{"id":"https://openalex.org/W2909409778","doi":"https://doi.org/10.1093/bioinformatics/btz016","title":"MULTiPly: a novel multi-layer predictor for discovering general and specific types of promoters","display_name":"MULTiPly: a novel multi-layer predictor for discovering general and specific types of promoters","publication_year":2019,"publication_date":"2019-01-05","ids":{"openalex":"https://openalex.org/W2909409778","doi":"https://doi.org/10.1093/bioinformatics/btz016","mag":"2909409778","pmid":"https://pubmed.ncbi.nlm.nih.gov/30649179"},"language":"en","primary_location":{"id":"doi:10.1093/bioinformatics/btz016","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btz016","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/35/17/2957/29591842/btz016.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"bronze","oa_url":"https://academic.oup.com/bioinformatics/article-pdf/35/17/2957/29591842/btz016.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5100437731","display_name":"Meng Zhang","orcid":"https://orcid.org/0000-0002-2690-5954"},"institutions":[{"id":"https://openalex.org/I43313876","display_name":"Dalian Maritime University","ror":"https://ror.org/002b7nr53","country_code":"CN","type":"education","lineage":["https://openalex.org/I43313876"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Meng Zhang","raw_affiliation_strings":["Dalian Maritime University School of Science, , Dalian, China"],"affiliations":[{"raw_affiliation_string":"Dalian Maritime University School of Science, , Dalian, China","institution_ids":["https://openalex.org/I43313876"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5063409460","display_name":"Fuyi Li","orcid":"https://orcid.org/0000-0001-5216-3213"},"institutions":[{"id":"https://openalex.org/I56590836","display_name":"Monash University","ror":"https://ror.org/02bfwt286","country_code":"AU","type":"education","lineage":["https://openalex.org/I56590836"]},{"id":"https://openalex.org/I2799424032","display_name":"Discovery Institute","ror":"https://ror.org/05t8s3y29","country_code":"US","type":"nonprofit","lineage":["https://openalex.org/I2799424032"]}],"countries":["AU","US"],"is_corresponding":false,"raw_author_name":"Fuyi Li","raw_affiliation_strings":["Biomedicine Discovery Institute and Department of Biochemistry and Molecular Biology","Monash Centre for Data Science, Faculty of Information Technology, Monash University , Melbourne, VIC, Australia"],"affiliations":[{"raw_affiliation_string":"Biomedicine Discovery Institute and Department of Biochemistry and Molecular Biology","institution_ids":["https://openalex.org/I2799424032"]},{"raw_affiliation_string":"Monash Centre for Data Science, Faculty of Information Technology, Monash University , Melbourne, VIC, Australia","institution_ids":["https://openalex.org/I56590836"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5042243195","display_name":"Tatiana T. Marquez\u2010Lago","orcid":"https://orcid.org/0000-0003-3279-5592"},"institutions":[{"id":"https://openalex.org/I32389192","display_name":"University of Alabama at Birmingham","ror":"https://ror.org/008s83205","country_code":"US","type":"education","lineage":["https://openalex.org/I32389192"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Tatiana T Marquez-Lago","raw_affiliation_strings":["University of Alabama at Birmingham Department of Cell, Developmental and Integrative Biology, School of Medicine, , Birmingham, AL, USA","University of Alabama at Birmingham Department of Genetics, Developmental and Integrative Biology, School of Medicine, , Birmingham, AL, USA"],"affiliations":[{"raw_affiliation_string":"University of Alabama at Birmingham Department of Cell, Developmental and Integrative Biology, School of Medicine, , Birmingham, AL, USA","institution_ids":["https://openalex.org/I32389192"]},{"raw_affiliation_string":"University of Alabama at Birmingham Department of Genetics, Developmental and Integrative Biology, School of Medicine, , Birmingham, AL, USA","institution_ids":["https://openalex.org/I32389192"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5042438246","display_name":"Andr\u00e9 Leier","orcid":"https://orcid.org/0000-0002-2647-2693"},"institutions":[{"id":"https://openalex.org/I32389192","display_name":"University of Alabama at