{"id":"https://openalex.org/W2951421219","doi":"https://doi.org/10.1093/bioinformatics/btz150","title":"RECAP reveals the true statistical significance of ChIP-seq peak calls","display_name":"RECAP reveals the true statistical significance of ChIP-seq peak calls","publication_year":2019,"publication_date":"2019-02-27","ids":{"openalex":"https://openalex.org/W2951421219","doi":"https://doi.org/10.1093/bioinformatics/btz150","mag":"2951421219","pmid":"https://pubmed.ncbi.nlm.nih.gov/30824903"},"language":"en","primary_location":{"id":"doi:10.1093/bioinformatics/btz150","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btz150","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/35/19/3592/30061691/btz150.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"hybrid","oa_url":"https://academic.oup.com/bioinformatics/article-pdf/35/19/3592/30061691/btz150.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5000770856","display_name":"Justin G. Chitpin","orcid":"https://orcid.org/0000-0002-8692-9616"},"institutions":[{"id":"https://openalex.org/I153718931","display_name":"University of Ottawa","ror":"https://ror.org/03c4mmv16","country_code":"CA","type":"education","lineage":["https://openalex.org/I153718931"]},{"id":"https://openalex.org/I2800722420","display_name":"Ottawa Hospital","ror":"https://ror.org/03c62dg59","country_code":"CA","type":"healthcare","lineage":["https://openalex.org/I2800722420"]},{"id":"https://openalex.org/I4388482656","display_name":"Ottawa Hospital Research Institute","ror":"https://ror.org/05jtef216","country_code":null,"type":"healthcare","lineage":["https://openalex.org/I153718931","https://openalex.org/I2800722420","https://openalex.org/I4388482656"]}],"countries":["CA"],"is_corresponding":false,"raw_author_name":"Justin G Chitpin","raw_affiliation_strings":["Regenerative Medicine Program, Ottawa Hospital Research Institute , Ottawa, ON K1H8L6, Canada","Translational and Molecular Medicine Program, University of Ottawa , Ottawa, ON K1H8M5, Canada"],"affiliations":[{"raw_affiliation_string":"Regenerative Medicine Program, Ottawa Hospital Research Institute , Ottawa, ON K1H8L6, Canada","institution_ids":["https://openalex.org/I2800722420","https://openalex.org/I4388482656"]},{"raw_affiliation_string":"Translational and Molecular Medicine Program, University of Ottawa , Ottawa, ON K1H8M5, Canada","institution_ids":["https://openalex.org/I153718931"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5011549216","display_name":"Aseel Awdeh","orcid":"https://orcid.org/0000-0003-0578-090X"},"institutions":[{"id":"https://openalex.org/I153718931","display_name":"University of Ottawa","ror":"https://ror.org/03c4mmv16","country_code":"CA","type":"education","lineage":["https://openalex.org/I153718931"]},{"id":"https://openalex.org/I2800722420","display_name":"Ottawa Hospital","ror":"https://ror.org/03c62dg59","country_code":"CA","type":"healthcare","lineage":["https://openalex.org/I2800722420"]},{"id":"https://openalex.org/I4388482656","display_name":"Ottawa Hospital Research Institute","ror":"https://ror.org/05jtef216","country_code":null,"type":"healthcare","lineage":["https://openalex.org/I153718931","https://openalex.org/I2800722420","https://openalex.org/I4388482656"]}],"countries":["CA"],"is_corresponding":false,"raw_author_name":"Aseel Awdeh","raw_affiliation_strings":["Regenerative Medicine Program, Ottawa Hospital Research Institute , Ottawa, ON K1H8L6, Canada","School of Electrical Engineering and Computer Science, University of Ottawa , Ottawa, ON K1N6N5, Canada"],"affiliations":[{"raw_affiliation_string":"Regenerative Medicine Program, Ottawa Hospital Research Institute , Ottawa, ON K1H8L6, Canada","institution_ids":["https://openalex.org/I2800722420","https://openalex.org/I4388482656"]},{"raw_affiliation_string":"School of Electrical Engineering and Computer Science, University of Ottawa , Ottawa, ON K1N6N5, Canada","institution_ids":["https://openalex.org/I153718931"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5009680404","display_name":"Theodore J. Perkins","orcid":"https://orcid.org/0000-0002-6622-8003"},"institutions":[{"id":"https://openalex.org/I153718931","display_name":"University of Ottawa","ror":"https://ror.org/03c4mmv16","country_code":"CA","type":"education","lineage":["https://openalex.org/I153718931"]},{"id":"https://openalex.org/I2800722420","display_name":"Ottawa Hospital","ror":"https://ror.org/03c62dg59","country_code":"CA","type":"healthcare","lineage":["https://openalex.org/I2800722420"]},{"id":"https://openalex.org/I4388482656","display_name":"Ottawa Hospital Research Institute","ror":"https://ror.org/05jtef216","country_code":null,"type":"healthcare","lineage":["https://openalex.org/I153718931","https://openalex.org/I2800722420","https://openalex.org/I4388482656"]}],"countries":["CA"],"is_corresponding":true,"raw_author_name":"Theodore J Perkins","raw_affiliation_strings":["Department of Biochemistry, Microbiology and Immunology, University of Ottawa , Ottawa, ON K1H8M5, Canada","Regenerative Medicine Program, Ottawa Hospital Research Institute , Ottawa, ON K1H8L6, Canada","School of Electrical Engineering and Computer Science, University of Ottawa , Ottawa, ON