{"id":"https://openalex.org/W2925675330","doi":"https://doi.org/10.1093/bioinformatics/btz230","title":"Genome-wide identification of the essential protein-coding genes and long non-coding RNAs for human pan-cancer","display_name":"Genome-wide identification of the essential protein-coding genes and long non-coding RNAs for human pan-cancer","publication_year":2019,"publication_date":"2019-03-26","ids":{"openalex":"https://openalex.org/W2925675330","doi":"https://doi.org/10.1093/bioinformatics/btz230","mag":"2925675330","pmid":"https://pubmed.ncbi.nlm.nih.gov/30923830"},"language":"en","primary_location":{"id":"doi:10.1093/bioinformatics/btz230","is_oa":false,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btz230","pdf_url":null,"source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5100326584","display_name":"Yuwei Zhang","orcid":"https://orcid.org/0000-0002-8395-3020"},"institutions":[{"id":"https://openalex.org/I109935558","display_name":"Ningbo University","ror":"https://ror.org/03et85d35","country_code":"CN","type":"education","lineage":["https://openalex.org/I109935558"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Yuwei Zhang","raw_affiliation_strings":["Department of Preventative Medicine, Zhejiang Provincial Key Laboratory of Pathological and Physiological Technology, Medicine School of Ningbo University , Ningbo, Zhejiang, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Preventative Medicine, Zhejiang Provincial Key Laboratory of Pathological and Physiological Technology, Medicine School of Ningbo University , Ningbo, Zhejiang, China","institution_ids":["https://openalex.org/I109935558"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100733947","display_name":"Tao Yang","orcid":"https://orcid.org/0000-0002-3691-3819"},"institutions":[{"id":"https://openalex.org/I109935558","display_name":"Ningbo University","ror":"https://ror.org/03et85d35","country_code":"CN","type":"education","lineage":["https://openalex.org/I109935558"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Yang Tao","raw_affiliation_strings":["Department of Preventative Medicine, Zhejiang Provincial Key Laboratory of Pathological and Physiological Technology, Medicine School of Ningbo University , Ningbo, Zhejiang, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Preventative Medicine, Zhejiang Provincial Key Laboratory of Pathological and Physiological Technology, Medicine School of Ningbo University , Ningbo, Zhejiang, China","institution_ids":["https://openalex.org/I109935558"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5040168179","display_name":"Huihui Ji","orcid":null},"institutions":[{"id":"https://openalex.org/I109935558","display_name":"Ningbo University","ror":"https://ror.org/03et85d35","country_code":"CN","type":"education","lineage":["https://openalex.org/I109935558"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Huihui Ji","raw_affiliation_strings":["Zhejiang Provincial Key Laboratory of Pathophysiology, School of Medicine, Ningbo University , Zhejiang, Ningbo, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Zhejiang Provincial Key Laboratory of Pathophysiology, School of Medicine, Ningbo University , Zhejiang, Ningbo, China","institution_ids":["https://openalex.org/I109935558"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100318133","display_name":"Wei Li","orcid":"https://orcid.org/0000-0002-2163-7903"},"institutions":[{"id":"https://openalex.org/I1336742384","display_name":"Children's National","ror":"https://ror.org/03wa2q724","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I1336742384"]},{"id":"https://openalex.org/I193531525","display_name":"George Washington University","ror":"https://ror.org/00y4zzh67","country_code":"US","type":"education","lineage":["https://openalex.org/I193531525"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Wei Li","raw_affiliation_strings":["Center for Genetic Medicine Research, Children\u2019s National Medical Center, Department of Genomics and Precision Medicine, George Washington University , Washington, DC, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Center for Genetic Medicine Research, Children\u2019s National Medical Center, Department of Genomics and Precision Medicine, George Washington University , Washington, DC, USA","institution_ids":["https://openalex.org/I1336742384","https://openalex.org/I193531525"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5111166735","display_name":"Xingli Guo","orcid":"https://orcid.org/0000-0002-1199-7120"},"institutions":[{"id":"https://openalex.org/I149594827","display_name":"Xidian University","ror":"https://ror.org/05s92vm98","country_code":"CN","type":"education","lineage":["https://openalex.org/I149594827"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Xingli Guo","raw_affiliation_strings":["School of Computer Science and Technology, Xidian University, Xi\u2019an, Shaanxi Province 710071, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Computer Science and Technology, Xidian University, Xi\u2019an, Shaanxi Province 710071, China","institution_ids":["https://openalex.org/I149594827"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5011124521","display_name":"Derry Minyao Ng","orcid":"https://orcid.org/0000-0002-9973-3719"},"institutions":[{"id":"https://openalex.org/I109935558","display_name":"Ningbo University","ror":"https://ror.org/03et85d35","country_code":"CN","type":"education","lineage":["https://openalex.org/I109935558"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Derry Minyao Ng","raw_affiliation_strings":["Department of Preventative Medicine, Zhejiang Provincial Key Laboratory of Pathological and Physiological Technology, Medicine School of Ningbo University , Ningbo, Zhejiang, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Preventative Medicine, Zhejiang Provincial Key Laboratory of Pathological and Physiological Technology, Medicine School of Ningbo University , Ningbo, Zhejiang, China","institution_ids":["https://openalex.org/I109935558"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5110554689","display_name":"Maria Haleem","orcid":null},"institutions":[{"id":"https://openalex.org/I109935558","display_name":"Ningbo University","ror":"https://ror.org/03et85d35","country_code":"CN","type":"education","lineage":["https://openalex.org/I109935558"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Maria Haleem","raw_affiliation_strings":["Department of Preventative Medicine, Zhejiang Provincial Key Laboratory of Pathological and Physiological Technology, Medicine School of Ningbo University , Ningbo, Zhejiang, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Preventative Medicine, Zhejiang Provincial Key Laboratory of Pathological and Physiological Technology, Medicine School of Ningbo University , Ningbo, Zhejiang, China","institution_ids":["https://openalex.org/I109935558"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100646461","display_name":"Xi Yang","orcid":"https://orcid.org/0000-0001-8630-5945"},"institutions":[{"id":"https://openalex.org/I109935558","display_name":"Ningbo University","ror":"https://ror.org/03et85d35","country_code":"CN","type":"education","lineage":["https://openalex.org/I109935558"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Yang Xi","raw_affiliation_strings":["Zhejiang Provincial Key Laboratory of Pathophysiology, School of Medicine, Ningbo University , Zhejiang, Ningbo, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Zhejiang Provincial Key Laboratory of Pathophysiology, School of Medicine, Ningbo University , Zhejiang, Ningbo, China","institution_ids":["https://openalex.org/I109935558"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5101487154","display_name":"Changzheng Dong","orcid":"https://orcid.org/0000-0002-5271-0405"},"institutions":[{"id":"https://openalex.org/I109935558","display_name":"Ningbo University","ror":"https://ror.org/03et85d35","country_code":"CN","type":"education","lineage":["https://openalex.org/I109935558"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Changzheng Dong","raw_affiliation_strings":["Department of Preventative Medicine, Zhejiang Provincial Key Laboratory of Pathological and Physiological Technology, Medicine School of Ningbo University , Ningbo, Zhejiang, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Preventative Medicine, Zhejiang Provincial Key Laboratory of Pathological and Physiological Technology, Medicine School of Ningbo University , Ningbo, Zhejiang, China","institution_ids":["https://openalex.org/I109935558"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5030976817","display_name":"Jinshun