_code":"FR","type":"facility","lineage":["https://openalex.org/I1294671590","https://openalex.org/I1294671590","https://openalex.org/I4210096427","https://openalex.org/I4210099749","https://openalex.org/I4405258862"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"David Bouyssi\u00e9","raw_affiliation_strings":["Institut de Pharmacologie et de Biologie Structurale, Universit\u00e9 de Toulouse, CNRS , UPS, Toulouse, France"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Institut de Pharmacologie et de Biologie Structurale, Universit\u00e9 de Toulouse, CNRS , UPS, Toulouse, France","institution_ids":["https://openalex.org/I17866349","https://openalex.org/I134560555","https://openalex.org/I4210099749","https://openalex.org/I1294671590"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5035913128","display_name":"Jean Lesn\u00e9","orcid":"https://orcid.org/0000-0003-3632-3859"},"institutions":[{"id":"https://openalex.org/I1294671590","display_name":"Centre National de la Recherche Scientifique","ror":"https://ror.org/02feahw73","country_code":"FR","type":"government","lineage":["https://openalex.org/I1294671590"]},{"id":"https://openalex.org/I134560555","display_name":"Universit\u00e9 Toulouse III - Paul Sabatier","ror":"https://ror.org/02v6kpv12","country_code":"FR","type":"education","lineage":["https://openalex.org/I134560555"]},{"id":"https://openalex.org/I17866349","display_name":"Universit\u00e9 F\u00e9d\u00e9rale de Toulouse Midi-Pyr\u00e9n\u00e9es","ror":"https://ror.org/004raaa70","country_code":"FR","type":"education","lineage":["https://openalex.org/I17866349"]},{"id":"https://openalex.org/I4210099749","display_name":"Institut de Pharmacologie et de Biologie Structurale","ror":"https://ror.org/016zvc994","country_code":"FR","type":"facility","lineage":["https://openalex.org/I1294671590","https://openalex.org/I1294671590","https://openalex.org/I4210096427","https://openalex.org/I4210099749","https://openalex.org/I4405258862"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Jean Lesne","raw_affiliation_strings":["Institut de Pharmacologie et de Biologie Structurale, Universit\u00e9 de Toulouse, CNRS , UPS, Toulouse, France"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Institut de Pharmacologie et de Biologie Structurale, Universit\u00e9 de Toulouse, CNRS , UPS, Toulouse, France","institution_ids":["https://openalex.org/I17866349","https://openalex.org/I134560555","https://openalex.org/I4210099749","https://openalex.org/I1294671590"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5032011511","display_name":"Marie Locard\u2010Paulet","orcid":"https://orcid.org/0000-0003-2879-9224"},"institutions":[{"id":"https://openalex.org/I1294671590","display_name":"Centre National de la Recherche Scientifique","ror":"https://ror.org/02feahw73","country_code":"FR","type":"government","lineage":["https://openalex.org/I1294671590"]},{"id":"https://openalex.org/I134560555","display_name":"Universit\u00e9 Toulouse III - Paul Sabatier","ror":"https://ror.org/02v6kpv12","country_code":"FR","type":"education","lineage":["https://openalex.org/I134560555"]},{"id":"https://openalex.org/I17866349","display_name":"Universit\u00e9 F\u00e9d\u00e9rale de Toulouse Midi-Pyr\u00e9n\u00e9es","ror":"https://ror.org/004raaa70","country_code":"FR","type":"education","lineage":["https://openalex.org/I17866349"]},{"id":"https://openalex.org/I4210099749","display_name":"Institut de Pharmacologie et de Biologie Structurale","ror":"https://ror.org/016zvc994","country_code":"FR","type":"facility","lineage":["https://openalex.org/I1294671590","https://openalex.org/I1294671590","https://openalex.org/I4210096427","https://openalex.org/I4210099749","https://openalex.org/I4405258862"]}],"countries":["FR"],"is_corresponding":true,"raw_author_name":"Marie