{"id":"https://openalex.org/W2961295341","doi":"https://doi.org/10.1093/bioinformatics/btz439","title":"ISMB/ECCB 2019 Proceedings","display_name":"ISMB/ECCB 2019 Proceedings","publication_year":2019,"publication_date":"2019-06-07","ids":{"openalex":"https://openalex.org/W2961295341","doi":"https://doi.org/10.1093/bioinformatics/btz439","mag":"2961295341","pmid":"https://pubmed.ncbi.nlm.nih.gov/31510708"},"language":"en","primary_location":{"id":"doi:10.1093/bioinformatics/btz439","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btz439","pdf_url":"https://watermark.silverchair.com/btz439.pdf?token=AQECAHi208BE49Ooan9kkhW_Ercy7Dm3ZL_9Cf3qfKAc485ysgAAAr4wggK6BgkqhkiG9w0BBwagggKrMIICpwIBADCCAqAGCSqGSIb3DQEHATAeBglghkgBZQMEAS4wEQQM3XRgrfTGpvpXk-8HAgEQgIICcam_3xvgDpFXBWtNmC1SM5euVy-f69JrVTj82P6BUEPaLIxzZBtjtUI7Mrj-yt5ugvJi_hO8Ba5Md_sD0jRvDe98HqK-EoYx7yNw-SZ9NJasN0mKQhJ0raTWSxFkHx3zT53Hky1sGk1U072rr1GFhSM6vu0PZOUcuuGY6iOb4tCm-0783Lz0RIE-_HSL-0mhS6dW_6q8YVx3cNJWiKGWCo5y7u6kwg_99oQBCKJr5Dep1GOviJ-6h2NLq7f75kYBDdKH_X4KQHWN-MHbUSxZGwlVVW1ZNi8eoZdQC57ACNZLcICXdyYRrQ4fdBxkkuV2MRsJHmo3xiSj50Pj9YWZt277ud2FGbrYKBmID2Kwj7p2V--8NsQoFEtSHulPGl1D8V6EY6oFEtZC_xa2g7z8P8WrJkL9oa60LT6RE5xXIT035NkV12xYEzolYAQTVM4wc_dBQrhZnx_u13ne16ceILpNx0eLmcALQW12Z2qenMFev6twWdnGa2nOou1Hbn3iC8pnJrHcPOVkJz3TOfNYMpbOOOk6pp6kvl-NWU2vnSP_BOsrMQIPfUhysnVlXUO6o8Ym-UIgMX4AE7fIFKIwj-4VmTS6emMGHps73xmucCJYJjJAcd0AWJsc9345pSRQj9fY3Fbl-wjT5eDlKg2QHsKtmGhGndZ_rnxAHf4a2bOtC_7DSfQVQ62G6oLY3IzlDSik-01B3SD0gTylD_W1XaP8JD8QxdYgG7WTtjbtnsN2g0jfPnT-P2tThq0otQTWor-6FEqYHfiigy9vGhYDd-jFJw50kOxyGQ0azWLMISTbn1hoVtvVEVkiZ2p2ZeYiH2s","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"hybrid","oa_url":"https://watermark.silverchair.com/btz439.pdf?token=AQECAHi208BE49Ooan9kkhW_Ercy7Dm3ZL_9Cf3qfKAc485ysgAAAr4wggK6BgkqhkiG9w0BBwagggKrMIICpwIBADCCAqAGCSqGSIb3DQEHATAeBglghkgBZQMEAS4wEQQM3XRgrfTGpvpXk-8HAgEQgIICcam_3xvgDpFXBWtNmC1SM5euVy-f69JrVTj82P6BUEPaLIxzZBtjtUI7Mrj-yt5ugvJi_hO8Ba5Md_sD0jRvDe98HqK-EoYx7yNw-SZ9NJasN0mKQhJ0raTWSxFkHx3zT53Hky1sGk1U072rr1GFhSM6vu0PZOUcuuGY6iOb4tCm-0783Lz0RIE-_HSL-0mhS6dW_6q8YVx3cNJWiKGWCo5y7u6kwg_99oQBCKJr5Dep1GOviJ-6h2NLq7f75kYBDdKH_X4KQHWN-MHbUSxZGwlVVW1ZNi8eoZdQC57ACNZLcICXdyYRrQ4fdBxkkuV2MRsJHmo3xiSj50Pj9YWZt277ud2FGbrYKBmID2Kwj7p2V--8NsQoFEtSHulPGl1D8V6EY6oFEtZC_xa2g7z8P8WrJkL9oa60LT6RE5xXIT035NkV12xYEzolYAQTVM4wc_dBQrhZnx_u13ne16ceILpNx0eLmcALQW12Z2qenMFev6twWdnGa2nOou1Hbn3iC8pnJrHcPOVkJz3TOfNYMpbOOOk6pp6kvl-NWU2vnSP_BOsrMQIPfUhysnVlXUO6o8Ym-UIgMX4AE7fIFKIwj-4VmTS6emMGHps73xmucCJYJjJAcd0AWJsc9345pSRQj9fY3Fbl-wjT5eDlKg2QHsKtmGhGndZ_rnxAHf4a2bOtC_7DSfQVQ62G6oLY3IzlDSik-01B3SD0gTylD_W1XaP8JD8QxdYgG7WTtjbtnsN2g0jfPnT-P2tThq0otQTWor-6FEqYHfiigy9vGhYDd-jFJw50kOxyGQ0azWLMISTbn1hoVtvVEVkiZ2p2ZeYiH2s","any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5089912529","display_name":"Yana Bromberg","orcid":"https://orcid.org/0000-0002-8351-0844"},"institutions":[{"id":"https://openalex.org/I102322142","display_name":"Rutgers, The State University of New Jersey","ror":"https://ror.org/05vt9qd57","country_code":"US","type":"education","lineage":["https://openalex.org/I102322142"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Yana Bromberg","raw_affiliation_strings":["Department of Biochemistry and Microbiology, Rutgers University, New Brunswick, NJ, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Biochemistry and Microbiology, Rutgers University, New Brunswick, NJ, USA","institution_ids":["https://openalex.org/I102322142"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5041470344","display_name":"Nadia