Zhao","orcid":"https://orcid.org/0000-0001-6012-1611"},"institutions":[{"id":"https://openalex.org/I109935558","display_name":"Ningbo University","ror":"https://ror.org/03et85d35","country_code":"CN","type":"education","lineage":["https://openalex.org/I109935558"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Jinshun Zhao","raw_affiliation_strings":["Department of Preventative Medicine, Zhejiang Provincial Key Laboratory of Pathological and Physiological Technology, Medicine School of Ningbo University , Ningbo, Zhejiang, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Preventative Medicine, Zhejiang Provincial Key Laboratory of Pathological and Physiological Technology, Medicine School of Ningbo University , Ningbo, Zhejiang, China","institution_ids":["https://openalex.org/I109935558"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5101530202","display_name":"Lina Zhang","orcid":"https://orcid.org/0000-0002-8214-8505"},"institutions":[{"id":"https://openalex.org/I109935558","display_name":"Ningbo University","ror":"https://ror.org/03et85d35","country_code":"CN","type":"education","lineage":["https://openalex.org/I109935558"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Lina Zhang","raw_affiliation_strings":["Department of Preventative Medicine, Zhejiang Provincial Key Laboratory of Pathological and Physiological Technology, Medicine School of Ningbo University , Ningbo, Zhejiang, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Preventative Medicine, Zhejiang Provincial Key Laboratory of Pathological and Physiological Technology, Medicine School of Ningbo University , Ningbo, Zhejiang, China","institution_ids":["https://openalex.org/I109935558"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100330121","display_name":"Xiaohong Zhang","orcid":"https://orcid.org/0000-0003-2320-0884"},"institutions":[{"id":"https://openalex.org/I109935558","display_name":"Ningbo University","ror":"https://ror.org/03et85d35","country_code":"CN","type":"education","lineage":["https://openalex.org/I109935558"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Xiaohong Zhang","raw_affiliation_strings":["Department of Preventative Medicine, Zhejiang Provincial Key Laboratory of Pathological and Physiological Technology, Medicine School of Ningbo University , Ningbo, Zhejiang, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Preventative Medicine, Zhejiang Provincial Key Laboratory of Pathological and Physiological Technology, Medicine School of Ningbo University , Ningbo, Zhejiang, China","institution_ids":["https://openalex.org/I109935558"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5102921591","display_name":"Yangyang Xie","orcid":"https://orcid.org/0000-0002-5522-5966"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Yangyang Xie","raw_affiliation_strings":["Anorectal Surgery, Ningbo Second Hospital , Ningbo, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Anorectal Surgery, Ningbo Second Hospital , Ningbo, China","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5103246595","display_name":"Xiaoyu Dai","orcid":"https://orcid.org/0000-0003-2653-0299"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Xiaoyu Dai","raw_affiliation_strings":["Anorectal Surgery, Ningbo Second Hospital , Ningbo, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Anorectal Surgery, Ningbo Second Hospital , Ningbo, China","institution_ids":[]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5102004889","display_name":"Qi Liao","orcid":"https://orcid.org/0000-0001-6796-104X"},"institutions":[{"id":"https://openalex.org/I109935558","display_name":"Ningbo University","ror":"https://ror.org/03et85d35","country_code":"CN","type":"education","lineage":["https://openalex.org/I109935558"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Qi Liao","raw_affiliation_strings":["Department of Preventative Medicine, Zhejiang Provincial Key Laboratory of Pathological and Physiological Technology, Medicine School of Ningbo University , Ningbo, Zhejiang, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Preventative Medicine, Zhejiang Provincial Key Laboratory of Pathological and Physiological Technology, Medicine School of Ningbo University , Ningbo, Zhejiang, China","institution_ids":["https://openalex.org/I109935558"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":4,"corresponding_author_ids":["https://openalex.org/A5102004889"],"corresponding_institution_ids":["https://openalex.org/I109935558"],"apc_list":{"value":3618,"currency":"USD","value_usd":3618},"apc_paid":null,"fwci":0.5334,"has_fulltext":false,"cited_by_count":11,"citation_normalized_percentile":{"value":0.58714503,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":98},"biblio":{"volume":"35","issue":"21","first_page":"4344","last_page":"4349"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10515","display_name":"Cancer-related molecular mechanisms research","score":0.5450999736785889,"subfield":{"id":"https://openalex.org/subfields/1306","display_name":"Cancer Research"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10515","display_name":"Cancer-related molecular mechanisms research","score":0.5450999736785889,"subfield":{"id":"https://openalex.org/subfields/1306","display_name":"Cancer Research"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10878","display_name":"CRISPR and Genetic Engineering","score":0.14110000431537628,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12610","display_name":"RNA regulation and disease","score":0.06599999964237213,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.7186225652694702},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.6706950664520264},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.627932071685791},{"id":"https://openalex.org/keywords/genome","display_name":"Genome","score":0.47928494215011597},{"id":"https://openalex.org/keywords/crispr","display_name":"CRISPR","score":0.44221749901771545},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.40605005621910095}],"concepts":[{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.7186225652694702},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.6706950664520264},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.627932071685791},{"id":"https://openalex.org/C141231307","wikidata":"https://www.wikidata.org/wiki/Q7020","display_name":"Genome","level":3,"score":0.47928494215011597},{"id":"https://openalex.org/C98108389","wikidata":"https://www.wikidata.org/wiki/Q412563","display_name":"CRISPR","level":3,"score":0.44221749901771545},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.40605005621910095}],"mesh":[{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D009369","descriptor_name":"Neoplasms","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D009369","descriptor_name":"Neoplasms","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D009369","descriptor_name":"Neoplasms","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D009857","descriptor_name":"Oncogenes","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D009857","descriptor_name":"Oncogenes","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D009857","descriptor_name":"Oncogenes","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D055106","descriptor_name":"Genome-Wide Association Study","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D055106","descriptor_name":"Genome-Wide Association Study","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D055106","descriptor_name":"Genome-Wide Association Study","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D062085","descriptor_name":"RNA, Long Noncoding","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D062085","descriptor_name":"RNA, Long Noncoding","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D062085","descriptor_name":"RNA, Long Noncoding","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":2,"locations":[{"id":"doi:10.1093/bioinformatics/btz230","is_oa":false,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btz230","pdf_url":null,"source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},{"id":"pmid:30923830","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/30923830","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics (Oxford, England)","raw_type":null}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[],"funders":[{"id":"https://openalex.org/F4320337015","display_name":"K. C. Wong Magna Fund in Ningbo