Locard-Paulet","raw_affiliation_strings":["Institut de Pharmacologie et de Biologie Structurale, Universit\u00e9 de Toulouse, CNRS , UPS, Toulouse, France"],"raw_orcid":"https://orcid.org/0000-0003-2879-9224","affiliations":[{"raw_affiliation_string":"Institut de Pharmacologie et de Biologie Structurale, Universit\u00e9 de Toulouse, CNRS , UPS, Toulouse, France","institution_ids":["https://openalex.org/I17866349","https://openalex.org/I134560555","https://openalex.org/I4210099749","https://openalex.org/I1294671590"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5059413679","display_name":"Renaud Albigot","orcid":null},"institutions":[{"id":"https://openalex.org/I1294671590","display_name":"Centre National de la Recherche Scientifique","ror":"https://ror.org/02feahw73","country_code":"FR","type":"government","lineage":["https://openalex.org/I1294671590"]},{"id":"https://openalex.org/I134560555","display_name":"Universit\u00e9 Toulouse III - Paul Sabatier","ror":"https://ror.org/02v6kpv12","country_code":"FR","type":"education","lineage":["https://openalex.org/I134560555"]},{"id":"https://openalex.org/I17866349","display_name":"Universit\u00e9 F\u00e9d\u00e9rale de Toulouse Midi-Pyr\u00e9n\u00e9es","ror":"https://ror.org/004raaa70","country_code":"FR","type":"education","lineage":["https://openalex.org/I17866349"]},{"id":"https://openalex.org/I4210099749","display_name":"Institut de Pharmacologie et de Biologie Structurale","ror":"https://ror.org/016zvc994","country_code":"FR","type":"facility","lineage":["https://openalex.org/I1294671590","https://openalex.org/I1294671590","https://openalex.org/I4210096427","https://openalex.org/I4210099749","https://openalex.org/I4405258862"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Renaud Albigot","raw_affiliation_strings":["Institut de Pharmacologie et de Biologie Structurale, Universit\u00e9 de Toulouse, CNRS , UPS, Toulouse, France"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Institut de Pharmacologie et de Biologie Structurale, Universit\u00e9 de Toulouse, CNRS , UPS, Toulouse, France","institution_ids":["https://openalex.org/I17866349","https://openalex.org/I134560555","https://openalex.org/I4210099749","https://openalex.org/I1294671590"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5069577241","display_name":"Odile Burlet\u2010Schiltz","orcid":"https://orcid.org/0000-0002-3606-2356"},"institutions":[{"id":"https://openalex.org/I1294671590","display_name":"Centre National de la Recherche Scientifique","ror":"https://ror.org/02feahw73","country_code":"FR","type":"government","lineage":["https://openalex.org/I1294671590"]},{"id":"https://openalex.org/I134560555","display_name":"Universit\u00e9 Toulouse III - Paul Sabatier","ror":"https://ror.org/02v6kpv12","country_code":"FR","type":"education","lineage":["https://openalex.org/I134560555"]},{"id":"https://openalex.org/I17866349","display_name":"Universit\u00e9 F\u00e9d\u00e9rale de Toulouse Midi-Pyr\u00e9n\u00e9es","ror":"https://ror.org/004raaa70","country_code":"FR","type":"education","lineage":["https://openalex.org/I17866349"]},{"id":"https://openalex.org/I4210099749","display_name":"Institut de Pharmacologie et de Biologie Structurale","ror":"https://ror.org/016zvc994","country_code":"FR","type":"facility","lineage":["https://openalex.org/I1294671590","https://openalex.org/I1294671590","https://openalex.org/I4210096427","https://openalex.org/I4210099749","https://openalex.org/I4405258862"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Odile Burlet-Schiltz","raw_affiliation_strings":["Institut de Pharmacologie et de Biologie Structurale, Universit\u00e9 de Toulouse, CNRS , UPS, Toulouse, France"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Institut de Pharmacologie et de Biologie