{"id":"https://openalex.org/W2912466997","doi":"https://doi.org/10.1093/bioinformatics/btz063","title":"Modeling cell proliferation in human acute myeloid leukemia xenografts","display_name":"Modeling cell proliferation in human acute myeloid leukemia xenografts","publication_year":2019,"publication_date":"2019-02-06","ids":{"openalex":"https://openalex.org/W2912466997","doi":"https://doi.org/10.1093/bioinformatics/btz063","mag":"2912466997","pmid":"https://pubmed.ncbi.nlm.nih.gov/30753298"},"language":"en","primary_location":{"id":"doi:10.1093/bioinformatics/btz063","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btz063","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/35/18/3378/30024613/btz063.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"hybrid","oa_url":"https://academic.oup.com/bioinformatics/article-pdf/35/18/3378/30024613/btz063.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5043650939","display_name":"Marco S. Nobile","orcid":"https://orcid.org/0000-0002-7692-7203"},"institutions":[{"id":"https://openalex.org/I66752286","display_name":"University of Milano-Bicocca","ror":"https://ror.org/01ynf4891","country_code":"IT","type":"education","lineage":["https://openalex.org/I66752286"]}],"countries":["IT"],"is_corresponding":false,"raw_author_name":"Marco S Nobile","raw_affiliation_strings":["Department of Informatics, Systems and Communication, University of Milano-Bicocca , Milan, Italy","SYSBIO.IT Centre of Systems Biology , Milan, Italy"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Informatics, Systems and Communication, University of Milano-Bicocca , Milan, Italy","institution_ids":["https://openalex.org/I66752286"]},{"raw_affiliation_string":"SYSBIO.IT Centre of Systems Biology , Milan, Italy","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5075095822","display_name":"Thalia Vlachou","orcid":"https://orcid.org/0000-0001-5264-3591"},"institutions":[{"id":"https://openalex.org/I6141010","display_name":"European Institute of Oncology","ror":"https://ror.org/02vr0ne26","country_code":"IT","type":"healthcare","lineage":["https://openalex.org/I4210153126","https://openalex.org/I6141010"]}],"countries":["IT"],"is_corresponding":false,"raw_author_name":"Thalia Vlachou","raw_affiliation_strings":["Department of Experimental Oncology, IEO, European Institute of Oncology IRCCS , Milan, Italy"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Experimental Oncology, IEO, European Institute of Oncology IRCCS , Milan, Italy","institution_ids":["https://openalex.org/I6141010"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5081323030","display_name":"Simone Spolaor","orcid":"https://orcid.org/0000-0002-3383-367X"},"institutions":[{"id":"https://openalex.org/I66752286","display_name":"University of Milano-Bicocca","ror":"https://ror.org/01ynf4891","country_code":"IT","type":"education","lineage":["https://openalex.org/I66752286"]}],"countries":["IT"],"is_corresponding":false,"raw_author_name":"Simone Spolaor","raw_affiliation_strings":["Department of Informatics, Systems and Communication, University of Milano-Bicocca , Milan, Italy"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Informatics, Systems and Communication, University of Milano-Bicocca , Milan, Italy","institution_ids":["https://openalex.org/I66752286"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5021103019","display_name":"Daniela Bossi","orcid":"https://orcid.org/0000-0002-8507-6754"},"institutions":[{"id":"https://openalex.org/I6141010","display_name":"European Institute of Oncology","ror":"https://ror.org/02vr0ne26","country_code":"IT","type":"healthcare","lineage":["https://openalex.org/I4210153126","https://openalex.org/I6141010"]}],"countries":["IT"],"is_corresponding":false,"raw_author_name":"Daniela Bossi","raw_affiliation_strings":["Department of Experimental Oncology, IEO, European Institute of Oncology IRCCS , Milan, Italy"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Experimental Oncology, IEO, European Institute of Oncology IRCCS , Milan, Italy","institution_ids":["https://openalex.org/I6141010"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5013723473","display_name":"Paolo Cazzaniga","orcid":"https://orcid.org/0000-0001-7780-0434"},"institutions":[{"id":"https://openalex.org/I11039511","display_name":"University of Bergamo","ror":"https://ror.org/02mbd5571","country_code":"IT","type":"education","lineage":["https://openalex.org/I11039511"]}],"countries":["IT"],"is_corresponding":false,"raw_author_name":"Paolo