Birmingham","ror":"https://ror.org/008s83205","country_code":"US","type":"education","lineage":["https://openalex.org/I32389192"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Andr\u00e9 Leier","raw_affiliation_strings":["University of Alabama at Birmingham Department of Cell, Developmental and Integrative Biology, School of Medicine, , Birmingham, AL, USA","University of Alabama at Birmingham Department of Genetics, Developmental and Integrative Biology, School of Medicine, , Birmingham, AL, USA"],"affiliations":[{"raw_affiliation_string":"University of Alabama at Birmingham Department of Cell, Developmental and Integrative Biology, School of Medicine, , Birmingham, AL, USA","institution_ids":["https://openalex.org/I32389192"]},{"raw_affiliation_string":"University of Alabama at Birmingham Department of Genetics, Developmental and Integrative Biology, School of Medicine, , Birmingham, AL, USA","institution_ids":["https://openalex.org/I32389192"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5036674066","display_name":"Cunshuo Fan","orcid":"https://orcid.org/0000-0002-5571-433X"},"institutions":[{"id":"https://openalex.org/I89652312","display_name":"Northwest A&F University","ror":"https://ror.org/0051rme32","country_code":"CN","type":"education","lineage":["https://openalex.org/I89652312"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Cunshuo Fan","raw_affiliation_strings":["Northwest A&F University College of Information Engineering, , Yangling, China"],"affiliations":[{"raw_affiliation_string":"Northwest A&F University College of Information Engineering, , Yangling, China","institution_ids":["https://openalex.org/I89652312"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5027208445","display_name":"Chee Keong Kwoh","orcid":"https://orcid.org/0000-0002-8547-6387"},"institutions":[{"id":"https://openalex.org/I172675005","display_name":"Nanyang Technological University","ror":"https://ror.org/02e7b5302","country_code":"SG","type":"education","lineage":["https://openalex.org/I172675005"]}],"countries":["SG"],"is_corresponding":false,"raw_author_name":"Chee Keong Kwoh","raw_affiliation_strings":["Nanyang Technological University School of Computer Science and Engineering, , Singapore, Singapore"],"affiliations":[{"raw_affiliation_string":"Nanyang Technological University School of Computer Science and Engineering, , Singapore, Singapore","institution_ids":["https://openalex.org/I172675005"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5113500576","display_name":"Kuo\u2010Chen Chou","orcid":null},"institutions":[{"id":"https://openalex.org/I4210098239","display_name":"The Gordon Life Science Institute","ror":"https://ror.org/0135ffj82","country_code":"US","type":"nonprofit","lineage":["https://openalex.org/I4210098239"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Kuo-Chen Chou","raw_affiliation_strings":["Gordon Life Science Institute , Boston, MA, USA"],"affiliations":[{"raw_affiliation_string":"Gordon Life Science Institute , Boston, MA, USA","institution_ids":["https://openalex.org/I4210098239"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5012709797","display_name":"Jiangning Song","orcid":"https://orcid.org/0000-0001-8031-9086"},"institutions":[{"id":"https://openalex.org/I4210146297","display_name":"ARC Centre of Excellence in Advanced Molecular Imaging","ror":"https://ror.org/051e7s436","country_code":"AU","type":"facility","lineage":["https://openalex.org/I1337719021","https://openalex.org/I2801453606","https://openalex.org/I4210132349","https://openalex.org/I4210146297","https://openalex.org/I56590836"]},{"id":"https://openalex.org/I56590836","display_name":"Monash University","ror":"https://ror.org/02bfwt286","country_code":"AU","type":"education","lineage":["https://openalex.org/I56590836"]},{"id":"https://openalex.org/I2799424032","display_name":"Discovery Institute","ror":"https://ror.org/05t8s3y29","country_code":"US","type":"nonprofit","lineage":["https://openalex.org/I2799424032"]}],"countries":["AU","US"],"is_corresponding":true,"raw_author_name":"Jiangning Song","raw_affiliation_strings":["ARC Centre of Excellence in Advanced Molecular Imaging, Monash University , Melbourne, VIC, Australia","Biomedicine Discovery Institute and Department of Biochemistry and Molecular