Structurale, Universit\u00e9 de Toulouse, CNRS , UPS, Toulouse, France","institution_ids":["https://openalex.org/I17866349","https://openalex.org/I134560555","https://openalex.org/I4210099749","https://openalex.org/I1294671590"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5062431644","display_name":"Julien Marcoux","orcid":"https://orcid.org/0000-0001-7321-7436"},"institutions":[{"id":"https://openalex.org/I1294671590","display_name":"Centre National de la Recherche Scientifique","ror":"https://ror.org/02feahw73","country_code":"FR","type":"government","lineage":["https://openalex.org/I1294671590"]},{"id":"https://openalex.org/I134560555","display_name":"Universit\u00e9 Toulouse III - Paul Sabatier","ror":"https://ror.org/02v6kpv12","country_code":"FR","type":"education","lineage":["https://openalex.org/I134560555"]},{"id":"https://openalex.org/I17866349","display_name":"Universit\u00e9 F\u00e9d\u00e9rale de Toulouse Midi-Pyr\u00e9n\u00e9es","ror":"https://ror.org/004raaa70","country_code":"FR","type":"education","lineage":["https://openalex.org/I17866349"]},{"id":"https://openalex.org/I4210099749","display_name":"Institut de Pharmacologie et de Biologie Structurale","ror":"https://ror.org/016zvc994","country_code":"FR","type":"facility","lineage":["https://openalex.org/I1294671590","https://openalex.org/I1294671590","https://openalex.org/I4210096427","https://openalex.org/I4210099749","https://openalex.org/I4405258862"]}],"countries":["FR"],"is_corresponding":true,"raw_author_name":"Julien Marcoux","raw_affiliation_strings":["Institut de Pharmacologie et de Biologie Structurale, Universit\u00e9 de Toulouse, CNRS , UPS, Toulouse, France"],"raw_orcid":"https://orcid.org/0000-0001-7321-7436","affiliations":[{"raw_affiliation_string":"Institut de Pharmacologie et de Biologie Structurale, Universit\u00e9 de Toulouse, CNRS , UPS, Toulouse, France","institution_ids":["https://openalex.org/I17866349","https://openalex.org/I134560555","https://openalex.org/I4210099749","https://openalex.org/I1294671590"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":4,"corresponding_author_ids":["https://openalex.org/A5032011511","https://openalex.org/A5062431644"],"corresponding_institution_ids":["https://openalex.org/I1294671590","https://openalex.org/I134560555","https://openalex.org/I17866349","https://openalex.org/I4210099749"],"apc_list":{"value":3618,"currency":"USD","value_usd":3618},"apc_paid":{"value":3618,"currency":"USD","value_usd":3618},"fwci":1.0142,"has_fulltext":true,"cited_by_count":34,"citation_normalized_percentile":{"value":0.70420085,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":99},"biblio":{"volume":"35","issue":"24","first_page":"5331","last_page":"5333"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T13561","display_name":"Chemical Reactions and Isotopes","score":0.49559998512268066,"subfield":{"id":"https://openalex.org/subfields/3003","display_name":"Pharmaceutical Science"},"field":{"id":"https://openalex.org/fields/30","display_name":"Pharmacology, Toxicology and Pharmaceutics"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T13561","display_name":"Chemical Reactions and Isotopes","score":0.49559998512268066,"subfield":{"id":"https://openalex.org/subfields/3003","display_name":"Pharmaceutical Science"},"field":{"id":"https://openalex.org/fields/30","display_name":"Pharmacology, Toxicology and Pharmaceutics"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10683","display_name":"Mass Spectrometry Techniques and Applications","score":0.09290000051259995,"subfield":{"id":"https://openalex.org/subfields/1607","display_name":"Spectroscopy"},"field":{"id":"https://openalex.org/fields/16","display_name":"Chemistry"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10211","display_name":"Computational Drug