University","ror":null}],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":29,"referenced_works":["https://openalex.org/W2064815984","https://openalex.org/W2079488258","https://openalex.org/W2079561996","https://openalex.org/W2099505694","https://openalex.org/W2100122648","https://openalex.org/W2113868616","https://openalex.org/W2136850043","https://openalex.org/W2138164217","https://openalex.org/W2146511318","https://openalex.org/W2180291937","https://openalex.org/W2346972266","https://openalex.org/W2524784061","https://openalex.org/W2537623931","https://openalex.org/W2544093984","https://openalex.org/W2561535772","https://openalex.org/W2578197026","https://openalex.org/W2583112833","https://openalex.org/W2727479110","https://openalex.org/W2766026397","https://openalex.org/W2773372810","https://openalex.org/W2773619385","https://openalex.org/W2800556831","https://openalex.org/W2800620450","https://openalex.org/W2883814466","https://openalex.org/W2887976236","https://openalex.org/W2953212411","https://openalex.org/W6727848351","https://openalex.org/W6732658201","https://openalex.org/W6754688907"],"related_works":["https://openalex.org/W4293199045","https://openalex.org/W2405656580","https://openalex.org/W2642604616","https://openalex.org/W3162049976","https://openalex.org/W4381712632","https://openalex.org/W4213036952","https://openalex.org/W2987420353","https://openalex.org/W4377030018","https://openalex.org/W1491897707","https://openalex.org/W2034625591"],"abstract_inverted_index":{"MOTIVATION:":[0],"Genome-scale":[1],"CRISPR/Cas9":[2],"system":[3],"has":[4],"been":[5],"a":[6,39,147,170],"democratized":[7],"gene":[8,16,29],"editing":[9],"technique":[10],"and":[11,22,31,65,75,95,107,138,153,155,166,176,191,198,203,211,232],"widely":[12],"used":[13,53,82],"to":[14,27,41,54,83,127,158],"investigate":[15],"functions":[17],"in":[18,189,226,235],"some":[19],"biological":[20,209],"processes":[21,210],"diseases":[23],"especially":[24],"cancers.":[25],"Aiming":[26],"characterize":[28],"aberrations":[30],"assess":[32],"their":[33,186],"effects":[34],"on":[35,88,104,169],"cancer,":[36],"we":[37,145,183],"designed":[38],"pipeline":[40],"identify":[42,55,128],"the":[43,56,92,227],"essential":[44,57,86,161,181,194,223],"genes":[45,58,87,100,136,162,195,224],"for":[46],"pan-cancer.":[47],"METHODS:":[48],"CRISPR":[49],"screening":[50,119],"data":[51,64,244],"were":[52,60,81,101],"that":[59,193],"collected":[61,113],"from":[62,116],"published":[63],"integrated":[66],"by":[67],"Robust":[68],"Rank":[69],"Aggregation":[70],"algorithm.":[71],"Then,":[72,144],"hypergeometrics":[73,174],"test":[74,175],"random":[76],"walks":[77],"with":[78,150,206],"restart":[79],"(RWR)":[80],"predict":[84,159],"additional":[85,160],"broader":[89,171],"scale.":[90],"Finally,":[91],"expression":[93,201],"status":[94],"potential":[96,187],"roles":[97,188],"of":[98,125,133,222,229],"these":[99],"explored":[102],"based":[103],"TCGA":[105],"portal":[106],"regulatory":[108,215],"network":[109,149,216],"analysis.":[110],"RESULTS:":[111],"We":[112],"926":[114],"samples":[115],"10":[117],"CRISPR-based":[118],"studies":[120],"involving":[121],"33":[122],"different":[123],"types":[124],"cancer":[126,190],"cancer-essential":[129],"genes,":[130,182],"which":[131],"consists":[132],"799":[134],"protein-coding":[135],"(PCGs)":[137],"97":[139],"long":[140],"non-coding":[141],"RNAs":[142],"(lncRNAs).":[143],"constructed":[146],"'bi-colored'":[148],"both":[151],"PCGs":[152,165],"lncRNAs":[154,168],"applied":[156],"it":[157],"including":[163],"495":[164],"280":[167],"scale":[172],"using":[173],"RWR.":[177],"After":[178],"obtaining":[179],"all":[180],"further":[184],"investigated":[185],"found":[192],"have":[196],"higher":[197],"more":[199],"stable":[200],"levels,":[202],"are":[204,245],"associated":[205],"multiple":[207],"cancer-associated":[208],"survival":[212],"time.":[213],"The":[214],"analysis":[217],"detected":[218],"two":[219],"intriguing":[220],"modules":[221],"participating":[225],"regulation":[228],"cell":[230],"cycle":[231],"ribosome":[233],"biogenesis":[234],"cancer.":[236],"AVAILABILITY":[237],"AND":[238],"IMPLEMENTATION:":[239],".":[240],"SUPPLEMENTARY":[241],"INFORMATION:":[242],"Supplementary":[243],"available":[246],"at":[247],"Bioinformatics":[248],"online.":[249]},"counts_by_year":[{"year":2025,"cited_by_count":1},{"year":2024,"cited_by_count":3},{"year":2021,"cited_by_count":1},{"year":2020,"cited_by_count":6}],"updated_date":"2026-05-21T06:26:12.895304","created_date":"2025-10-10T00:00:00"}