Biology","Monash Centre for Data Science, Faculty of Information Technology, Monash University , Melbourne, VIC, Australia"],"affiliations":[{"raw_affiliation_string":"ARC Centre of Excellence in Advanced Molecular Imaging, Monash University , Melbourne, VIC, Australia","institution_ids":["https://openalex.org/I4210146297","https://openalex.org/I56590836"]},{"raw_affiliation_string":"Biomedicine Discovery Institute and Department of Biochemistry and Molecular Biology","institution_ids":["https://openalex.org/I2799424032"]},{"raw_affiliation_string":"Monash Centre for Data Science, Faculty of Information Technology, Monash University , Melbourne, VIC, Australia","institution_ids":["https://openalex.org/I56590836"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5066126756","display_name":"Cangzhi Jia","orcid":"https://orcid.org/0000-0002-4682-2881"},"institutions":[{"id":"https://openalex.org/I89652312","display_name":"Northwest A&F University","ror":"https://ror.org/0051rme32","country_code":"CN","type":"education","lineage":["https://openalex.org/I89652312"]},{"id":"https://openalex.org/I43313876","display_name":"Dalian Maritime University","ror":"https://ror.org/002b7nr53","country_code":"CN","type":"education","lineage":["https://openalex.org/I43313876"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Cangzhi Jia","raw_affiliation_strings":["Dalian Maritime University School of Science, , Dalian, China","Northwest A&F University College of Information Engineering, , Yangling, China"],"affiliations":[{"raw_affiliation_string":"Dalian Maritime University School of Science, , Dalian, China","institution_ids":["https://openalex.org/I43313876"]},{"raw_affiliation_string":"Northwest A&F University College of Information Engineering, , Yangling, China","institution_ids":["https://openalex.org/I89652312"]}]}],"institutions":[],"countries_distinct_count":4,"institutions_distinct_count":9,"corresponding_author_ids":["https://openalex.org/A5012709797","https://openalex.org/A5066126756","https://openalex.org/A5113500576"],"corresponding_institution_ids":["https://openalex.org/I2799424032","https://openalex.org/I4210098239","https://openalex.org/I4210146297","https://openalex.org/I43313876","https://openalex.org/I56590836","https://openalex.org/I89652312"],"apc_list":{"value":3618,"currency":"USD","value_usd":3618},"apc_paid":null,"fwci":7.932,"has_fulltext":false,"cited_by_count":132,"citation_normalized_percentile":{"value":0.98277725,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":99,"max":100},"biblio":{"volume":"35","issue":"17","first_page":"2957","last_page":"2965"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T12254","display_name":"Machine Learning in Bioinformatics","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T12254","display_name":"Machine Learning in Bioinformatics","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10521","display_name":"RNA and protein synthesis mechanisms","score":0.9991999864578247,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9983000159263611,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/promoter","display_name":"Promoter","score":0.7422747015953064},{"id":"https://openalex.org/keywords/benchmarking","display_name":"Benchmarking","score":0.5922822952270508},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.5692419409751892},{"id":"https://openalex.org/keywords/benchmark","display_name":"Benchmark (surveying)","score":0.5288858413696289},{"id":"https://openalex.org/keywords/feature","display_name":"Feature (linguistics)","score":0.47228842973709106},{"id":"https://openalex.org/keywords/feature-selection","display_name":"Feature selection","score":0.4563610255718231},{"id":"https://openalex.org/keywords/jackknife-resampling","display_name":"Jackknife resampling","score":0.4214906692504883},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.40671080350875854},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.4008217453956604},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.3833763599395752},{"id":"https://openalex.org/keywords/machine-learning","display_name":"Machine