{"id":"https://openalex.org/W2951162601","doi":"https://doi.org/10.1093/bioinformatics/btz476","title":"Mycorrhiza: genotype assignment using phylogenetic networks","display_name":"Mycorrhiza: genotype assignment using phylogenetic networks","publication_year":2019,"publication_date":"2019-06-06","ids":{"openalex":"https://openalex.org/W2951162601","doi":"https://doi.org/10.1093/bioinformatics/btz476","mag":"2951162601","pmid":"https://pubmed.ncbi.nlm.nih.gov/31197316"},"language":"en","primary_location":{"id":"doi:10.1093/bioinformatics/btz476","is_oa":false,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btz476","pdf_url":null,"source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["arxiv","crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"green","oa_url":"https://arxiv.org/pdf/2010.09483","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5074184206","display_name":"Jeremy Georges-Filteau","orcid":"https://orcid.org/0000-0002-0352-6468"},"institutions":[{"id":"https://openalex.org/I5023651","display_name":"McGill University","ror":"https://ror.org/01pxwe438","country_code":"CA","type":"education","lineage":["https://openalex.org/I5023651"]}],"countries":["CA"],"is_corresponding":true,"raw_author_name":"Jeremy Georges-Filteau","raw_affiliation_strings":["School of Computer Science, McGill University , Montreal, QC, Canada"],"affiliations":[{"raw_affiliation_string":"School of Computer Science, McGill University , Montreal, QC, Canada","institution_ids":["https://openalex.org/I5023651"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5014203330","display_name":"Richard C. Hamelin","orcid":"https://orcid.org/0000-0003-4006-532X"},"institutions":[{"id":"https://openalex.org/I141945490","display_name":"University of British Columbia","ror":"https://ror.org/03rmrcq20","country_code":"CA","type":"education","lineage":["https://openalex.org/I141945490"]},{"id":"https://openalex.org/I43406934","display_name":"Universit\u00e9 Laval","ror":"https://ror.org/04sjchr03","country_code":"CA","type":"education","lineage":["https://openalex.org/I43406934"]}],"countries":["CA"],"is_corresponding":false,"raw_author_name":"Richard C Hamelin","raw_affiliation_strings":["Department of Forest and Conservation Sciences, The University of British Columbia , Vancouver, BC, Canada","D\u00e9partement des sciences du bois et de la for\u00eat, Universit\u00e9 Laval , Qu\u00e9bec, Canada"],"affiliations":[{"raw_affiliation_string":"Department of Forest and Conservation Sciences, The University of British Columbia , Vancouver, BC, Canada","institution_ids":["https://openalex.org/I141945490"]},{"raw_affiliation_string":"D\u00e9partement des sciences du bois et de la for\u00eat, Universit\u00e9 Laval , Qu\u00e9bec, Canada","institution_ids":["https://openalex.org/I43406934"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5065720651","display_name":"Mathieu Blanchette","orcid":"https://orcid.org/0000-0002-9555-860X"},"institutions":[{"id":"https://openalex.org/I5023651","display_name":"McGill University","ror":"https://ror.org/01pxwe438","country_code":"CA","type":"education","lineage":["https://openalex.org/I5023651"]}],"countries":["CA"],"is_corresponding":false,"raw_author_name":"Mathieu Blanchette","raw_affiliation_strings":["School of Computer Science, McGill University , Montreal, QC, Canada"],"affiliations":[{"raw_affiliation_string":"School of Computer Science, McGill University , Montreal, QC, Canada","institution_ids":["https://openalex.org/I5023651"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":3,"corresponding_author_ids":["https://openalex.org/A5074184206"],"corresponding_institution_ids":["https://openalex.org/I5023651"],"apc_list":{"value":3618,"currency":"USD","value_usd":3618},"apc_paid":null,"fwci":1.1629,"has_fulltext":false,"cited_by_count":5,"citation_normalized_percentile":{"value":0.84463104,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":90,"max":97},"biblio":{"volume":"36","issue":"1","first_page":"212","last_page":"220"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10451","display_name":"Mycorrhizal Fungi and Plant Interactions","score":0.9896000027656555,"subfield":{"id":"https://openalex.org/subfields/1110","display_name":"Plant Science"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10451","display_name":"Mycorrhizal Fungi and Plant Interactions","score":0.9896000027656555,"subfield":{"id":"https://openalex.org/subfields/1110","display_name":"Plant Science"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10012","display_name":"Genetic diversity and population structure","score":0.9878000020980835,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9383000135421753,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/phylogenetic-tree","display_name":"Phylogenetic tree","score":0.810468316078186},{"id":"https://openalex.org/keywords/genotype","display_name":"Genotype","score":0.7089372873306274},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.4948815703392029},{"id":"https://openalex.org/keywords/phylogenetics","display_name":"Phylogenetics","score":0.47573280334472656},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.3892871141433716},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.38732320070266724},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.3496784567832947},{"id":"https://openalex.org/keywords/evolutionary-biology","display_name":"Evolutionary biology","score":0.3492470383644104},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.16818735003471375}],"concepts":[{"id":"https://openalex.org/C193252679","wikidata":"https://www.wikidata.org/wiki/Q242125","display_name":"Phylogenetic tree","level":3,"score":0.810468316078186},{"id":"https://openalex.org/C135763542","wikidata":"https://www.wikidata.org/wiki/Q106016","display_name":"Genotype","level":3,"score":0.7089372873306274},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.4948815703392029},{"id":"https://openalex.org/C90132467","wikidata":"https://www.wikidata.org/wiki/Q171184","display_name":"Phylogenetics","level":3,"score":0.47573280334472656},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.3892871141433716},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.38732320070266724},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.3496784567832947},{"id":"https://openalex.org/C78458016","wikidata":"https://www.wikidata.org/wiki/Q840400","display_name":"Evolutionary