{"id":"https://openalex.org/W2886476442","doi":"https://doi.org/10.1093/bioinformatics/btz086","title":"IGLOSS: iterative gapless local similarity search","display_name":"IGLOSS: iterative gapless local similarity search","publication_year":2019,"publication_date":"2019-02-04","ids":{"openalex":"https://openalex.org/W2886476442","doi":"https://doi.org/10.1093/bioinformatics/btz086","mag":"2886476442","pmid":"https://pubmed.ncbi.nlm.nih.gov/30721953"},"language":"en","primary_location":{"id":"doi:10.1093/bioinformatics/btz086","is_oa":false,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btz086","pdf_url":null,"source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"type":"preprint","indexed_in":["arxiv","crossref","datacite","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"green","oa_url":"https://arxiv.org/pdf/1807.11862","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5056568496","display_name":"Braslav Rabar","orcid":null},"institutions":[{"id":"https://openalex.org/I181343428","display_name":"University of Zagreb","ror":"https://ror.org/00mv6sv71","country_code":"HR","type":"education","lineage":["https://openalex.org/I181343428"]}],"countries":["HR"],"is_corresponding":true,"raw_author_name":"Braslav Rabar","raw_affiliation_strings":["Mathematics Department, Faculty of Natural Sciences and Mathematics , Zagreb, Croatia"],"affiliations":[{"raw_affiliation_string":"Mathematics Department, Faculty of Natural Sciences and Mathematics , Zagreb, Croatia","institution_ids":["https://openalex.org/I181343428"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5005077366","display_name":"Maja Zagor\u0161\u010dak","orcid":"https://orcid.org/0000-0002-1669-6482"},"institutions":[{"id":"https://openalex.org/I4210140619","display_name":"National Institute of Biology","ror":"https://ror.org/03s5t0r17","country_code":"SI","type":"facility","lineage":["https://openalex.org/I4210140619"]}],"countries":["SI"],"is_corresponding":false,"raw_author_name":"Maja Zagor\u0161\u010dak","raw_affiliation_strings":["Department of Biotechnology and Systems Biology, National Institute of Biology , Ljubljana, Slovenia"],"affiliations":[{"raw_affiliation_string":"Department of Biotechnology and Systems Biology, National Institute of Biology , Ljubljana, Slovenia","institution_ids":["https://openalex.org/I4210140619"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5033158884","display_name":"Strahil Ristov","orcid":"https://orcid.org/0000-0001-6039-0838"},"institutions":[{"id":"https://openalex.org/I4210123216","display_name":"Ru\u0111er Bo\u0161kovi\u0107 Institute","ror":"https://ror.org/02mw21745","country_code":"HR","type":"facility","lineage":["https://openalex.org/I4210123216"]}],"countries":["HR"],"is_corresponding":false,"raw_author_name":"Strahil Ristov","raw_affiliation_strings":["Division of Electronics, Ru\u0111er Bo\u0161kovi\u0107 Institute , Zagreb, Croatia"],"affiliations":[{"raw_affiliation_string":"Division of Electronics, Ru\u0111er Bo\u0161kovi\u0107 Institute , Zagreb, Croatia","institution_ids":["https://openalex.org/I4210123216"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5090097502","display_name":"Martin Rosenzweig","orcid":null},"institutions":[{"id":"https://openalex.org/I181343428","display_name":"University of Zagreb","ror":"https://ror.org/00mv6sv71","country_code":"HR","type":"education","lineage":["https://openalex.org/I181343428"]}],"countries":["HR"],"is_corresponding":false,"raw_author_name":"Martin Rosenzweig","raw_affiliation_strings":["Mathematics Department, Faculty of Natural Sciences and Mathematics , Zagreb, Croatia"],"affiliations":[{"raw_affiliation_string":"Mathematics Department, Faculty of Natural Sciences and Mathematics , Zagreb, Croatia","institution_ids":["https://openalex.org/I181343428"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5061220783","display_name":"Pavle Goldstein","orcid":null},"institutions":[{"id":"https://openalex.org/I181343428","display_name":"University of Zagreb","ror":"https://ror.org/00mv6sv71","country_code":"HR","type":"education","lineage":["https://openalex.org/I181343428"]}],"countries":["HR"],"is_corresponding":false,"raw_author_name":"Pavle Goldstein","raw_affiliation_strings":["Mathematics Department, Faculty of Natural Sciences and Mathematics , Zagreb, Croatia"],"affiliations":[{"raw_affiliation_string":"Mathematics Department, Faculty of Natural Sciences and Mathematics , Zagreb, Croatia","institution_ids":["https://openalex.org/I181343428"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":5,"corresponding_author_ids":["https://openalex.org/A5056568496"],"corresponding_institution_ids":["https://openalex.org/I181343428"],"apc_list":{"value":3618,"currency":"USD","value_usd":3618},"apc_paid":null,"fwci":0.0,"has_fulltext":true,"cited_by_count":0,"citation_normalized_percentile":{"value":0.00231631,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":null,"biblio":{"volume":"35","issue":"18","first_page":"3491","last_page":"3492"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9991999864578247,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9991999864578247,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12254","display_name":"Machine