Discovery Methods","score":0.0771000012755394,"subfield":{"id":"https://openalex.org/subfields/1703","display_name":"Computational Theory and Mathematics"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/visualization","display_name":"Visualization","score":0.7584174871444702},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6483545899391174},{"id":"https://openalex.org/keywords/interactive-visualization","display_name":"Interactive visualization","score":0.5000591278076172},{"id":"https://openalex.org/keywords/data-visualization","display_name":"Data visualization","score":0.4926455616950989},{"id":"https://openalex.org/keywords/hydrogen\u2013deuterium-exchange","display_name":"Hydrogen\u2013deuterium exchange","score":0.46035003662109375},{"id":"https://openalex.org/keywords/deuterium","display_name":"Deuterium","score":0.45656001567840576},{"id":"https://openalex.org/keywords/software","display_name":"Software","score":0.4231272339820862},{"id":"https://openalex.org/keywords/computer-graphics","display_name":"Computer graphics (images)","score":0.4189666509628296},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.27142009139060974},{"id":"https://openalex.org/keywords/programming-language","display_name":"Programming language","score":0.13911741971969604},{"id":"https://openalex.org/keywords/physics","display_name":"Physics","score":0.10335305333137512},{"id":"https://openalex.org/keywords/nuclear-physics","display_name":"Nuclear physics","score":0.07950085401535034}],"concepts":[{"id":"https://openalex.org/C36464697","wikidata":"https://www.wikidata.org/wiki/Q451553","display_name":"Visualization","level":2,"score":0.7584174871444702},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6483545899391174},{"id":"https://openalex.org/C64073096","wikidata":"https://www.wikidata.org/wiki/Q451553","display_name":"Interactive visualization","level":3,"score":0.5000591278076172},{"id":"https://openalex.org/C172367668","wikidata":"https://www.wikidata.org/wiki/Q6504956","display_name":"Data visualization","level":3,"score":0.4926455616950989},{"id":"https://openalex.org/C167569220","wikidata":"https://www.wikidata.org/wiki/Q5954985","display_name":"Hydrogen\u2013deuterium exchange","level":3,"score":0.46035003662109375},{"id":"https://openalex.org/C58364064","wikidata":"https://www.wikidata.org/wiki/Q102296","display_name":"Deuterium","level":2,"score":0.45656001567840576},{"id":"https://openalex.org/C2777904410","wikidata":"https://www.wikidata.org/wiki/Q7397","display_name":"Software","level":2,"score":0.4231272339820862},{"id":"https://openalex.org/C121684516","wikidata":"https://www.wikidata.org/wiki/Q7600677","display_name":"Computer graphics (images)","level":1,"score":0.4189666509628296},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.27142009139060974},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.13911741971969604},{"id":"https://openalex.org/C121332964","wikidata":"https://www.wikidata.org/wiki/Q413","display_name":"Physics","level":0,"score":0.10335305333137512},{"id":"https://openalex.org/C185544564","wikidata":"https://www.wikidata.org/wiki/Q81197","display_name":"Nuclear physics","level":1,"score":0.07950085401535034}],"mesh":[{"descriptor_ui":"D003903","descriptor_name":"Deuterium","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003903","descriptor_name":"Deuterium","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003903","descriptor_name":"Deuterium","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006859","descriptor_name":"Hydrogen","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006859","descriptor_name":"Hydrogen","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006859","descriptor_name":"Hydrogen","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D021621","descriptor_name":"Imaging, Three-Dimensional","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D021621","descriptor_name":"Imaging, Three-Dimensional","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D021621","descriptor_name":"Imaging, Three-Dimensional","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D041961","descriptor_name":"Deuterium