Cazzaniga","raw_affiliation_strings":["Department of Human and Social Sciences, University of Bergamo , Bergamo, Italy","SYSBIO.IT Centre of Systems Biology , Milan, Italy"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Human and Social Sciences, University of Bergamo , Bergamo, Italy","institution_ids":["https://openalex.org/I11039511"]},{"raw_affiliation_string":"SYSBIO.IT Centre of Systems Biology , Milan, Italy","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5028673758","display_name":"Luisa Lanfrancone","orcid":"https://orcid.org/0000-0002-4523-3815"},"institutions":[{"id":"https://openalex.org/I6141010","display_name":"European Institute of Oncology","ror":"https://ror.org/02vr0ne26","country_code":"IT","type":"healthcare","lineage":["https://openalex.org/I4210153126","https://openalex.org/I6141010"]}],"countries":["IT"],"is_corresponding":false,"raw_author_name":"Luisa Lanfrancone","raw_affiliation_strings":["Department of Experimental Oncology, IEO, European Institute of Oncology IRCCS , Milan, Italy"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Experimental Oncology, IEO, European Institute of Oncology IRCCS , Milan, Italy","institution_ids":["https://openalex.org/I6141010"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5073163964","display_name":"Giancarlo Mauri","orcid":"https://orcid.org/0000-0003-3520-4022"},"institutions":[{"id":"https://openalex.org/I66752286","display_name":"University of Milano-Bicocca","ror":"https://ror.org/01ynf4891","country_code":"IT","type":"education","lineage":["https://openalex.org/I66752286"]}],"countries":["IT"],"is_corresponding":false,"raw_author_name":"Giancarlo Mauri","raw_affiliation_strings":["Department of Informatics, Systems and Communication, University of Milano-Bicocca , Milan, Italy","SYSBIO.IT Centre of Systems Biology , Milan, Italy"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Informatics, Systems and Communication, University of Milano-Bicocca , Milan, Italy","institution_ids":["https://openalex.org/I66752286"]},{"raw_affiliation_string":"SYSBIO.IT Centre of Systems Biology , Milan, Italy","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5057101865","display_name":"Pier Giuseppe Pelicci","orcid":"https://orcid.org/0000-0002-5076-2316"},"institutions":[{"id":"https://openalex.org/I189158943","display_name":"University of Milan","ror":"https://ror.org/00wjc7c48","country_code":"IT","type":"education","lineage":["https://openalex.org/I189158943"]},{"id":"https://openalex.org/I6141010","display_name":"European Institute of Oncology","ror":"https://ror.org/02vr0ne26","country_code":"IT","type":"healthcare","lineage":["https://openalex.org/I4210153126","https://openalex.org/I6141010"]}],"countries":["IT"],"is_corresponding":true,"raw_author_name":"Pier Giuseppe Pelicci","raw_affiliation_strings":["Department of Experimental Oncology, IEO, European Institute of Oncology IRCCS , Milan, Italy","Department of Oncology and Hemato-Oncology, University of Milan , Milan, Italy"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Experimental Oncology, IEO, European Institute of Oncology IRCCS , Milan, Italy","institution_ids":["https://openalex.org/I6141010"]},{"raw_affiliation_string":"Department of Oncology and Hemato-Oncology, University of Milan , Milan, Italy","institution_ids":["https://openalex.org/I189158943"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5072712347","display_name":"Daniela Besozzi","orcid":"https://orcid.org/0000-0001-5532-3059"},"institutions":[{"id":"https://openalex.org/I66752286","display_name":"University of Milano-Bicocca","ror":"https://ror.org/01ynf4891","country_code":"IT","type":"education","lineage":["https://openalex.org/I66752286"]}],"countries":["IT"],"is_corresponding":true,"raw_author_name":"Daniela Besozzi","raw_affiliation_strings":["Department of Informatics, Systems and Communication, University of Milano-Bicocca , Milan, Italy"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Informatics, Systems and Communication, University of Milano-Bicocca , Milan, Italy","institution_ids":["https://openalex.org/I66752286"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":4,"corresponding_author_ids":["https://openalex.org/A5057101865","https://openalex.org/A5072712347"],"corresponding_institution_ids":["https://openalex.org/I189158943","https://openalex.org/I6141010","https://openalex.org/I66752286"],"apc_list":{"value":3618,"currency":"USD","value_usd":3618},"apc_paid":{"value":3618,"currency":"USD","value_usd":3618},"fwci":0.9769,"has_fulltext":true,"cited_by_count":9,"citation_normalized_percentile":{"value":0.74782036,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":97},"biblio":{"volume":"35","issue":"18","first_page":"3378","last_page":"3386"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10309","display_name":"Acute