biology","level":1,"score":0.3492470383644104},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.16818735003471375}],"mesh":[{"descriptor_ui":"D000069550","descriptor_name":"Machine Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000069550","descriptor_name":"Machine Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000069550","descriptor_name":"Machine Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D005838","descriptor_name":"Genotype","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D005838","descriptor_name":"Genotype","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D005838","descriptor_name":"Genotype","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D010802","descriptor_name":"Phylogeny","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D010802","descriptor_name":"Phylogeny","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D010802","descriptor_name":"Phylogeny","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D060005","descriptor_name":"Genotyping Techniques","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D060005","descriptor_name":"Genotyping Techniques","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D060005","descriptor_name":"Genotyping Techniques","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":3,"locations":[{"id":"doi:10.1093/bioinformatics/btz476","is_oa":false,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btz476","pdf_url":null,"source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},{"id":"pmid:31197316","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/31197316","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics (Oxford, England)","raw_type":null},{"id":"pmh:oai:arXiv.org:2010.09483","is_oa":true,"landing_page_url":"http://arxiv.org/abs/2010.09483","pdf_url":"https://arxiv.org/pdf/2010.09483","source":{"id":"https://openalex.org/S4306400194","display_name":"arXiv (Cornell University)","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I205783295","host_organization_name":"Cornell University","host_organization_lineage":["https://openalex.org/I205783295"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"text"}],"best_oa_location":{"id":"pmh:oai:arXiv.org:2010.09483","is_oa":true,"landing_page_url":"http://arxiv.org/abs/2010.09483","pdf_url":"https://arxiv.org/pdf/2010.09483","source":{"id":"https://openalex.org/S4306400194","display_name":"arXiv (Cornell University)","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I205783295","host_organization_name":"Cornell University","host_organization_lineage":["https://openalex.org/I205783295"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"text"},"sustainable_development_goals":[{"score":0.7599999904632568,"id":"https://metadata.un.org/sdg/15","display_name":"Life in Land"}],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":78,"referenced_works":["https://openalex.org/W1600112846","https://openalex.org/W1834060250","https://openalex.org/W1849663075","https://openalex.org/W1886329524","https://openalex.org/W1908810753","https://openalex.org/W1975612392","https://openalex.org/W1977601452","https://openalex.org/W1987161984","https://openalex.org/W1998867815","https://openalex.org/W2004263429","https://openalex.org/W2005717619","https://openalex.org/W2013483531","https://openalex.org/W2014408406","https://openalex.org/W2021210077","https://openalex.org/W2031435922","https://openalex.org/W2032420159","https://openalex.org/W2055298722","https://openalex.org/W2055969811","https://openalex.org/W2060891246","https://openalex.org/W2067376788","https://openalex.org/W2069016054","https://openalex.org/W2075371279","https://openalex.org/W2076007362","https://openalex.org/W2082884310","https://openalex.org/W2087234681","https://openalex.org/W2095552680","https://openalex.org/W2098126593","https://openalex.org/W2100152398","https://openalex.org/W2102223413","https://openalex.org/W2104549677","https://openalex.org/W2112491041","https://openalex.org/W2116585889","https://openalex.org/W2117665706","https://openalex.org/W2119444539","https://openalex.org/W2120962599","https://openalex.org/W2121552166","https://openalex.org/W2124020140","https://openalex.org/W2125056339","https://openalex.org/W2128686408","https://openalex.org/W2137485034","https://openalex.org/W2138556224","https://openalex.org/W2142644281","https://openalex.org/W2145593145","https://openalex.org/W2146290595","https://openalex.org/W2149799970","https://openalex.org/W2150290251","https://openalex.org/W2157093642","https://openalex.org/W2158489424","https://openalex.org/W2160194015","https://openalex.org/W2167727784","https://openalex.org/W2170044511","https://openalex.org/W2256193935","https://openalex.org/W2257762450","https://openalex.org/W2301484670","https://openalex.org/W2336949764","https://openalex.org/W2336973098","https://openalex.org/W2500261090","https://openalex.org/W2530475060","https://openalex.org/W2535923986","https://openalex.org/W2566365669","https://openalex.org/W2754950880","https://openalex.org/W2758550728","https://openalex.org/W2772407841","https://openalex.org/W2782678399","https://openalex.org/W2783813721","https://openalex.org/W2791073736","https://openalex.org/W2792563212","https://openalex.org/W2793807873","https://openalex.org/W2913066018","https://openalex.org/W2917542248","https://openalex.org/W2951621382","https://openalex.org/W2962725223","https://openalex.org/W2963517728","https://openalex.org/W2963776453","https://openalex.org/W4390807889","https://openalex.org/W6857373641","https://openalex.org/W7074033117","https://openalex.org/W7074137614"],"related_works":["https://openalex.org/W2174809885","https://openalex.org/W2057191541","https://openalex.org/W2949296710","https://openalex.org/W2883025420","https://openalex.org/W1992658754","https://openalex.org/W2111939425","https://openalex.org/W2065083790","https://openalex.org/W2604174992","https://openalex.org/W2375383082","https://openalex.org/W1974895455"],"abstract_inverted_index":{"Supplementary":[0],"data":[1],"are":[2],"available":[3],"at":[4],"Bioinformatics":[5],"online.":[6]},"counts_by_year":[{"year":2024,"cited_by_count":1},{"year":2022,"cited_by_count":3},{"year":2019,"cited_by_count":1}],"updated_date":"2026-03-27T05:58:40.876381","created_date":"2025-10-10T00:00:00"}