K1N6N5, Canada"],"affiliations":[{"raw_affiliation_string":"Department of Biochemistry, Microbiology and Immunology, University of Ottawa , Ottawa, ON K1H8M5, Canada","institution_ids":["https://openalex.org/I153718931"]},{"raw_affiliation_string":"Regenerative Medicine Program, Ottawa Hospital Research Institute , Ottawa, ON K1H8L6, Canada","institution_ids":["https://openalex.org/I2800722420","https://openalex.org/I4388482656"]},{"raw_affiliation_string":"School of Electrical Engineering and Computer Science, University of Ottawa , Ottawa, ON K1N6N5, Canada","institution_ids":["https://openalex.org/I153718931"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":3,"corresponding_author_ids":["https://openalex.org/A5009680404"],"corresponding_institution_ids":["https://openalex.org/I153718931","https://openalex.org/I2800722420","https://openalex.org/I4388482656"],"apc_list":{"value":3618,"currency":"USD","value_usd":3618},"apc_paid":{"value":3618,"currency":"USD","value_usd":3618},"fwci":0.5153,"has_fulltext":false,"cited_by_count":8,"citation_normalized_percentile":{"value":0.64538255,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":97},"biblio":{"volume":"35","issue":"19","first_page":"3592","last_page":"3598"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10222","display_name":"Genomics and Chromatin Dynamics","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10222","display_name":"Genomics and Chromatin Dynamics","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10604","display_name":"RNA Research and Splicing","score":0.9977999925613403,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9961000084877014,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/false-discovery-rate","display_name":"False discovery rate","score":0.7771912217140198},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.5787246227264404},{"id":"https://openalex.org/keywords/resampling","display_name":"Resampling","score":0.553961992263794},{"id":"https://openalex.org/keywords/statistical-hypothesis-testing","display_name":"Statistical hypothesis testing","score":0.5356862545013428},{"id":"https://openalex.org/keywords/chip","display_name":"Chip","score":0.5000627040863037},{"id":"https://openalex.org/keywords/statistical-model","display_name":"Statistical model","score":0.43661007285118103},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.42604732513427734},{"id":"https://openalex.org/keywords/statistics","display_name":"Statistics","score":0.3828926682472229},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.25681379437446594},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.2511053681373596},{"id":"https://openalex.org/keywords/algorithm","display_name":"Algorithm","score":0.2480560839176178},{"id":"https://openalex.org/keywords/machine-learning","display_name":"Machine learning","score":0.20545822381973267},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.17553016543388367}],"concepts":[{"id":"https://openalex.org/C193244246","wikidata":"https://www.wikidata.org/wiki/Q5432696","display_name":"False discovery rate","level":3,"score":0.7771912217140198},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.5787246227264404},{"id":"https://openalex.org/C150921843","wikidata":"https://www.wikidata.org/wiki/Q1170431","display_name":"Resampling","level":2,"score":0.553961992263794},{"id":"https://openalex.org/C87007009","wikidata":"https://www.wikidata.org/wiki/Q210832","display_name":"Statistical hypothesis testing","level":2,"score":0.5356862545013428},{"id":"https://openalex.org/C165005293","wikidata":"https://www.wikidata.org/wiki/Q1074500","display_name":"Chip","level":2,"score":0.5000627040863037},{"id":"https://openalex.org/C114289077","wikidata":"https://www.wikidata.org/wiki/Q3284399","display_name":"Statistical model","level":2,"score":0.43661007285118103},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.42604732513427734},{"id":"https://openalex.org/C105795698","wikidata":"https://www.wikidata.org/wiki/Q12483","display_name":"Statistics","level":1,"score":0.3828926682472229},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.25681379437446594},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.2511053681373596},{"id":"https://openalex.org/C11413529","wikidata":"https://www.wikidata.org/wiki/Q8366","display_name":"Algorithm","level":1,"score":0.2480560839176178},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.20545822381973267},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.17553016543388367},{"id":"https://openalex.org/C76155785","wikidata":"https://www.wikidata.org/wiki/Q418","display_name":"Telecommunications","level":1,"score":0.0},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.0}],"mesh":[{"descriptor_ui":"D000081204","descriptor_name":"Chromatin Immunoprecipitation Sequencing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000081204","descriptor_name":"Chromatin Immunoprecipitation Sequencing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000081204","descriptor_name":"Chromatin Immunoprecipitation Sequencing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001665","descriptor_name":"Binding Sites","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001665","descriptor_name":"Binding