Myeloid Leukemia Research","score":0.30869999527931213,"subfield":{"id":"https://openalex.org/subfields/2720","display_name":"Hematology"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},"topics":[{"id":"https://openalex.org/T10309","display_name":"Acute Myeloid Leukemia Research","score":0.30869999527931213,"subfield":{"id":"https://openalex.org/subfields/2720","display_name":"Hematology"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T11829","display_name":"Mathematical Biology Tumor Growth","score":0.13510000705718994,"subfield":{"id":"https://openalex.org/subfields/2611","display_name":"Modeling and Simulation"},"field":{"id":"https://openalex.org/fields/26","display_name":"Mathematics"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10621","display_name":"Gene Regulatory Network Analysis","score":0.07240000367164612,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/myeloid-leukemia","display_name":"Myeloid leukemia","score":0.7616579532623291},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.5827959775924683},{"id":"https://openalex.org/keywords/cell-growth","display_name":"Cell growth","score":0.49869465827941895},{"id":"https://openalex.org/keywords/population","display_name":"Population","score":0.46343690156936646},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.3737925887107849},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.3625362515449524},{"id":"https://openalex.org/keywords/cancer-research","display_name":"Cancer research","score":0.3590899705886841},{"id":"https://openalex.org/keywords/medicine","display_name":"Medicine","score":0.2506536841392517}],"concepts":[{"id":"https://openalex.org/C2778729363","wikidata":"https://www.wikidata.org/wiki/Q11688946","display_name":"Myeloid leukemia","level":2,"score":0.7616579532623291},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.5827959775924683},{"id":"https://openalex.org/C62112901","wikidata":"https://www.wikidata.org/wiki/Q189159","display_name":"Cell growth","level":2,"score":0.49869465827941895},{"id":"https://openalex.org/C2908647359","wikidata":"https://www.wikidata.org/wiki/Q2625603","display_name":"Population","level":2,"score":0.46343690156936646},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.3737925887107849},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.3625362515449524},{"id":"https://openalex.org/C502942594","wikidata":"https://www.wikidata.org/wiki/Q3421914","display_name":"Cancer research","level":1,"score":0.3590899705886841},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.2506536841392517},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.0},{"id":"https://openalex.org/C99454951","wikidata":"https://www.wikidata.org/wiki/Q932068","display_name":"Environmental health","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D002455","descriptor_name":"Cell Division","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D002455","descriptor_name":"Cell Division","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D002455","descriptor_name":"Cell Division","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015470","descriptor_name":"Leukemia, Myeloid, Acute","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D015470","descriptor_name":"Leukemia, Myeloid, Acute","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D015470","descriptor_name":"Leukemia, Myeloid, Acute","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D049109","descriptor_name":"Cell Proliferation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D049109","descriptor_name":"Cell Proliferation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D049109","descriptor_name":"Cell Proliferation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D051379","descriptor_name":"Mice","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D051379","descriptor_name":"Mice","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D051379","descriptor_name":"Mice","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D064593","descriptor_name":"Heterografts","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D064593","descriptor_name":"Heterografts","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D064593","descriptor_name":"Heterografts","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":9,"locations":[{"id":"doi:10.1093/bioinformatics/btz063","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btz063","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/35/18/3378/30024613/btz063.