learning","score":0.3810276985168457},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.2743815779685974},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.2612302303314209},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.22260966897010803},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.19859838485717773},{"id":"https://openalex.org/keywords/statistics","display_name":"Statistics","score":0.10471057891845703},{"id":"https://openalex.org/keywords/gene-expression","display_name":"Gene expression","score":0.09571671485900879}],"concepts":[{"id":"https://openalex.org/C101762097","wikidata":"https://www.wikidata.org/wiki/Q224093","display_name":"Promoter","level":4,"score":0.7422747015953064},{"id":"https://openalex.org/C86251818","wikidata":"https://www.wikidata.org/wiki/Q816754","display_name":"Benchmarking","level":2,"score":0.5922822952270508},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.5692419409751892},{"id":"https://openalex.org/C185798385","wikidata":"https://www.wikidata.org/wiki/Q1161707","display_name":"Benchmark (surveying)","level":2,"score":0.5288858413696289},{"id":"https://openalex.org/C2776401178","wikidata":"https://www.wikidata.org/wiki/Q12050496","display_name":"Feature (linguistics)","level":2,"score":0.47228842973709106},{"id":"https://openalex.org/C148483581","wikidata":"https://www.wikidata.org/wiki/Q446488","display_name":"Feature selection","level":2,"score":0.4563610255718231},{"id":"https://openalex.org/C81790035","wikidata":"https://www.wikidata.org/wiki/Q847158","display_name":"Jackknife resampling","level":3,"score":0.4214906692504883},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.40671080350875854},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.4008217453956604},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.3833763599395752},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.3810276985168457},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.2743815779685974},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.2612302303314209},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.22260966897010803},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.19859838485717773},{"id":"https://openalex.org/C105795698","wikidata":"https://www.wikidata.org/wiki/Q12483","display_name":"Statistics","level":1,"score":0.10471057891845703},{"id":"https://openalex.org/C150194340","wikidata":"https://www.wikidata.org/wiki/Q26972","display_name":"Gene expression","level":3,"score":0.09571671485900879},{"id":"https://openalex.org/C162853370","wikidata":"https://www.wikidata.org/wiki/Q39809","display_name":"Marketing","level":1,"score":0.0},{"id":"https://openalex.org/C185429906","wikidata":"https://www.wikidata.org/wiki/Q1130160","display_name":"Estimator","level":2,"score":0.0},{"id":"https://openalex.org/C205649164","wikidata":"https://www.wikidata.org/wiki/Q1071","display_name":"Geography","level":0,"score":0.0},{"id":"https://openalex.org/C41895202","wikidata":"https://www.wikidata.org/wiki/Q8162","display_name":"Linguistics","level":1,"score":0.0},{"id":"https://openalex.org/C138885662","wikidata":"https://www.wikidata.org/wiki/Q5891","display_name":"Philosophy","level":0,"score":0.0},{"id":"https://openalex.org/C13280743","wikidata":"https://www.wikidata.org/wiki/Q131089","display_name":"Geodesy","level":1,"score":0.0},{"id":"https://openalex.org/C144133560","wikidata":"https://www.wikidata.org/wiki/Q4830453","display_name":"Business","level":0,"score":0.0}],"mesh":[{"descriptor_ui":"D001499","descriptor_name":"Bayes Theorem","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001499","descriptor_name":"Bayes Theorem","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001499","descriptor_name":"Bayes Theorem","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011401","descriptor_name":"Promoter Regions, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D011401","descriptor_name":"Promoter Regions, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D011401","descriptor_name":"Promoter Regions, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D024363","descriptor_name":"Transcription Initiation Site","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D024363","descriptor_name":"Transcription Initiation Site","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D024363","descriptor_name":"Transcription Initiation Site","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":4,"locations":[{"id":"doi:10.1093/bioinformatics/btz016","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btz016","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/35/17/2957/29591842/btz016.