Sites","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001665","descriptor_name":"Binding Sites","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D002843","descriptor_name":"Chromatin","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D002843","descriptor_name":"Chromatin","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D002843","descriptor_name":"Chromatin","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D015203","descriptor_name":"Reproducibility of Results","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015203","descriptor_name":"Reproducibility of Results","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015203","descriptor_name":"Reproducibility of Results","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D017422","descriptor_name":"Sequence Analysis, DNA","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D017422","descriptor_name":"Sequence Analysis, DNA","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D017422","descriptor_name":"Sequence Analysis, DNA","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D059014","descriptor_name":"High-Throughput Nucleotide Sequencing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D059014","descriptor_name":"High-Throughput Nucleotide Sequencing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D059014","descriptor_name":"High-Throughput Nucleotide Sequencing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":3,"locations":[{"id":"doi:10.1093/bioinformatics/btz150","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btz150","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/35/19/3592/30061691/btz150.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},{"id":"pmid:30824903","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/30824903","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics (Oxford, England)","raw_type":null},{"id":"pmh:oai:europepmc.org:5733246","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/6761936","pdf_url":null,"source":{"id":"https://openalex.org/S4306400806","display_name":"Europe PMC (PubMed Central)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1303153112","host_organization_name":"European Bioinformatics Institute","host_organization_lineage":["https://openalex.org/I1303153112"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1093/bioinformatics/btz150","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btz150","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/35/19/3592/30061691/btz150.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G8630945844","display_name":null,"funder_award_id":"328154-2014","funder_id":"https://openalex.org/F4320334593","funder_display_name":"Natural Sciences and Engineering Research Council of Canada"}],"funders":[{"id":"https://openalex.org/F4320334593","display_name":"Natural Sciences and Engineering Research Council of Canada","ror":"https://ror.org/01h531d29"}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2951421219.pdf","grobid_xml":"https://content.openalex.org/works/W2951421219.grobid-xml"},"referenced_works_count":40,"referenced_works":["https://openalex.org/W1496357020","https://openalex.org/W1525545007","https://openalex.org/W1585888846","https://openalex.org/W1964733653","https://openalex.org/W2001554877","https://openalex.org/W2009660843","https://openalex.org/W2060064237","https://openalex.org/W2065103652","https://openalex.org/W2074017816","https://openalex.org/W2076154138","https://openalex.org/W2081942683","https://openalex.org/W2084191969","https://openalex.org/W2085184586","https://openalex.org/W2087056061","https://openalex.org/W2092988184","https://openalex.org/W2093146349","https://openalex.org/W2095855903","https://openalex.org/W2097220641","https://openalex.org/W2110065044","https://openalex.org/W2118515267","https://openalex.org/W2119558943","https://openalex.org/W2124514674","https://openalex.org/W2125114453","https://openalex.org/W2129111449","https://openalex.org/W2132215769","https://openalex.org/W2141222038","https://openalex.org/W2146648681","https://openalex.org/W2158226173","https://openalex.org/W2162530919","https://openalex.org/W2168642461","https://openalex.org/W2171622167","https://openalex.org/W2171808845","https://openalex.org/W2239579513","https://openalex.org/W2259938310","https://openalex.org/W2556805640","https://openalex.org/W2601893679","https://openalex.org/W2950930090","https://openalex.org/W3103154150","https://openalex.org/W3104066961","https://openalex.org/W6748845278"],"related_works":["https://openalex.org/W2113381189","https://openalex.org/W1995992573","https://openalex.org/W154531455","https://openalex.org/W2058846847","https://openalex.org/W3008469829","https://openalex.org/W3000705684","https://openalex.org/W3174861742","https://openalex.org/W2088387197","https://openalex.org/W1978901256","https://openalex.org/W1976797354"],"abstract_inverted_index":{"Supplementary":[0],"data":[1],"are":[2],"available":[3],"at":[4],"Bioinformatics":[5],"online.":[6]},"counts_by_year":[{"year":2025,"cited_by_count":2},{"year":2022,"cited_by_count":1},{"year":2021,"cited_by_count":3},{"year":2020,"cited_by_count":1},{"year":2019,"cited_by_count":1}],"updated_date":"2026-04-09T08:11:56.329763","created_date":"2025-10-10T00:00:00"}