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},{"id":"pmid:30753298","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/30753298","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics (Oxford, England)","raw_type":null},{"id":"pmh:oai:pubmedcentral.nih.gov:6748761","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/6748761","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Bioinformatics","raw_type":"Text"},{"id":"pmh:913413","is_oa":false,"landing_page_url":"http://library.tue.nl/csp/dare/LinkToRepository.csp?recordnumber=913413","pdf_url":null,"source":{"id":"https://openalex.org/S4406922641","display_name":"TU/e Research Portal","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"ISSN:1367-4803","raw_type":"Article / Letter to the editor"},{"id":"pmh:oai:air.unimi.it:2434/656687","is_oa":true,"landing_page_url":"http://hdl.handle.net/2434/656687","pdf_url":null,"source":{"id":"https://openalex.org/S4306400516","display_name":"Archivio Istituzionale della Ricerca (Universita Degli Studi Di Milano)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I189158943","host_organization_name":"University of Milan","host_organization_lineage":["https://openalex.org/I189158943"],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"info:eu-repo/semantics/article"},{"id":"pmh:oai:aisberg.unibg.it:10446/153226","is_oa":true,"landing_page_url":"http://hdl.handle.net/10446/153226","pdf_url":null,"source":{"id":"https://openalex.org/S4377196347","display_name":"Aisberg (University of Bergamo)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I11039511","host_organization_name":"University of Bergamo","host_organization_lineage":["https://openalex.org/I11039511"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"info:eu-repo/semantics/article"},{"id":"pmh:oai:boa.unimib.it:10281/219165","is_oa":false,"landing_page_url":"http://hdl.handle.net/10281/219165","pdf_url":null,"source":{"id":"https://openalex.org/S4306401259","display_name":"BOA (University of Milano-Bicocca)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I66752286","host_organization_name":"University of Milano-Bicocca","host_organization_lineage":["https://openalex.org/I66752286"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"info:eu-repo/semantics/article"},{"id":"pmh:oai:iris.unive.it:10278/5004789","is_oa":false,"landing_page_url":"http://hdl.handle.net/10278/5004789","pdf_url":null,"source":{"id":"https://openalex.org/S4306402336","display_name":"ARCA (Universit\u00e0 Ca' Foscari Venezia)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I149461666","host_organization_name":"Ca' Foscari University of Venice","host_organization_lineage":["https://openalex.org/I149461666"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"info:eu-repo/semantics/article"},{"id":"pmh:oai:library.tue.nl:913413","is_oa":false,"landing_page_url":"http://repository.tue.nl/913413","pdf_url":null,"source":{"id":"https://openalex.org/S4406922641","display_name":"TU/e Research Portal","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"ISSN:1367-4803","raw_type":"Article / Letter to the editor"}],"best_oa_location":{"id":"doi:10.1093/bioinformatics/btz063","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btz063","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/35/18/3378/30024613/btz063.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[{"score":0.8899999856948853,"display_name":"Good health and well-being","id":"https://metadata.un.org/sdg/3"}],"awards":[],"funders":[{"id":"https://openalex.org/F4320323054","display_name":"Associazione Italiana per la Ricerca sul