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},{"id":"pmid:30649179","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/30649179","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics (Oxford, England)","raw_type":null},{"id":"pmh:oai:digital.library.adelaide.edu.au:2440/139599","is_oa":false,"landing_page_url":"https://hdl.handle.net/2440/139599","pdf_url":null,"source":{"id":"https://openalex.org/S4306401835","display_name":"Adelaide Research & Scholarship (AR&S) (University of Adelaide)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I5681781","host_organization_name":"The University of Adelaide","host_organization_lineage":["https://openalex.org/I5681781"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"http://dx.doi.org/10.1093/bioinformatics/btz016","raw_type":"Journal article"},{"id":"pmh:oai:pubmedcentral.nih.gov:6736106","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/6736106","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Bioinformatics","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1093/bioinformatics/btz016","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btz016","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/35/17/2957/29591842/btz016.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[{"display_name":"Partnerships for the goals","score":0.4300000071525574,"id":"https://metadata.un.org/sdg/17"}],"awards":[{"id":"https://openalex.org/G3131219531","display_name":null,"funder_award_id":"APP1127948","funder_id":"https://openalex.org/F4320334705","funder_display_name":"National Health and Medical Research Council"},{"id":"https://openalex.org/G3214361971","display_name":null,"funder_award_id":"3132018227","funder_id":"https://openalex.org/F4320335787","funder_display_name":"Fundamental Research Funds for the Central Universities"},{"id":"https://openalex.org/G5076668117","display_name":null,"funder_award_id":"R01 AI111965","funder_id":"https://openalex.org/F4320332161","funder_display_name":"National Institutes of Health"},{"id":"https://openalex.org/G550814068","display_name":null,"funder_award_id":"LP110200333","funder_id":"https://openalex.org/F4320338275","funder_display_name":"Division of Arctic Sciences"},{"id":"https://openalex.org/G6032127639","display_name":null,"funder_award_id":"DP120104460","funder_id":"https://openalex.org/F4320338275","funder_display_name":"Division of Arctic Sciences"},{"id":"https://openalex.org/G6267159765","display_name":null,"funder_award_id":"APP1144652","funder_id":"https://openalex.org/F4320334705","funder_display_name":"National Health and Medical Research Council"},{"id":"https://openalex.org/G7985853483","display_name":null,"funder_award_id":"3132016306","funder_id":"https://openalex.org/F4320335787","funder_display_name":"Fundamental Research Funds for the Central Universities"},{"id":"https://openalex.org/G8741902138","display_name":null,"funder_award_id":"APP490989","funder_id":"https://openalex.org/F4320334705","funder_display_name":"National Health and Medical Research Council"}],"funders":[{"id":"https://openalex.org/F4320320971","display_name":"Monash University","ror":"https://ror.org/02bfwt286"},{"id":"https://openalex.org/F4320332161","display_name":"National Institutes of Health","ror":"https://ror.org/01cwqze88"},{"id":"https://openalex.org/F4320334704","display_name":"Australian Research Council","ror":"https://ror.org/05mmh0f86"},{"id":"https://openalex.org/F4320334705","display_name":"National Health and Medical Research Council","ror":"https://ror.org/011kf5r70"},{"id":"https://openalex.org/F4320335787","display_name":"Fundamental Research Funds for the Central Universities","ror":null},{"id":"https://openalex.org/F4320337355","display_name":"National Institute of Allergy and Infectious Diseases","ror":"https://ror.org/043z4tv69"},{"id":"https://openalex.org/F4320338275","display_name":"Division of Arctic