Exchange Measurement","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D041961","descriptor_name":"Deuterium Exchange Measurement","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D041961","descriptor_name":"Deuterium Exchange Measurement","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true}],"locations_count":6,"locations":[{"id":"doi:10.1093/bioinformatics/btz550","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btz550","pdf_url":"https://watermark.silverchair.com/btz550.pdf?token=AQECAHi208BE49Ooan9kkhW_Ercy7Dm3ZL_9Cf3qfKAc485ysgAAAsAwggK8BgkqhkiG9w0BBwagggKtMIICqQIBADCCAqIGCSqGSIb3DQEHATAeBglghkgBZQMEAS4wEQQM8M1xVdTJ2w2uuUR2AgEQgIICc24cXD7mhYx9NM6UY7dXlFQnrnsTKmqYWaSp9dBxeg43p16q7cASreYnahOJ7xwlb_5WzFd7DBoplOFuHL4qNRFjyyYfHUuB9dJ5iG9f-XNB0H0yzc7teSM2z0TO27FUdg5KCh1GbXXVPpLW0UfxmmYBBGjQhWcT_8aBaiKaeyCFfxPVwgpNYRr0Gtgf3Ng9ky0l5BcXN8jD9X9w0gX3IkkwgT40E5oT7TK-LiavVYRpyoaTyDfXyC59YZW0Cf-BhOdafsRBst8aTDhqRG2IRc1Gt15Pwo8Kful2EIMSJ9idgzfWYK-xs0WzW4plIXJgnI97btB5p2-A4KgBpsbQRtFC2J5QWU-eJJy8R66ORWm7qH0ZToIuKvkyCJHm_sbr1C47jJaB5TMjR8rpAzDM2HT5FoejBS7jzK-EN9oSziYmPzTxt0Df0evoJg2aadKzLcndDjkJ4Z2lNvh2frZEb1eGkWLBo6gSq7WDF0QrKgoMMzStgAheDxbOu-CP5YI75PuFRaGqBCTPZvokuQgmUTpwI7HEXOEvYkaZLpsWpXW8og09LCRK64FQ0DbZKM9yMDMfQg-HxRs56DM-uHaQM3US0qqWRAOG3XpJAn2mJawg2LsiWSDllxZKN76XH22TmNRhqGs17Dww63sS6qL1x5K30oA-jDRmrPKmvpAmHTtslRiRaOoKGf1cfvpbbhVy_SRyW5zXfzVD5fMDt3UCB08S79cvsJTOoumYIGhcf5T_K_uwN681mNevjaIsc9gQhQBg6DG1s3WAdCCsqZE0PVGcrVRUiA5yg405nmJeKxXk_BI7e2-f7nFzAmuha0f5ZDiL7w","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},{"id":"pmid:31287496","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/31287496","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics (Oxford, England)","raw_type":null},{"id":"pmh:oai:pure.atira.dk:publications/96db5d95-56ab-4af2-bb18-c1006dbede7f","is_oa":true,"landing_page_url":"https://curis.ku.dk/portal/da/publications/hdxviewer(96db5d95-56ab-4af2-bb18-c1006dbede7f).html","pdf_url":"https://curis.ku.dk/ws/files/235922135/btz550.pdf","source":{"id":"https://openalex.org/S4306401983","display_name":"Research at the University of Copenhagen (University of Copenhagen)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I124055696","host_organization_name":"University of Copenhagen","host_organization_lineage":["https://openalex.org/I124055696"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Bouyssie , D , Lesne , J , Locard-Paulet , M , Albigot , R , Burlet-Schiltz , O & Marcoux , J 2019 , ' HDX-Viewer : interactive 3D visualization of hydrogen-deuterium exchange data ' , Bioinformatics , vol. 35 , no. 24 , pp. 5331-5333 . https://doi.org/10.1093/bioinformatics/btz550","raw_type":"article"},{"id":"pmh:oai:HAL:hal-02332392v1","is_oa":false,"landing_page_url":"https://hal.science/hal-02332392","pdf_url":null,"source":{"id":"https://openalex.org/S4306402512","display_name":"HAL (Le Centre pour la Communication Scientifique Directe)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1294671590","host_organization_name":"Centre National de la Recherche Scientifique","host_organization_lineage":["https://openalex.org/I1294671590"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Bioinformatics, 2019, 35 (24), pp.5331 - 5333. &#x27E8;10.1093/bioinformatics/btz550&#x27E9;","raw_type":"info:eu-repo/semantics/article"},{"id":"pmh:oai:europepmc.org:5915395","is_oa":false,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/6954641","pdf_url":null,"source":{"id":"https://openalex.org/S4306400806","display_name":"Europe