Learning in Bioinformatics","score":0.9934999942779541,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11269","display_name":"Algorithms and Data Compression","score":0.9907000064849854,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/similarity","display_name":"Similarity (geometry)","score":0.7523414492607117},{"id":"https://openalex.org/keywords/sequence","display_name":"Sequence (biology)","score":0.7024728655815125},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6094903349876404},{"id":"https://openalex.org/keywords/relevance","display_name":"Relevance (law)","score":0.5576691031455994},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.47566789388656616},{"id":"https://openalex.org/keywords/nearest-neighbor-search","display_name":"Nearest neighbor search","score":0.4545459449291229},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.4162823557853699},{"id":"https://openalex.org/keywords/information-retrieval","display_name":"Information retrieval","score":0.4105070233345032},{"id":"https://openalex.org/keywords/pattern-recognition","display_name":"Pattern recognition (psychology)","score":0.3520001173019409},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.13616356253623962},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.06609681248664856}],"concepts":[{"id":"https://openalex.org/C103278499","wikidata":"https://www.wikidata.org/wiki/Q254465","display_name":"Similarity (geometry)","level":3,"score":0.7523414492607117},{"id":"https://openalex.org/C2778112365","wikidata":"https://www.wikidata.org/wiki/Q3511065","display_name":"Sequence (biology)","level":2,"score":0.7024728655815125},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6094903349876404},{"id":"https://openalex.org/C158154518","wikidata":"https://www.wikidata.org/wiki/Q7310970","display_name":"Relevance (law)","level":2,"score":0.5576691031455994},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.47566789388656616},{"id":"https://openalex.org/C116738811","wikidata":"https://www.wikidata.org/wiki/Q608751","display_name":"Nearest neighbor search","level":2,"score":0.4545459449291229},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.4162823557853699},{"id":"https://openalex.org/C23123220","wikidata":"https://www.wikidata.org/wiki/Q816826","display_name":"Information retrieval","level":1,"score":0.4105070233345032},{"id":"https://openalex.org/C153180895","wikidata":"https://www.wikidata.org/wiki/Q7148389","display_name":"Pattern recognition (psychology)","level":2,"score":0.3520001173019409},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.13616356253623962},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.06609681248664856},{"id":"https://openalex.org/C115961682","wikidata":"https://www.wikidata.org/wiki/Q860623","display_name":"Image (mathematics)","level":2,"score":0.0},{"id":"https://openalex.org/C199539241","wikidata":"https://www.wikidata.org/wiki/Q7748","display_name":"Law","level":1,"score":0.0},{"id":"https://openalex.org/C17744445","wikidata":"https://www.wikidata.org/wiki/Q36442","display_name":"Political science","level":0,"score":0.0}],"mesh":[{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true}],"locations_count":5,"locations":[{"id":"doi:10.1093/bioinformatics/btz086","is_oa":false,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btz086","pdf_url":null,"source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},{"id":"pmid:30721953","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/30721953","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics (Oxford, England)","raw_type":null},{"id":"pmh:oai:arXiv.org:1807.11862","is_oa":true,"landing_page_url":"http://arxiv.org/abs/1807.11862","pdf_url":"https://arxiv.org/pdf/1807.11862","source":{"id":"https://openalex.org/S4306400194","display_name":"arXiv (Cornell University)","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I205783295","host_organization_name":"Cornell University","host_organization_lineage":["https://openalex.org/I205783295"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"text"},{"id":"mag:2886476442","is_oa":true,"landing_page_url":"https://arxiv.org/pdf/1807.11862.pdf","pdf_url":null,"source":{"id":"https://openalex.org/S4306400194","display_name":"arXiv (Cornell University)","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I205783295","host_organization_name":"Cornell University","host_organization_lineage":["https://openalex.org/I205783295"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"arXiv (Cornell University)","raw_type":null},{"id":"doi:10.48550/arxiv.1807.11862","is_oa":true,"landing_page_url":"https://doi.org/10.48550/arxiv.1807.11862","pdf_url":null,"source":{"id":"https://openalex.org/S4306400194","display_name":"arXiv (Cornell University)","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I205783295","host_organization_name":"Cornell