Sciences","ror":"https://ror.org/02trddg58"}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2909409778.pdf","grobid_xml":"https://content.openalex.org/works/W2909409778.grobid-xml"},"referenced_works_count":97,"referenced_works":["https://openalex.org/W179179905","https://openalex.org/W1149957381","https://openalex.org/W1494484168","https://openalex.org/W1580341506","https://openalex.org/W1678356000","https://openalex.org/W1906342810","https://openalex.org/W1943237984","https://openalex.org/W1964497435","https://openalex.org/W1973310562","https://openalex.org/W1978643997","https://openalex.org/W1991141438","https://openalex.org/W1996774362","https://openalex.org/W2001349696","https://openalex.org/W2021823827","https://openalex.org/W2034070267","https://openalex.org/W2037611385","https://openalex.org/W2048356293","https://openalex.org/W2052892694","https://openalex.org/W2080748087","https://openalex.org/W2088117005","https://openalex.org/W2093080369","https://openalex.org/W2093897670","https://openalex.org/W2100805904","https://openalex.org/W2101492309","https://openalex.org/W2103404876","https://openalex.org/W2103525038","https://openalex.org/W2106141559","https://openalex.org/W2115024759","https://openalex.org/W2117357746","https://openalex.org/W2119331235","https://openalex.org/W2120026469","https://openalex.org/W2121184378","https://openalex.org/W2121595877","https://openalex.org/W2123525093","https://openalex.org/W2124266758","https://openalex.org/W2136291205","https://openalex.org/W2152339342","https://openalex.org/W2152365098","https://openalex.org/W2152705149","https://openalex.org/W2153635508","https://openalex.org/W2160165249","https://openalex.org/W2168012258","https://openalex.org/W2237040395","https://openalex.org/W2281326002","https://openalex.org/W2313411748","https://openalex.org/W2400814742","https://openalex.org/W2462807123","https://openalex.org/W2526763554","https://openalex.org/W2526784604","https://openalex.org/W2528774686","https://openalex.org/W2564829293","https://openalex.org/W2565121836","https://openalex.org/W2587688848","https://openalex.org/W2599457435","https://openalex.org/W2605516250","https://openalex.org/W2606288994","https://openalex.org/W2608035254","https://openalex.org/W2609394459","https://openalex.org/W2614370829","https://openalex.org/W2737592062","https://openalex.org/W2749697459","https://openalex.org/W2751166719","https://openalex.org/W2754289562","https://openalex.org/W2759893831","https://openalex.org/W2766389776","https://openalex.org/W2768705872","https://openalex.org/W2792363117","https://openalex.org/W2793168264","https://openalex.org/W2794797435","https://openalex.org/W2799200068","https://openalex.org/W2800333284","https://openalex.org/W2802078840","https://openalex.org/W2806146459","https://openalex.org/W2810225085","https://openalex.org/W2884581375","https://openalex.org/W2890951984","https://openalex.org/W2891420113","https://openalex.org/W2891918406","https://openalex.org/W2892079508","https://openalex.org/W2894836881","https://openalex.org/W2911964244","https://openalex.org/W2913961829","https://openalex.org/W4237059501","https://openalex.org/W6607259140","https://openalex.org/W6673633802","https://openalex.org/W6679919982","https://openalex.org/W6731166544","https://openalex.org/W6733365994","https://openalex.org/W6736662874","https://openalex.org/W6744949851","https://openalex.org/W6751150484","https://openalex.org/W6754409819","https://openalex.org/W6754748920","https://openalex.org/W6754842948","https://openalex.org/W6755276765","https://openalex.org/W6759104856","https://openalex.org/W6928872010"],"related_works":["https://openalex.org/W4238897586","https://openalex.org/W435179959","https://openalex.org/W2619091065","https://openalex.org/W2341842940","https://openalex.org/W4362236462","https://openalex.org/W1490753184","https://openalex.org/W2284465472","https://openalex.org/W2291782699","https://openalex.org/W1993948687","https://openalex.org/W2770764537"],"abstract_inverted_index":{"Supplementary":[0],"data":[1],"are":[2],"available":[3],"at":[4],"Bioinformatics":[5],"online.":[6]},"counts_by_year":[{"year":2026,"cited_by_count":2},{"year":2025,"cited_by_count":7},{"year":2024,"cited_by_count":15},{"year":2023,"cited_by_count":16},{"year":2022,"cited_by_count":23},{"year":2021,"cited_by_count":13},{"year":2020,"cited_by_count":40},{"year":2019,"cited_by_count":16}],"updated_date":"2026-03-04T09:10:02.777135","created_date":"2025-10-10T00:00:00"}