Cancro","ror":"https://ror.org/02g2x7380"}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2912466997.pdf","grobid_xml":"https://content.openalex.org/works/W2912466997.grobid-xml"},"referenced_works_count":32,"referenced_works":["https://openalex.org/W654059483","https://openalex.org/W1968034850","https://openalex.org/W1976811972","https://openalex.org/W1983641075","https://openalex.org/W2007978249","https://openalex.org/W2009886857","https://openalex.org/W2013329963","https://openalex.org/W2039045791","https://openalex.org/W2067354808","https://openalex.org/W2070154483","https://openalex.org/W2079039822","https://openalex.org/W2081061234","https://openalex.org/W2083551778","https://openalex.org/W2092296376","https://openalex.org/W2106142381","https://openalex.org/W2108963641","https://openalex.org/W2110114082","https://openalex.org/W2153202876","https://openalex.org/W2165603655","https://openalex.org/W2166966371","https://openalex.org/W2169023984","https://openalex.org/W2316766276","https://openalex.org/W2466930524","https://openalex.org/W2543580944","https://openalex.org/W2552591666","https://openalex.org/W2592356044","https://openalex.org/W2751846886","https://openalex.org/W3005347330","https://openalex.org/W4231346141","https://openalex.org/W4285719527","https://openalex.org/W6675356275","https://openalex.org/W6720281215"],"related_works":["https://openalex.org/W2035482751","https://openalex.org/W2375707865","https://openalex.org/W2118894183","https://openalex.org/W4236316986","https://openalex.org/W2990397977","https://openalex.org/W1570595782","https://openalex.org/W2774908952","https://openalex.org/W2363321557","https://openalex.org/W4238180331","https://openalex.org/W2296384492"],"abstract_inverted_index":{"MOTIVATION:":[0],"Acute":[1],"myeloid":[2],"leukemia":[3],"(AML)":[4],"is":[5,26,68,146],"one":[6],"of":[7,64,86,119,130,174,197,204,224],"the":[8,62,116,162,171,183,200,205,210,227,237,244],"most":[9],"common":[10],"hematological":[11],"malignancies,":[12],"characterized":[13,193],"by":[14,187,194],"high":[15],"relapse":[16],"and":[17,36,50,61,100,190,202,226],"mortality":[18],"rates.":[19],"The":[20,221],"inherent":[21,117],"intra-tumor":[22],"heterogeneity":[23],"in":[24,33,58,133,143,199,231],"AML":[25,175],"thought":[27],"to":[28,38,57,71,82,103,126,159,212],"play":[29],"an":[30],"important":[31,184],"role":[32,185],"disease":[34],"recurrence":[35],"resistance":[37],"chemotherapy.":[39],"Although":[40],"experimental":[41,137,228],"protocols":[42],"for":[43],"cell":[44,87,105,120,131,216],"proliferation":[45,106,132],"studies":[46],"are":[47,53,234,252],"well":[48],"established":[49],"widespread,":[51],"they":[52],"not":[54],"easily":[55],"applicable":[56],"vivo":[59],"contexts,":[60],"analysis":[63],"related":[65],"time-series":[66],"data":[67,138,229,251],"often":[69],"complex":[70],"achieve.":[72],"To":[73],"overcome":[74],"these":[75],"limitations,":[76],"model-driven":[77],"approaches":[78],"can":[79],"be":[80],"exploited":[81],"investigate":[83,104],"different":[84,128,195],"aspects":[85],"population":[88],"dynamics.":[89],"RESULTS:":[90],"In":[91],"this":[92,232],"work,":[93],"we":[94],"present":[95],"ProCell,":[96],"a":[97,154],"novel":[98],"modeling":[99],"simulation":[101],"framework":[102],"dynamics":[107],"that,":[108],"differently":[109],"from":[110,140],"other":[111],"approaches,":[112],"takes":[113],"into":[114],"account":[115],"stochasticity":[118],"division":[121,198],"events.":[122],"We":[123],"apply":[124],"ProCell":[125,145,225],"compare":[127],"models":[129,163],"AML,":[134],"notably":[135],"leveraging":[136],"derived":[139],"human":[141],"xenografts":[142],"mice.":[144],"coupled":[147],"with":[148,177],"Fuzzy":[149],"Self-Tuning":[150],"Particle":[151],"Swarm":[152],"Optimization,":[153],"swarm-intelligence":[155],"settings-free":[156],"algorithm":[157],"used":[158,230],"automatically":[160],"infer":[161],"parameterizations.":[164],"Our":[165],"results":[166],"provide":[167],"new":[168],"insights":[169],"on":[170,241],"intricate":[172],"organization":[173],"cells":[176,189,192],"highly":[178],"heterogeneous":[179],"proliferative":[180],"potential,":[181],"highlighting":[182],"played":[186],"quiescent":[188],"proliferating":[191],"rates":[196],"progression":[201],"evolution":[203],"disease,":[206],"thus":[207],"hinting":[208],"at":[209,243,254],"necessity":[211],"further":[213],"characterize":[214],"tumor":[215],"subpopulations.":[217],"AVAILABILITY":[218],"AND":[219],"IMPLEMENTATION:":[220],"source":[222],"code":[223],"work":[233],"available":[235,253],"under":[236],"GPL":[238],"2.0":[239],"license":[240],"GITHUB":[242],"following":[245],"URL:":[246],"https://github.com/aresio/ProCell.":[247],"SUPPLEMENTARY":[248],"INFORMATION:":[249],"Supplementary":[250],"Bioinformatics":[255],"online.":[256]},"counts_by_year":[{"year":2025,"cited_by_count":1},{"year":2023,"cited_by_count":1},{"year":2022,"cited_by_count":1},{"year":2021,"cited_by_count":1},{"year":2020,"cited_by_count":3},{"year":2019,"cited_by_count":2}],"updated_date":"2026-08-11T07:18:39.950985","created_date":"2025-10-10T00:00:00"}