El-Mabrouk","orcid":"https://orcid.org/0000-0002-5385-1015"},"institutions":[{"id":"https://openalex.org/I70931966","display_name":"Universit\u00e9 de Montr\u00e9al","ror":"https://ror.org/0161xgx34","country_code":"CA","type":"education","lineage":["https://openalex.org/I70931966"]}],"countries":["CA"],"is_corresponding":false,"raw_author_name":"Nadia El-Mabrouk","raw_affiliation_strings":["Department of Computer Science (DIRO), Universit\u00e9 de Montr\u00e9al, QC, Canada"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Computer Science (DIRO), Universit\u00e9 de Montr\u00e9al, QC, Canada","institution_ids":["https://openalex.org/I70931966"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5051324698","display_name":"Predrag Radivojac","orcid":"https://orcid.org/0000-0002-6769-0793"},"institutions":[{"id":"https://openalex.org/I12912129","display_name":"Northeastern University","ror":"https://ror.org/04t5xt781","country_code":"US","type":"education","lineage":["https://openalex.org/I12912129"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Predrag Radivojac","raw_affiliation_strings":["Khoury College of Computer Sciences, Northeastern University, Boston, MA, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Khoury College of Computer Sciences, Northeastern University, Boston, MA, USA","institution_ids":["https://openalex.org/I12912129"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":3,"corresponding_author_ids":["https://openalex.org/A5051324698","https://openalex.org/A5089912529"],"corresponding_institution_ids":["https://openalex.org/I102322142","https://openalex.org/I12912129"],"apc_list":{"value":3618,"currency":"USD","value_usd":3618},"apc_paid":{"value":3618,"currency":"USD","value_usd":3618},"fwci":0.0829,"has_fulltext":false,"cited_by_count":3,"citation_normalized_percentile":{"value":0.457763,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":97},"biblio":{"volume":"35","issue":"14","first_page":"i1","last_page":"i2"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11289","display_name":"Single-cell and spatial transcriptomics","score":0.007799999788403511,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11289","display_name":"Single-cell and spatial transcriptomics","score":0.007799999788403511,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12859","display_name":"Cell Image Analysis Techniques","score":0.007199999876320362,"subfield":{"id":"https://openalex.org/subfields/1304","display_name":"Biophysics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T13937","display_name":"Genetics, Bioinformatics, and Biomedical Research","score":0.006300000008195639,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6208631992340088}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6208631992340088}],"mesh":[],"locations_count":4,"locations":[{"id":"doi:10.1093/bioinformatics/btz439","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btz439","pdf_url":"https://watermark.silverchair.com/btz439.pdf?token=AQECAHi208BE49Ooan9kkhW_Ercy7Dm3ZL_9Cf3qfKAc485ysgAAAr4wggK6BgkqhkiG9w0BBwagggKrMIICpwIBADCCAqAGCSqGSIb3DQEHATAeBglghkgBZQMEAS4wEQQM3XRgrfTGpvpXk-8HAgEQgIICcam_3xvgDpFXBWtNmC1SM5euVy-f69JrVTj82P6BUEPaLIxzZBtjtUI7Mrj-yt5ugvJi_hO8Ba5Md_sD0jRvDe98HqK-EoYx7yNw-SZ9NJasN0mKQhJ0raTWSxFkHx3zT53Hky1sGk1U072rr1GFhSM6vu0PZOUcuuGY6iOb4tCm-0783Lz0RIE-_HSL-0mhS6dW_6q8YVx3cNJWiKGWCo5y7u6kwg_99oQBCKJr5Dep1GOviJ-6h2NLq7f75kYBDdKH_X4KQHWN-MHbUSxZGwlVVW1ZNi8eoZdQC57ACNZLcICXdyYRrQ4fdBxkkuV2MRsJHmo3xiSj50Pj9YWZt277ud2FGbrYKBmID2Kwj7p2V--8NsQoFEtSHulPGl1D8V6EY6oFEtZC_xa2g7z8P8WrJkL9oa60LT6RE