University","host_organization_lineage":["https://openalex.org/I205783295"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":null,"is_accepted":false,"is_published":null,"raw_source_name":null,"raw_type":"article"}],"best_oa_location":{"id":"pmh:oai:arXiv.org:1807.11862","is_oa":true,"landing_page_url":"http://arxiv.org/abs/1807.11862","pdf_url":"https://arxiv.org/pdf/1807.11862","source":{"id":"https://openalex.org/S4306400194","display_name":"arXiv (Cornell University)","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I205783295","host_organization_name":"Cornell University","host_organization_lineage":["https://openalex.org/I205783295"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"text"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G1010573066","display_name":null,"funder_award_id":"KK.01.1.1.01.000","funder_id":"https://openalex.org/F4320335322","funder_display_name":"European Regional Development Fund"},{"id":"https://openalex.org/G2171898597","display_name":null,"funder_award_id":"KK.01.1","funder_id":"https://openalex.org/F4320335322","funder_display_name":"European Regional Development Fund"},{"id":"https://openalex.org/G2181880775","display_name":null,"funder_award_id":"KK.01.1.1.01","funder_id":"https://openalex.org/F4320335322","funder_display_name":"European Regional Development Fund"},{"id":"https://openalex.org/G2787613150","display_name":null,"funder_award_id":"IP-2018-01-7317","funder_id":"https://openalex.org/F4320322674","funder_display_name":"Hrvatska Zaklada za Znanost"},{"id":"https://openalex.org/G3464066271","display_name":null,"funder_award_id":"IP-2014-09-2285","funder_id":"https://openalex.org/F4320322674","funder_display_name":"Hrvatska Zaklada za Znanost"},{"id":"https://openalex.org/G4100563467","display_name":null,"funder_award_id":"KK.01.1.1.01.0009","funder_id":"https://openalex.org/F4320335322","funder_display_name":"European Regional Development Fund"},{"id":"https://openalex.org/G4623550797","display_name":null,"funder_award_id":"IP-2016-06-1046","funder_id":"https://openalex.org/F4320322674","funder_display_name":"Hrvatska Zaklada za Znanost"},{"id":"https://openalex.org/G608216194","display_name":null,"funder_award_id":"J7-7303","funder_id":"https://openalex.org/F4320322554","funder_display_name":"Javna Agencija za Raziskovalno Dejavnost RS"},{"id":"https://openalex.org/G8244738379","display_name":null,"funder_award_id":"KK.01.1.1.01.0009\u2014DATACROSS","funder_id":"https://openalex.org/F4320335322","funder_display_name":"European Regional Development Fund"},{"id":"https://openalex.org/G8570012161","display_name":null,"funder_award_id":"unknown","funder_id":"https://openalex.org/F4320335322","funder_display_name":"European Regional Development Fund"},{"id":"https://openalex.org/G8618518428","display_name":null,"funder_award_id":"KK.01.1.1.01.","funder_id":"https://openalex.org/F4320335322","funder_display_name":"European Regional Development Fund"},{"id":"https://openalex.org/G8953803419","display_name":null,"funder_award_id":"KK.01.1.1.01.0009","funder_id":"https://openalex.org/F4320322554","funder_display_name":"Javna Agencija za Raziskovalno Dejavnost RS"}],"funders":[{"id":"https://openalex.org/F4320322554","display_name":"Javna Agencija za Raziskovalno Dejavnost RS","ror":"https://ror.org/059bp8k51"},{"id":"https://openalex.org/F4320322674","display_name":"Hrvatska Zaklada za Znanost","ror":"https://ror.org/03n51vw80"},{"id":"https://openalex.org/F4320335322","display_name":"European Regional Development Fund","ror":"https://ror.org/00k4n6c32"}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2886476442.pdf","grobid_xml":"https://content.openalex.org/works/W2886476442.grobid-xml"},"referenced_works_count":16,"referenced_works":["https://openalex.org/W411746464","https://openalex.org/W1722029454","https://openalex.org/W1821447312","https://openalex.org/W1969051510","https://openalex.org/W1970999032","https://openalex.org/W1991133427","https://openalex.org/W2055043387","https://openalex.org/W2102067136","https://openalex.org/W2135326109","https://openalex.org/W2140952049","https://openalex.org/W2141885858","https://openalex.org/W2158572678","https://openalex.org/W2158714788","https://openalex.org/W2281439517","https://openalex.org/W2494582704","https://openalex.org/W4210400672"],"related_works":["https://openalex.org/W3098878596","https://openalex.org/W2034115630","https://openalex.org/W2118543988","https://openalex.org/W2145155821","https://openalex.org/W2495593623","https://openalex.org/W123743014","https://openalex.org/W2563784674","https://openalex.org/W2072780137","https://openalex.org/W2963017196","https://openalex.org/W99931113","https://openalex.org/W2184273369","https://openalex.org/W1554116862","https://openalex.org/W2518029512","https://openalex.org/W3004650560","https://openalex.org/W2069998774","https://openalex.org/W2187182938","https://openalex.org/W2265131923","https://openalex.org/W146057225","https://openalex.org/W2612525125","https://openalex.org/W2765633183"],"abstract_inverted_index":{"Supplementary":[0],"data":[1],"are":[2],"available":[3],"at":[4],"Bioinformatics":[5],"online.":[6]},"counts_by_year":[],"updated_date":"2026-04-10T15:06:20.359241","created_date":"2025-10-10T00:00:00"}