PMC (PubMed Central)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1303153112","host_organization_name":"European Bioinformatics Institute","host_organization_lineage":["https://openalex.org/I1303153112"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Text"},{"id":"pmh:oai:pure.atira.dk:openaire_cris_publications/96db5d95-56ab-4af2-bb18-c1006dbede7f","is_oa":true,"landing_page_url":"https://researchprofiles.ku.dk/da/publications/96db5d95-56ab-4af2-bb18-c1006dbede7f","pdf_url":null,"source":{"id":"https://openalex.org/S4306401983","display_name":"Research at the University of Copenhagen (University of Copenhagen)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I124055696","host_organization_name":"University of Copenhagen","host_organization_lineage":["https://openalex.org/I124055696"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Bouyssie , D , Lesne , J , Locard-Paulet , M , Albigot , R , Burlet-Schiltz , O & Marcoux , J 2019 , ' HDX-Viewer : interactive 3D visualization of hydrogen-deuterium exchange data ' , Bioinformatics , vol. 35 , no. 24 , pp. 5331-5333 . https://doi.org/10.1093/bioinformatics/btz550","raw_type":"article"}],"best_oa_location":{"id":"doi:10.1093/bioinformatics/btz550","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btz550","pdf_url":"https://watermark.silverchair.com/btz550.pdf?token=AQECAHi208BE49Ooan9kkhW_Ercy7Dm3ZL_9Cf3qfKAc485ysgAAAsAwggK8BgkqhkiG9w0BBwagggKtMIICqQIBADCCAqIGCSqGSIb3DQEHATAeBglghkgBZQMEAS4wEQQM8M1xVdTJ2w2uuUR2AgEQgIICc24cXD7mhYx9NM6UY7dXlFQnrnsTKmqYWaSp9dBxeg43p16q7cASreYnahOJ7xwlb_5WzFd7DBoplOFuHL4qNRFjyyYfHUuB9dJ5iG9f-XNB0H0yzc7teSM2z0TO27FUdg5KCh1GbXXVPpLW0UfxmmYBBGjQhWcT_8aBaiKaeyCFfxPVwgpNYRr0Gtgf3Ng9ky0l5BcXN8jD9X9w0gX3IkkwgT40E5oT7TK-LiavVYRpyoaTyDfXyC59YZW0Cf-BhOdafsRBst8aTDhqRG2IRc1Gt15Pwo8Kful2EIMSJ9idgzfWYK-xs0WzW4plIXJgnI97btB5p2-A4KgBpsbQRtFC2J5QWU-eJJy8R66ORWm7qH0ZToIuKvkyCJHm_sbr1C47jJaB5TMjR8rpAzDM2HT5FoejBS7jzK-EN9oSziYmPzTxt0Df0evoJg2aadKzLcndDjkJ4Z2lNvh2frZEb1eGkWLBo6gSq7WDF0QrKgoMMzStgAheDxbOu-CP5YI75PuFRaGqBCTPZvokuQgmUTpwI7HEXOEvYkaZLpsWpXW8og09LCRK64FQ0DbZKM9yMDMfQg-HxRs56DM-uHaQM3US0qqWRAOG3XpJAn2mJawg2LsiWSDllxZKN76XH22TmNRhqGs17Dww63sS6qL1x5K30oA-jDRmrPKmvpAmHTtslRiRaOoKGf1cfvpbbhVy_SRyW5zXfzVD5fMDt3UCB08S79cvsJTOoumYIGhcf5T_K_uwN681mNevjaIsc9gQhQBg6DG1s3WAdCCsqZE0PVGcrVRUiA5yg405nmJeKxXk_BI7e2-f7nFzAmuha0f5ZDiL7w","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[{"display_name":"Industry, innovation and infrastructure","id":"https://metadata.un.org/sdg/9","score":0.5099999904632568}],"awards":[{"id":"https://openalex.org/G1335398805","display_name":"Infrastructure Fran\u00e7aise de Prot\u00e9omique","funder_award_id":"ANR-10-INBS-0008","funder_id":"https://openalex.org/F4320320883","funder_display_name":"Agence Nationale de la Recherche"},{"id":"https://openalex.org/G1502922282","display_name":null,"funder_award_id":"ANR-10-INBS-08","funder_id":"https://openalex.org/F4320320883","funder_display_name":"Agence Nationale de la Recherche"},{"id":"https://openalex.org/G4282887365","display_name":null,"funder_award_id":"NNF14CC0001","funder_id":"https://openalex.org/F4320322436","funder_display_name":"Novo Nordisk"},{"id":"https://openalex.org/G6662978750","display_name":null,"funder_award_id":"NNF14CC0001","funder_id":"https://openalex.org/F4320325957","funder_display_name":"Novo Nordisk Fonden"},{"id":"https://openalex.org/G7240651115","display_name":null,"funder_award_id":"ANR-10","funder_id":"https://openalex.org/F4320320883","funder_display_name":"Agence Nationale de la Recherche"}],"funders":[{"id":"https://openalex.org/F4320320883","display_name":"Agence Nationale de la Recherche","ror":"https://ror.org/00rbzpz17"},{"id":"https://openalex.org/F4320322436","display_name":"Novo