5xXIT035NkV12xYEzolYAQTVM4wc_dBQrhZnx_u13ne16ceILpNx0eLmcALQW12Z2qenMFev6twWdnGa2nOou1Hbn3iC8pnJrHcPOVkJz3TOfNYMpbOOOk6pp6kvl-NWU2vnSP_BOsrMQIPfUhysnVlXUO6o8Ym-UIgMX4AE7fIFKIwj-4VmTS6emMGHps73xmucCJYJjJAcd0AWJsc9345pSRQj9fY3Fbl-wjT5eDlKg2QHsKtmGhGndZ_rnxAHf4a2bOtC_7DSfQVQ62G6oLY3IzlDSik-01B3SD0gTylD_W1XaP8JD8QxdYgG7WTtjbtnsN2g0jfPnT-P2tThq0otQTWor-6FEqYHfiigy9vGhYDd-jFJw50kOxyGQ0azWLMISTbn1hoVtvVEVkiZ2p2ZeYiH2s","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},{"id":"pmid:31510708","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/31510708","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics (Oxford, England)","raw_type":null},{"id":"pmh:oai:alma.01RUT_INST:11664986540004646","is_oa":false,"landing_page_url":"https://scholarship.libraries.rutgers.edu/esploro/outputs/journalArticle/ISMBECCB-2019-Proceedings/991031665765904646","pdf_url":null,"source":{"id":"https://openalex.org/S4210197018","display_name":"View","issn_l":"2688-268X","issn":["2688-268X","2688-3988"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320595","host_organization_name":"Wiley","host_organization_lineage":["https://openalex.org/P4310320595"],"host_organization_lineage_names":["Wiley"],"type":"journal"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"text"},{"id":"pmh:oai:europepmc.org:5588664","is_oa":false,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/6612803","pdf_url":null,"source":{"id":"https://openalex.org/S4306400806","display_name":"Europe PMC (PubMed Central)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1303153112","host_organization_name":"European Bioinformatics Institute","host_organization_lineage":["https://openalex.org/I1303153112"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1093/bioinformatics/btz439","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btz439","pdf_url":"https://watermark.silverchair.com/btz439.pdf?token=AQECAHi208BE49Ooan9kkhW_Ercy7Dm3ZL_9Cf3qfKAc485ysgAAAr4wggK6BgkqhkiG9w0BBwagggKrMIICpwIBADCCAqAGCSqGSIb3DQEHATAeBglghkgBZQMEAS4wEQQM3XRgrfTGpvpXk-8HAgEQgIICcam_3xvgDpFXBWtNmC1SM5euVy-f69JrVTj82P6BUEPaLIxzZBtjtUI7Mrj-yt5ugvJi_hO8Ba5Md_sD0jRvDe98HqK-EoYx7yNw-SZ9NJasN0mKQhJ0raTWSxFkHx3zT53Hky1sGk1U072rr1GFhSM6vu0PZOUcuuGY6iOb4tCm-0783Lz0RIE-_HSL-0mhS6dW_6q8YVx3cNJWiKGWCo5y7u6kwg_99oQBCKJr5Dep1GOviJ-6h2NLq7f75kYBDdKH_X4KQHWN-MHbUSxZGwlVVW1ZNi8eoZdQC57ACNZLcICXdyYRrQ4fdBxkkuV2MRsJHmo3xiSj50Pj9YWZt277ud2FGbrYKBmID2Kwj7p2V--8NsQoFEtSHulPGl1D8V6EY6oFEtZC_xa2g7z8P8WrJkL9oa60LT6RE5xXIT035NkV12xYEzolYAQTVM4wc_dBQrhZnx_u13ne16ceILpNx0eLmcALQW12Z2qenMFev6twWdnGa2nOou1Hbn3iC8pnJrHcPOVkJz3TOfNYMpbOOOk6pp6kvl-NWU2vnSP_BOsrMQIPfUhysnVlXUO6o8Ym-UIgMX4AE7fIFKIwj-4VmTS6emMGHps73xmucCJYJjJAcd0AWJsc9345pSRQj9fY3Fbl-wjT5eDlKg2QHsKtmGhGndZ_rnxAHf4a2bOtC_7DSfQVQ62G6oLY3IzlDSik-01B3SD0gTylD_W1XaP8JD8QxdYgG7WTtjbtnsN2g0jfPnT-P2tThq0otQTWor-6FEqYHfiigy9vGhYDd-jFJw50kOxyGQ0azWLMISTbn1hoVtvVEVkiZ2p2ZeYiH2s","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":0,"referenced_works":[],"related_works":["https://openalex.org/W2748952813","https://openalex.org/W2390279801","https://openalex.org/W2358668433","https://openalex.org/W2376932109","https://openalex.org/W2001405890","https://openalex.org/W2382290278","https://openalex.org/W2478288626","https://openalex.org/W2350741829","https://openalex.org/W2530322880","https://openalex.org/W1596801655"],"abstract_inverted_index":null,"counts_by_year":[{"year":2026,"cited_by_count":1},{"year":2020,"cited_by_count":1},{"year":2018,"cited_by_count":1}],"updated_date":"2026-05-19T21:40:30.786675","created_date":"2025-10-10T00:00:00"}