Nordisk","ror":"https://ror.org/0435rc536"},{"id":"https://openalex.org/F4320325957","display_name":"Novo Nordisk Fonden","ror":"https://ror.org/04txyc737"},{"id":"https://openalex.org/F4320328356","display_name":"R\u00e9gion Occitanie Pyr\u00e9n\u00e9es-M\u00e9diterran\u00e9e","ror":null}],"has_content":{"grobid_xml":false,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2959745021.pdf"},"referenced_works_count":16,"referenced_works":["https://openalex.org/W1965079584","https://openalex.org/W1967147564","https://openalex.org/W1977984247","https://openalex.org/W2023505696","https://openalex.org/W2084692275","https://openalex.org/W2094580354","https://openalex.org/W2108674457","https://openalex.org/W2120326808","https://openalex.org/W2466387107","https://openalex.org/W2474169383","https://openalex.org/W2581851121","https://openalex.org/W2806399642","https://openalex.org/W2911948414","https://openalex.org/W2920047938","https://openalex.org/W2951230445","https://openalex.org/W4235940105"],"related_works":["https://openalex.org/W2525453011","https://openalex.org/W2145338618","https://openalex.org/W2006240110","https://openalex.org/W2751110224","https://openalex.org/W2147036980","https://openalex.org/W1510524001","https://openalex.org/W1973315673","https://openalex.org/W2520625499","https://openalex.org/W2996372188","https://openalex.org/W2131473689"],"abstract_inverted_index":{"SUMMARY:":[0],"With":[1],"the":[2,39,135],"advent":[3],"of":[4],"fully":[5],"automated":[6],"sample":[7],"preparation":[8],"robots":[9],"for":[10,23,60],"Hydrogen-Deuterium":[11],"eXchange":[12],"coupled":[13],"to":[14,112],"Mass":[15],"Spectrometry":[16],"(HDX-MS),":[17],"this":[18,75],"method":[19],"has":[20],"become":[21],"paramount":[22],"ligand":[24],"binding":[25],"or":[26,102],"epitope":[27],"mapping":[28],"screening,":[29],"both":[30],"in":[31,106],"academic":[32],"research":[33],"and":[34,49,65,86,109,122,138,142],"biopharmaceutical":[35],"industries.":[36],"However,":[37],"bridging":[38],"gap":[40],"between":[41],"commercial":[42,103],"HDX-MS":[43,88,96,104],"software":[44,105],"(for":[45],"raw":[46],"data":[47,89,97],"interpretation)":[48,62],"molecular":[50,116],"viewers":[51],"(to":[52],"map":[53],"experiment":[54],"results":[55],"onto":[56],"a":[57,99],"3D":[58,115],"structure":[59],"biological":[61,123],"remains":[63],"laborious":[64],"requires":[66],"simple":[67],"but":[68],"sometimes":[69],"limiting":[70],"coding":[71],"skills.":[72],"We":[73],"solved":[74],"bottleneck":[76],"by":[77],"developing":[78],"HDX-Viewer,":[79],"an":[80,113],"open-source":[81],"web-based":[82],"application":[83,93,131],"that":[84],"facilitates":[85],"quickens":[87],"analysis.":[90],"This":[91],"user-friendly":[92],"automatically":[94],"incorporates":[95],"from":[98],"custom":[100],"template":[101],"PDB":[107],"files,":[108],"uploads":[110],"them":[111],"online":[114],"viewer,":[117],"thereby":[118],"facilitating":[119],"their":[120],"visualization":[121],"interpretation.":[124],"AVAILABILITY":[125],"AND":[126],"IMPLEMENTATION:":[127],"The":[128,148],"HDX-Viewer":[129],"web":[130],"is":[132,151],"released":[133],"under":[134],"CeCILL":[136],"(http://www.cecill.info)":[137],"GNU":[139],"LGPL":[140],"licenses":[141],"can":[143],"be":[144],"found":[145],"at":[146,153],"https://masstools.ipbs.fr/hdx-viewer.":[147],"source":[149],"code":[150],"available":[152],"https://github.com/david-bouyssie/hdx-viewer.":[154]},"counts_by_year":[{"year":2026,"cited_by_count":1},{"year":2025,"cited_by_count":8},{"year":2024,"cited_by_count":7},{"year":2023,"cited_by_count":7},{"year":2022,"cited_by_count":3},{"year":2021,"cited_by_count":1},{"year":2020,"cited_by_count":7}],"updated_date":"2026-07-09T07:52:08.696243","created_date":"2025-10-10T00:00:00"}
